NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065516

Metagenome / Metatranscriptome Family F065516

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065516
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 52 residues
Representative Sequence MDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAITTFIDRSP
Number of Associated Samples 96
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 90.40 %
% of genes near scaffold ends (potentially truncated) 18.11 %
% of genes from short scaffolds (< 2000 bps) 70.87 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (81.890 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment
(14.173 % of family members)
Environment Ontology (ENVO) Unclassified
(32.283 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(43.307 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 55.56%    β-sheet: 0.00%    Coil/Unstructured: 44.44%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF00486Trans_reg_C 33.86
PF00873ACR_tran 5.51
PF01370Epimerase 3.15
PF00072Response_reg 2.36
PF01041DegT_DnrJ_EryC1 2.36
PF12146Hydrolase_4 1.57
PF03352Adenine_glyco 1.57
PF00689Cation_ATPase_C 1.57
PF07748Glyco_hydro_38C 0.79
PF01230HIT 0.79
PF03992ABM 0.79
PF04794YdjC 0.79
PF13673Acetyltransf_10 0.79
PF07676PD40 0.79
PF12697Abhydrolase_6 0.79
PF07690MFS_1 0.79
PF04545Sigma70_r4 0.79
PF13185GAF_2 0.79
PF13335Mg_chelatase_C 0.79
PF02527GidB 0.79
PF04655APH_6_hur 0.79
PF00561Abhydrolase_1 0.79
PF16363GDP_Man_Dehyd 0.79
PF01738DLH 0.79
PF00155Aminotran_1_2 0.79
PF01569PAP2 0.79
PF00583Acetyltransf_1 0.79
PF01055Glyco_hydro_31 0.79
PF08544GHMP_kinases_C 0.79
PF01321Creatinase_N 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 2.36
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 2.36
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 2.36
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 2.36
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 2.36
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 2.36
COG0474Magnesium-transporting ATPase (P-type)Inorganic ion transport and metabolism [P] 1.57
COG28183-methyladenine DNA glycosylase TagReplication, recombination and repair [L] 1.57
COG0006Xaa-Pro aminopeptidaseAmino acid transport and metabolism [E] 0.79
COG035716S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B)Translation, ribosomal structure and biogenesis [J] 0.79
COG0383Alpha-mannosidaseCarbohydrate transport and metabolism [G] 0.79
COG1501Alpha-glucosidase/xylosidase, GH31 familyCarbohydrate transport and metabolism [G] 0.79
COG3394Chitooligosaccharide deacetylase ChbG, YdjC/CelG familyCarbohydrate transport and metabolism [G] 0.79
COG3570Streptomycin 6-kinaseDefense mechanisms [V] 0.79

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.04 %
UnclassifiedrootN/A14.96 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886013|SwBSRL2_contig_346381Not Available854Open in IMG/M
3300000228|TB_PC08_66DRAFT_10197923Not Available505Open in IMG/M
3300002120|C687J26616_10074095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1130Open in IMG/M
3300003319|soilL2_10181606All Organisms → cellular organisms → Bacteria2382Open in IMG/M
3300003319|soilL2_10274092All Organisms → cellular organisms → Bacteria1338Open in IMG/M
3300003461|P42013CM_1069166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi712Open in IMG/M
3300003994|Ga0055435_10097955Not Available772Open in IMG/M
3300004778|Ga0062383_10069308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1440Open in IMG/M
3300004779|Ga0062380_10161052All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi884Open in IMG/M
3300005289|Ga0065704_10418205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium734Open in IMG/M
3300005294|Ga0065705_10343625Not Available968Open in IMG/M
3300005294|Ga0065705_10857423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium590Open in IMG/M
3300005295|Ga0065707_11056077All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi525Open in IMG/M
3300005440|Ga0070705_100104545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1796Open in IMG/M
3300005577|Ga0068857_100689008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi970Open in IMG/M
3300005829|Ga0074479_10743711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales5602Open in IMG/M
3300005829|Ga0074479_10949375All Organisms → cellular organisms → Bacteria4232Open in IMG/M
3300005833|Ga0074472_10535973All Organisms → cellular organisms → Bacteria3404Open in IMG/M
3300005844|Ga0068862_101128845All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300006844|Ga0075428_100485513All Organisms → cellular organisms → Bacteria1322Open in IMG/M
3300006844|Ga0075428_102496952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium529Open in IMG/M
3300006846|Ga0075430_100049702All Organisms → cellular organisms → Bacteria3539Open in IMG/M
3300006847|Ga0075431_101551869Not Available620Open in IMG/M
3300006865|Ga0073934_10015272All Organisms → cellular organisms → Bacteria8607Open in IMG/M
3300006865|Ga0073934_10036534All Organisms → cellular organisms → Bacteria4563Open in IMG/M
3300006880|Ga0075429_100823674Not Available813Open in IMG/M
3300009053|Ga0105095_10267614Not Available938Open in IMG/M
3300009081|Ga0105098_10000068All Organisms → cellular organisms → Bacteria29209Open in IMG/M
3300009081|Ga0105098_10056386All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cardiobacteriales → Cardiobacteriaceae → Cardiobacterium1613Open in IMG/M
3300009091|Ga0102851_12947851All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300009100|Ga0075418_10324857All Organisms → cellular organisms → Bacteria1642Open in IMG/M
3300009146|Ga0105091_10085791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1430Open in IMG/M
3300009147|Ga0114129_11232031Not Available930Open in IMG/M
3300009157|Ga0105092_10014595All Organisms → cellular organisms → Bacteria4124Open in IMG/M
3300009166|Ga0105100_10798379Not Available585Open in IMG/M
3300009168|Ga0105104_10005044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia9052Open in IMG/M
3300009168|Ga0105104_10046983All Organisms → cellular organisms → Bacteria → Terrabacteria group2360Open in IMG/M
3300009168|Ga0105104_10401277All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300009817|Ga0105062_1129268Not Available517Open in IMG/M
3300009821|Ga0105064_1130531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium531Open in IMG/M
3300009823|Ga0105078_1011134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium966Open in IMG/M
3300009837|Ga0105058_1166794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium540Open in IMG/M
3300009873|Ga0131077_11535569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi546Open in IMG/M
3300010040|Ga0126308_11146233Not Available549Open in IMG/M
3300010399|Ga0134127_10078841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2820Open in IMG/M
3300011431|Ga0137438_1097852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi891Open in IMG/M
3300011441|Ga0137452_1015863All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon2305Open in IMG/M
3300011442|Ga0137437_1161487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi776Open in IMG/M
3300011442|Ga0137437_1249860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium613Open in IMG/M
3300011444|Ga0137463_1007348All Organisms → cellular organisms → Bacteria3709Open in IMG/M
3300012204|Ga0137374_10015716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi8711Open in IMG/M
3300012204|Ga0137374_10154114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2046Open in IMG/M
3300012228|Ga0137459_1167879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi647Open in IMG/M
3300012353|Ga0137367_10112928All Organisms → cellular organisms → Bacteria1998Open in IMG/M
3300012675|Ga0137337_1059206Not Available601Open in IMG/M
3300014882|Ga0180069_1006935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2274Open in IMG/M
3300014882|Ga0180069_1027320All Organisms → cellular organisms → Bacteria1226Open in IMG/M
3300015259|Ga0180085_1196314All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300017997|Ga0184610_1164452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium733Open in IMG/M
3300018028|Ga0184608_10113571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1142Open in IMG/M
3300018052|Ga0184638_1028780All Organisms → cellular organisms → Bacteria1995Open in IMG/M
3300018053|Ga0184626_10022271All Organisms → cellular organisms → Bacteria2579Open in IMG/M
3300018053|Ga0184626_10204813All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300018053|Ga0184626_10281024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium693Open in IMG/M
3300018054|Ga0184621_10032783All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1669Open in IMG/M
3300018056|Ga0184623_10093093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1391Open in IMG/M
3300018059|Ga0184615_10001580All Organisms → cellular organisms → Bacteria12276Open in IMG/M
3300018059|Ga0184615_10311388All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300018061|Ga0184619_10377661All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium645Open in IMG/M
3300018075|Ga0184632_10027825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2407Open in IMG/M
3300018078|Ga0184612_10085135Not Available1652Open in IMG/M
3300018081|Ga0184625_10336732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium785Open in IMG/M
3300018084|Ga0184629_10034857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2206Open in IMG/M
3300018084|Ga0184629_10139335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1222Open in IMG/M
3300018084|Ga0184629_10681006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium519Open in IMG/M
3300020003|Ga0193739_1010727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2407Open in IMG/M
3300020003|Ga0193739_1043019All Organisms → cellular organisms → Bacteria1167Open in IMG/M
3300020003|Ga0193739_1094324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium757Open in IMG/M
3300020068|Ga0184649_1112940All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geotalea → Geotalea uraniireducens2638Open in IMG/M
3300021073|Ga0210378_10067296All Organisms → cellular organisms → Bacteria1406Open in IMG/M
3300021090|Ga0210377_10083454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2155Open in IMG/M
3300021090|Ga0210377_10146007All Organisms → cellular organisms → Bacteria1546Open in IMG/M
3300021090|Ga0210377_10441561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi763Open in IMG/M
3300021090|Ga0210377_10675019All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300025119|Ga0209126_1028210All Organisms → cellular organisms → Bacteria1716Open in IMG/M
3300025165|Ga0209108_10381174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi694Open in IMG/M
3300025167|Ga0209642_10031166Not Available3114Open in IMG/M
3300025310|Ga0209172_10024772All Organisms → cellular organisms → Bacteria4170Open in IMG/M
3300025310|Ga0209172_10148161All Organisms → cellular organisms → Bacteria → Terrabacteria group1288Open in IMG/M
3300025313|Ga0209431_10019379All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon5230Open in IMG/M
3300025313|Ga0209431_10055217All Organisms → cellular organisms → Bacteria3085Open in IMG/M
3300025314|Ga0209323_10089729All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon2086Open in IMG/M
3300025318|Ga0209519_10497619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium684Open in IMG/M
3300025319|Ga0209520_10713377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium563Open in IMG/M
3300025324|Ga0209640_10148529All Organisms → cellular organisms → Bacteria2007Open in IMG/M
3300026116|Ga0207674_10412020All Organisms → cellular organisms → Bacteria1306Open in IMG/M
3300027163|Ga0209878_1018438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium944Open in IMG/M
3300027379|Ga0209842_1066233All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium639Open in IMG/M
3300027675|Ga0209077_1004269All Organisms → cellular organisms → Bacteria3778Open in IMG/M
3300027675|Ga0209077_1087703All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300027722|Ga0209819_10004230All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon4556Open in IMG/M
3300027722|Ga0209819_10060362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1307Open in IMG/M
3300027722|Ga0209819_10181510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi735Open in IMG/M
3300027731|Ga0209592_1196605Not Available711Open in IMG/M
3300027743|Ga0209593_10013479All Organisms → cellular organisms → Bacteria3360Open in IMG/M
3300027743|Ga0209593_10049027All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300027743|Ga0209593_10097688All Organisms → cellular organisms → Bacteria → Terrabacteria group1083Open in IMG/M
3300027778|Ga0209464_10160274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi793Open in IMG/M
(restricted) 3300027799|Ga0233416_10072964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1166Open in IMG/M
3300027843|Ga0209798_10108596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1409Open in IMG/M
3300027887|Ga0208980_10785935All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300027909|Ga0209382_10994590Not Available875Open in IMG/M
(restricted) 3300027995|Ga0233418_10107157All Organisms → cellular organisms → Bacteria850Open in IMG/M
(restricted) 3300027995|Ga0233418_10196930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium663Open in IMG/M
3300031099|Ga0308181_1039617Not Available855Open in IMG/M
3300031576|Ga0247727_10035318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae6686Open in IMG/M
3300031576|Ga0247727_10403151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1103Open in IMG/M
3300031873|Ga0315297_10166614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1800Open in IMG/M
3300031873|Ga0315297_10452019All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300031949|Ga0214473_10763388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1047Open in IMG/M
3300032053|Ga0315284_10059462All Organisms → cellular organisms → Bacteria5227Open in IMG/M
3300032156|Ga0315295_11237571All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300032401|Ga0315275_11214925All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300033417|Ga0214471_10162622All Organisms → cellular organisms → Bacteria1839Open in IMG/M
3300033487|Ga0316630_11169202All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi681Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment14.17%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment13.39%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil9.45%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment6.30%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.30%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment4.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil4.72%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand4.72%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment3.15%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment3.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.15%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere3.15%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)2.36%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.36%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.57%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm1.57%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.57%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.79%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater0.79%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.79%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.79%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.79%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.79%
Ore Pile And Mine Drainage Contaminated SoilEnvironmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater0.79%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300000228Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- PC08_66EnvironmentalOpen in IMG/M
3300002120Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003461Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P4 sampleEnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300004779Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3FreshEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300009873Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plantEngineeredOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300011441Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012163Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2EnvironmentalOpen in IMG/M
3300012168Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT860_2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012228Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2EnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012675Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT333_2EnvironmentalOpen in IMG/M
3300014882Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10DEnvironmentalOpen in IMG/M
3300015259Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10DEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020068Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300025119Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025167Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025314Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2EnvironmentalOpen in IMG/M
3300025318Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1EnvironmentalOpen in IMG/M
3300025319Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027163Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027379Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027675Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027731Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027743Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027799 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MGEnvironmentalOpen in IMG/M
3300027843Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027995 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MGEnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031576Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SwBSRL2_0023.000000502162886013Switchgrass RhizosphereMDMSAIADWCTILFLLWYGLKTFVPALGKGYGAIIGGIIALAAALATFIDRSP
TB_PC08_66DRAFT_1019792323300000228GroundwaterMDYSVIADWFTILFFFWFGLKKFVPALDKGAYPTIGAIIALGAAIFTAMSA*
C687J26616_1007409523300002120SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVSTFIDRSP*
soilL2_1018160623300003319Sugarcane Root And Bulk SoilMSSSGIVDWLTILFFAWFGLKVFVPALNKGFFTILGGIIALAAAIAIILDTSP*
soilL2_1027409213300003319Sugarcane Root And Bulk SoilMDYSIIADWFTILFLLWFGLKQFIPALDKGFFPYVGGAIALAAALFTALST*
P42013CM_106916613300003461Ore Pile And Mine Drainage Contaminated SoilMDMSAIADWFTILFFLWFGLKNFIPALDKGFFATIGAIIALFAAVFIFLSP*
Ga0055435_1009795513300003994Natural And Restored WetlandsMDLSIVADWFVVLFFLWYGLKQFIPALNKGIFQYVGGIIIALA
Ga0062383_1006930823300004778Wetland SedimentMGMPAIADWYTILFFLSFGLKTFIPALDKGFFSTLAAIIALPATVTTFIDRNP*
Ga0062380_1016105223300004779Wetland SedimentMDLSVVADWFTILFLLWYGLKQFIPALGKGFFPYVGGVLALAAALFTALST*
Ga0065704_1041820523300005289Switchgrass RhizosphereMDMSTIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAITTIIDTSP*
Ga0065705_1034362523300005294Switchgrass RhizosphereMDMSAIADWCTILFLLWYGLKTFVPALGKGYGAIIGGIIALAAALATFIDRSP*
Ga0065705_1085742313300005294Switchgrass RhizosphereMDMSTIADWCTILFFLWFGLKTFIPALDKGFFSTLGGLIALAAAITTIIDTSP*
Ga0065707_1105607723300005295Switchgrass RhizosphereMSMSTIADWFTILFFLWFGLKTFIPALDKGLSSSLGGILALAA
Ga0070705_10010454523300005440Corn, Switchgrass And Miscanthus RhizosphereMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTFIDTSP*
Ga0068857_10068900823300005577Corn RhizosphereMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAITTIIDTSP*
Ga0074479_1074371153300005829Sediment (Intertidal)MDMSAIADWCTILFLLWYGLKTLIPALGKGYFSTLGGILALAAAITTILDRSA*
Ga0074479_1094937523300005829Sediment (Intertidal)MNMSTIADWCTILFLLWFGLKTFIPALDKGFFSTLGGILALAAALTTFLDRSA*
Ga0074472_1053597333300005833Sediment (Intertidal)MDMPAIADWCTISFFLSFGLKTFIPALDEVFFSTLAGIIALPATVTTFIDRNP*
Ga0068862_10112884523300005844Switchgrass RhizosphereMDMSAISDWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTFIDTSP*
Ga0075428_10048551323300006844Populus RhizosphereMSMSGIVDWLTILFFVWFGLRVFVPSLQKGYFSILGGIIALAAAIALILDTSP*
Ga0075428_10249695223300006844Populus RhizosphereMDYSVIADWLTIAFFLWFGLKKFLPALDQGFFPTLGAILALGAAIFTALST*
Ga0075430_10004970213300006846Populus RhizosphereMDYSVIADWLTIAFFLWFGLKKFLPALDQGFFPTLGAILALGAAIFTAL
Ga0075431_10155186913300006847Populus RhizosphereMDWSAIADWMTILFLLWYGLKTFVPALNKGTATYIGGILALAAAITTFVDRSP*
Ga0073934_1001527263300006865Hot Spring SedimentMSVSGIVDWLTILFFLWVGLKLVVPTLNKDRGFFNILGGIIALAAAIAIILDTSP*
Ga0073934_1003653443300006865Hot Spring SedimentMDFSTIADWMTILFFLWFGLKTLIPALDNRTSSLIGGIIALAAAISIFIDRSP*
Ga0075429_10082367413300006880Populus RhizosphereMDYSVIADWLTIAFFLWFGLKKFLPALDQGFFPTLGAILALGAAIFT
Ga0105095_1026761423300009053Freshwater SedimentMDLSIIADWFTVVFFLWFGLKIFIPALDKGVFQILGGVVALGAALFTALST*
Ga0105098_10000068183300009081Freshwater SedimentMDMSAIADWMTILFFLWYGLKTFIPALQKGPSITIGGIIALAAAITIFLDSSP*
Ga0105098_1005638623300009081Freshwater SedimentMDTSAIADIVTILFFLWYALKTFIPALQKGYFSYLGGVLALIAVIVLFIDRSP*
Ga0102851_1294785113300009091Freshwater WetlandsMINPKISKGENSMDMSVIADWFTILFLLWFGLKHFIPSLDKGFMATVGAVIALAAAVFTA
Ga0075418_1032485723300009100Populus RhizosphereMDWSTIADWTTILFFLWFGLKMLVPSLDKGFYSILGGIIALVAAISIFIDRSP*
Ga0105091_1008579113300009146Freshwater SedimentMDMSAIADWMTILFFLWYGLKVLIPALQKGFFLTLGGIIALAAAIAIFIDRSP*
Ga0114129_1123203123300009147Populus RhizosphereMDMSTIADWCTILFFLWFGLKTLIPALGKGFFSTLGGIIALAAAITTFI
Ga0105092_1001459543300009157Freshwater SedimentMDMSAIADWMTILFFLWYGLKTFIPALQKGPSVTIGGIIALAAAITIFLDSSP*
Ga0105100_1079837913300009166Freshwater SedimentMDRSIIADWFTVVFFLWFGLKIFIPALDKGVFQILGGVVALGAALFTALST*
Ga0105104_1000504463300009168Freshwater SedimentMDLSIIADWFTIAFFLWFGLKYFIPALDKGFFPAVGAVIALAAAVFTALST*
Ga0105104_1004698313300009168Freshwater SedimentMSMSAIVDWLAILFFLWFGLKTFIPALSKGSLSILGGILALAAALSIILDRSP*
Ga0105104_1040127713300009168Freshwater SedimentMSAIADWMTILFFLWYGLKTFIPALQKGPSVTIGGIIALAAAITIFLDSSP*
Ga0105062_112926813300009817Groundwater SandMDMSTIADWMTILFFLWFGLKTLIPALDKGVSSIIGGIIALAAAISIYIDRSP*
Ga0105064_113053113300009821Groundwater SandMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGG
Ga0105078_101113423300009823Groundwater SandLITKEKKIMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAITTFIDRSP*
Ga0105058_116679423300009837Groundwater SandLITKEKKIMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTFIDRSP*
Ga0131077_1153556913300009873WastewaterMNWSAIADWMTILFFLWYGLKMFIPALNQSPSNVIGGILAIAAAISIMLSP*
Ga0126308_1114623323300010040Serpentine SoilMDLSIIADWFTVLFFLWFGLKQFIPALNKGFSLYVGGVIALAAALFTALST*
Ga0134127_1007884143300010399Terrestrial SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLAGIIALAAAVTTFIDTSP*
Ga0137438_109785213300011431SoilMDMSAIADWCTILFFLWFGLKTFVPALDKGFFSTLGGIFALAAALTTILDRSG*
Ga0137452_101586333300011441SoilMDMSVIADWCTILFFLWFGLKKFIPALDKDMFSTIGAILALAAAVFTALST*
Ga0137437_116148723300011442SoilMDISVIADWFTILFFLWYGLKKLIPALDKGFLSTLGAVIALAAAVFTALST*
Ga0137437_124986023300011442SoilMDYSTIADWFTILFFLWFGLKKFIPQLDQGFFSTLGAIIALAAAITTI
Ga0137463_100734833300011444SoilMNMSTIADWCTILFLLWFGLKTFIPALDKGFFSTLGGIFALAAAITTILDRST*
Ga0137355_104986823300012163SoilMDYSTIADWLTILFLLWFGLKKFIPALDKDIFSTIGAIFALAAAVFTALST*
Ga0137357_103524333300012168SoilLWFGLKKFIPALDKDIFSTIGAIFALAAAVFTALST*
Ga0137374_1001571623300012204Vadose Zone SoilMDLSIVADWFTIVFFLWFGLKTFIPALDKGLFQIFGGVIALGAAIFTALST*
Ga0137374_1015411423300012204Vadose Zone SoilMIADWLTILFFLWFGLKTFIPALDKGYFAMLGGIIALGAAITIFIDRTP*
Ga0137459_116787923300012228SoilMDYSTIADWFTIAFLLWFGLKKFIPALDKDIFSTIGAIIALAAAVFTALST*
Ga0137367_1011292823300012353Vadose Zone SoilMDLSIVADWFTIIFFLWFGLKTFIPALDKGLFQIFGGVIALGAAIFTALST*
Ga0137337_105920623300012675SoilMDYSTIADWFTILFFLWFGLKKFIPALDEGYFSTLGAL
Ga0180069_100693543300014882SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFCSTLGGIIALAAAITTFIDRSP*
Ga0180069_102732023300014882SoilMNMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTIIDTSP*
Ga0180085_119631413300015259SoilMSAIADWCTILFFLWFGLKTFIPALDKGLFSTLGGIIALAAAITTFLDRSP*
Ga0184610_116445223300017997Groundwater SedimentMTIAVHHKGEKIMDMSAISDWCTILFFLWFGLKTFIPALDKGFFSILGGIIALAAAVTTFIDSSP
Ga0184608_1011357123300018028Groundwater SedimentMDMSAIADWCTILFFLWFGLKTFIPALDKGLFSTLGGIIALAAAVTTFIDTSP
Ga0184638_102878023300018052Groundwater SedimentMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTFIDSSP
Ga0184626_1002227143300018053Groundwater SedimentMDMSAIADWCTILFLLWYGLKTLIPALNQGFSLTLGGIIALAAAITTFID
Ga0184626_1020481323300018053Groundwater SedimentMDMSAIADWSTILFLLWYGLKTLIPALNQGFSLTLGGILALAAAITTFIDRSP
Ga0184626_1028102413300018053Groundwater SedimentMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTFIDRSP
Ga0184621_1003278333300018054Groundwater SedimentMDMSAISDWCTILFFLWFGLKTFIPALDKGFFSILGGIIALAAAVTTFIDSSP
Ga0184623_1009309323300018056Groundwater SedimentMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTFIDRSP
Ga0184615_1000158063300018059Groundwater SedimentMDYSIIADWFTILFFLWFGLKKFIPALDQGIFPTVGAIIALGAAVFTIMST
Ga0184615_1031138823300018059Groundwater SedimentMDYSTIADWFTILFFLWFGLKNFIPALDKSYFSTLGALLALAAAITTILDRSA
Ga0184619_1037766113300018061Groundwater SedimentMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAITTIIDTR
Ga0184632_1002782523300018075Groundwater SedimentMDMSAISDWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTFIDSSP
Ga0184612_1008513523300018078Groundwater SedimentMDMSAIADWCTILFLLWYGLKTLIPALNQGFSLTLGGIIALAAAITTFIDRSP
Ga0184625_1033673223300018081Groundwater SedimentMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAITTFIDRSP
Ga0184629_1003485723300018084Groundwater SedimentMDMSIIADWFTIIFFLWFGLKKFIPALDKDIFSTFGAIIALAAAIFTALST
Ga0184629_1013933523300018084Groundwater SedimentMSMSTIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAITTILDRSA
Ga0184629_1068100623300018084Groundwater SedimentMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTFIDTSP
Ga0193739_101072723300020003SoilMSGSGIVDWLTILFFAWFGLRVFVPALNKGFFSILGGIIALAAAIAIILDTSP
Ga0193739_104301913300020003SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTIGGIIALAAAVTTFLDRSP
Ga0193739_109432413300020003SoilMDWSTIADWMTILFFLWYGLKTFIPALNKGTAAYIGGAIALLAAISIFIDRSP
Ga0184649_111294013300020068Groundwater SedimentILFFLWFWLKNFIPALDKGYFSTLGALLALAAAITTILDRSA
Ga0210378_1006729623300021073Groundwater SedimentMTIAVHHKGEKIMDMSAISDWCTILFFLWFGLKTFIPAFDKGFFSTLGGIIALAAAVTTFIDSSP
Ga0210377_1008345423300021090Groundwater SedimentMKGDQSMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAISTFIDRSP
Ga0210377_1014600723300021090Groundwater SedimentMQEGENAVDLSIVADWLTILFLLWYGLKQFIPALGKGSFPYVGGVIALAAALFTALST
Ga0210377_1044156113300021090Groundwater SedimentMDYSTIADWFTILFFLWFGLKKFIPALDKDYFSTLGALLALAAAITTILDRSA
Ga0210377_1067501913300021090Groundwater SedimentMDYSTIADWFTILFFLWFGLKNFIPALDKGYFSTLGALLALAAAITTILDRSA
Ga0209126_102821023300025119SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVSTFIDRSP
Ga0209108_1038117413300025165SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAA
Ga0209642_1003116613300025167SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIAL
Ga0209172_1002477233300025310Hot Spring SedimentMDFSTIADWMTILFFLWFGLKTLIPALDNRTSSLIGGIIALAAAISIFIDRSP
Ga0209172_1014816123300025310Hot Spring SedimentMSVSGIVDWLTILFFLWVGLKLVVPTLNKDRGFFNILGGIIALAAAIAIILDTSP
Ga0209431_1001937943300025313SoilMDYSTIADWFTIAFLLWFGLKKFIPALDNDIFSTLGAIIALAAAVFTILST
Ga0209431_1005521723300025313SoilMDMSVVADWFVILFFLWFGLKKFIPALDTGFFPTLGAILALGVALFTLLS
Ga0209323_1008972923300025314SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFTTLGGIIALAAAVSTFIDRSP
Ga0209519_1049761923300025318SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVSTFIDRSESDNASE
Ga0209520_1071337713300025319SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVSTFIDR
Ga0209640_1014852933300025324SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFTTLGGIIALAAAVTTFIDRSP
Ga0207674_1041202023300026116Corn RhizosphereMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAITTIIDTSP
Ga0209878_101843823300027163Groundwater SandLITKEKKIMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTFIDRS
Ga0209842_106623323300027379Groundwater SandMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTIIDTSP
Ga0209077_100426923300027675Freshwater SedimentMDTSAIADIVTILFFLWYALKTFIPALQKGYFSYLGGVLALIAVIVLFIDRSP
Ga0209077_108770323300027675Freshwater SedimentMTMSGVVDWLAILFFLWFGLKTFIPALNKAPLSIVGGILALAAALAIILDTSP
Ga0209819_1000423043300027722Freshwater SedimentLMDMSAIADWMTILFFLWYGLKTFIPALQKGPSVTIGGIIALAAAITIFLDSSP
Ga0209819_1006036223300027722Freshwater SedimentMDMSAIADWMTILFFLWYGLKTFIPALQKGPSITIGGIIALAAAITIFLDSSP
Ga0209819_1018151013300027722Freshwater SedimentMDMSAIADWMTILFFLWYGLKTFIPALQKGPSVTIGGIIA
Ga0209592_119660523300027731Freshwater SedimentMDLSIIADWFTVVFFLWFGLKIFIPALDKGVFQILGGVVALGAALFTALST
Ga0209593_1001347923300027743Freshwater SedimentMDLSIIADWFTIAFFLWFGLKYFIPALDKGFFPAVGAVIALAAAVFTALST
Ga0209593_1004902733300027743Freshwater SedimentMDMSAIADWMTILFFLWYGLKTFIPALQKGPSVTIGGIIALAAAITIFLDSSP
Ga0209593_1009768823300027743Freshwater SedimentMSMSAIVDWLAILFFLWFGLKTFIPALSKGSLSILGGILALAAALSIILDRSP
Ga0209464_1016027413300027778Wetland SedimentMDLSVVADWFTILFLLWYGLKQFIPALGKGFFPYVGGVLALAAALFTALST
(restricted) Ga0233416_1007296423300027799SedimentMSILADWFTIIFFVWFGLKKFIPALDQGFFPTLGAIVALGAAVFTALST
Ga0209798_1010859633300027843Wetland SedimentMGMPAIADWYTILFFLSFGLKTFIPALDKGFFSTLAAIIALPATVTTFIDRNP
Ga0208980_1078593513300027887WetlandDWFTILFFLWFGLKKFIPILDKNVSQTIGAIIALAAAFFTLLST
Ga0209382_1099459013300027909Populus RhizosphereMDWSAIADWMTILFLLWYGLKTFVPALNKGTATYIGGILALAAAITTFVDRSP
(restricted) Ga0233418_1010715713300027995SedimentMDYSIIADWFTIAFFLWFGLKKFIPALDKGFFPTVGAVIALFAGVFTIFSM
(restricted) Ga0233418_1019693023300027995SedimentMDMSVIADWFTIIFFAWFGLKKFIPALDQGFFPTLGAIIALGAAVFTALST
Ga0308181_103961723300031099SoilMDMSAIADWCTILFFLWFGLKTFIPALDKGFFSTLGGIIALAAAVTTFI
Ga0247727_1003531873300031576BiofilmMDMSKIADWCTILFFLWFGLKKFVPALDKDIFSTLGAIIALAAAVFTALSI
Ga0247727_1040315123300031576BiofilmMDMSVVADWFTILFFAWFGLKKFIPALDQGFFPTLGAIIALGAAVFTALSA
Ga0315297_1016661423300031873SedimentMDYSIIADWFTILFFLWFGLKRFIPALDKRFLSALGAIIALLAAVFTALST
Ga0315297_1045201923300031873SedimentMDYSVIADWFTILFLLWFGLKRFIPALDKRFFSALGAIIALLAAVFTILST
Ga0214473_1076338813300031949SoilMDMSVVADWFVILFFLWFGLKKFIPALDTGFFPTLGAILALGVALFTFLS
Ga0315284_1005946243300032053SedimentMDLSTIADWFTILFFLWFGLKKFIPVLDKNLFQTIGAIIALLAAIFTFLSP
Ga0315295_1123757113300032156SedimentMDYSVIADWFTILFFLWFGLKRFIPALDKRFFSVLGALVALLAAVFTILST
Ga0315275_1121492513300032401SedimentMNLSTIADWFTILFFLWFGLKKFIPVLDKNLFQTIGAIIALLAAVFTFLSP
Ga0214471_1016262243300033417SoilMSAIADWCTILFFLWFGLKTFIPALDKGFFSALGGIIALAAAVTTFLDRSP
Ga0316630_1116920213300033487SoilMDLSVVADWLTVLFLAWFGLKKFIPALDQGIFATTGAVLALGAAV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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