Metagenome Family F065850

Basic Information
Family ID	F065850
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	49 residues
Representative Sequence	MKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDVKEFNRIESLVNKRVRW
Number of Associated Samples	94
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.14 %
% of genes near scaffold ends (potentially truncated)	97.64 %
% of genes from short scaffolds (< 2000 bps)	96.85 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (91.339 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (38.583 % of family members)
Environment Ontology (ENVO)	Unclassified (94.488 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (75.591 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 1LPaug08P261000mDRAFT_10290271 2LPjun09P202000mDRAFT_10109091 3LPjun09P12500mDRAFT_10131801 4GBIDBA_1001995310 5Ga0066855_102129601 6Ga0066839_103408303 7Ga0066383_102263712 8Ga0066383_102278431 9Ga0066369_102972081 10Ga0066382_102697291 11Ga0066382_103560481 12Ga0081592_10576153 13Ga0068477_10091183 14Ga0068488_11824901 15Ga0068482_14814524 16Ga0068482_17001933 17Ga0068482_18501212 18Ga0068503_104516341 19Ga0068503_106288844 20Ga0068493_105231152 21Ga0068493_112240692 22Ga0099957_11708173 23Ga0098044_11484063 24Ga0066376_106780793 25Ga0066376_107718112 26Ga0066372_104487423 27Ga0066372_105746623 28Ga0075444_103726981 29Ga0066367_11371823 30Ga0114996_102934681 31Ga0114996_106850105 32Ga0114996_111723003 33Ga0114993_102337616 34Ga0114908_11251311 35Ga0114994_106842473 36Ga0114998_102220491 37Ga0114998_104459713 38Ga0114997_104009293 39Ga0114915_12244991 40Ga0115007_107320923 41Ga0115004_104999771 42Ga0115004_105216291 43Ga0105236_10333243 44Ga0115000_101024667 45Ga0115000_103666031 46Ga0115002_106984631 47Ga0115002_108414354 48Ga0115002_109208491 49Ga0114999_102949541 50Ga0114999_110255423 51Ga0098047_103048493 52Ga0151669_1624451 53Ga0163108_106469333 54Ga0163179_113027723 55Ga0181427_11538001 56Ga0181432_12566472 57Ga0181432_12893223 58Ga0211685_10131073 59Ga0211679_10652734 60Ga0211629_11042381 61Ga0211697_100984971 62Ga0206683_102107661 63Ga0233437_11699411 64Ga0233437_13386271 65Ga0209644_11287022 66Ga0209337_12598593 67Ga0208837_10443811 68Ga0209556_11239781 69Ga0209774_10146059 70Ga0209361_11490281 71Ga0209558_12137551 72Ga0209362_12939352 73Ga0208747_10964372 74Ga0207963_11278101 75Ga0208113_10306321 76Ga0208113_10799731 77Ga0208764_105039691 78Ga0209384_10301551 79Ga0209710_11796001 80Ga0209816_11708284 81Ga0209709_102391461 82Ga0209709_104409021 83Ga0209502_102679184 84Ga0209711_100780011 85Ga0209711_104238753 86Ga0209091_101945231 87Ga0209090_102514082 88Ga0209501_105352943 89Ga0257122_10479474 90Ga0257127_10545561 91Ga0257108_10917611 92Ga0257121_10498271 93Ga0257119_10678771 94Ga0257113_11111931 95Ga0257113_11218383 96Ga0257113_11245082 97Ga0257113_12425813 98Ga0257112_102556013 99Ga0257111_11053374 100Ga0308022_10423245 101Ga0308025_11502875 102Ga0307488_101309191 103Ga0308019_100031391 104Ga0308019_102489861 105Ga0302123_103045531 106Ga0308001_103505033 107Ga0307986_103930912 108Ga0308017_10909651 109Ga0308013_1000635216 110Ga0315332_109894051 111Ga0310121_104074501 112Ga0310121_104823464 113Ga0310121_106227521 114Ga0310123_101326297 115Ga0310123_101619044 116Ga0310123_106394711 117Ga0310124_103732531 118Ga0315316_103826995 119Ga0315324_100983391 120Ga0315329_104881953 121Ga0315329_105485364 122Ga0315329_106652463 123Ga0310345_103455201 124Ga0310345_105524995 125Ga0310345_116101501 126Ga0315334_115876011 127Ga0310342_1025398061
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 1LPaug08P261000mDRAFT_10290271 2LPjun09P12500mDRAFT_10131801 3GBIDBA_1001995310 4Ga0068488_11824901 5Ga0068503_106288844 6Ga0066372_104487423 7Ga0066372_105746623 8Ga0115007_107320923 9Ga0115004_104999771 10Ga0257113_12425813
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 1LPaug08P261000mDRAFT_10290271 2LPjun09P12500mDRAFT_10131801 3GBIDBA_1001995310 4Ga0068488_11824901 5Ga0068503_106288844 6Ga0066372_104487423 7Ga0066372_105746623 8Ga0115007_107320923 9Ga0115004_104999771 10Ga0257113_12425813
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.00% β-sheet: 6.00% Coil/Unstructured: 40.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF02086	MethyltransfD12	4.72
PF01555	N6_N4_Mtase	1.57
PF01564	Spermine_synth	1.57
PF04820	Trp_halogenase	0.79
PF02511	Thy1	0.79
PF13177	DNA_pol3_delta2	0.79
PF00012	HSP70	0.79
PF01180	DHO_dh	0.79
PF13412	HTH_24	0.79
PF13649	Methyltransf_25	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	4.72
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	4.72
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.57
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.57
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.57
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.79
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.79
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	0.79
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	7.87 %
Unclassified	root	N/A	91.34 %
unclassified Hyphomonas	no rank	unclassified Hyphomonas	0.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	5.51 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.79 %
Unclassified	root	N/A	91.34 %
Viruses	superkingdom	All Organisms → Viruses	2.36 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.72 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Unclassified	root	N/A	91.34 %

Name	Rank	Taxonomy	Distribution
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.15 %
Unclassified	root	N/A	91.34 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.15 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.79 %
Unclassified	root	N/A	91.34 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.79 %

Name	Rank	Taxonomy	Distribution
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.79 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	0.79 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
Unclassified	root	N/A	91.34 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.15 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.15 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.79 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
Puniceicoccales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales	0.79 %
Unclassified	root	N/A	91.34 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.15 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
Puniceicoccaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae	0.79 %
Unclassified	root	N/A	91.34 %
unclassified Nitrososphaerales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales	0.79 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.15 %
Coraliomargarita	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Coraliomargarita	0.79 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.79 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
Unclassified	root	N/A	91.34 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.15 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Coraliomargarita → environmental samples	0.79 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.79 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
Unclassified	root	N/A	91.34 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.15 %
Coraliomargarita sp. CAG:312	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Coraliomargarita → environmental samples → Coraliomargarita sp. CAG:312	0.79 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.79 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
Unclassified	root	N/A	91.34 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300024259\|Ga0233437_1169941	Not Available	965	Open in IMG/M
(restricted) 3300024259\|Ga0233437_1338627	Not Available	568	Open in IMG/M
3300000157\|LPaug08P261000mDRAFT_c1029027	Not Available	755	Open in IMG/M
3300000218\|LPjun09P202000mDRAFT_c1010909	Not Available	712	Open in IMG/M
3300000222\|LPjun09P12500mDRAFT_1013180	Not Available	1796	Open in IMG/M
3300001683\|GBIDBA_10019953	Not Available	8076	Open in IMG/M
3300005402\|Ga0066855_10212960	Not Available	628	Open in IMG/M
3300005594\|Ga0066839_10340830	Not Available	518	Open in IMG/M
3300005953\|Ga0066383_10226371	Not Available	552	Open in IMG/M
3300005953\|Ga0066383_10227843	Not Available	550	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	1.57%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.57%
Inlet	Environmental → Aquatic → Marine → Inlet	4.72%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.24%
Oceanic	Environmental → Aquatic → Marine → Oceanic	67.72%
Strait	Environmental → Aquatic → Marine → Strait	2.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.81%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	7.87%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.79%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.15%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	56.69%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.81%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	10.24%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.36%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	0.79%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.79%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	38.58%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	11.02%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	7.87%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.30%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.51%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	3.15%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	3.94%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	2.36%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.79%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.79%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.79%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	6.30%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.15%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.36%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.57%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.79%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.79%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000157	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 1000m	Environmental	Open in IMG/M
3300000218	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P20 2000m	Environmental	Open in IMG/M
3300000222	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500m	Environmental	Open in IMG/M
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental	Open in IMG/M
3300005594	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82	Environmental	Open in IMG/M
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental	Open in IMG/M
3300005969	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
LPaug08P261000mDRAFT_10290271	3300000157	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDVKDFNR
LPjun09P202000mDRAFT_10109091	3300000218	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDRTSEMDVKEFNRIESLVNKRV
LPjun09P12500mDRAFT_10131801	3300000222	Marine	MSLHNMKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIESLVRKRVRWEL
GBIDBA_1001995310	3300001683	Hydrothermal Vent Plume	MKIKSKKQFWWRLNHLKRNGGEITVTDRTPEMNVREFNRIELLVNKRVRWEIGSEGMAIK
Ga0066855_102129601	3300005402	Marine	LKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDVKEFNRIELLVNKRVRWEIGSEGMAIW
Ga0066839_103408303	3300005594	Marine	MKIKSKKHFWWRFNHLKRNGGEITVTDRTPEMDVKDFNRIELLVNKRVRWEIGSEGMA
Ga0066383_102263712	3300005953	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDVKEFNRIESLVNKRVRW
Ga0066383_102278431	3300005953	Marine	MKIVSTKQFWWRLNYLKRNGGEITVTDRTSEMDVK
Ga0066369_102972081	3300005969	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDRTSEMDVKEFNRIESLVNK
Ga0066382_102697291	3300006013	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDKTPEMDVKEFNRIELLVNKRVRWEIGS
Ga0066382_103560481	3300006013	Marine	LKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIESLVNKRVRWELGSEGYSIW
Ga0081592_10576153	3300006076	Diffuse Hydrothermal Fluids	MKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDVKDFNRIELLVNKRVRWEIGSEGMA
Ga0068477_10091183	3300006326	Marine	LKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIES
Ga0068488_11824901	3300006331	Marine	MKKGLIMKIKSTKQFWWRLNHLKRNGGEITVTDRTTEMDVNAFNRISLAVNRRVRWELGSEGFAIWNA
Ga0068482_14814524	3300006338	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTTEMDVNAFNKISL
Ga0068482_17001933	3300006338	Marine	LKIKSTKQFWWRLNHLKRNGGEITVTDRTSEMDVNA
Ga0068482_18501212	3300006338	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDVKEFNRIESLVNKRVRWELGSEGYSIW
Ga0068503_104516341	3300006340	Marine	MKIKSNKQFWWRLNHLKRNGGEITVTDRTPEMDVKEFNRIELLVN
Ga0068503_106288844	3300006340	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIESLVNKRVRWELGSEGYSIWSNVDIKTYPL*
Ga0068493_105231152	3300006341	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKDFNRIELLVNKRVRWEIGSEGM*
Ga0068493_112240692	3300006341	Marine	LKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDMKDFNRIELLV
Ga0099957_11708173	3300006414	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFN
Ga0098044_11484063	3300006754	Marine	MKIKSTKQFWWRFNHLKQNGGEITVTDRTPEMDVKEFNRIESLVRKRVRWELGSEG
Ga0066376_106780793	3300006900	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDRTSEMDVKEFNRI
Ga0066376_107718112	3300006900	Marine	MKIKSTKQFWWRLNHLKKNGGEITVTDRTSEMDVKDFNRIELLVNKRVRWEI
Ga0066372_104487423	3300006902	Marine	MKIKSTKQFWWRFNHLKRNGAEITVTDRTRPFDLKEWNRIESL
Ga0066372_105746623	3300006902	Marine	MKIKSTKQFWWRFNYLKRNGGEITVTDRTRPFDLKEWNRIESLVNKRVRWELGSEGYS
Ga0075444_103726981	3300006947	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTSEMDVN
Ga0066367_11371823	3300007291	Marine	MKIVSTKQFWWRFNHLKRNGGEIIVTDRTPEMDVKDFNRIELLVNKRVRWEIGSEGMEIW
Ga0114996_102934681	3300009173	Marine	MKIVSTKQFWWRFNYLKRNGGVITVTDRTSEMDVKEYNRIELLVNKRVRWE
Ga0114996_106850105	3300009173	Marine	MKIVSTKQFWWRFNHLKRNGGEIIVTDKTPEMDVKDFNRIELLVNKRVRWEIGSEGMA
Ga0114996_111723003	3300009173	Marine	MKIVSTKQFWWRLNDLKRKGGEIIVTDRTPEMDVKEYNRVESLVNKRVRWELGSEDYMKW
Ga0114993_102337616	3300009409	Marine	MKIVSTKQFWWRFNHLKRNGGEIIVTDKTPEMDVKDFNRIELLVNKRVRWEIGSEGMAIW
Ga0114908_11251311	3300009418	Deep Ocean	MKIVSTKQFWWRFNYLKRNGGEITVTDRTRPFDLKEWNRIESLVNK
Ga0114994_106842473	3300009420	Marine	MKIVSTKQFWWRLNYLKRNGGEITVTDRTPEMDVKDYNRIELLVNKRVRWELGSEDYMKW
Ga0114998_102220491	3300009422	Marine	MKIVSTKQFWWRFNYLKRNGAEITVTDRTPEMDVKEYNRVESLVNKRVRWELGSED
Ga0114998_104459713	3300009422	Marine	MSLHNMKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIESLVRKRVRWELGSEGMAIW
Ga0114997_104009293	3300009425	Marine	MKIVSTKQFWWRFNYLKRNGGVITVTDRTSEMDVKEYNRIELLVNKRVRWELGSE
Ga0114915_12244991	3300009428	Deep Ocean	MKIVSTKQFWWRFNSLKRNGGEILVTDRTPEMDVKEYNRVE
Ga0115007_107320923	3300009441	Marine	MKIVSTKQFWWRFNDLRKNGGVITVTDRTSEMDVKEYNRIELLV
Ga0115004_104999771	3300009526	Marine	MKIVSTKQFWWRLNDLKRKGGEIIVTDRTPEMDVKEYNRVESLVNKRVRWELGSEDYMKWDS
Ga0115004_105216291	3300009526	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDRTSEMDVKDYNRIEL
Ga0105236_10333243	3300009619	Marine Oceanic	MKIKSTKQFWWRFNYLKRNGAEITVTDRTRPFDLKEWNRIESLVNKRVRW
Ga0115000_101024667	3300009705	Marine	MKIVSTKQFWWRFNHLKRNGGEIIVTDKTPEMDVKDFNRIELLVNKRVRWE
Ga0115000_103666031	3300009705	Marine	MKIVSTKQFWWRLNYLKRNGGEITVTDRTSEMDVKDYNRIELLVNKRVRWEL
Ga0115002_106984631	3300009706	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTSDMDVNEFNRI
Ga0115002_108414354	3300009706	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRASEMDVKAFNRISL
Ga0115002_109208491	3300009706	Marine	MKIKATKQFWWRLNYLKRNGGEITVTDRTPEMDVKEFNRIELLVNKRV
Ga0114999_102949541	3300009786	Marine	MKIVSTKQFWWRLYHLKRNGGEITVTDRTSEMDVKDVNRISLDVNRRVRWELGSEGFGIW
Ga0114999_110255423	3300009786	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVNAFNKISLAVSRRVRWELGSEGF
Ga0098047_103048493	3300010155	Marine	MKIKSTKQFWWRFNYLKRNGAEITVTDRTRPFDLKEW
Ga0151669_1624451	3300011128	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDKTPEMDIKEFNRIELLVNKRV
Ga0163108_106469333	3300012950	Seawater	MKIKSTKQFWWRFNHLKRNGGEITVTDRTRPFDLKEWNRIESLVNKRV
Ga0163179_113027723	3300012953	Seawater	MKIKSTKQFWWRFNYLKRNGAQITVTDRTPEMDVKEHNRIEMLVNKRVRWELGPKRFMEW
Ga0181427_11538001	3300017745	Seawater	MKIKSTKQFWWRFNYLVKHGAQITITDRTSPFDLKEHNRIEMLVNARVRWELGPEGFMN
Ga0181432_12566472	3300017775	Seawater	MKIVSTKQFWWRLNHLKRNGGEITVTDRTPEMDVKDFNRIELLVNK
Ga0181432_12893223	3300017775	Seawater	MKIKSTKQFWWRFNHLKRNGAEITVTDRTRPFDLKEWNRIESLV
Ga0211685_10131073	3300020253	Marine	MKIKSTKQFWWRLNYLKRNGGEIIVTDRTPEMDVKEHNRVESLVNKRVRWELGP
Ga0211679_10652734	3300020263	Marine	MKIKSTKQFWWRLNHLKRNGGEIIVTDRTPEMDVKEFNRIELLVNKRVRWEI
Ga0211629_11042381	3300020273	Marine	LKIVSTKQFWWRFNHLKRNGGEITVTDRTRPFDLKEWNRIESL
Ga0211697_100984971	3300020458	Marine	MKIKSNKQFWWRLNHLKRNGGEITVTDRTPEMDVKEF
Ga0206683_102107661	3300021087	Seawater	MKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIESLVN
(restricted) Ga0233437_11699411	3300024259	Seawater	MKIVSTKQFWWRFNYLKRNGGEITVTDRTPEMDVKEF
(restricted) Ga0233437_13386271	3300024259	Seawater	MKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIESLVNKRVRWELGSEG
Ga0209644_11287022	3300025125	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEF
Ga0209337_12598593	3300025168	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDSTPEMDVKEFNRIELLVNKRVRWEIGSEGM
Ga0208837_10443811	3300025234	Deep Ocean	MKIKSTKQFWWRFNHLKRNGGEITVTDRTSEMDVKDFNRIESLVNKRVRWE
Ga0209556_11239781	3300025547	Marine	MKIVSTKQFWWRFNYLKRNGGEITVTDRTPEMDVKEFNRIELLVNSRVRWELGPENFMK
Ga0209774_10146059	3300025584	Marine	MKIVSTKQFWWRFNYLKRNGGEITVTDRTPEMDVKEFNRIELLVNSRVRWELGPEN
Ga0209361_11490281	3300025602	Marine	MKIVSTKQFWWRFNYLKRNGGVITVTDRTPEMDVKEFNRIELLVNSRVRWELGPE
Ga0209558_12137551	3300025729	Marine	MKIVSTKQFWWRFNYLKRNGGVITVTDRTPEMDVKEFNRIELLVNSRVRWELGPENFMK
Ga0209362_12939352	3300025770	Marine	MKIVSTKQFWWRFNYLKRNGGEITVTDRTPEMDVKEFNRIELLVNSRVRWELGSE
Ga0208747_10964372	3300026074	Marine	MKIKSKKQFWWRLNHLKRNGGEITITDRTPEMDVKDFNRIE
Ga0207963_11278101	3300026080	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDRTSELDVKEFNRIESLVNKRV
Ga0208113_10306321	3300026087	Marine	MKIKSTKQFWWRLNHLKRNGAEITVTDRTSEMDVNAFNKISLAVS
Ga0208113_10799731	3300026087	Marine	MKIKSTKQFWWRINHLKRNGGEITVTDRTSEMDVNAFNKISLAVNRRVRWELGSEGF
Ga0208764_105039691	3300026321	Marine	LKIVSTKQFWWRFNHLKRNGAKITVTDRTPEMDVKEFNRIESLVR
Ga0209384_10301551	3300027522	Marine	MKIKSTKQFWWRLNYLKRNGGEIIVTDRTPEMDVKEH
Ga0209710_11796001	3300027687	Marine	MKIVSTKQFWWRFNYLKRNGGVITVTDRTPDMDVKE
Ga0209816_11708284	3300027704	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDIKEFNRIESLV
Ga0209709_102391461	3300027779	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEF
Ga0209709_104409021	3300027779	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDRTSEMDVKDYNRIELLVNKR
Ga0209502_102679184	3300027780	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDRTSEMDVKDYNRIELLVNKRVRWELGSED
Ga0209711_100780011	3300027788	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIELLVNKRVRWELGLERF
Ga0209711_104238753	3300027788	Marine	MKIVSTKQFWWRFNYLKRNGAEITVTDRTPEMDVKEYNRVESLVNKRVRWELG
Ga0209091_101945231	3300027801	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDRTSEMDVKDYNRIELLVNKRVRWELG
Ga0209090_102514082	3300027813	Marine	MKIKSTKQFWWRFNYLKRNGGEIIVTDRTTEMDVKEFNRIELLVNKRVRWELGSEDY
Ga0209501_105352943	3300027844	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIELLVNKRVRWEIGSEGMS
Ga0257122_10479474	3300028177	Marine	MKIVSTKQFWWRFNYLKRNGGVITVTDRTPEMDVKEFNRIELLVNSRVRWELGPENFMKWDSC
Ga0257127_10545561	3300028189	Marine	MKIVSTKQFWWRFNYLKRNGGEITVTDRTPEMDVKEFNRIELLVNSRVRWE
Ga0257108_10917611	3300028190	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDVKEFNKISL
Ga0257121_10498271	3300028198	Marine	MKIVSTKQFWWRFNYLKRNGGVITVTDRAPEMDVKE
Ga0257119_10678771	3300028274	Marine	MKIVSTKQFWWRFNYLKRNGGEITVTDRTPEMDVKEFNRI
Ga0257113_11111931	3300028488	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTTEMDVNAFNKISLA
Ga0257113_11218383	3300028488	Marine	MKIKSTKQFWWRINHLKRNGGEITVTDRTSEMDVNAFNKISL
Ga0257113_11245082	3300028488	Marine	MRKGLIMKIKSTKQFWWRLNHLKRNGGEITVTDRTSEMDVNAFNRISLAVNRRVR
Ga0257113_12425813	3300028488	Marine	MKIVSTKQFWWRLNHLKRNGGEITVTDRTPEMDVHAFNRISLAVNRRVRW
Ga0257112_102556013	3300028489	Marine	MKIKSKKQFWWRLNHLKRNGGEITITDRTPEMDVKD
Ga0257111_11053374	3300028535	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDVKEFNRIELLVNKRVRWEIGS
Ga0308022_10423245	3300031142	Marine	MKIKSTKQFWWRLNYLKRNGGEIIVTDRTPEMDVKEYNRIELLVNKRVRWELGS
Ga0308025_11502875	3300031143	Marine	MKIVSTKQFWWRLNDLKRKGGEIIVTDRTPEMDVKE
Ga0307488_101309191	3300031519	Sackhole Brine	MKIVSTKQFWWRLNDLKRKGGEIIVTDRTPEMDVKEYNRVES
Ga0308019_100031391	3300031598	Marine	MKIKSTKQFWWRLNYLKRNGGEIIVTDRTPEMDVKEHNRVES
Ga0308019_102489861	3300031598	Marine	MKIVSTKQFWWRFNNLKKNGGEIIVTDRTPEMDLKEHNRLESLVNKRVRWELGPE
Ga0302123_103045531	3300031623	Marine	MKIVSTKQFWWRFNHLKRNGGEIIVTDKTPEMDVKDFNRIELLVNKRVRW
Ga0308001_103505033	3300031644	Marine	MKIKSTKQFWWRLNYLKRNGGEIIVTDRTPEMDVKEY
Ga0307986_103930912	3300031659	Marine	MKIKSTKQFWWRLNYLKRNGGEIIVTDRTPEMDVKEHNRVESLVNKRVRWELG
Ga0308017_10909651	3300031689	Marine	MKIVSTKQFWWRFNDLKRKGGEIIVTDRTPEMDVKEYNR
Ga0308013_1000635216	3300031721	Marine	MKIVSTKQFWWRFNNLKKNGGEIIVTDRTPEMDVKE
Ga0315332_109894051	3300031773	Seawater	MKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIESLVNKRVRWELGSEGY
Ga0310121_104074501	3300031801	Marine	MKIKSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEYN
Ga0310121_104823464	3300031801	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIELLVRKRVRWELGS
Ga0310121_106227521	3300031801	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTSEMDVKEFNRIESLVNKRVRWELGSE
Ga0310123_101326297	3300031802	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDMKE
Ga0310123_101619044	3300031802	Marine	MKIKSTKQFWWRLNHLKRNGGEITVTDRTSEMDVKAFNRISLAVNKRVRWELGSEGFAIW
Ga0310123_106394711	3300031802	Marine	MKIVSTKQFWWRFNHLKRNGGEITVTDRTSEMDVNAFNKISLAVSRRVRWELGSEGFAIW
Ga0310124_103732531	3300031804	Marine	MKIVSTKQFWWRLNYLKRNGGEITVTDRTSEMDVKNFNRIESLV
Ga0315316_103826995	3300032011	Seawater	MKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIESLVNKRVRWELGSEGYSIWSE
Ga0315324_100983391	3300032019	Seawater	MKIKSKKQFWWRLNHLKRNGGEITVTDRTPEMDVKDFNRIELLVNKRVRWEIGSEGMEIW
Ga0315329_104881953	3300032048	Seawater	MKIKSKKQFWWRLNHLKRNGGEITVTDRTPEMDVKEFNRIESLVNKRVH
Ga0315329_105485364	3300032048	Seawater	MKIVSTKQFWWRFNHLKRNGAEIIVTDRTPEMDVKDFNRIELLVNKR
Ga0315329_106652463	3300032048	Seawater	MKIVSTKQFWWRFNHLKRNGGEITVTDRTPEMDVKEFNRIESLVRKRVRWELGSEGM
Ga0310345_103455201	3300032278	Seawater	MKIKSKKQFWWRLNHLKRNGGEITVTDRTPEMDVKDFNRIELLVNKRVRWEI
Ga0310345_105524995	3300032278	Seawater	MKIKSKKQFWWRLNHLKRNGGEITVTDRTPEMDVKEFNRIELL
Ga0310345_116101501	3300032278	Seawater	MKIKSTKQFWWRFNHLKRNGAEITVTDRTRPFDLKEWNRIESLVN
Ga0315334_115876011	3300032360	Seawater	MKIKSTKQFWWRLNHLKRNGGEITVTDRTPEMDVKDFNRIELLV
Ga0310342_1025398061	3300032820	Seawater	MKIKSTKQFWWRFNHLKRNGGEITVTDRTSEMDVKEFNRIESLVNKRVRWELG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters