Basic Information | |
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Family ID | F065667 |
Family Type | Metagenome |
Number of Sequences | 127 |
Average Sequence Length | 52 residues |
Representative Sequence | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTYKAMRERQLLINANK |
Number of Associated Samples | 106 |
Number of Associated Scaffolds | 127 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 3.15 % |
% of genes near scaffold ends (potentially truncated) | 19.69 % |
% of genes from short scaffolds (< 2000 bps) | 83.46 % |
Associated GOLD sequencing projects | 92 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (55.906 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (21.260 % of family members) |
Environment Ontology (ENVO) | Unclassified (57.480 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (66.142 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 81.13% β-sheet: 0.00% Coil/Unstructured: 18.87% | Feature Viewer |
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Pfam ID | Name | % Frequency in 127 Family Scaffolds |
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PF03819 | MazG | 0.79 |
PF14743 | DNA_ligase_OB_2 | 0.79 |
PF00166 | Cpn10 | 0.79 |
PF01068 | DNA_ligase_A_M | 0.79 |
COG ID | Name | Functional Category | % Frequency in 127 Family Scaffolds |
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COG0234 | Co-chaperonin GroES (HSP10) | Posttranslational modification, protein turnover, chaperones [O] | 0.79 |
COG1423 | ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family | Replication, recombination and repair [L] | 0.79 |
COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 0.79 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 55.91 % |
All Organisms | root | All Organisms | 44.09 % |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 21.26% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 12.60% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 7.09% |
Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 6.30% |
Marine Sediment | Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment | 5.51% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 4.72% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 3.15% |
Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 3.15% |
Marine Sediment | Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment | 3.15% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 2.36% |
Microbial Mat | Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat | 2.36% |
Marine Sediment | Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment | 2.36% |
Marine Hydrothermal Vent | Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Hydrothermal Vent | 2.36% |
Deep Subsurface | Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface | 2.36% |
Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 2.36% |
Deep Subsurface | Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface | 1.57% |
Marine | Environmental → Aquatic → Marine → Coastal → Sediment → Marine | 1.57% |
Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 1.57% |
Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 1.57% |
Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 1.57% |
Marine | Environmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine | 1.57% |
Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 0.79% |
Marine | Environmental → Aquatic → Marine → Coastal → Sediment → Marine | 0.79% |
Worm Burrow | Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow | 0.79% |
Estuary Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water | 0.79% |
Estuarine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine | 0.79% |
Marine Water | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water | 0.79% |
Diffuse Hydrothermal Flow Volcanic Vent | Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent | 0.79% |
Diffuse Vent Fluid, Hydrothermal Vents | Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Vent Fluid, Hydrothermal Vents | 0.79% |
Hydrothermal Vent Plume | Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume | 0.79% |
Marine Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment | 0.79% |
Methane Seep | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Methane Seep | 0.79% |
Subsea Pool | Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Subsea Pool | 0.79% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300001460 | Marine viral communities from the Pacific Ocean - LP-28 | Environmental | Open in IMG/M |
3300001472 | Marine viral communities from the Pacific Ocean - LP-32 | Environmental | Open in IMG/M |
3300001683 | Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly | Environmental | Open in IMG/M |
3300001938 | Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005 | Environmental | Open in IMG/M |
3300001947 | Marine microbial communities from the Gulf of Maine, Canada - GS002 | Environmental | Open in IMG/M |
3300002231 | Marine sediment microbial communities from Santorini caldera mats, Greece - red mat | Environmental | Open in IMG/M |
3300002242 | Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat | Environmental | Open in IMG/M |
3300003542 | Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNA | Environmental | Open in IMG/M |
3300003583 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA | Environmental | Open in IMG/M |
3300003592 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA | Environmental | Open in IMG/M |
3300004448 | Marine viral communities from Newfoundland, Canada BC-1 | Environmental | Open in IMG/M |
3300004457 | Marine viral communities from Newfoundland, Canada MC-1 | Environmental | Open in IMG/M |
3300004941 | Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-0.2um | Environmental | Open in IMG/M |
3300005239 | Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine | Environmental | Open in IMG/M |
3300005433 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B | Environmental | Open in IMG/M |
3300005589 | Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2 | Environmental | Open in IMG/M |
3300005601 | Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1 | Environmental | Open in IMG/M |
3300005820 | Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, PM2 | Environmental | Open in IMG/M |
3300005821 | Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, PM1 | Environmental | Open in IMG/M |
3300005823 | Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, MM2 | Environmental | Open in IMG/M |
3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
3300006789 | Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG | Environmental | Open in IMG/M |
3300006793 | Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG | Environmental | Open in IMG/M |
3300006810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 | Environmental | Open in IMG/M |
3300006990 | Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG | Environmental | Open in IMG/M |
3300007345 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 | Environmental | Open in IMG/M |
3300007540 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG | Environmental | Open in IMG/M |
3300007776 | Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS915_Marker113_DNA CLC_assembly | Environmental | Open in IMG/M |
3300007960 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG | Environmental | Open in IMG/M |
3300007992 | Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um | Environmental | Open in IMG/M |
3300008517 | Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 175 cmbsf. Combined Assembly of Gp0128389 and Gp0131431 MM4PM4 | Environmental | Open in IMG/M |
3300009001 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG | Environmental | Open in IMG/M |
3300009136 | Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 82 cmbsf | Environmental | Open in IMG/M |
3300009481 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG | Environmental | Open in IMG/M |
3300009492 | Marine sediment microbial communities from Chincoteague Deepwater methane seep, US Atlantic Margin - Chincoteague Seep MUC-5 6-8 cmbsf | Environmental | Open in IMG/M |
3300009529 | Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG | Environmental | Open in IMG/M |
3300010149 | Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG | Environmental | Open in IMG/M |
3300010330 | Marine hydrothermal vent microbial communities from Guaymas Basin, Gulf of California to study Microbial Dark Matter (Phase II) - Marker 14 Mat core 4569-2 3-6 cm metaG | Environmental | Open in IMG/M |
3300010392 | Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385 | Environmental | Open in IMG/M |
3300010932 | Freshwater microbial communities from the Kallisti Limnes subsea pool, Santorini, Greece - 2-BIOTECH-ROV7-P1 | Environmental | Open in IMG/M |
3300011013 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG | Environmental | Open in IMG/M |
3300011125 | Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_4, permeate | Environmental | Open in IMG/M |
3300011251 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, 0.2 | Environmental | Open in IMG/M |
3300011256 | Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_4, total | Environmental | Open in IMG/M |
3300011258 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate | Environmental | Open in IMG/M |
3300012953 | Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome | Environmental | Open in IMG/M |
3300013099 | Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay6, Core 4569-2, 0-3 cm | Environmental | Open in IMG/M |
3300013101 | Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cm | Environmental | Open in IMG/M |
3300014913 | Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay1, Core 4569-9, 0-3 cm | Environmental | Open in IMG/M |
3300017708 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG | Environmental | Open in IMG/M |
3300017713 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 | Environmental | Open in IMG/M |
3300017714 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15 | Environmental | Open in IMG/M |
3300017719 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 | Environmental | Open in IMG/M |
3300017721 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG | Environmental | Open in IMG/M |
3300017726 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 | Environmental | Open in IMG/M |
3300017727 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20 | Environmental | Open in IMG/M |
3300017735 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21 | Environmental | Open in IMG/M |
3300017742 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21 | Environmental | Open in IMG/M |
3300017746 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29 | Environmental | Open in IMG/M |
3300017749 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 | Environmental | Open in IMG/M |
3300017750 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29 | Environmental | Open in IMG/M |
3300017751 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2) | Environmental | Open in IMG/M |
3300017752 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22 | Environmental | Open in IMG/M |
3300017753 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26 | Environmental | Open in IMG/M |
3300017760 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16 | Environmental | Open in IMG/M |
3300017763 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20 | Environmental | Open in IMG/M |
3300017769 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2) | Environmental | Open in IMG/M |
3300017770 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2) | Environmental | Open in IMG/M |
3300017783 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10 | Environmental | Open in IMG/M |
3300020266 | Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX556082-ERR598951) | Environmental | Open in IMG/M |
3300020438 | Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942) | Environmental | Open in IMG/M |
3300020440 | Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043) | Environmental | Open in IMG/M |
3300021957 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D | Environmental | Open in IMG/M |
3300021959 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D | Environmental | Open in IMG/M |
3300022164 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2) | Environmental | Open in IMG/M |
3300022552 | Guaymas_combined assembly | Environmental | Open in IMG/M |
3300022938 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MG | Environmental | Open in IMG/M |
3300023109 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG | Environmental | Open in IMG/M |
3300023210 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG | Environmental | Open in IMG/M |
3300024188 | Seawater microbial communities from Monterey Bay, California, United States - 2D | Environmental | Open in IMG/M |
3300024228 | Seawater microbial communities from Monterey Bay, California, United States - 41D | Environmental | Open in IMG/M |
3300024266 | Seawater microbial communities from Monterey Bay, California, United States - 75D | Environmental | Open in IMG/M |
3300024291 | Seawater microbial communities from Monterey Bay, California, United States - 74D | Environmental | Open in IMG/M |
3300024346 | Whole water sample coassembly | Environmental | Open in IMG/M |
3300024433 | Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes) | Environmental | Open in IMG/M |
3300024519 (restricted) | Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27 | Environmental | Open in IMG/M |
3300025070 | Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
3300025083 | Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025085 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025108 | Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025137 | Marine viral communities from the Pacific Ocean - LP-32 (SPAdes) | Environmental | Open in IMG/M |
3300025156 | Marine hydrothermal vent microbial communities from Guaymas Basin, Gulf of California to study Microbial Dark Matter (Phase II) - Marker 14 Mat core 4569-2 3-6 cm metaG (SPAdes) | Environmental | Open in IMG/M |
3300025483 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025645 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes) | Environmental | Open in IMG/M |
3300025652 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes) | Environmental | Open in IMG/M |
3300025658 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025668 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025674 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
3300025853 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes) | Environmental | Open in IMG/M |
3300026187 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
3300027742 | Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 3 (SPAdes) | Environmental | Open in IMG/M |
3300027858 | Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 (SPAdes) | Environmental | Open in IMG/M |
3300029448 | Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082 | Environmental | Open in IMG/M |
3300032136 | Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrow | Environmental | Open in IMG/M |
3300032277 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite | Environmental | Open in IMG/M |
3300032373 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI24003J15210_100464692 | 3300001460 | Marine | MKRINYYDHLHKLANEAYNTSYIAGLTSEQRYELISDTHRAMRERQLXINANK* |
JGI24004J15324_100599084 | 3300001472 | Marine | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTHRAMRERQLLINANK* |
GBIDBA_100610983 | 3300001683 | Hydrothermal Vent Plume | MKRINYYEHLHELAMKRYNTSYIAGLTSEQRSELISDTYKAMRERQLLINLNKKK* |
GOS2221_10121195 | 3300001938 | Marine | MKRINYYDHLHKLAKERYNTSYIAGLTDEQRGELISDTYKAMRERQVLINLNKCI* |
GOS2218_10173906 | 3300001947 | Marine | MKRINYNDHLHKLALERYNTRYIAGLTDKQRSELIGDTFKAMRDRQLLINAKK* |
KVRMV2_1000084833 | 3300002231 | Marine Sediment | MKRINYHEHLHKLANXRYNTSYIAGLTSEQRYEIISDTYKSYARKTVVN* |
KVRMV2_1003139652 | 3300002231 | Marine Sediment | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRSEIIGDTYKAMRERQLLINANK* |
KVRMV2_10088049110 | 3300002231 | Marine Sediment | MKRINYHEHLHKLANERYNTSYIAGLTSEQRYEIISDTYKAMRERQLLINLNKKK* |
KVWGV2_109918563 | 3300002242 | Marine Sediment | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYEIISDTYKAMRERQLLINLNKKK* |
FS900DNA_102807844 | 3300003542 | Diffuse Hydrothermal Flow Volcanic Vent | MKRINYYDYLHKLANERYNTSYIAGLTSEQRYELISDTHRAMRERQLLINANK* |
JGI26253J51717_10141426 | 3300003583 | Marine | MKRINYNDHLHKLAKERYNTSYIAGLKSEQQSELISDTYKAMREKIITN* |
JGI26246J51724_10336773 | 3300003592 | Marine | MKRINYNDHLHKLSLERYNTRYIAGLTDKQRSELISDTFKAMRERQLLINANK* |
Ga0065861_10002273 | 3300004448 | Marine | MKRINYNDHLHKLALERYNTRYIAGLTNKQRSELIGDTFKAMRERQLLINAKK* |
Ga0066224_10336722 | 3300004457 | Marine | MKRINYNDHLHKLALERYNTRYIAGLTDKQRSELISDTFKAMRERQLLINAKK* |
Ga0068514_10383151 | 3300004941 | Marine Water | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTHRAMRERQLLINLNK* |
Ga0073579_10145922 | 3300005239 | Marine | MKRINYYDHLHKLANERYNTSYIAGLTSEQLSELISDTFKAMRERQLLINANK* |
Ga0073579_10871122 | 3300005239 | Marine | MKRINYYDHLHKLANERYNTSYIAGLTSEQLSELISDTHKAMRERQLLINANK* |
Ga0073579_16872803 | 3300005239 | Marine | MKRINYYDHLHKLANDRYNTSYIAGLTSEQFCELIGDTFKAMRERQLLINANK* |
Ga0066830_100184534 | 3300005433 | Marine | MKRINYYDHLHKLAKERYNTSYIAGLTSEQRSELISDTYKAMRERQVLINLNK* |
Ga0070729_101035106 | 3300005589 | Marine Sediment | MKRINYYDHLHKLANDRYNTSYIAGLTSEQLSELISDTHKAMRERQLLINANK* |
Ga0070722_102476822 | 3300005601 | Marine Sediment | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTHKAMRERQLLINANK* |
Ga0078747_1595454 | 3300005820 | Marine Sediment | MKRINYYDHLHKLANKRYNTSYIAGLTSEQRYELISDTHK |
Ga0078747_1674122 | 3300005820 | Marine Sediment | MKRINYYDHLHKLALERYNTRYIAGLTDKQRSELIGDTYEAMRERQLLINAKK* |
Ga0078746_10133958 | 3300005821 | Marine Sediment | MKRINYYDHLHKLANKRYNTSYIAGLTSEQRYELISDTHKAMRERQLLINLNKKK* |
Ga0078745_10498584 | 3300005823 | Marine Sediment | MKRINYYDHLHKLANERYNTSYIAGLTSEQLSELISDTHKAMRDRQLLINLNKKK* |
Ga0098048_10342232 | 3300006752 | Marine | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRYELISDTHKAMRERQLLINLNKKK* |
Ga0098054_13450532 | 3300006789 | Marine | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRYELISDTYKAMRERQLLINANK* |
Ga0098055_10260188 | 3300006793 | Marine | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRYELISDTYKAMRERQLLINLNKKK* |
Ga0070754_100877323 | 3300006810 | Aqueous | MKRINYYDHLHKLAKERYNTSYIAGLTDEQRGELISDTYKAMRERQVLINLKK* |
Ga0098046_10143978 | 3300006990 | Marine | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRYELISDTHKAMRERQLLINANK* |
Ga0070752_13929563 | 3300007345 | Aqueous | MKRINYYDHLHKLANDRYNTSYIAGLTSEQRYELISDTHKAMRERQLLINANK* |
Ga0099847_12194851 | 3300007540 | Aqueous | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTHKAMRDRQLLINLNKKK* |
Ga0105674_12266403 | 3300007776 | Diffuse Vent Fluid, Hydrothermal Vents | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTHRAMRDRQLLINANK* |
Ga0099850_11861143 | 3300007960 | Aqueous | MKRINYYDHLHKLANDRYNTSYIAGLTSEKRYELISDTHKAMRERQLLINANK* |
Ga0105748_102049224 | 3300007992 | Estuary Water | MKRINYYDHLHKLANERYNTSYIAGLTSEQRSELISDTFKAMRER |
Ga0111034_10050482 | 3300008517 | Marine Sediment | MKRINYYDHLHKLANKRYNTSYIAGLTSEQRYELISDTHKAMRDRQLLINLSKKK* |
Ga0102963_10578535 | 3300009001 | Pond Water | MKRINYYDHLHKLAKERYNTSYIAGLTSEQRSELIGDTYEAMRERQLLINLNKKK* |
Ga0102963_11633381 | 3300009001 | Pond Water | MKRINYYDHLHKLANERYNTSYIAGLTSEQRSELISDTFKAMRERQLLINLNKNK* |
Ga0118735_102459471 | 3300009136 | Marine Sediment | MKRINYNDHLHKLALERYNTRYIAGLTDKQRSELIGDTFKAMRERQLLINANK* |
Ga0114932_100621686 | 3300009481 | Deep Subsurface | MKRINYYDHLHKLSRERYNTSYIAGLTSEQRSEIIGDTYKAMRERQLLINANK* |
Ga0127412_100039956 | 3300009492 | Methane Seep | RINYNDHLHKLALERYNTRYIAGLTSEQRYELISDTHKAMRERQLLINANK* |
Ga0114919_104838972 | 3300009529 | Deep Subsurface | MKRINYYDHLHKLSRERYNTSYIAGLTSEQRSEIIADTYKAMRERQLLINLNKKK* |
Ga0098049_10674853 | 3300010149 | Marine | MKRINYYDHLHKLSNERYNTSYIAGLTSEERYELISDTHKAMRERQLLINLNKKK* |
Ga0136651_101377111 | 3300010330 | Marine Hydrothermal Vent | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTYEAMRERQLLINLNK* |
Ga0118731_1077857113 | 3300010392 | Marine | MKRINYYDHLHKLALERYNTRYIAGLTDKQRSELISDTFKAMRDRQLLINAKK* |
Ga0137843_10642754 | 3300010932 | Subsea Pool | MKRINXYDHLXKLXNERYNTSYIAGLTSEQRSEIIGDTYKAMRERQLLINANK* |
Ga0114934_104603431 | 3300011013 | Deep Subsurface | MKRINYYDHLHKLSRERYNTSYIAGITSEQRSEIIGDTYKAMRERQLLINANK* |
Ga0114934_105044412 | 3300011013 | Deep Subsurface | MKRINYYDHLHKLANERYNTSYIAGLTSEQRSEIIGDTYKAMRERQLLINANK* |
Ga0151663_10245951 | 3300011125 | Marine | MKRINYYDHLHKLAKERYNTSYIAGLTSEQRSELIGDTYKAMRER |
Ga0151676_10004677 | 3300011251 | Marine | MKRINYYDHLHKLALERYNTRYIAGLTDKQRSELIGDTYEAMRERQLLINLNKKK* |
Ga0151664_10119161 | 3300011256 | Marine | MKRINHYDHLNKLANERYNTSYIAGLTSEQRNELISDTHKAMRERQLLINANK* |
Ga0151677_10069781 | 3300011258 | Marine | MKRINYYDHLHKLAKERYNTSYIAGLTSEQRSELISDTYKAMRERQLLINLNKKK* |
Ga0163179_107093902 | 3300012953 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELIGDTYKAMRERQLLINLNKKK* |
Ga0164315_1004840910 | 3300013099 | Marine Sediment | MKRINYYDHLNKLANERYNTSYIAGLTSEQRYELISDTYEAMRERQLLINLNK* |
Ga0164313_117396031 | 3300013101 | Marine Sediment | NYYEHLHELAMKRYNTSYIAGLTSEQRSELISDTYKAMRERQLLINLNKKK* |
Ga0164310_1006657710 | 3300014913 | Marine Sediment | MKRINYHEHLHKLANERYNTSYIAGLTSEQRYELISDTYEAMRERQLLINLNK* |
Ga0181369_10495781 | 3300017708 | Marine | MKRINYYDHLHKLSNERYNTSYITGLTSEQRYELISDTYKAMRERQLLINLNKKK |
Ga0181369_10735311 | 3300017708 | Marine | MERINYYDHLHKLANKRYNTSYIAGLTSEQRYELISDTHKAMRERQLLINLNK |
Ga0181391_10551805 | 3300017713 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTYRAMRERQLLINANK |
Ga0181391_10794381 | 3300017713 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTYKAMRERQLLINANK |
Ga0181412_10065514 | 3300017714 | Seawater | MKRINYYDHLHKLAKERYNTSYIAGLTDEQRGELISDTHKAMRERQVLINLKK |
Ga0181390_11087181 | 3300017719 | Seawater | HLHKLANERYNTSYIAGLTSEQRSELISDTYRAMRERQLLINLNKNK |
Ga0181390_11492411 | 3300017719 | Seawater | HLHKLANERYNTSYIAGLTSEQRSELISDTYRAMRERQLLINANK |
Ga0181373_10577973 | 3300017721 | Marine | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRYELISDTYKAMRERQLLINLNK |
Ga0181381_10058222 | 3300017726 | Seawater | MKRINYYDHLHKLANERHNTSYIAGLTSEQRYTLISDTHKAMRERQLLINANK |
Ga0181401_10903791 | 3300017727 | Seawater | TTNMKRINYYDHLHKLANERYNTSYIAGLTSEQRSELISDTFKAMRERQLLINLNKNK |
Ga0181401_11516231 | 3300017727 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRSELISD |
Ga0181401_11584091 | 3300017727 | Seawater | RINYYDHLHKLAKERYNTSYIAGLTSEQRSELISDTFKAMRERQLLINLNK |
Ga0181431_10346296 | 3300017735 | Seawater | MKRINYYDHLHKLAKERYNTSYIAGLTDEQRGELISDTHRAMRERQVLINLKK |
Ga0181431_10708151 | 3300017735 | Seawater | MKRINYYDHLHKLAKERYNTSYIAGLTSEQRSELISDTYKA |
Ga0181431_11257861 | 3300017735 | Seawater | MKRINYYDHLHKLAKERYNTGYIAGLTSEQRSELISDTYKAMRERQVLINLNK |
Ga0181399_11440093 | 3300017742 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRSELISDTYRAMRERQLLINLNK |
Ga0181399_11738561 | 3300017742 | Seawater | GRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTYRAMRERQLLINANK |
Ga0181389_11864831 | 3300017746 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRSELISDTFKAMRERQLLINLNKN |
Ga0181389_11974511 | 3300017746 | Seawater | TTNMKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTYRAMRERQLLINANK |
Ga0181392_12349492 | 3300017749 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRSELISDTYRAMRERQLLINANK |
Ga0181405_10087171 | 3300017750 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISD |
Ga0187219_12184573 | 3300017751 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYKLISDTYKAMRERQLLINANK |
Ga0181400_11641473 | 3300017752 | Seawater | MKRINYHDHLHKLAKERYNTSYIAGLTSEQRSELISDTYKAMRERQVLINLNK |
Ga0181407_10557673 | 3300017753 | Seawater | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRSELISDTYKAMRERQLLINANK |
Ga0181408_10740154 | 3300017760 | Seawater | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRSELISDTYKAMRERQLLINLNK |
Ga0181410_11192253 | 3300017763 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRSELISDTFKAMRERQLLINLNK |
Ga0187221_10281041 | 3300017769 | Seawater | TTNMKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTHKAMRERQLLINANK |
Ga0187217_12556551 | 3300017770 | Seawater | TTNMKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTYKAMRERQLLINANK |
Ga0181379_10602842 | 3300017783 | Seawater | MKRINYYDHLHKLAKERYNTSYIAGLTSDQRSELISETYKAMRERQVLINSNK |
Ga0211519_10872681 | 3300020266 | Marine | MKRINYHEHLHKLANERYNTSYIAGLTSEQRYEIISDTYKAMRERQLLINLN |
Ga0211576_101469113 | 3300020438 | Marine | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTHRAMRERQLLINANK |
Ga0211518_100113281 | 3300020440 | Marine | MKRINYHEHLHKLANERYNTSYIAGLTSEQRYEIISDTYKAMRERQLLINLNKKK |
Ga0222717_100223388 | 3300021957 | Estuarine Water | MKRINYYDHLHKLANERYNTSYIAGLTSEQRSELISDTFKAMRERQLLINLNKNK |
Ga0222716_101169097 | 3300021959 | Estuarine Water | MKRINYYDHLHKLANERYNTNYIAGLTSEQRSELISDTFKAMRERQLLINLNKNK |
Ga0212022_10745001 | 3300022164 | Aqueous | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELMSDTHKAMRERQLS |
Ga0212118_101938812 | 3300022552 | Marine Hydrothermal Vent | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTYEAMRERQLLINLNK |
(restricted) Ga0233409_101362344 | 3300022938 | Seawater | MKRINYNDHLHKLALERYNTRYIAGLTDKQRSELISDTFKAMRERQLLINANK |
(restricted) Ga0233432_102311722 | 3300023109 | Seawater | MKRINYHDHLHKLAKERYNTSYIAGLKSEQQSELISDTYKAMREKIITN |
(restricted) Ga0233432_103761851 | 3300023109 | Seawater | MKRINYHDHLHKLAKERYNTSYIAGLTSEQQSELISDTYKAMRERVITN |
(restricted) Ga0233412_100424438 | 3300023210 | Seawater | MKRINYHDHLHKLAKERYNTSYIAGLKSEQQSELISDTYKAMRERVITN |
Ga0228602_10834281 | 3300024188 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQLSELISHTFKAMRERQLLINLNKNK |
Ga0228633_10246982 | 3300024228 | Seawater | MKRINYYDHLHKLAKERYNTSYIAGLTSEQRSELIGDTFKAMRERQLLINLNKNK |
Ga0228661_10333031 | 3300024266 | Seawater | MKRINYYDHLHKLANERYNTSYIAGLTSEQRSELIGDTFKAMRERQLLINLNKNK |
Ga0228660_10381405 | 3300024291 | Seawater | MKRINYYDHLHKLAKERYNTSYIAGLTSEQRSELIGDTFK |
Ga0244775_101801416 | 3300024346 | Estuarine | MKRINYHDHLHKLAKERYNTSYIAGLKSEQQSELISDTYKAMRERAITN |
Ga0209986_102563873 | 3300024433 | Deep Subsurface | MKRINYYDHLHKLSRERYNTSYIAGLTSEQRSEIIADTYKAMRERQLLINLNKKK |
(restricted) Ga0255046_101630625 | 3300024519 | Seawater | MKRINYNDHLHKLAKERYNTSYIAGLTSEQLSELISDTHRAMRERQLLINANK |
Ga0208667_10068357 | 3300025070 | Marine | MKRINYYDHLHKLAKERYNTSYIAGLTSEQRSELISDTYKAMRERQVLINLNK |
Ga0208791_10311125 | 3300025083 | Marine | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRYELISDTHKAMRERQLLINLNKKK |
Ga0208792_10798911 | 3300025085 | Marine | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRYELISDTHKAMRERQLLINLNKK |
Ga0208793_11154682 | 3300025108 | Marine | MKRINYYDHLHKLSNERYNTSYIAGLTSEQRYELISDTYKAMRERQLLINLNKKK |
Ga0209336_100036167 | 3300025137 | Marine | MKRINYYDHLHKLASERYNTSYIAGLTSEQRYELISDTHKAMRERQLLINANK |
Ga0209834_101592034 | 3300025156 | Marine Hydrothermal Vent | NYYEHLHELAMKRYNTSYIAGLTSEQRSELISDTYKAMRERQLLINLNKKK |
Ga0209557_10714772 | 3300025483 | Marine | MKRINYNDHLHKLAKERYNTSYIAGLKSEQQSELISDTYKAMRERQVLINLNK |
Ga0208643_10432614 | 3300025645 | Aqueous | MKRINYYDHLHKLANERYNTSYIAGLTSEQLSELISDTFKAMRERQLLINANK |
Ga0208134_11684542 | 3300025652 | Aqueous | MKRINYYDHLHKLANERYNTSYIAGLTSEQLSELISDTHKAMRERQLLINANK |
Ga0209659_10461925 | 3300025658 | Marine | MKRINYNDHLHKLSLERYNTRYIAGLTDKQRSELISDTFKAMRERQLLINANK |
Ga0209659_11350691 | 3300025658 | Marine | MKRINYNDHLHKLAKERYNTSYIAGLKSEQQSELISDTYKAMRERVITN |
Ga0209251_100246630 | 3300025668 | Marine | MKRINYNDHLHKLAKERYNTSYIAGLKSEQQSELISDTYKAMREKIITN |
Ga0208162_11111871 | 3300025674 | Aqueous | MKRINYYDHLHKLALERYNTRYIAGLTDKQRSELIGDTYEAMRERQLLINLNKTQINEEY |
Ga0208645_12380452 | 3300025853 | Aqueous | MKRINYYDHLHKLAKERYNTSYIAGLTDEQRGELISDTYKAMRERQVLINLKK |
Ga0209929_10531782 | 3300026187 | Pond Water | MKRINYYDHLHKLAKERYNTSYIAGLTSEQRSELIGDTYEAMRERQLLINLNKKK |
Ga0209121_1002929111 | 3300027742 | Marine | MKRINYYDHLHKLANERYNTSYIAGLTSEQRYELISDTHKAMRERQLLINANK |
Ga0209013_100395724 | 3300027858 | Marine | MKRINYYDHLHKLANERYNTSYIAGLTSEQRGELISDTFKAMRERQLLINLNKNK |
Ga0183755_10253324 | 3300029448 | Marine | MKRINYYEHLHKLAKERYNTSYIAGLTDEQRGELIVDTHRAMRERQVLINLNK |
Ga0183755_10406553 | 3300029448 | Marine | MKRINYYDHLHKLANERYNTSYIAGLTSEQLSELISDTHKAMRDRQLLINSNK |
Ga0183755_10941513 | 3300029448 | Marine | MKRINYYDHLHKLAKERYNTSYIAGLTSEQRSEIIGDTYKAMRERQLLINLNKKK |
Ga0316201_108832102 | 3300032136 | Worm Burrow | MKRINYNDHLHKLALERYNTRYIAGLTSEQRYELISDTHKAMRERQLLINANK |
Ga0316202_101594151 | 3300032277 | Microbial Mat | MKRINYYDHLHKLANDRYNTSYIAGLTSEQLSELISDTHKAMRERQLLINANK |
Ga0316202_106049171 | 3300032277 | Microbial Mat | KRINYNDHLHKLALERYNTRYIAGLTDKQRSELIGDTYEAMRERQLLINLNKKK |
Ga0316204_103281903 | 3300032373 | Microbial Mat | MKRINYYDHLHKLANERYNTSYIAGLTSEQRQEIISDTFKAMRERQLLINANK |
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