Metagenome / Metatranscriptome Family F065250

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065250
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	104 residues
Representative Sequence	VATPSAKTTNEMPALAQKFREQLLSTVQQGQQMSIDAAQTWVKAVSVLPAVDLPKIPGIPDLPNLEAATKYTFDVAADLLNAQREFAVQLTNTLVPAKTA
Number of Associated Samples	104
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.09 %
% of genes near scaffold ends (potentially truncated)	32.81 %
% of genes from short scaffolds (< 2000 bps)	82.81 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.031 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (27.344 % of family members)
Environment Ontology (ENVO)	Unclassified (35.156 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.594 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.56% β-sheet: 0.00% Coil/Unstructured: 48.44%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01381	HTH_3	27.34
PF13561	adh_short_C2	18.75
PF07167	PhaC_N	7.03
PF13560	HTH_31	4.69
PF00106	adh_short	2.34
PF01565	FAD_binding_4	1.56
PF00561	Abhydrolase_1	0.78
PF02899	Phage_int_SAM_1	0.78
PF10009	DUF2252	0.78
PF07311	Dodecin	0.78
PF12697	Abhydrolase_6	0.78
PF13480	Acetyltransf_6	0.78
PF12762	DDE_Tnp_IS1595	0.78
PF13751	DDE_Tnp_1_6	0.78
PF05987	DUF898	0.78
PF02803	Thiolase_C	0.78
PF09656	PGPGW	0.78
PF09335	SNARE_assoc	0.78
PF08545	ACP_syn_III	0.78
PF06421	LepA_C	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	7.03
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.78
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.78
COG0481	Translation elongation factor EF-4, membrane-bound GTPase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.78
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.78
COG4269	Uncharacterized membrane protein YjgN, DUF898 family	Function unknown [S]	0.78
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.78
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.28 %
Unclassified	root	N/A	11.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.50 %
Unclassified	root	N/A	11.72 %
Viruses	superkingdom	All Organisms → Viruses	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.03 %
Unclassified	root	N/A	11.72 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	5.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.03 %
Unclassified	root	N/A	11.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	57.03 %
Unclassified	root	N/A	11.72 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	5.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	42.97 %
Unclassified	root	N/A	11.72 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	5.47 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	6.25 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	5.47 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	4.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	5.47 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	4.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Paraneoptera	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Hemiptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Sternorrhyncha	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Coccoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Coccidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.72 %
Rhodococcus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	5.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.69 %
Rhodococcus sp. SC4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	3.91 %
Rhodococcus wratislaviensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_10094582	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300001383\|JGI20194J14741_1001567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3546	Open in IMG/M
3300001394\|JGI20191J14862_1002684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5074	Open in IMG/M
3300001394\|JGI20191J14862_1035245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300001397\|JGI20177J14857_1037578	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300001402\|JGI20195J14853_1021904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1125	Open in IMG/M
3300001412\|JGI20173J14856_1015465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1328	Open in IMG/M
3300001870\|JGI24129J20441_1051214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	907	Open in IMG/M
3300002071\|JGIcombinedJ21915_10009966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4264	Open in IMG/M
3300002162\|JGI24139J26690_1090147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300002538\|JGI24132J36420_10077061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	961	Open in IMG/M
3300002549\|JGI24130J36418_10004838	All Organisms → cellular organisms → Bacteria	4564	Open in IMG/M
3300002549\|JGI24130J36418_10058347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	979	Open in IMG/M
3300002551\|JGI24135J36437_1029092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	910	Open in IMG/M
3300004152\|Ga0062386_100450761	All Organisms → Viruses → Predicted Viral	1040	Open in IMG/M
3300004152\|Ga0062386_100690520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	837	Open in IMG/M
3300004476\|Ga0068966_1289985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300004778\|Ga0062383_10032719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1942	Open in IMG/M
3300004778\|Ga0062383_10065127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1476	Open in IMG/M
3300004778\|Ga0062383_10685905	Not Available	523	Open in IMG/M
3300004778\|Ga0062383_10726823	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300004779\|Ga0062380_10436838	Not Available	574	Open in IMG/M
3300004782\|Ga0062382_10043391	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300004782\|Ga0062382_10065905	Not Available	1374	Open in IMG/M
3300004782\|Ga0062382_10160388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	958	Open in IMG/M
3300005345\|Ga0070692_11313461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300005440\|Ga0070705_100273394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1198	Open in IMG/M
3300005456\|Ga0070678_100068316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2649	Open in IMG/M
3300005843\|Ga0068860_101655079	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005938\|Ga0066795_10017991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1987	Open in IMG/M
3300005994\|Ga0066789_10030243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2400	Open in IMG/M
3300005994\|Ga0066789_10037244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2151	Open in IMG/M
3300006059\|Ga0075017_100222129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1373	Open in IMG/M
3300006059\|Ga0075017_100638435	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300006642\|Ga0075521_10275049	Not Available	808	Open in IMG/M
3300006642\|Ga0075521_10544850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300006795\|Ga0075520_1218809	Not Available	801	Open in IMG/M
3300006949\|Ga0075528_10045223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1129	Open in IMG/M
3300006950\|Ga0075524_10098856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1245	Open in IMG/M
3300009176\|Ga0105242_10015246	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	5970	Open in IMG/M
3300009553\|Ga0105249_10088192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2897	Open in IMG/M
3300010857\|Ga0126354_1076853	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300010857\|Ga0126354_1161594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2718	Open in IMG/M
3300010861\|Ga0126349_1186998	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010861\|Ga0126349_1223625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300010861\|Ga0126349_1258657	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300011078\|Ga0138565_1016190	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300011089\|Ga0138573_1214203	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300012045\|Ga0136623_10165648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	955	Open in IMG/M
3300012092\|Ga0136621_1003544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus wratislaviensis	6506	Open in IMG/M
3300012183\|Ga0136624_1111271	Not Available	923	Open in IMG/M
3300012185\|Ga0136619_10041638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1778	Open in IMG/M
3300012526\|Ga0136637_1042908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1568	Open in IMG/M
3300012529\|Ga0136630_1039650	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300012668\|Ga0157216_10336799	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300013306\|Ga0163162_11593388	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300014490\|Ga0182010_10153273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1189	Open in IMG/M
3300014502\|Ga0182021_10277287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1970	Open in IMG/M
3300014969\|Ga0157376_10534898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1157	Open in IMG/M
3300015189\|Ga0167667_1000141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24486	Open in IMG/M
3300015191\|Ga0167659_1014444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1917	Open in IMG/M
3300015192\|Ga0167646_1025599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1474	Open in IMG/M
3300015194\|Ga0167666_1007768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3377	Open in IMG/M
3300015208\|Ga0167664_1001454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10992	Open in IMG/M
3300016702\|Ga0181511_1392139	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300016750\|Ga0181505_10816891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1455	Open in IMG/M
3300017787\|Ga0183260_10000164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50179	Open in IMG/M
3300018037\|Ga0187883_10599938	Not Available	571	Open in IMG/M
3300018043\|Ga0187887_10292424	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300018920\|Ga0190273_10130893	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300019269\|Ga0184644_1088356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1505	Open in IMG/M
3300021860\|Ga0213851_1501989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300021861\|Ga0213853_11222937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300022530\|Ga0242658_1079784	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300025457\|Ga0208850_1017953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1281	Open in IMG/M
3300025457\|Ga0208850_1041688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	773	Open in IMG/M
3300025481\|Ga0208079_1056937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300025509\|Ga0208848_1049565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	896	Open in IMG/M
3300025509\|Ga0208848_1089730	Not Available	627	Open in IMG/M
3300025548\|Ga0208716_1054288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	845	Open in IMG/M
3300025579\|Ga0207927_1065088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	898	Open in IMG/M
3300025619\|Ga0207926_1034803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1492	Open in IMG/M
3300025692\|Ga0209744_1098632	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	1007	Open in IMG/M
3300025750\|Ga0209747_1093464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1029	Open in IMG/M
3300025836\|Ga0209748_1029640	Not Available	2373	Open in IMG/M
3300025836\|Ga0209748_1184771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300025846\|Ga0209538_1021588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2906	Open in IMG/M
3300025846\|Ga0209538_1060298	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	1602	Open in IMG/M
3300025846\|Ga0209538_1284207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300025857\|Ga0209014_10260913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300025891\|Ga0209585_10068796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1319	Open in IMG/M
3300025899\|Ga0207642_10097402	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300025934\|Ga0207686_10008516	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	5541	Open in IMG/M
3300025937\|Ga0207669_10168601	Not Available	1556	Open in IMG/M
3300025938\|Ga0207704_11732512	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300025972\|Ga0207668_10070502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2493	Open in IMG/M
3300026089\|Ga0207648_10045539	All Organisms → cellular organisms → Bacteria	3847	Open in IMG/M
3300026121\|Ga0207683_10032107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4560	Open in IMG/M
3300026223\|Ga0209840_1121980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300026291\|Ga0209890_10018976	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	2697	Open in IMG/M
3300026291\|Ga0209890_10036158	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	1869	Open in IMG/M
3300027716\|Ga0209682_10175371	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300027812\|Ga0209656_10388374	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300027831\|Ga0209797_10079216	Not Available	1446	Open in IMG/M
3300027840\|Ga0209683_10183678	Not Available	959	Open in IMG/M
3300027843\|Ga0209798_10281015	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300027843\|Ga0209798_10547676	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300028869\|Ga0302263_10240896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	720	Open in IMG/M
3300029984\|Ga0311332_10589818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300029984\|Ga0311332_10789785	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300029989\|Ga0311365_11517040	Not Available	575	Open in IMG/M
3300029990\|Ga0311336_12095014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	502	Open in IMG/M
3300030000\|Ga0311337_11069920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300030019\|Ga0311348_11091580	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300030114\|Ga0311333_10734505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300030491\|Ga0302211_10020747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1855	Open in IMG/M
3300030943\|Ga0311366_11430752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300031521\|Ga0311364_11823815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300031521\|Ga0311364_11979667	Not Available	572	Open in IMG/M
3300031671\|Ga0307372_10296004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300031722\|Ga0311351_11346150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. SC4	549	Open in IMG/M
3300031918\|Ga0311367_10652533	Not Available	1072	Open in IMG/M
3300032160\|Ga0311301_10431869	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300034158\|Ga0370507_0215548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300034652\|Ga0316598_015395	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	1899	Open in IMG/M
3300034652\|Ga0316598_202710	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300034653\|Ga0316599_193070	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300034681\|Ga0370546_092897	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.84%
Host-Associated	Host-Associated	10.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.84%
Aquatic	Environmental → Aquatic	25.00%
Plants	Host-Associated → Plants	10.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.91%
Freshwater	Environmental → Aquatic → Freshwater	23.44%
Peat	Environmental → Terrestrial → Peat	10.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.69%
Sediment	Environmental → Aquatic → Sediment	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.38%
Ice	Environmental → Aquatic → Freshwater → Ice	5.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.12%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Loam	Environmental → Terrestrial → Soil → Loam	1.56%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Clay	Environmental → Terrestrial → Soil → Clay	0.78%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	27.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.28%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.16%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.47%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	5.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	27.34%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	10.94%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	10.16%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	5.47%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.12%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.12%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	3.12%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.34%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.56%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001383	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012	Environmental	Open in IMG/M
3300001394	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012	Environmental	Open in IMG/M
3300001397	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012	Environmental	Open in IMG/M
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300001412	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300001870	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211	Environmental	Open in IMG/M
3300002071	Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002162	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-21A	Environmental	Open in IMG/M
3300002538	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300002551	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011078	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012183	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ469 (22.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012526	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ857 (21.06)	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental	Open in IMG/M
3300015191	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-10 : a,b,c samples pooled, hydrological sediment from glacier outflow)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015194	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1c, glacier snout)	Environmental	Open in IMG/M
3300015208	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Samples st-15,16,16 pooled, 1st-3rd transect points, snow/rock/ice interface)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030491	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_3	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034158	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_18	Environmental	Open in IMG/M
3300034652	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_02R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034653	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_03R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_100945823	3300000891	Soil	MATATTNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVATDLLNAQRTYALQLANIFATAKSV*
JGI20194J14741_10015672	3300001383	Arctic Peat Soil	VATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGINAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLIPAKSN*
JGI20191J14862_10026842	3300001394	Arctic Peat Soil	VATPNTQTTSETVTEIPALAQKSREQLISTVQQGQQLGINAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA*
JGI20191J14862_10352451	3300001394	Arctic Peat Soil	ATPTIKTASEAVTEAVSEIPAIAQKSREQLVSNLQQGRQLSIDAAQSWVKAVSVLPSLDMPKIPGLPAMPDLEAATTYTFDVAADLLNAQREFAIQLTHALVPAKTA*
JGI20177J14857_10375781	3300001397	Arctic Peat Soil	VVTPNTKTTSENVTEMPALAQKFHEQLISTVKQSQQLSLXAAQTWVKAVSVLPAFDMPTIPGIPSQPGVEAATKYTFDVAADLLNAQ
JGI20195J14853_10219042	3300001402	Arctic Peat Soil	VATPNTQTTSETVTEIPALAQKSREQLISTVQQGQQLGIDAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA*
JGI20173J14856_10154653	3300001412	Arctic Peat Soil	VATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGIXAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA*
JGI24129J20441_10512142	3300001870	Arctic Peat Soil	VPIVCLTYQAHDRYVSRVAATPCTFQASKEFTAATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGIDAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA*
JGIcombinedJ21915_100099665	3300002071	Arctic Peat Soil	VATPSAKTTNEMPALAQKFREQLLSTVQQGQQMSIDAAQTWVKAVSVLPAVDLPKIPGIPDLPNLEAATKYTFDVAADLLNAQREYAVQLTNTLVPAKTA*
JGI24139J26690_10901472	3300002162	Arctic Peat Soil	PTKTLREFTVATPTIKTASEAVTEAVSEIPAIAQKSREQLVSNLQQGRQLSIDAAQSWVKAVSVLPSLDMPKIPGLPAMPDLEAATTYTFDVAADLLNAQREFAIQLTHALVPAKTA*
JGI24132J36420_100770611	3300002538	Arctic Peat Soil	VATRSAKTTNEMPALAQKFREQLLSTVQQGQQMSIDAAQTWVKAVSVLPAMDLPKIPGIPAVPNLEAATKYTFDVAADLLSAQREFAVQLTNALVPAKTA*
JGI24130J36418_100048384	3300002549	Arctic Peat Soil	VATPTIKTASEAVTEAVSEIPAIAQKSREQLVSNLQQGRQLSIDAAQSWVKAVSVLPSLDMPKIPGLPAMPDLEAATTYTFDVAADLLNAQREFAIQLTHALVPAKTA*
JGI24130J36418_100583472	3300002549	Arctic Peat Soil	VATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGIDAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA*
JGI24135J36437_10290922	3300002551	Arctic Peat Soil	DAVHLPNLPKEFTVATPSAKTTNEMPALAQKFREQLLSTVQQGQQMSIDAAQTWVKAVSVLPAVDLPKIPGIPDLPNLEAATKYTFDVAADLLNAQREYAVQLTNTLVPAKTA*
Ga0062386_1004507611	3300004152	Bog Forest Soil	MATDTATTKTTSTKEVPELAQKMREQLIATVQQSQQLSVDAAETWVKAVSVLPIPDLPAVPGLPSMPGFEAATRYTFDIAADLLSAQRDFTLQLVKVLVPEKSA*
Ga0062386_1006905202	3300004152	Bog Forest Soil	MATETTTTKTASTKEVPEFAQKIREQMISTVQQSQQLSVDAAETWVKAVSVLPIPDLPAMPGVPSMPGVEAATRYTFDFAADLLNAQRDFTLQLVKVLVPEKSA*
Ga0068966_12899852	3300004476	Peatlands Soil	MATDTATTKTTSTKEVPELAQKIREQLIATVQQSQQLSVDAAETWVKAVSVLPIPDVPAVPGLPSMPGLEAATRYTFDIATDLLNAQRDFTLQLVKVLVPEKSA*
Ga0062383_100327192	3300004778	Wetland Sediment	VVTPNAKTASEMPALAQKFREQLVSAVQQWQQLSIDAAQTWVKAVSVLPAMDLPKIPGMPNMPNMEAATMYTFDVAADLLNAQRAFALQLTSALVPSKSS*
Ga0062383_100651272	3300004778	Wetland Sediment	VATPNAKIEMDIPALAQKSREQLVANLQQGHQLAVDAAQSWVKAVSVLPAADLPKIPGMPAIPNLEAATKYTFDVAADLLNAQRAFAVQLTNTLVPAKTV*
Ga0062383_106859051	3300004778	Wetland Sediment	MATATTKTTTTSEMPDLAEKIREQMLSTLRQGQQLSVDAAQSWVKAVSVLPAVALPAIPGIPALPGVEAATKFTFDVAADVLSAHRDFALKLANVLVTEKPA*
Ga0062383_107268231	3300004778	Wetland Sediment	TEMPALAQKMREQLISTLQQSQQLSIDAAQTWVKAVSVLPAMDLPKMPGLPAMPGLETATLFAFDVAADLLNAQREYALQLTHALSPEKTS*
Ga0062380_104368382	3300004779	Wetland Sediment	VSATPHTLKTLKELTVVTANTKTPTASPTEMPALAQKMREQLISTLQQSQQLSIDAAQTWVKAVSVLPAMDLPKMPGLPAMPGLETATLFAFDVAADLLN
Ga0062382_100433913	3300004782	Wetland Sediment	MPALAQKFREQLVSAVQQGQQLSIDAAQTWVKAVSVLPTMDPPKIPGMPNMPNMEAATMYTFDVAADLLNAQRAFALQLTSALVPSKSS*
Ga0062382_100659052	3300004782	Wetland Sediment	VHLPTYKELTVATPNAKIEMDIPALAQKSREQLVANLQQGHQLAVDAAQSWVKAVSVLPAADLPKIPGMPAIPNLEAATKYTFDVAADLLNAQRAFAVQLTNTLVPAKTV*
Ga0062382_101603882	3300004782	Wetland Sediment	VSATPHTLKTLKELTVVTANTKTPTASPTEMPALAQKMREQLISTLQQSQQLSIDAAQTWVKAVSVLPAMDLPKMPGLPAMPGLETATLFAFDVAADLLNAQREYALQLTHALSPEKTS*
Ga0070692_113134611	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MATATTDKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVAADLLNAQRAYALQLANILATAKSV*
Ga0070705_1002733942	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MATATNNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVAADLLNAQRAYALQLANILATAKSV*
Ga0070678_1000683163	3300005456	Miscanthus Rhizosphere	MATATNNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDMPNIPGTSTFPGLEASTTFAFDVAADLLNAQRAYALQLANILATAKSV*
Ga0068860_1016550792	3300005843	Switchgrass Rhizosphere	MATATTNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVATDLLNAQRAYALQLANILATAKSV*
Ga0066795_100179913	3300005938	Soil	ETISETVTEIPALAQKSREQLISTVQQGQQLGINAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA*
Ga0066789_100302433	3300005994	Soil	VVTPNTKTTNETDLNNIAQKVREQLLSTVQQGQKMSIDAAQTWVKAVSVLPVPDLPKIPGIPALPGLEAATTYTFDVAADLLNAQRVFALQLTNVLVPAAKN*
Ga0066789_100372442	3300005994	Soil	VVTPNTKTTNETDLTNVAQKLREQFLSTVQQGQKISIDAAQTWVKAVSVLPVPDLPKIPGIPALPGLEAATTYTFDVAADLLNAQRVFALQLTNILVPAAKN*
Ga0075017_1002221292	3300006059	Watersheds	MATTTTHTPAAEMPELAQKIREQLVSTVQQGQQLSIDAAQTWVKAVSVLPVPDLPKVPGIPALPGVEAATKYTFDLAADLLKAQREYALQLAGVLVPEKSA*
Ga0075017_1006384352	3300006059	Watersheds	MATDTATAKTTSTKEVPELAQKIREQLIATVQQSQQLSIDAAETWVKAVSVLPIPDLPAMPGVPSMPGIEAATRYTFDLATDLLNAQRDFTLQLVKVLVPEKTA*
Ga0075521_102750491	3300006642	Arctic Peat Soil	TKPATVTATKPATEIPAFTQKPREQLVSSLQQGQQLGIDAAQTWINAVSALPVMDLPKIAGFPDIPAMQTATKFTFDVAADLLSAQREFAVQLTKVPLPAKLG*
Ga0075521_105448502	3300006642	Arctic Peat Soil	VATPNTQTTSETVTEIPAIAQKSREQLISTVQQGQQLGINAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDF
Ga0075520_12188091	3300006795	Arctic Peat Soil	TKPATEIPAFTQKSREQLVSSLQQGQQLGIDAAQTWINAVSALPVMDLPKIAGFPDIPAMQTATKFTFDVAADLLSAQREFAVQLTKVPLPAKLG*
Ga0075528_100452231	3300006949	Arctic Peat Soil	DRYVSRVAATPCTFQASKEFTVATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGIDAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA*
Ga0075524_100988563	3300006950	Arctic Peat Soil	VATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGIDAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLIPAKSN*
Ga0105242_100152463	3300009176	Miscanthus Rhizosphere	MATATNNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVATDLLNAQRAYALQLANILATAKSV*
Ga0105249_100881922	3300009553	Switchgrass Rhizosphere	MATATNNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPKIPGTSTFPGLEASTTFAFDVATDLLNAQRTYALQLANIFATAKSR*
Ga0126354_10768532	3300010857	Boreal Forest Soil	RAPESFEEFTMATTTKSTPTTEMPDLALKFREQLVSTVAQGQQFSLDAAHAWVKAVSVIPVPDLPAVPGLPNVPSVEAATKYTFGVASDLLNAQRDFTLQLANVLLPVKSV*
Ga0126354_11615941	3300010857	Boreal Forest Soil	RSLFRRHQGSFTVVTPNTKAASDTADQDANELPAFAKYFREQLVSTVQQSQQLSVDAAQTWVKAVSVLPVNRLTDLKIPGIRSLPNMQAATKYTFDMAADLLNAQREYALQLATALVPAKKS*
Ga0126349_11869981	3300010861	Boreal Forest Soil	MAATSTKTTTATDLPDFALKMREQLLATVQQSQQMSLDAAKTWVKAVSVLPVQDLPKVPGIPSVPVESATKFTFDIAADLLDAQRDFVLKLTDVFASSTSA*
Ga0126349_12236252	3300010861	Boreal Forest Soil	GDEHLPRLSKEFTVVTPNTKTTNETDLNTIAQKVREQLLSTVQQGQKMSIDAAQTWVKAVSVLPVPDLPKIPGIPALPGLEAATTYTFDVAADLLNAQRVFALQLTNVLVPAAKN*
Ga0126349_12586571	3300010861	Boreal Forest Soil	HRAPGSLKEFTMATATTKTTPTTEMPDLALKLREQLVSTVAQGQQFSLDAAHAWVKAVSVIPVPDLPAVPGLPNVPSVEAATKYTFGVASDLLNAQRDFTLQLANVLLPVKSV*
Ga0138565_10161901	3300011078	Peatlands Soil	NLKEPTMATDTATAKTTSTKEVPELAQKIREQLIATVQQSQQLSIDAAETWVKAVSVLPIPDLPAMPGVLSMPGIEAATRYTFDLATDLLNAQRDFTLQLVKVLVPEKTA*
Ga0138573_12142032	3300011089	Peatlands Soil	LRVADRNLKEPTMATDTATAKTTSTKEVPELAQKIREQLIATVQQSQQLSIDAAETWVKAVSVLPIPDLPAMPGVPSMPGIEAATRYTFDLATDLLNAQRDFTLQLVKVLVPEKTA*
Ga0136623_101656481	3300012045	Polar Desert Sand	MTTNAKTTPKSEMPDLAQKVREQVISTVQQGQQLSIDAAQTWVKAVSVLPTPDLPTVPGIPAVPSVEAATKYTFDLAADLLNAQREYALQLTHVLG
Ga0136621_10035442	3300012092	Polar Desert Sand	MTTNAKTTPKSEMPDLAQNVREQVISTVQQGQQLSIDAAQTWVKAVSVLPTPDLPTVPGIPAVPSVEAATKYTFDLAADLLNAQREYALQLTHVLGADKSA*
Ga0136624_11112711	3300012183	Polar Desert Sand	MSTNAKTTPKSEMPDLAQTVREHVISTVQQGQQLSIDAAQTWVKAVSVLPTPDLPTVPGIPAVPSVEAATKYTFGLAADLLNAQREYALQLTHVLGSDKSA*
Ga0136619_100416383	3300012185	Polar Desert Sand	MTTNAKTTPKSEMPDLAQKVREQVISTVQQGQQLSIDAAQTWVKAVSVLPTPDLPTVPGIPAVPSVETATKYTFDLAADLLNAQREYALQLTHVLGSDKSA*
Ga0136637_10429082	3300012526	Polar Desert Sand	MSTNAKTTPKSEMPDLAQKVREQVISTVQQGQQLSIDAAQTWVKAVSVLPTPDLPTVPGIPAVPSVETATKYTFDLAADLLNAQREYALQLTHVLGSDKSA*
Ga0136630_10396503	3300012529	Polar Desert Sand	MSTNAKTTPKSEMPDLAQKVREQVISTVQQGQQLSIDAAQTWVKAVSVLPTPDLPTVPGIPAVPSVEAATKYTFDLAADLLNAQREYALQLTHVLGSDKSA*
Ga0157216_103367992	3300012668	Glacier Forefield Soil	MATATTNNKPTTETPQIAQKIREQLLSTVTQGHKLSVDAAQTWVKAVSVLPVPDLPKIPGIPAVPGVETATIFAFDLAADLLKAQREYALQLVNVFAPAKSA*
Ga0163162_115933881	3300013306	Switchgrass Rhizosphere	KIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPKIPGTSTFPGLEASTTFAFDVATDLLNAQRTYALQLANIFATAKSR*
Ga0182010_101532731	3300014490	Fen	IAQKFREQLVSNLQQGQKFSVDAAKEWAKAVSVLAIPDLPKIPGLPDAPNLETTTKYTFDVAADLLKAQREFVLNLTNVVAPAKTL*
Ga0182021_102772873	3300014502	Fen	MATATKTTTEIPDIAQKVREQLLSAVQQGQKLTIDAAQGWAKAVSVLPTPDLPTIPGVPTVPSVEAATTFTFDLAADLLNAQRDFVLQLTNALVPAKTA*
Ga0157376_105348982	3300014969	Miscanthus Rhizosphere	MATATTDKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPKIPGTSTFPGLEASTTFAFDVAADLLNAQRAYALQLANILATAKSV*
Ga0167667_10001418	3300015189	Glacier Forefield Soil	VPATPRTLKTLKEFTVVSANAKTPTASPTEMPALAQMMREQLISTLQQGQQLSIDAAQTWVKAVSVLPAMNLPKMPGLPAMPGVETATLFAFDVAADLLNAQREYALQLTHALSPETTS*
Ga0167659_10144441	3300015191	Glacier Forefield Soil	MAPANTKTPTASPTEMPALAQMMREQLISTLQQGQQLSIDAAQTWVKAVSVLPAMDLPKLPGLPAMPAVETATLFAFDVAADLLNAQREYALQLTHALSPEKTS*
Ga0167646_10255993	3300015192	Glacier Forefield Soil	MATPTSKATTEPTTEVPALAQKSREQLLSTLQQGQQLSIDAAQTWGKVVSKLPTVDLPKVPGLPTLPSLEAATKYTFDVATDLLKAQRDYALQLSSTLGAAKSA*
Ga0167666_10077683	3300015194	Glacier Forefield Soil	VPASGTLETLKELTMAPANTKTPTASPTEMPALAQMMREQLISTLQQGQQLSIDAAQTWVKAVSVLPAMNLPKMPGLPAMPAVETATLFAFDVAADLLNAQREYALQLTHALSPETTS*
Ga0167664_10014545	3300015208	Glacier Forefield Soil	VPASGTLETLKEFTVAPANTKTPPASPTEMPALAQKMREQLISTLQQGQQLSIDAAQTWVKAVSVLPAMDLPTMPGLPAMPGLETTTLFAFDVAADLLNAQREYALQLAHALSPEKTS*
Ga0181511_13921391	3300016702	Peatland	GSQNENLKEPTMATDTATAKTTTTKEVPELAQKIREQLIATVQQSQQLSIDAAETWVKAVSVLPMPDLPAMPGVPSMPGIEAATRYTFDLATDLLNAQRDFTLQLVKVLAPEKTA
Ga0181505_108168913	3300016750	Peatland	MATDTATAKTTTTKEVPELAQKIREQLIATVQQSQQLSIDAAETWVKAVSVLPMPDLPAMPGVPSMPGIEAATRYTFDLATDLLNAQRDFTLQLVKVLAPEKTA
Ga0183260_100001646	3300017787	Polar Desert Sand	MTTNAKTTPKSEMPDLAQNVREQVISTVQQGQQLSIDAAQTWVKAVSVLPTPDLPTVPGIPAVPSVEAATKYTFDLAADLLNAQREYALQLTHVLGADKSA
Ga0187883_105999381	3300018037	Peatland	MATVTTNTTPTTEMPGLAEKFREQLVSAVQQGQKMSVDAIQTWVKAVSVLPVPDLPAIPGISAIPGMEAATKFTFDVAADLLNSQRDYALQLAKVLVAAKSA
Ga0187887_102924242	3300018043	Peatland	MVTATTKTTPTTEMPDFAEKIREQLVSTVQQGQKMSVDAIQTWVKAVSVLPVPDLPAIPGISAIPGMEAATKFTFDVAADLLNSQRDYALQLAKVLVAAKSA
Ga0190273_101308932	3300018920	Soil	MATAASNKTTTQLPDIAEKIREQLLSTVKQGQQLSVDAAQSWVKVVSVLPTPHLPKVPGIPAFPGLEASTTFAFDVATDLLNAQRAYTLQLADIFAPAKSA
Ga0184644_10883561	3300019269	Groundwater Sediment	KSSTTDVPELAQKIREQLVSTVQQGQQLSLNAAQAWVKAVSVIPVPDLPTVPGVPTAPSVEVATAYTFDVVTDLLNAQRTFALQLADVLVPVKSV
Ga0213851_15019892	3300021860	Watersheds	MATTTTRTPAAEMPELAQKIREQLLSTVQQGQQLSIDAAQTWVKAVSVLPVPDLPKVPGIPALPGVEAATKYTFDLAADLLKVQREYALQMAGVLAPEKSA
Ga0213853_112229371	3300021861	Watersheds	MATTTTHTPAAEMPELAQKIREQLVSTVQQGQQLSIDAAQTWVKAVSVLPVPDLPKVPGLPALPGVEAATKYTFDLAADLLKAQREYALQLAGVLVPEKSA
Ga0242658_10797841	3300022530	Soil	MATATTKTTPTTEMPDLALKIREQLVSTVAQVQQLSLDAAQAWVKAVSVIPVPELPAVPGLANVPSVEAATKYTFDVATDLLNAQRDFTLQLANVLLPVKSA
Ga0208850_10179532	3300025457	Arctic Peat Soil	VATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGINAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLIPAKSN
Ga0208850_10416881	3300025457	Arctic Peat Soil	VATPTIKTASEAVTEAVSEIPAIAQKSREQLVSNLQQGRQLSIDAAQSWVKAVSVLPSLDMPKIPGLPAMPDLEAATTYTFDVAADLLNAQREFAIQLTHALVPAKTA
Ga0208079_10569372	3300025481	Arctic Peat Soil	SETVTEIPALAQKSREQLISTVQQGQQLGIDAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA
Ga0208848_10495651	3300025509	Arctic Peat Soil	PGVAVHLPKTLKEFTVVTPNTKTTNETDLNNIAQKVREQLLSTVQQGQKMSIDAAQTWVKAVSVLPVPDLPKIPGIPALPGLEAATTYTFDVAADLLNAQRVFALQLTNVLVPAAKN
Ga0208848_10897301	3300025509	Arctic Peat Soil	VATPNTKPATESVTESVIVAEIPALAQKSREQLVSNLQQGQQLSIDAAQSWVKAISALPIMDLPKVPGFPGVPDLQTATNYTFDVASDLLNAQRDFVSQLTNVLVPAKTA
Ga0208716_10542882	3300025548	Arctic Peat Soil	VATPSAKTTTEMPALAQKFREQLLSTVQQGQQMSIDAAQTWVKAVSVVPAVDLPKIPGIPDLPNLEAATKYTFDVAADLLNAQREFAVQLTNTLVPAKTA
Ga0207927_10650881	3300025579	Arctic Peat Soil	VATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGIDAAQTWAEAVSVLPVMDLPTIPGFPDMPGAEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA
Ga0207926_10348033	3300025619	Arctic Peat Soil	VATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGIDAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA
Ga0209744_10986322	3300025692	Arctic Peat Soil	VATPSAKTTNEMPALAQKFREQLLSTVQQGQQMSIDAAQTWVKAVSVLPAVDLPKIPGIPDLPNLEAATKYTFDVAADLLNAQREYAVQLTNTLVPAKTA
Ga0209747_10934641	3300025750	Arctic Peat Soil	VATPSAKTTNEMPALAQKFREQLLSTVQQGQQMSIDAAQTWVKAVSVLPAVDLPKIPGIPDLPNLEAATKYTFDVAADLLNAQREFAVQLTNTLVPAKTA
Ga0209748_10296401	3300025836	Arctic Peat Soil	VAAPSTKPLAVTATKPVTKPATVTATKPATEIPAFTQKPREQLVSSLQQGQQLGIDAAQTWINAVSALPVMDLPKIAGFPDIPAMQTATKFTFDVAADLLSAQREFAVQLTKVPLPAKLG
Ga0209748_11847712	3300025836	Arctic Peat Soil	MNVPIVCLTYQAHDRYVSRVAATPCTFQASKEFTAATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGIDAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA
Ga0209538_10215885	3300025846	Arctic Peat Soil	VATPSTTKPASQPVTGPVSVTEIPVLAQKSREQLVSNLQQGQQMSIDAAQTWVKAVSDLPVMDLPTIPGLPVLPDLQAATTYAFDVASDLLNAQRAFAVELTNLLVPAKTA
Ga0209538_10602982	3300025846	Arctic Peat Soil	VATRSAKTTNEMPALAQKFREQLLSTVQQGQQMSIDAAQTWVKAVSVLPAMDLPKIPGIPAVPNLEAATKYTFDVAADLLSAQREFAVQLTNALVPAKTA
Ga0209538_12842071	3300025846	Arctic Peat Soil	VATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGINAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLVPAKTA
Ga0209014_102609131	3300025857	Arctic Peat Soil	VATSTIKTAGEAVTEAVTEAVSEIPAIAQKSREQLVSNLQQGRQLSIDAAQSWVKAVSVLPSLDMPKIPGLPAMPDLEAATTYTFDVAADLLNAQR
Ga0209585_100687962	3300025891	Arctic Peat Soil	VATPNTQTTSETISETVTEIPALAQKSREQLISTVQQGQQLGIDAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLIPAKSN
Ga0207642_100974022	3300025899	Miscanthus Rhizosphere	MATATNNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVATDLLNAQRAYALQLANILATAKSV
Ga0207686_100085165	3300025934	Miscanthus Rhizosphere	MATATNNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVAADLLNAQRAYALQLANILATAKSV
Ga0207669_101686012	3300025937	Miscanthus Rhizosphere	MATATNNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVATDLLNAQRAYALQLANIL
Ga0207704_117325122	3300025938	Miscanthus Rhizosphere	KIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVAADLLNAQRAYALQLANILATAKSV
Ga0207668_100705023	3300025972	Switchgrass Rhizosphere	MATATTDKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVAADLLNAQRAYALQLANILATAKSV
Ga0207648_100455395	3300026089	Miscanthus Rhizosphere	MATATNNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDLPNIPGTSTFPGLEASTTFAFDVAADLLNAQRAYALQLANILATAK
Ga0207683_100321074	3300026121	Miscanthus Rhizosphere	MATATNNKATTGIPEIAQKIREQLLSTVQQGQKLSVDATQTWVKAVSVLPVPDMPNIPGTSTFPGLEASTTFAFDVAADLLNAQRAYALQLANILATAKSV
Ga0209840_11219801	3300026223	Soil	VAATPRTFQDFEELTVATPTTKTASESVTDIPALAQKSREQLISTVQQGQQLGINAAQTWAEAVSVLPVMDLPTIPGFPDMPGVEAATKYTFDLAADLLNAQRDFVLQLTNVLIPAKSN
Ga0209890_100189763	3300026291	Soil	VVTPNTKTTNETDLTNVAQKLREQFLSTVQQGQKISIDAAQTWVKAVSVLPVPDLPKIPGIPALPGLEAATTYTFDVAADLLNAQRVFALQLTNILVPAAKN
Ga0209890_100361582	3300026291	Soil	VVTPNTKTTNETDLNNIAQKVREQLLSTVQQGQKMSIDAAQTWVKAVSVLPVPDLPKIPGIPALPGLEAATTYTFDVAADLLNAQRVFALQLTNVLVPAAKN
Ga0209682_101753711	3300027716	Wetland Sediment	VVTANAKTTSATPNEMPDLAQKLREQMMSTLQQGQKMSIDAAQTWVKAVSVLPAMDLPKIPGMPAMPGIEAATTFTFDVAADLL
Ga0209656_103883741	3300027812	Bog Forest Soil	PELAQKMREQLIATVQQSQQLSVDAAETWVKAVSVLPIPDLPAVPGLPSMPGFEAATRYTFDIAADLLSAQRDFTLQLVKVLVPEKSA
Ga0209797_100792162	3300027831	Wetland Sediment	VVTANTKTPTASPTEMPALAQKMREQLISTLQQSQQLSIDAAQTWVKAVSVLPAMDLPKMPGLPAMPGLETATLFAFDVAADLLNAQREYALQLTHALSPEKTS
Ga0209683_101836782	3300027840	Wetland Sediment	VHLPTYKELTVATPNAKIEMDIPALAQKSREQLVANLQQGHQLAVDAAQSWVKAVSVLPAADLPKIPGMPAIPNLEAATKYTFDVAADLLNAQRAFAVQLTNTLVPAKTV
Ga0209798_102810151	3300027843	Wetland Sediment	MATATTKTTTTSEMPDLAEKIREQMLSTLRQGQQLSVDAAQSWVKAVSVLPAVALPAIPGIPALPGVEAATKFTFDVAADVLSAHRDFALKLANVLVTEKPA
Ga0209798_105476762	3300027843	Wetland Sediment	ALAQKMREQLISTLQQSQQLSIDAAQTWVKAVSVLPAMDLPKMPGLPAMPGLETATLFAFDVAADLLNAQREYALQLTHALSPEKTS
Ga0302263_102408962	3300028869	Fen	TSENAAEIPALAQKFREQLVSTVQQGQQLSIDAAQTWVKAVSVLPAFDLPKIPGIPALPGVEAATKYTFDVAADLLNAQREYALQLTNALVPAKTS
Ga0311332_105898181	3300029984	Fen	MATTSAKAANETVTEPVSETVSETDMPALAQKTREQLVSGLQQGQQLSIDAAQSWVKAVSVLPAMDLPKIPGLPDLPDLAAATKYTFDVASDLLSAQRNFALQLTSTLSPAKAV
Ga0311332_107897852	3300029984	Fen	MATTTKSTPTTEMPDLALKLREQLVSTVAQGQQFSLDAAHAWVKAVSVIPVPDLPAVPGLPNVPSVEAATKYTFGVASDLLNAQRDFTLQLANVLLPVKSV
Ga0311365_115170401	3300029989	Fen	MATATAKPESETVNEPASETEIPELVQKSRDQLVSGLQQGQQLSIDAAQKWAKAVSVLPSVDLPKIPGMPALPDLETATRYTFDLAADLLSSQRNFALQLTNALRPAKTV
Ga0311336_120950142	3300029990	Fen	KSLKEFTVVTPNSKTTSENAAEIPALAQKFREQLVSTVQQGQQLSIDAAQTWVKAVSVLPAFDLPKIPGIPALPGVEAATKYTFDVAADLLNAQREYALQLTNALVPAKTS
Ga0311337_110699202	3300030000	Fen	VVTPNSKTTSENAAEIPALAQKFREQLVSTVQQGQQLSIDAAQTWVKAVSVLPAFDLPKIPGIPALPGVEAATKYTFDVAADLLNAQREYALQLTNALVPAKTS
Ga0311348_110915801	3300030019	Fen	VVTANTKTPTTSPTEMPALAQKMREQLIATLQQGQQLSIDAAQTWVKAVSVLPAMDLPKMPGLPAMPDLETATLFAFDVAADLLNAPRAYALQLTHALSPEKTS
Ga0311333_107345052	3300030114	Fen	VVTANTKTPTTSPTEMPALAQKMREQLIATLQQGQQLSIDAAQTWVKAVSVLPAMDLPKMPGLPAMPDLETATLFAFDVAADLLNAQRAYALQLTHALSPEKTS
Ga0302211_100207473	3300030491	Fen	VVTPSTKTTPESATEIPAIVQKLREQLMSAVQQSQQMAIDAAQTWAKALSVLPAMDLPTIPGLPALPSIEAATKYTFDMAADI
Ga0311366_114307521	3300030943	Fen	VVTPNSKTTSENAAEIPALAQKFREQLVSTVQQGQQLSIDAAQTWVKAVSVLPAFDLPKIPGIPALPGVEAATKYTFDVAADLLNA
Ga0311364_118238152	3300031521	Fen	AEIPALAQKFREQLVSTVQQGQQLSIDAAQTWVKAVSVLPAFDLPKIPGIPALPGVEAATKYTFDVAADLLNAQREYALQLTNALVPAKTS
Ga0311364_119796671	3300031521	Fen	MATTSAKAANETDTEPVSETVSETDMPALAQKTREQLVSGLQQGQQLSIDAAQSWVKAVSVLPAMDLPKIPGLPDMPDLAAATKYTFDVASDLLSAQRNFALQLTSTLSPAKAV
Ga0307372_102960042	3300031671	Soil	MATTTTKTTTEVPEFAQKLREQLISTVQQSQQMSLEAAQTFVKAVSVLPIPDLPAMPGAPAMPGIEVATKYSFDVAADLLNSQRDFVLQLAKVFSEKSA
Ga0311351_113461501	3300031722	Fen	MATTSAKAATETVTEPVSETDMPALAQKTREQLVSGLQQGQQLSIDAAQSWVKAVSVLPAMDLPKIPGLPDMPDLAAATKYTFDVASDLLSAQRNFALQLTNTLSPATAV
Ga0311367_106525332	3300031918	Fen	ATETVTEPVSETVSETDMPALAQKTREQLVSGLQQGQQLSIDAAQSWVKAVSVLPAMDLPKIPGLPDLPDLAAATKYTFDVASDLLSAQRNFALQLTSTLSPAKAV
Ga0311301_104318693	3300032160	Peatlands Soil	MATDTATAKTTSTKEVPELAQKIREQLIATVQQSQQLSIDAAETWVKAVSVLPIPDLPAMPGVPSMPGIEAATRYTFDLATDLLNAQRDFTLQLVKVLVPEKTA
Ga0370507_0215548_282_626	3300034158	Untreated Peat Soil	MFLLCRRRRAPSKPLKEFTVATPSTKTANESGMPALAQKFHEQLLSTVKQSQQLSLDAAQAWTKAVSVLPVPDLPKIPGIPAMPGMEAATRYTFDVASDLLNAQRDFTLQLESAL
Ga0316598_015395_69_338	3300034652	Untreated Peat Soil	MPALAQKMREHLISTLQQGQQLSIDATETWVKAVSVLPAMDLPKVPGVPAMPGLETATLFVFDVAADLLNAQREYALQLTHALSPVKAS
Ga0316598_202710_76_345	3300034652	Untreated Peat Soil	MPALAQKMREQLISTLQQGQQLSIDAAETWVKAVSVLPAMDLPKMPGVPAMPGLETATLFVFDVAADLLNAQREYALQLTHALAPVKAS
Ga0316599_193070_207_542	3300034653	Untreated Peat Soil	KTLKEFTVVTANTKTQPTSPTEMPALAQKMREQLIATLQQGQQLSIDAAETWVKAVSVLPAMDLPKMPGLPAMPDLETATLFAFDVAADLLNAQRTYALQLTHALSPEKTS
Ga0370546_092897_33_338	3300034681	Soil	MASTTTKSSTTEVPELAQKIREQLVSTVQQGQQLSLNAAQAWVKAVSVIPVPDLPTVPGVPTAPSVEAATTYTFDLVTDLLNAQRSFALQLTDLLVPVKSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065250

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences