NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065312

Metagenome / Metatranscriptome Family F065312

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065312
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 50 residues
Representative Sequence MSKKKNPKPKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGRELDE
Number of Associated Samples 33
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 85.83 %
% of genes near scaffold ends (potentially truncated) 13.39 %
% of genes from short scaffolds (< 2000 bps) 50.39 %
Associated GOLD sequencing projects 28
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.929 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen
(75.591 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(92.913 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.26%    β-sheet: 0.00%    Coil/Unstructured: 89.74%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF07728AAA_5 9.45
PF14284PcfJ 1.57
PF10269Tmemb_185A 1.57
PF05014Nuc_deoxyrib_tr 0.79
PF02540NAD_synthase 0.79
PF10544T5orf172 0.79
PF06941NT5C 0.79
PF00004AAA 0.79
PF00149Metallophos 0.79
PF08239SH3_3 0.79
PF13455MUG113 0.79
PF10145PhageMin_Tail 0.79
PF12874zf-met 0.79
PF02518HATPase_c 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 0.79
COG3613Nucleoside 2-deoxyribosyltransferaseNucleotide transport and metabolism [F] 0.79
COG45025'(3')-deoxyribonucleotidaseNucleotide transport and metabolism [F] 0.79


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.93 %
All OrganismsrootAll Organisms33.07 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2061766007|rumenHiSeq_NODE_1588622_len_86230_cov_1_074394Not Available86280Open in IMG/M
2061766007|rumenHiSeq_NODE_3555768_len_25345_cov_0_846084Not Available25395Open in IMG/M
2061766007|rumenHiSeq_NODE_3655088_len_22020_cov_1_698093All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.22070Open in IMG/M
2061766007|rumenHiSeq_NODE_3832373_len_32624_cov_1_392411Not Available32674Open in IMG/M
2061766007|rumenHiSeq_NODE_4166104_len_39419_cov_1_068241Not Available39469Open in IMG/M
2061766007|rumenHiSeq_NODE_4307003_len_78378_cov_1_117724Not Available78428Open in IMG/M
2084038000|BRPC2_GFP31SK02HJ0X5Not Available544Open in IMG/M
3300009872|Ga0130079_12168190Not Available690Open in IMG/M
3300012983|Ga0123349_10461704Not Available883Open in IMG/M
3300014057|Ga0120384_1139129Not Available841Open in IMG/M
3300021254|Ga0223824_10001533Not Available27591Open in IMG/M
3300021254|Ga0223824_10002496All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.20965Open in IMG/M
3300021254|Ga0223824_10010205Not Available9309Open in IMG/M
3300021254|Ga0223824_10020015All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.6362Open in IMG/M
3300021254|Ga0223824_10065093All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.3342Open in IMG/M
3300021254|Ga0223824_10073015Not Available3140Open in IMG/M
3300021254|Ga0223824_10096492Not Available2700Open in IMG/M
3300021254|Ga0223824_10654041Not Available831Open in IMG/M
3300021255|Ga0223825_11323260All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales189572Open in IMG/M
3300021255|Ga0223825_11330248All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.2658Open in IMG/M
3300021255|Ga0223825_11460499Not Available1396Open in IMG/M
3300021255|Ga0223825_11460500Not Available1029Open in IMG/M
3300021387|Ga0223845_11189228All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae179940Open in IMG/M
3300021387|Ga0223845_11298010Not Available24744Open in IMG/M
3300021387|Ga0223845_11951757Not Available712Open in IMG/M
3300021399|Ga0224415_11156115Not Available546Open in IMG/M
3300021400|Ga0224422_10770791All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.7486Open in IMG/M
3300021400|Ga0224422_12302207Not Available9378Open in IMG/M
3300021426|Ga0224482_10011538Not Available8682Open in IMG/M
3300021426|Ga0224482_11055883Not Available559Open in IMG/M
3300024337|Ga0255060_10179215Not Available1022Open in IMG/M
3300024342|Ga0255061_10026295Not Available2554Open in IMG/M
3300024342|Ga0255061_10047914All Organisms → Viruses → Predicted Viral1985Open in IMG/M
3300024342|Ga0255061_10073620All Organisms → Viruses → Predicted Viral1647Open in IMG/M
3300024342|Ga0255061_10118822All Organisms → Viruses → Predicted Viral1323Open in IMG/M
3300024342|Ga0255061_10133492All Organisms → Viruses → Predicted Viral1251Open in IMG/M
3300024342|Ga0255061_10252633Not Available913Open in IMG/M
3300024342|Ga0255061_10489624Not Available644Open in IMG/M
3300024345|Ga0255062_10226741Not Available891Open in IMG/M
3300024345|Ga0255062_10452077Not Available623Open in IMG/M
3300024486|Ga0255059_10000078Not Available17167Open in IMG/M
3300024486|Ga0255059_10008346All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.3514Open in IMG/M
3300028591|Ga0247611_10000153Not Available141913Open in IMG/M
3300028591|Ga0247611_10002381Not Available30485Open in IMG/M
3300028591|Ga0247611_10002518Not Available29362Open in IMG/M
3300028591|Ga0247611_10003476Not Available23308Open in IMG/M
3300028591|Ga0247611_10010565Not Available10832Open in IMG/M
3300028591|Ga0247611_10012381All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.9689Open in IMG/M
3300028591|Ga0247611_10094299All Organisms → Viruses → Predicted Viral3088Open in IMG/M
3300028591|Ga0247611_10102645Not Available2960Open in IMG/M
3300028591|Ga0247611_10104923All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.2927Open in IMG/M
3300028591|Ga0247611_10581775Not Available1196Open in IMG/M
3300028591|Ga0247611_10620359Not Available1151Open in IMG/M
3300028591|Ga0247611_10654277Not Available1115Open in IMG/M
3300028591|Ga0247611_11426543Not Available680Open in IMG/M
3300028591|Ga0247611_11665295Not Available612Open in IMG/M
3300028591|Ga0247611_11873887Not Available563Open in IMG/M
3300028591|Ga0247611_11932137Not Available551Open in IMG/M
3300028797|Ga0265301_10000053Not Available181400Open in IMG/M
3300028797|Ga0265301_10000500All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.57168Open in IMG/M
3300028797|Ga0265301_10001871All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.26094Open in IMG/M
3300028797|Ga0265301_10004558All Organisms → Viruses13950Open in IMG/M
3300028797|Ga0265301_10058606All Organisms → Viruses → Predicted Viral2974Open in IMG/M
3300028797|Ga0265301_10074286All Organisms → Viruses → Predicted Viral2607Open in IMG/M
3300028797|Ga0265301_10363542Not Available1083Open in IMG/M
3300028805|Ga0247608_10115591All Organisms → Viruses → Predicted Viral2556Open in IMG/M
3300028805|Ga0247608_10268560Not Available1685Open in IMG/M
3300028805|Ga0247608_10291810All Organisms → Viruses → Predicted Viral1614Open in IMG/M
3300028805|Ga0247608_10883810Not Available841Open in IMG/M
3300028805|Ga0247608_11401019Not Available615Open in IMG/M
3300028805|Ga0247608_11814993Not Available510Open in IMG/M
3300028832|Ga0265298_10001774All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.31548Open in IMG/M
3300028832|Ga0265298_10002545Not Available25211Open in IMG/M
3300028832|Ga0265298_10010024Not Available11240Open in IMG/M
3300028832|Ga0265298_10010760Not Available10780Open in IMG/M
3300028832|Ga0265298_10257739All Organisms → Viruses → Predicted Viral1653Open in IMG/M
3300028833|Ga0247610_10016908All Organisms → Viruses7219Open in IMG/M
3300028833|Ga0247610_10051837Not Available4004Open in IMG/M
3300028833|Ga0247610_10123112Not Available2611Open in IMG/M
3300028833|Ga0247610_10150005Not Available2368Open in IMG/M
3300028833|Ga0247610_10160358All Organisms → Viruses → Predicted Viral2292Open in IMG/M
3300028833|Ga0247610_10240557Not Available1874Open in IMG/M
3300028833|Ga0247610_10313879Not Available1636Open in IMG/M
3300028833|Ga0247610_10442084Not Available1362Open in IMG/M
3300028833|Ga0247610_10865890All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.923Open in IMG/M
3300028833|Ga0247610_11307652Not Available711Open in IMG/M
3300028833|Ga0247610_11989827Not Available533Open in IMG/M
3300028887|Ga0265299_10443608All Organisms → Viruses → Predicted Viral1100Open in IMG/M
3300028887|Ga0265299_10531993Not Available996Open in IMG/M
3300028887|Ga0265299_11092508Not Available662Open in IMG/M
3300028887|Ga0265299_11541887Not Available538Open in IMG/M
3300028888|Ga0247609_10024123Not Available5541Open in IMG/M
3300028888|Ga0247609_10024399All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.5507Open in IMG/M
3300028888|Ga0247609_10115786All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.2622Open in IMG/M
3300028888|Ga0247609_10144957Not Available2364Open in IMG/M
3300028888|Ga0247609_10210827All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.1987Open in IMG/M
3300028888|Ga0247609_10541802All Organisms → Viruses → Predicted Viral1233Open in IMG/M
3300028888|Ga0247609_11828893Not Available578Open in IMG/M
3300028888|Ga0247609_11971229Not Available549Open in IMG/M
3300028888|Ga0247609_12029904Not Available537Open in IMG/M
3300030772|Ga0061013_10700712Not Available574Open in IMG/M
3300031760|Ga0326513_10003095Not Available12131Open in IMG/M
3300031760|Ga0326513_10010638All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.6557Open in IMG/M
3300031853|Ga0326514_10816282Not Available818Open in IMG/M
3300031867|Ga0326511_10044658All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.3778Open in IMG/M
3300031992|Ga0310694_10297605Not Available1653Open in IMG/M
3300031992|Ga0310694_10577332All Organisms → Viruses → Predicted Viral1144Open in IMG/M
3300031992|Ga0310694_11742580Not Available554Open in IMG/M
3300031992|Ga0310694_11884699Not Available523Open in IMG/M
3300031993|Ga0310696_10015920Not Available8488Open in IMG/M
3300031993|Ga0310696_10237685All Organisms → Viruses → Predicted Viral1987Open in IMG/M
3300031994|Ga0310691_10174305All Organisms → Viruses → Predicted Viral2315Open in IMG/M
3300031994|Ga0310691_10243084Not Available1965Open in IMG/M
3300031998|Ga0310786_10194824Not Available2331Open in IMG/M
3300032030|Ga0310697_10023551All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.5619Open in IMG/M
3300032030|Ga0310697_10029439Not Available5038Open in IMG/M
3300032030|Ga0310697_10542472Not Available1206Open in IMG/M
3300032030|Ga0310697_10817542Not Available946Open in IMG/M
3300032038|Ga0326512_10021558All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.4756Open in IMG/M
3300032038|Ga0326512_10046987All Organisms → Viruses → Predicted Viral3280Open in IMG/M
3300033463|Ga0310690_10212235Not Available2210Open in IMG/M
3300033463|Ga0310690_10550894All Organisms → Viruses → Predicted Viral1305Open in IMG/M
3300033463|Ga0310690_10908814Not Available983Open in IMG/M
3300033463|Ga0310690_11217117Not Available829Open in IMG/M
3300033463|Ga0310690_11434452Not Available752Open in IMG/M
3300033463|Ga0310690_11502691Not Available731Open in IMG/M
3300033463|Ga0310690_11955753Not Available624Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen75.59%
Cattle And Sheep RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen15.75%
Bovine RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen5.51%
FecalHost-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal0.79%
RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen0.79%
Sheep RumenHost-Associated → Mammals → Digestive System → Foregut → Rumen → Sheep Rumen0.79%
Fungi-Associated Bovine RumenHost-Associated → Mammals → Digestive System → Foregut → Unclassified → Fungi-Associated Bovine Rumen0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2061766007Bovine rumen microbial communities fromthe University of Illinois at Urbana-Champaign, USA, that are switchgrass associated - Sample 470Host-AssociatedOpen in IMG/M
2084038000Bovine rumen viral communities from University of Illinois Dairy Farm in Urbana, IL, Cow rumen 7664Host-AssociatedOpen in IMG/M
3300009872Cow rumen microbiome (microbial/fungal) from cows held on UI at Urbana campus farm, Champaign, IL - Switchgrass. Combined Assembly of Gp0148675, Gp0148676Host-AssociatedOpen in IMG/M
3300012983Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung C2 Day 2 MetagenomeHost-AssociatedOpen in IMG/M
3300014057Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1208Host-AssociatedOpen in IMG/M
3300021254Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021255Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021387Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021399Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021400Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assemblyHost-AssociatedOpen in IMG/M
3300021426Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assemblyHost-AssociatedOpen in IMG/M
3300024337Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 RNA GHGlow gp2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300024342Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 RNA GHGhigh gp2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300024345Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 RNA GHGhigh gp2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300024486Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 RNA GHGlow gp2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300028591Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2Host-AssociatedOpen in IMG/M
3300028797Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04Host-AssociatedOpen in IMG/M
3300028805Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2Host-AssociatedOpen in IMG/M
3300028832Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_01Host-AssociatedOpen in IMG/M
3300028833Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2Host-AssociatedOpen in IMG/M
3300028887Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02Host-AssociatedOpen in IMG/M
3300028888Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2Host-AssociatedOpen in IMG/M
3300030772Coassembly of Cow X SwitchgrassHost-AssociatedOpen in IMG/M
3300031760Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518Host-AssociatedOpen in IMG/M
3300031853Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518Host-AssociatedOpen in IMG/M
3300031867Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518Host-AssociatedOpen in IMG/M
3300031992Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2 (v2)Host-AssociatedOpen in IMG/M
3300031993Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02 (v2)Host-AssociatedOpen in IMG/M
3300031994Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2)Host-AssociatedOpen in IMG/M
3300031998Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2)Host-AssociatedOpen in IMG/M
3300032030Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2)Host-AssociatedOpen in IMG/M
3300032038Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518Host-AssociatedOpen in IMG/M
3300033463Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04 (v2)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
_HiSeq_111350402061766007Bovine RumenMSKKPKVTPKTWTEVFQSQRKEFPQGYCVTRVIPDKRYKKPKYKGRELDY
_HiSeq_224162302061766007Bovine RumenMSKKRNPKTKTWIEVFQSERKTFPMGYCVTRIIPDKRNRKPKHKLKEWE
_HiSeq_225294802061766007Bovine RumenMSKKKNPKPKTWVEVFQAERKEFPQGYCVMRIIPDKRNRKPKHKGRELEE
_HiSeq_212821302061766007Bovine RumenMGKKKKQKPKTWVEVFQSERKTFPQGYCVSRVIEDKRNKPPKHKKGWDEE
_HiSeq_074623302061766007Bovine RumenMRKKIKQAAKTWIEVFQGQRKQFPQGCAVTRIIPDKRFKQPKYKGKEWE
_HiSeq_097141702061766007Bovine RumenMSKKKNRKPKTWVEVFQSERREFPQGYCVTRIREDKRRKKPKYRKVDDE
BRPC2_001955202084038000Bovine RumenMSKKKNSKPKTWIEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGKEFEE
Ga0130079_1216819013300009872RumenMSKKKNPKTKTWVEVFQSERKEFPMGYCVTRIIPDKRHKKEKYKLKGWEE*
Ga0123349_1046170423300012983FecalMILLGGEIMSKKKKPTPKTWVEVFQSERKEFPQGYCVTRIIPDKRRRPPKHKGRELDE*
Ga0120384_113912943300014057Sheep RumenMSKKKNPKQKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREFDE*
Ga0223824_10001533403300021254Cattle And Sheep RumenMSKKKNSKQKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREFDE
Ga0223824_10002496223300021254Cattle And Sheep RumenMAKKNNKPKTWVEVFQSERKQFPSGYCVTRVIPDKRRKNPKHKGKEFDE
Ga0223824_10010205153300021254Cattle And Sheep RumenMSKSKKKQQPKTWAEVFQAQRKEFPQGYCVTRIIPDKRFKKPKYKGREFGE
Ga0223824_1002001563300021254Cattle And Sheep RumenMSKKAKKQPKTWVEVFQSERKEFPQGYCITRIIPDKRNKKPKHKGREFEE
Ga0223824_1006509333300021254Cattle And Sheep RumenMSKKQKPTPKTWVEVFQGERKEFPQGYCVTRIIPDKRNKKPKHKGREFDD
Ga0223824_1007301583300021254Cattle And Sheep RumenMGKKKNPKPKTWVEVFQSERKEFPQGYCVTKIIPDKRRKPPKHKGKEFDE
Ga0223824_1009649233300021254Cattle And Sheep RumenMSKSKKQQPKTWAEVFQAQRKEFPQGYCVTRIIPDKRKKAPKHKGREFEE
Ga0223824_1065404123300021254Cattle And Sheep RumenMSGGENMSKKQKQTPKSWVEVFQRERKEFPQGYCVTRIIPDKRKKAPKHKGREFKK
Ga0223825_113232602143300021255Cattle And Sheep RumenMQGGDKMSKKQKPTPKTWVEVFQGERKEFPQGYCVTRIIPDKRKKAPKHKEREFDD
Ga0223825_1133024843300021255Cattle And Sheep RumenMSKSKKKQQPKTWAEVFQAQRKEFPQGYCVTRIIPDKRFKKPKYKGREFDG
Ga0223825_1146049953300021255Cattle And Sheep RumenMAKKNNKPKTWVEVFQSERKQFPSGYCVTRVIPDKRRKNPKHKGREFDE
Ga0223825_1146050033300021255Cattle And Sheep RumenMAKKNNKPKTWVEVFQSERKQFPSGYCVTRVIPDKRRKNPKHKGREFEE
Ga0223845_111892283263300021387Cattle And Sheep RumenMSKRTKKQQPKTWVEVFQSERKEFPQGYCVTRIIPDKRFKKPKHKGKEFDE
Ga0223845_11298010363300021387Cattle And Sheep RumenMGKKKNLKPKTWVEVFQSERKEFPQGYCVTKIIPDKRRKPPKHKEKEFDE
Ga0223845_1195175723300021387Cattle And Sheep RumenMSKSKKKQQPKTWAEVFQAQRKEFPQGYCVTRIIPDKRRKAPKYKGREFDE
Ga0224415_1115611513300021399Cattle And Sheep RumenRTKKQQPKTWVEVFQSERKEFPQGYCVTRIIPDKRFKKPKHKGKEFDE
Ga0224422_1077079123300021400Cattle And Sheep RumenMSKKQKPTPKTWVEVFQGERKEFPQGYCVTRIIPDKRKKAPKHKEREFDD
Ga0224422_12302207243300021400Cattle And Sheep RumenMSKKQKPTPKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREFDD
Ga0224482_10011538183300021426Cattle And Sheep RumenMSKKNKNKQKTWIEVFQSERKAFPQGYCVTRVIPDKRNKPPKHKGKEFDE
Ga0224482_1105588333300021426Cattle And Sheep RumenMSKKAKKQPKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREFEE
Ga0255060_1017921513300024337RumenMSKSKKKQQPKTWTEVFQSQRKEFPQGYCVTRIIPDKRKKKPKHKGREYEE
Ga0255061_1002629593300024342RumenMSKKKNPKQKTWVEVFQSERKKFPQGYCVTRIIPDKRRKPPKHKGRELE
Ga0255061_1004791473300024342RumenEWTMSKKGKQKPKTWIEIFQTERKSFPEGYCVTRVREDKRRKKPKHKGRELDE
Ga0255061_1007362043300024342RumenMSKKKNPKQKTWVEVFQSERKEFPQGYCVTRIIPDKRKKKPKHKGRELEE
Ga0255061_1011882213300024342RumenMSKKVKKQPKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREFADHLIDVCGV
Ga0255061_1013349263300024342RumenVMSKKKQPKQKSWVEVFQSERKQFPQGYCVTRIIPDKRNKKPKYKGREFDE
Ga0255061_1025263313300024342RumenSKKQKPTPKTWVEVFQGERKEFPQGYCVTRIIPDKRRKAPKHKGRELEE
Ga0255061_1048962413300024342RumenMSKKKNPKQKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREFEE
Ga0255062_1022674113300024345RumenKKKKPKPKTWIEVFQSERKEFPQGYCVTKIIPDKRRKPPKHKGKEFDE
Ga0255062_1045207733300024345RumenWTMSKKGKQKPKTWIEIFQTERKSFPEGYCVTCVREDKRRKKPKHKGRELDE
Ga0255059_10000078233300024486RumenMSKKKQPKQKSWVEVFQSERKQFPQGYCVTRIIPDKRNKKPKYKGREFDE
Ga0255059_1000834653300024486RumenMSKKKKQPKTWVEVFQSERKEFPQGYCVTRVIPDKRNKKPKHKGKELE
Ga0247611_100001531013300028591RumenMSKKKNPKQKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREFADHLIDVCGV
Ga0247611_10002381423300028591RumenMVKKSKRNPKTWAEVFQSQRKQFPQGYCVTRIIPDKRFKKPKHKERMYE
Ga0247611_10002518373300028591RumenMGKKKKPKPKTWIEVFQSERKEFPQGYCVTKIIPDKRRKPPKHKGKEFDE
Ga0247611_10003476223300028591RumenMSKKKNPKQKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGRELEE
Ga0247611_10010565133300028591RumenMSKKKTRNPKPKTWVEVFQSERKEFPQGYCVTRIIPDKRHKKPKHKGRGREFEE
Ga0247611_10012381223300028591RumenMSKKQKPTPKTWVEVFQGERKEFPQGYCVTRIIPDKRRKAPKHKGRELEE
Ga0247611_1009429963300028591RumenMKQKKQKEKTWTEIFQSERKTFPKGYCVTRIIPDKRRKPPKHKGKEVEDNAD
Ga0247611_1010264583300028591RumenMSKAKKKQQPKTWAEVFQSQRKEFPQGYCVTRVIPDKTKYNRKEKHKKGWDE
Ga0247611_1010492343300028591RumenMNKSKKKQQPKTWTEVFQSQRKEFPQGYCVTRIIPDKRHKKPKYKGREFEE
Ga0247611_1058177553300028591RumenMSKKKNPKQKTWVEVFQSERKEFPQGYCVTRIIPDKRHKKPKHKGRKFADHLIDVCGVLGGR
Ga0247611_1062035923300028591RumenMSKKKNPKQKTWVEVFQSKRKEFPQGYCVTRIIPDKRNKKPKHKGRELEE
Ga0247611_1065427753300028591RumenMSKGDVSMSKNKKKQQPKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREFEE
Ga0247611_1142654343300028591RumenMSKKKNPKPKTWVEVFQFERKEFPQGYCVTRIIPDKRNKKPKHKGRELDE
Ga0247611_1166529523300028591RumenMSKKKNRPKTWVEVFQSERKEFPQGYCVTRIIPDKRRKKPKHKGRELEE
Ga0247611_1187388723300028591RumenMSKKGKQKPKTWIEIFQTERKSFPEGYCVTRVREDKRRKKPKHKGRELDE
Ga0247611_1193213733300028591RumenMSKKKQPKQKSWVEVFQSERKQFPQGYCVTRIIPDKRKKKPKHKGRYDEE
Ga0265301_100000532263300028797RumenMFMKGRDTMKMKGKHGTKTWVEVFQSERKTFPQGCCVTRVREDKRKKPPKYKGRELDY
Ga0265301_10000500563300028797RumenMGKKKKQKPKTWVEVFQSERKTFPQGYCVSRVIEDKRNKPPKHKKGWEEE
Ga0265301_10001871293300028797RumenMSKPKKQSKTWVEVFQAERKTFPQGYCVTRVIPDKRHRKPKYKGKELDY
Ga0265301_10004558173300028797RumenMSKKRNQKPKTWVEVFQAERKFFPQGYCVTRVREDARRKPPKHKGRELDY
Ga0265301_1005860663300028797RumenMSKKKCKTWTEIFQSERKQFPQGCCVTRVIPDKRNKKPKYKLKEFNE
Ga0265301_1007428643300028797RumenMSKKKNPKPKTWVEVFQAERREFPQGYCVTRVIPDKRFKKPKYKGREWK
Ga0265301_1036354253300028797RumenRKGTMMSKKGKQKSKTWVEVFQSERKEFPMGYCVTRIIPDKRHKKPKYKLKEYEA
Ga0247608_1011559173300028805RumenMSKKKNPKQKTWVEVFQSERKEFPMGYCVTRIIPDKRNKKPKHKGRELDE
Ga0247608_1026856023300028805RumenMSKRTKKQQPKTWVEVFQSERKEFPQGYCVTRIIPDKTKYNRKEKHKKGWDD
Ga0247608_1029181063300028805RumenMMSKKKSQKPKTWAEVFQAQRKDFPQGYCVTRIIPDKRHKKPKHKGRELEE
Ga0247608_1088381023300028805RumenMMSKSKKKQQPKTWAEVFQAQRKEFPQGYCVTRIIPDKRKKAPKHKGREFEE
Ga0247608_1140101923300028805RumenMSKKKNPKQKTWAEVFQSERKEFPQGYCVTRVIPDKRNKKPKHKGRELEE
Ga0247608_1181499313300028805RumenMSKKKNPKQKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREYDE
Ga0265298_10001774283300028832RumenMSRRKNKTKTWVEVFQAERKAFPQGYCVTRIIPDKRHKKEKYKLKGWEE
Ga0265298_10002545263300028832RumenMSKKRNPKTKTWVEVFQSERKTFPMGYCVTRVIPDKRNRKPKHKLKEWE
Ga0265298_10010024253300028832RumenMAMSQKRKQKPKTWVEVFQSERKTFPQGYCVTRIREDKRKKQPKHKLKEWE
Ga0265298_10010760203300028832RumenMSKKQKPKSYVEIFQSQRREFPQGYCVTRIIPDKRHKKPKHKGREYEA
Ga0265298_1025773923300028832RumenMSKKGNPKTKTWVEVFQAERKEFPQGYCVTRIIPDKRFKKPKYKGKEWD
Ga0247610_10016908113300028833RumenMSKKKNPKPKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGRELDE
Ga0247610_1005183763300028833RumenMSKKQKQTPKSWVEVFQRERKEFPQGYCVTRIIPDKRKKASKHKGREFEE
Ga0247610_1012311213300028833RumenMSKSKKKQQPKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREFDD
Ga0247610_1015000533300028833RumenMGKKKNPKPKTWVEVFQSERKEFPQGYCVTRIIPDKRFKKPKHKGREFDD
Ga0247610_1016035873300028833RumenMSKKKTPKEKTWTEVFQAERKTFPQGYCVTRIIPDKRKKEPKHKGKEWDE
Ga0247610_1024055733300028833RumenMSKTKKKQQPKTWAEVFQSQRKEFPQGYCVTRVIPDKTKYNRKEKHKKGWDE
Ga0247610_1031387943300028833RumenMSKSKKKQQPKTWTEVFQSQRKEFPQGYCVTRIIPDKRNKKPKHKGREFEE
Ga0247610_1044208453300028833RumenMSKSKKKQQPKTWTEVFQSQRREFPQGYCVTRIIPDKRHKKPKHKGREFEE
Ga0247610_1086589033300028833RumenMSKSKKKQQPKTWAEVFQAQRKEFPQGYCVTRIIPDKRFKKPKYKERYDNE
Ga0247610_1130765233300028833RumenMSKKKNPKQKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGRELED
Ga0247610_1198982713300028833RumenMSKHTKKQQPKTWVEVFQSERKEFPQGYCVTRIIPDKTRYNRKE
Ga0265299_1044360853300028887RumenMSKKKNPKPKTWVEVFQSERKEFPMGYCVTRVIPDKRNCKPKHKGRELDE
Ga0265299_1053199343300028887RumenMGKKKQRSKTWIEVFQSEHREFPQGCCVTRVIPDKRYKKPKHKGRSWDE
Ga0265299_1109250823300028887RumenMSKKKNKNKPKTYVEIFQSERREFPQGYCVTRVIPDKRNKPPKH
Ga0265299_1154188713300028887RumenVIMYMKGRDSMSKKKNPKTKTWVEVFQSERKEFPMGYCVTRIIPDKRRKKEKYKLKGWEE
Ga0247609_10024123103300028888RumenVSKKKNPKQKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGRELEE
Ga0247609_1002439983300028888RumenMSKKKNPKQKTWVEVFQSERKEFPQGYCVTRIIPDKRKKKPKYKGREFEE
Ga0247609_1011578613300028888RumenMSKKVKKQPKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKHKGREFADHLIDVC
Ga0247609_1014495723300028888RumenMSKSKKKQQPKTWVEVFQAERKEFPQGYCVTRIIPDKRNKKPKHKGREFDD
Ga0247609_1021082763300028888RumenMSKKQKQNPKTWTEVFQSQRKEFPQGYCVTRIIPDKRKKEPKHKKGWDEE
Ga0247609_1054180223300028888RumenMSKSKKKQQPKTWTEVFQSQRKEFPQGYCVTRIIPDKRNKKPKHKGREFADHLIDVCGV
Ga0247609_1182889313300028888RumenMSKSKKKQQPKTWVEVFQAERKEFPQGYCVTRIIPDKRNKKPKHKGREFDE
Ga0247609_1197122923300028888RumenMSKKKNRPKTWVEVFQSERKEFPQGYCVTRIIPDKRRKKPKH
Ga0247609_1202990413300028888RumenMSKSKKKQQPKTWTEVFQSQRREFPQGYCVTRIIPDKRNKKPKHKGREFADHLIDVCGV
Ga0061013_1070071213300030772Fungi-Associated Bovine RumenMSKKKNPKTKTWVEVFQSERKEFPMGYCVTRIIPDKRHKKEKYKLKGWEE
Ga0326513_10003095193300031760RumenMSKKVKNKTWVEVFQSERKVFPQGCCATRVIPDKRHKQEKHKKKIYEE
Ga0326513_10010638103300031760RumenMSKKAKKQPKTWVEVFQSERREFPQGYCVTRIIPDKRNKKPKHKGKEFDD
Ga0326514_1081628223300031853RumenMSKSKKKQQPKTWAEVFQSQRKEFPQGYCVTRIIPDKRFKKPKHKGKELEE
Ga0326511_1004465843300031867RumenMSKPKSPKPKTWVEVAQSQRREFPAGCCVTKVIPDKRKKPPKYPRKWD
Ga0310694_1029760523300031992RumenMSKATKKQQPKTWAEVFQSQRKEFPQGYCVTRVIPDKTKYNRKEKHKKGWDE
Ga0310694_1057733253300031992RumenMSKSKKKQQPKTWAEVFQAQRKEFPQGYCVTRIIPDKRFKKPK
Ga0310694_1174258023300031992RumenMSKHTKKQQPKTWVEVFQSERKEFPQGYCVTRIIPDKTRYNRKEKHKKGWDE
Ga0310694_1188469913300031992RumenMQGGDEMSKKQKPTPKTWVEVFQGERKEFPQGYCVTRIIPDKRNKKPKHKGREFDD
Ga0310696_10015920213300031993RumenMSKQNRKSKTWVEVFQSERKTFPQGYCVTRVREDKRRKSPKHKGRELDE
Ga0310696_1023768573300031993RumenMMSKKQKPKSYVEIFQSQRREFPQGYCVTRIIPDKRHKKPKHKGREYEV
Ga0310691_1017430513300031994RumenMSKKKNPKQKTWAEVFQSERKEFPQGYCVTRVIPDKRNKKPKHKGRELE
Ga0310691_1024308413300031994RumenISVSGGDNMSKKQKQTPKSWVEVFQRERKEFPQGYCVTRIIPDKRKKAPKHKGREFEE
Ga0310786_1019482473300031998RumenMMSKKGKQKSKTWVEVFQSERKEFPMGYCVTRIIPDKRHKKPKYKLKEYEA
Ga0310697_1002355153300032030RumenVSKKSKKPKTWVEVFQSERKEFPQGYCVTRIIPDKRNKRPKHKGREFEE
Ga0310697_10029439143300032030RumenMSKKKPKTWIEVFQKERKQFPQGYCVTRIIPDKRNKKPKHKGREFEE
Ga0310697_1054247223300032030RumenMAKKKNKPKTWVEVFQAERKQFPSGYCVTRVIPDKRRKDPKHKGREFEE
Ga0310697_1081754223300032030RumenMSKKSKKPKTWVEVFQSERKEFPQGYCVTRIIPDKRNKKPKYKGREFEE
Ga0326512_10021558133300032038RumenMSKSKKKQQPKTWAEVFQSQRKEFPQGYCVTRIIPDKRFKKPKYKGRMDEE
Ga0326512_1004698753300032038RumenMSKKAKKQPKTWVEVFQSEHREFPQGYCVTRIIPDKRRKPPKYKGRYED
Ga0310690_1021223523300033463RumenMSKVKNPKTKTWVEVFQAERKSFPQGYCVTRVREDKRYKKPKYKLKGWE
Ga0310690_1055089423300033463RumenMSRRKNKTKTWVEVFQSERKTFPQGYCVTRIVPDKRHKKEKYKLKGWEE
Ga0310690_1090881423300033463RumenMSKKQSQKVKTWVEIVKSERRVFPQGYCVTRIIPDKRNRKPKHKRREFDV
Ga0310690_1121711713300033463RumenMSKKGNQKSKTWVEVFQSERKTFPMGYCVTRIREDKRRKKPKYKEREYEV
Ga0310690_1143445233300033463RumenMMSKKRNQKSKTWVEVFQSERKTFPQGYCVTRVREDKRRKPPKHKGRELDD
Ga0310690_1150269123300033463RumenMGKKITGKQQTKTWVEVFQSERKEFPQGYCVTRIIPDKRRKKPKHKGR
Ga0310690_1195575333300033463RumenMCKKKNKQKTWVEVFKSERKEFPQGYCVTRIIPDKRFKKPKYKGRDWE


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