Metagenome Family F065951

Basic Information
Family ID	F065951
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	44 residues
Representative Sequence	MPIYEQTYRRYEARAPLRTVRFWPITREALRLILARRAFL
Number of Associated Samples	112
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.80 %
% of genes near scaffold ends (potentially truncated)	97.64 %
% of genes from short scaffolds (< 2000 bps)	91.34 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (51.969 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (10.236 % of family members)
Environment Ontology (ENVO)	Unclassified (29.921 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (28.346 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00005	ABC_tran	48.03
PF14332	DUF4388	0.79
PF00756	Esterase	0.79
PF13304	AAA_21	0.79
PF03951	Gln-synt_N	0.79
PF06724	DUF1206	0.79
PF01596	Methyltransf_3	0.79
PF13522	GATase_6	0.79
PF13732	DUF4162	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	0.79
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.79
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.97 %
Unclassified	root	N/A	48.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.97 %
Unclassified	root	N/A	48.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.97 %
Unclassified	root	N/A	48.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.03 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	33.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.86 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.86 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000443\|F12B_10117388	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300001213\|JGIcombinedJ13530_106172849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300003471\|FeGluNO3_10377797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300004026\|Ga0055443_10145211	Not Available	711	Open in IMG/M
3300004055\|Ga0055480_10395848	Not Available	558	Open in IMG/M
3300004114\|Ga0062593_103433470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300004157\|Ga0062590_100569823	Not Available	986	Open in IMG/M
3300004157\|Ga0062590_102247744	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300004480\|Ga0062592_101182280	Not Available	714	Open in IMG/M
3300004808\|Ga0062381_10426244	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005186\|Ga0066676_10201128	Not Available	1281	Open in IMG/M
3300005295\|Ga0065707_10521057	Not Available	736	Open in IMG/M
3300005345\|Ga0070692_11223749	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005354\|Ga0070675_101182663	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	704	Open in IMG/M
3300005355\|Ga0070671_100548405	Not Available	997	Open in IMG/M
3300005406\|Ga0070703_10507260	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005444\|Ga0070694_101951499	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005445\|Ga0070708_101271575	Not Available	688	Open in IMG/M
3300005447\|Ga0066689_10965734	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005518\|Ga0070699_100638507	Not Available	971	Open in IMG/M
3300005549\|Ga0070704_101305366	Not Available	664	Open in IMG/M
3300005578\|Ga0068854_101475441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300005830\|Ga0074473_10032335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300005836\|Ga0074470_10750225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300006177\|Ga0075362_10776610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300006237\|Ga0097621_101423335	Not Available	657	Open in IMG/M
3300006796\|Ga0066665_10574579	Not Available	912	Open in IMG/M
3300006844\|Ga0075428_102212815	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300006845\|Ga0075421_100656514	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300006969\|Ga0075419_11537356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300009012\|Ga0066710_101169580	Not Available	1191	Open in IMG/M
3300009091\|Ga0102851_13535811	Not Available	502	Open in IMG/M
3300009094\|Ga0111539_10051573	All Organisms → cellular organisms → Bacteria	4900	Open in IMG/M
3300009094\|Ga0111539_13300703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300009100\|Ga0075418_11192274	Not Available	825	Open in IMG/M
3300009100\|Ga0075418_11801544	Not Available	666	Open in IMG/M
3300009100\|Ga0075418_12601237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300009146\|Ga0105091_10061471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300009147\|Ga0114129_13480871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300009788\|Ga0114923_11270786	Not Available	572	Open in IMG/M
3300009812\|Ga0105067_1038398	Not Available	726	Open in IMG/M
3300009815\|Ga0105070_1096554	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300009873\|Ga0131077_11658728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300010360\|Ga0126372_12239604	Not Available	596	Open in IMG/M
3300010360\|Ga0126372_13004254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300010400\|Ga0134122_12476902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300010403\|Ga0134123_10809138	Not Available	932	Open in IMG/M
3300010403\|Ga0134123_11001750	Not Available	851	Open in IMG/M
3300010403\|Ga0134123_11805394	Not Available	665	Open in IMG/M
3300011402\|Ga0137356_1004684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2322	Open in IMG/M
3300012171\|Ga0137342_1032763	Not Available	999	Open in IMG/M
3300012202\|Ga0137363_11420993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300012351\|Ga0137386_10527998	Not Available	850	Open in IMG/M
3300012684\|Ga0136614_10187042	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300012893\|Ga0157284_10258239	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300012899\|Ga0157299_10234397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300012912\|Ga0157306_10024076	Not Available	1335	Open in IMG/M
3300014304\|Ga0075340_1142008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300014324\|Ga0075352_1081525	Not Available	820	Open in IMG/M
3300014881\|Ga0180094_1055734	Not Available	852	Open in IMG/M
3300014885\|Ga0180063_1303786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300015371\|Ga0132258_10503880	All Organisms → cellular organisms → Bacteria	3028	Open in IMG/M
3300018059\|Ga0184615_10564374	Not Available	601	Open in IMG/M
3300018064\|Ga0187773_10406006	Not Available	790	Open in IMG/M
3300018079\|Ga0184627_10279368	Not Available	877	Open in IMG/M
3300018476\|Ga0190274_11435622	Not Available	780	Open in IMG/M
3300019458\|Ga0187892_10558219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300021090\|Ga0210377_10071583	All Organisms → cellular organisms → Bacteria	2359	Open in IMG/M
3300021090\|Ga0210377_10820762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300022213\|Ga0224500_10237098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300022213\|Ga0224500_10387020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300022756\|Ga0222622_11162579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300025312\|Ga0209321_10119672	Not Available	1436	Open in IMG/M
3300025322\|Ga0209641_10211731	Not Available	1453	Open in IMG/M
3300025823\|Ga0210123_1247267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300025923\|Ga0207681_11231950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300025926\|Ga0207659_11868822	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300025981\|Ga0207640_10519911	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300025985\|Ga0210117_1052219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	681	Open in IMG/M
3300026088\|Ga0207641_10969612	Not Available	846	Open in IMG/M
3300026116\|Ga0207674_11232742	Not Available	718	Open in IMG/M
3300026118\|Ga0207675_100320922	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300026118\|Ga0207675_102192524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300026306\|Ga0209468_1131468	Not Available	716	Open in IMG/M
3300026319\|Ga0209647_1048664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2301	Open in IMG/M
3300026324\|Ga0209470_1250939	Not Available	709	Open in IMG/M
3300026328\|Ga0209802_1047248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2152	Open in IMG/M
3300026357\|Ga0256810_1027245	Not Available	739	Open in IMG/M
3300027871\|Ga0209397_10456641	Not Available	631	Open in IMG/M
3300027880\|Ga0209481_10748130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300027907\|Ga0207428_10044641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3575	Open in IMG/M
3300028380\|Ga0268265_11001235	Not Available	825	Open in IMG/M
3300028381\|Ga0268264_12076167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300028791\|Ga0307290_10104537	Not Available	1033	Open in IMG/M
3300028793\|Ga0307299_10247230	Not Available	670	Open in IMG/M
3300028870\|Ga0302254_10035610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1772	Open in IMG/M
3300031728\|Ga0316578_10063354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2181	Open in IMG/M
3300031873\|Ga0315297_10690524	Not Available	855	Open in IMG/M
3300031873\|Ga0315297_11485839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300031908\|Ga0310900_10107316	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300032012\|Ga0310902_11194813	Not Available	535	Open in IMG/M
3300032251\|Ga0316198_10238801	Not Available	1042	Open in IMG/M
3300032251\|Ga0316198_10625148	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300032263\|Ga0316195_10613319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300032782\|Ga0335082_10403615	Not Available	1231	Open in IMG/M
3300032829\|Ga0335070_11700204	Not Available	572	Open in IMG/M
3300032955\|Ga0335076_11752067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300033004\|Ga0335084_10734020	Not Available	1005	Open in IMG/M
3300033413\|Ga0316603_11058168	Not Available	767	Open in IMG/M
3300033416\|Ga0316622_101320753	Not Available	843	Open in IMG/M
3300033416\|Ga0316622_103191664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300033429\|Ga0316193_10045048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3429	Open in IMG/M
3300033481\|Ga0316600_10393999	Not Available	949	Open in IMG/M
3300033481\|Ga0316600_10574561	Not Available	787	Open in IMG/M
3300033482\|Ga0316627_101237970	Not Available	740	Open in IMG/M
3300033482\|Ga0316627_102632411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300033486\|Ga0316624_10821077	Not Available	827	Open in IMG/M
3300033489\|Ga0299912_10843347	Not Available	697	Open in IMG/M
3300033803\|Ga0314862_0183794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300033811\|Ga0364924_082692	Not Available	714	Open in IMG/M
3300034081\|Ga0373911_036110	Not Available	836	Open in IMG/M
3300034099\|Ga0373902_056975	Not Available	826	Open in IMG/M
3300034147\|Ga0364925_0094444	Not Available	1056	Open in IMG/M
3300034149\|Ga0364929_0365318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300034165\|Ga0364942_0214819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.38%
Host-Associated	Host-Associated	21.26%
Engineered	Engineered	2.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.97%
Aquatic	Environmental → Aquatic	24.41%
Plants	Host-Associated → Plants	21.26%
Bioremediation	Engineered → Bioremediation	1.57%
Wastewater	Engineered → Wastewater	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.60%
Marine	Environmental → Aquatic → Marine	9.45%
Freshwater	Environmental → Aquatic → Freshwater	7.87%
Sediment	Environmental → Aquatic → Sediment	7.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.09%
Floodplain	Environmental → Terrestrial → Floodplain	3.15%
Peat	Environmental → Terrestrial → Peat	1.57%
Roots	Host-Associated → Plants → Roots	1.57%
Metal	Engineered → Bioremediation → Metal	1.57%
Cave	Environmental → Terrestrial → Cave	0.79%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.09%
Loam	Environmental → Terrestrial → Soil → Loam	6.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.30%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.15%
Coastal	Environmental → Aquatic → Marine → Coastal	3.15%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.15%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.15%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.36%
Lake	Environmental → Aquatic → Freshwater → Lake	1.57%
Sediment	Environmental → Aquatic → Marine → Sediment	1.57%
Sand	Environmental → Terrestrial → Soil → Sand	1.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.57%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.57%
Ice	Environmental → Aquatic → Freshwater → Ice	0.79%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.15%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	3.15%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.15%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.15%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.57%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.57%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.79%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.79%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.79%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.24%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	3.15%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.15%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.15%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.15%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.57%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.57%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.57%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.57%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.57%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.57%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.79%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.79%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.79%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.79%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.79%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.79%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Wetland Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Wetland Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.79%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.79%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003471	Fe-reducing enrichment culture from wetland. Sample 5 with periodic nitrate additions.	Environmental	Open in IMG/M
3300004026	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2	Environmental	Open in IMG/M
3300004055	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009788	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300014304	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022213	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025823	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025985	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026357	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PU5	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031728	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC	Host-Associated	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032251	Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxic	Environmental	Open in IMG/M
3300032263	Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033429	Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300034081	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.3	Engineered	Open in IMG/M
3300034099	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3	Engineered	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F12B_101173882	3300000443	Soil	MPIYEQTYRKYEAREPLRTVRFWPITREALRLILSKR
JGIcombinedJ13530_1061728491	3300001213	Wetland	MPIYDQGYRRREGRGPLRSVRFWPITREALRLILARRAFLALLA
FeGluNO3_103777972	3300003471	Wetland Sediment	MPIYDQGYRRYVARAPLHRARFWPITREALRLVLAKRAFLGLL
Ga0055443_101452112	3300004026	Natural And Restored Wetlands	MPIYDQGYRRYEARGPLRQVRFWPITREALRMILSKRAFLGL
Ga0055480_103958482	3300004055	Natural And Restored Wetlands	MPVYEQSYRSHEARAPIRQVRFWPILREGLRLLLARKALL
Ga0062593_1034334701	3300004114	Soil	MPIYEQSYRRYEARAPLRRVRFWPITREALRLILAKRAFLGLLALSWLPFLGF
Ga0062590_1005698231	3300004157	Soil	MPIYDQTYRRYEARGPLRTLRFWPITREGLRLVLVRRWFVALVAAAWVPFLVQVI
Ga0062590_1022477442	3300004157	Soil	MPIYEQSYRRHEARGALRRVRFWPITREALRLLLARRLFLMLLF
Ga0062592_1011822801	3300004480	Soil	VPIYDQSYRRYEAREALRRVRFWPITREALRLILAKRAFLGL
Ga0062381_104262441	3300004808	Wetland Sediment	MPIYEQGYRRWEARGPLSRVRFWPITREALRTVLSRRPFLLLLFASFIPFLVRVAQ
Ga0066676_102011283	3300005186	Soil	VPIYEQTYRRHEARGPLRRVRFWPITREALRLILARRAFLILLMMSWLPFV
Ga0065707_105210572	3300005295	Switchgrass Rhizosphere	MPIYDQGYRRYEARGPLRKARFWPITREALRLVLVKRWFLALLTA
Ga0070692_112237492	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPIYEQTYRRYEARAPLRTVRFWPITREALRLILARRAFLGLLLVAWGQFLF
Ga0070675_1011826632	3300005354	Miscanthus Rhizosphere	MPIYDQTYRRYEARGPLRALRFWPITREALRLVLVRRWFLALLAAAW
Ga0070671_1005484052	3300005355	Switchgrass Rhizosphere	MPIYEQTYRRYEARAPLRAVRFWPITREALRLILARRAFLGLLLVAWGQFLFRV
Ga0070703_105072601	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VPIYEQTYRRHEARGPLRRVRFWPITREALRLILARRAFLILLMMSWVPF
Ga0070694_1019514992	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPIYEQTYRRYEARAPLRTVRFWPITREALRLILARRAFL
Ga0070708_1012715752	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPIYEQTYRRHEARGALRRVRFWPITREALRLILARRWFL
Ga0066689_109657342	3300005447	Soil	MPIYEQTYRRHEARGPLRRVRFWPITREALRLILARRWFLALLA
Ga0070699_1006385072	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LPIYEQTYRRHEARGPLRRVRFWPITREALRLILARRWFLA
Ga0070704_1013053662	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPIYEQTYRRYEAREPLRQLRFWPITREGLRLILAKRAFLILLIVA
Ga0068854_1014754412	3300005578	Corn Rhizosphere	MPIYEQTYRRYEARAPLRTVRFWPITREALRLILARRAF
Ga0074473_100323352	3300005830	Sediment (Intertidal)	MPIYDQTYRKYDAREPLRSVRFWPIPREALRLHLM
Ga0074470_107502252	3300005836	Sediment (Intertidal)	MPIYEQAYRKYEAREGPRQVRFWPITREALRLVLAKRAFI
Ga0075362_107766102	3300006177	Populus Endosphere	VPIYDRTYRRHEARGPLRRVRFWPITREALRLVLARRAFLALLAASWIPFLVRVVQI
Ga0097621_1014233351	3300006237	Miscanthus Rhizosphere	MPIYEQTYRRYEARAPLRAVRFWPITREALRLILARRAF
Ga0066665_105745791	3300006796	Soil	VPIYEQTYRKHEARGPLRRVRSWPITREALRLILARRAFLALLVFSWLPCV
Ga0075428_1022128151	3300006844	Populus Rhizosphere	MPIYEQTYRRYQAREPLRRFRFWPITREVLRTLLAKRAF
Ga0075421_1006565143	3300006845	Populus Rhizosphere	MPIYEQTYRRYEARAPLRRLRFWPITREALRLILAKRAFLGLLLLCWLP
Ga0075419_115373561	3300006969	Populus Rhizosphere	MPVYDQGYRRHQARRPLRALRFWPITREALRLLLRRWTLLGLLVLA
Ga0066710_1011695803	3300009012	Grasslands Soil	MPIYDQGYRPYEARQPLRTLRFWPITREALRLLLARRAFLILLA
Ga0102851_135358112	3300009091	Freshwater Wetlands	MPVYDQGYRRYEARHPLRTVRFWPIVREALRGLFTRKAFLAL
Ga0111539_100515731	3300009094	Populus Rhizosphere	MPIYDQTYRRYEARGPLRALRFWPITREALRLVLVRRWFLALLA
Ga0111539_133007032	3300009094	Populus Rhizosphere	MPIYDQGYRRYEARGPLRKARFWPITREALRLVLSKRAFLGLLLAGFI
Ga0075418_111922741	3300009100	Populus Rhizosphere	LPIYDQTYRRYEARAPLRRARFWPITREALRLILARRWFLALLVAAWVPFVV
Ga0075418_118015441	3300009100	Populus Rhizosphere	MPIYEQAYRKYEARAEARAIRFWPITREALRLVLSRRAFIGLMVVGF
Ga0075418_126012372	3300009100	Populus Rhizosphere	MPIYDQTYRRYEARGALRPIRFWPITREALRLILA
Ga0105091_100614714	3300009146	Freshwater Sediment	MPIYDQGYRHYQARSPLHKARFWPITREALRLVLMKRAFLGLIAA
Ga0114129_134808712	3300009147	Populus Rhizosphere	VPIYQQGYRPYQARGPLRGVRFWPITREALRLILARRAFLGLLVLSW
Ga0114923_112707861	3300009788	Deep Subsurface	MPIYEQSYRRHEARAPLRSVRFWPITREALRLILVKRAFLGLLAMGWLPAGCCTASPWPS
Ga0105067_10383981	3300009812	Groundwater Sand	MPIYEQAYRKYEARAPLRQVRFWPITREALRLVLAKRAFIVLLLACLIPFVVRVVQI
Ga0105070_10965541	3300009815	Groundwater Sand	MPIYEQAYRKYEARAPLRQVRFWPITREALRLVLAKRAFIVL
Ga0131077_116587282	3300009873	Wastewater	MPVYDQGYRRYEARHPLRRVRFWPIVREALRGLVTRKAFLA
Ga0126372_122396042	3300010360	Tropical Forest Soil	MPIYEQTYRKYEARAPLRQIRFWPITREALRLVLAPRLFLVLLLASYLPF
Ga0126372_130042542	3300010360	Tropical Forest Soil	VPIYEQTYRRYEARGPLRALRFWPITREALRILLARRAFL
Ga0134122_124769022	3300010400	Terrestrial Soil	MPIYEQSYRRYEARQPLRRVRFWTITREALRLVLVRRMFLALLAVAWLPFVGYVPFSE
Ga0134123_108091381	3300010403	Terrestrial Soil	MPIYDQVYRRYEARGPLRALRFWPITREGLRLVLVRRWFLALLAAAWV
Ga0134123_110017501	3300010403	Terrestrial Soil	VPIYEQTYRRHEARGPLRRVRFWPITREALRLILARRAFLILLMMS
Ga0134123_118053942	3300010403	Terrestrial Soil	VPIYEQSYRRYEARGPLRTVRFWPIAREALRHVLAKRAFLGLLAL
Ga0137356_10046843	3300011402	Soil	MPIYDQGYRRYEARSPLHQTRFWPITHEALRLVLAKRAFLRLLAVSFLPFV
Ga0137342_10327631	3300012171	Soil	MPIYEQAYRKYEARSPLRAVRFWPITREALRLILAKRAFIGLLIGAWIP
Ga0137363_114209932	3300012202	Vadose Zone Soil	MPIYEQSYRRYEARGPLRTVRFWPITREALRLILSRKAFLVLLMIAWTPFLWRVI
Ga0137386_105279982	3300012351	Vadose Zone Soil	LPIYDQSYRRHEARGPLRRARFWPITREALRLILARRAFLILLMMSWLPFAMRL
Ga0136614_101870423	3300012684	Polar Desert Sand	MPIYDQSYRRYEAREPLRKVRFWPITREALRLILARRALLGLL
Ga0157284_102582391	3300012893	Soil	MPIYEQTYRRYEARAPLRAVRFWPITREALRLILARRAFLGLLL
Ga0157299_102343972	3300012899	Soil	MPIYDQTYRRYEARGPLRALRFWPITREALRLVLVRR
Ga0157306_100240761	3300012912	Soil	MPIYEQTYRRYEARAPLRTVRFWPITREALRLILARRAFLGLLLVAWGQF
Ga0075340_11420081	3300014304	Natural And Restored Wetlands	MPIYDQGYRRYVARSPLHRVRFWPITREALRLVLAKRAFLGLLAA
Ga0075352_10815252	3300014324	Natural And Restored Wetlands	MPIYDQTYRRHEARAPLRSVRFWPITREALRLLLQKR
Ga0180094_10557341	3300014881	Soil	MPIYEQAYRKYEARSPLRTVRFWPITREALRLILVNRA
Ga0180063_13037861	3300014885	Soil	MPIYDQSYRKHLARGPLRQLRFWPIAREGLRLVLVKRAFLVLLGFSFIPF
Ga0132258_105038801	3300015371	Arabidopsis Rhizosphere	MPIYEQSYRRYEARAPLRRVRFWPITREALRLILAKRAFL
Ga0184615_105643741	3300018059	Groundwater Sediment	LPIYEQSYRRYEAREPLRTIRFWPIAREALVHVLAKRAFLGLLALSWLPF
Ga0187773_104060061	3300018064	Tropical Peatland	MPIYDQGYRKYEARGPLRKARFWPITREALRLILVKRAFL
Ga0184627_102793681	3300018079	Groundwater Sediment	MPIYDQAYRRWEARGPLRRVRFWPITRESLRLILSKRAFL
Ga0190274_114356221	3300018476	Soil	MPVYEQTYRRYEARQPLRTVRFWPITREALRLLLSKWAFLGLVILCWVPFLAFAIYVW
Ga0187892_105582192	3300019458	Bio-Ooze	MPIYEQTYRRYEARAPLTRFRFWPITREALRLVLMKRAFLGLLAVSFLPFLFQVGWVYVV
Ga0210377_100715831	3300021090	Groundwater Sediment	MPIYDQGYRRYEARAPLRKARFWPITREALRLVLS
Ga0210377_108207621	3300021090	Groundwater Sediment	MPIYDQTYRKYDARGPLRSVRFWPITREGLRLLLAKKAFLALWAACWLPFIGFVI
Ga0224500_102370981	3300022213	Sediment	MPIYDQGYRRYEARSPLHQIRFWPITREALRLILAKRAFLFLLAPPLIVFLFYVG
Ga0224500_103870202	3300022213	Sediment	MPIYDQGYRRYEARAPLRTARFWPITREALRMVLQKRAFLGLLAAAF
Ga0222622_111625792	3300022756	Groundwater Sediment	MPIYDQTYRRYEARGPLRRLRFWPITREALRLVLARRWFLALLVA
Ga0209321_101196721	3300025312	Soil	MPIYDQGYRRYEARAPLRRLRFWPITREALRLILAK
Ga0209641_102117311	3300025322	Soil	MPIYDQGYRRYEARAPLRKARFWPITREALRLVLSKRAFLGLIAAAFL
Ga0210123_12472671	3300025823	Natural And Restored Wetlands	MPVYEQSYRSHEARAPIRQVRFWPILREGLRLLLARKAL
Ga0207681_112319502	3300025923	Switchgrass Rhizosphere	MPIYDQTYRRYEARGPLRALRFWPITREGLRLVLVRRWFLALLAAAW
Ga0207659_118688222	3300025926	Miscanthus Rhizosphere	MPIYEQTYRRYEARAPLRTVRFWPITREALRLILARRA
Ga0207640_105199113	3300025981	Corn Rhizosphere	MPIYEQTYRRYEARAPLRTVRFWPITREALRLILARRVF
Ga0210117_10522192	3300025985	Natural And Restored Wetlands	MPIYEQAYRRYEARGPLRRLRFWPITREALRLLLAGRWF
Ga0207641_109696121	3300026088	Switchgrass Rhizosphere	MPIYEQSYRRWEARGPLREARFLPITREALRLILSRRAFLL
Ga0207674_112327421	3300026116	Corn Rhizosphere	MPIYEQTYRRYEARAPLRTVRFWPITREALRLILARRVFLGLLLVAWVPVLWQ
Ga0207675_1003209221	3300026118	Switchgrass Rhizosphere	MPIYEQAYRRWESRGPLRQIRFLPITREALRLILARR
Ga0207675_1021925242	3300026118	Switchgrass Rhizosphere	MPIYEQTYRRYEARAPLRRLRFWPITREALRLILAKRAFLGLLLLC
Ga0209468_11314681	3300026306	Soil	LPIYEQTYRRHEARGALRRVRFWPITREALRLILA
Ga0209647_10486644	3300026319	Grasslands Soil	MPIYEQTYRRYEARAPLRTLRFWPITREALRLILARRAFMGLLLVAWGQFLV
Ga0209470_12509391	3300026324	Soil	VPIYEQTYRRHEARGPLRRVRFWPITREALRLILARRA
Ga0209802_10472481	3300026328	Soil	MPIYEQTYRRYEARGPLRTVRFWPITREALRLVLAR
Ga0256810_10272451	3300026357	Sediment	MPIYDQGYRRYQARAPLRKARFWPITREALRLVLARRWFLILMSI
Ga0209397_104566412	3300027871	Wetland	MPIYDQGYRRYEARSPLHQVRFWPITREALRMVLAK
Ga0209481_107481302	3300027880	Populus Rhizosphere	MPIYDQGYRRYEARAPLRKARFWPITREALRLVLLRRWFLGL
Ga0207428_100446414	3300027907	Populus Rhizosphere	MPIYEQSYRRWEARGPLRAARFLPITREALRLLLA
Ga0268265_110012351	3300028380	Switchgrass Rhizosphere	MPIYEQTYRRYEARAPLRTVRFWPITREALRLILARRAFLGLLL
Ga0268264_120761672	3300028381	Switchgrass Rhizosphere	MPIYDQTYRRYEARGPLRALRFWPITREALRLVLVRRWFLALLAAAWLPF
Ga0307290_101045371	3300028791	Soil	LPIYEQTYRRHEARGALRRVRFWPITREALRLILARR
Ga0307299_102472301	3300028793	Soil	LPIYEQTYRRHEARGALRRVRFWPITREALRLILARRWFLE
Ga0302254_100356101	3300028870	Fen	MPIYEQGYRRYVARAALHTTRFWPITREALRLLLQKRLFT
Ga0311350_118451441	3300030002	Fen	MPIYEQGYRRYVARAALHTTRFWPITREALRLLLQKRLFTLFLLGSLSPLAV
Ga0316578_100633543	3300031728	Rhizosphere	MPIYDQGYRRYEAREALRQIRFWPITREALKLILSKRAF
Ga0315297_106905242	3300031873	Sediment	MPIYDQGYRRYEARAPLRKARFWPITREALRLVLSKRAFLGLIAAAFLP
Ga0315297_114858392	3300031873	Sediment	MPIYDQGYRRYEARSPLHQVRFWPITREALRLILAKRAFLGLL
Ga0310900_101073161	3300031908	Soil	MPIYEQSYRRWEARGPLRAARFLPITREALRLLLARKAFLLLLIAA
Ga0310902_111948131	3300032012	Soil	MPIYEQAYRKYEARAEARAIRFWPITREALRLVLS
Ga0316198_102388012	3300032251	Sediment	MPIHDQSYRRYEARGPLRSVRFWPITREALRLILVR
Ga0316198_106251482	3300032251	Sediment	MPIYDQGYRRYEARGALRQVRFWPITREALRLILSKRAFLGL
Ga0316195_106133191	3300032263	Sediment	MPIYDQGYRRYEARGPLRQVRFWPITREALRMILSKRAFLG
Ga0335082_104036152	3300032782	Soil	MPIYDQGYRRYVARSPLQAARFWPITREALRMILSKRAF
Ga0335070_117002041	3300032829	Soil	MPIYDQGYRRYEARSPLHQIRFWPITREALRMILLKRAFLALIAVSFVPFLV
Ga0335076_117520672	3300032955	Soil	MPIYDQAYRKYEAREAARRVRFWPITREALRLVLAKR
Ga0335084_107340201	3300033004	Soil	MPIYDQGYRRYEARQPLRRARFWPITREAMRIILAKRWFLVLLA
Ga0316603_110581681	3300033413	Soil	MPIYDQGYRRYEARGPLHQIRFWPITREALRLILAKRAFLSL
Ga0316622_1013207532	3300033416	Soil	MPIYDQGYRRYEARGPLRTLRFWPITREALRLVLSR
Ga0316622_1031916642	3300033416	Soil	MPIYDQGYRRYLARSPLHKARFWPITREALRLVLAKRAFLGLL
Ga0316193_100450481	3300033429	Sediment	MPIYDQGYRRYEAREPLHQLRFWPITREALRLVLAKRAFLGLLAVSFLP
Ga0316600_103939992	3300033481	Soil	MPIYDQGYRHYEARSPLHRARFWPITREALRLILAKRAFLG
Ga0316600_105745611	3300033481	Soil	MPIYDQGYRRYVARSPLHRLRFWPITREALRSFAQRRFFVM
Ga0316627_1012379701	3300033482	Soil	MPIYDQGYRRYEARAPLRKARFWPITREALRLVLSKRAFLG
Ga0316627_1026324111	3300033482	Soil	MPIYDQGYRRYEARSPLHQIRFWPITREALRLILA
Ga0316624_108210771	3300033486	Soil	MPIYDQGYRRYEARGPLHQIRFWPITREALRLILAK
Ga0316621_114264491	3300033488	Soil	MPIYDQGYRRYEARGPLHQIRFWPITREALRLILAKRAFLSLLAPPLAVLLFYVGR
Ga0299912_108433472	3300033489	Soil	MPIYDRGYRRYEARAPLHQIRFWPITREALRMILAKRAFLILLAVSFLPF
Ga0314862_0183794_402_515	3300033803	Peatland	MPVYDQSYRRYQARRPLRDLRFWPITREALRMILNRRA
Ga0364924_082692_597_713	3300033811	Sediment	MPIYEQTYRRHQERAPLRKTRFWPITREALRLLLSRKIF
Ga0373911_036110_710_835	3300034081	Sediment Slurry	MPIYDQGYRRYEARGPLHQIRFWPITREALRLILAKRAFLGL
Ga0373902_056975_1_126	3300034099	Sediment Slurry	MPIYDQGYRRYEARAPLHQIRFWPITREALRMILLKRAFLAL
Ga0364925_0094444_947_1054	3300034147	Sediment	MPIYDQGYRRYEARSPLHRARFWPITREALRLILAK
Ga0364929_0365318_391_501	3300034149	Sediment	MPIYDQGYRRYVARLPLHKARFWPITREALRLILAKR
Ga0364942_0214819_2_169	3300034165	Sediment	MPIYDQGYRRYEARAPLRKARFWPITREALRLVLLRRWFLGLVAGAFVPFIIRVGQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065951

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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