NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F065166

Metagenome Family F065166

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F065166
Family Type Metagenome
Number of Sequences 128
Average Sequence Length 93 residues
Representative Sequence MEIATYPEKFSDDITIEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNTLEAGIYQLSVKNTNSNILYSSILTKF
Number of Associated Samples 91
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.87 %
% of genes near scaffold ends (potentially truncated) 24.22 %
% of genes from short scaffolds (< 2000 bps) 73.44 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.312 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.844 % of family members)
Environment Ontology (ENVO) Unclassified
(26.562 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.781 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.
1A2_c1_00613390
2INPgaii200_06894341
3WSSedB1CaDRAFT_100032072
4INPhiseqgaiiFebDRAFT_10181122424
5F14TC_1083417052
6JGIcombinedJ13530_1005083753
7JGIcombinedJ13530_1009236071
8JGIcombinedJ13530_1035820502
9JGI12635J15846_107112641
10JGI20214J51088_102407033
11Ga0066823_101109241
12Ga0070658_108018392
13Ga0070680_10000025427
14Ga0070659_1005485933
15Ga0070659_1009341341
16Ga0070731_105055671
17Ga0070733_100033343
18Ga0070763_106076191
19Ga0066788_100002203
20Ga0066787_100003066
21Ga0066787_100450053
22Ga0080027_1000004131
23Ga0080027_1000076015
24Ga0080027_100010978
25Ga0080027_100354732
26Ga0080027_102483832
27Ga0066789_100076203
28Ga0075028_1000450331
29Ga0075029_1002013503
30Ga0075026_1000792421
31Ga0075017_1000031545
32Ga0075017_1003584732
33Ga0075017_1014781573
34Ga0075019_100315433
35Ga0075019_110052982
36Ga0075015_1006252961
37Ga0070715_104529831
38Ga0070715_109238092
39Ga0075014_1001382381
40Ga0097621_1003819302
41Ga0075021_104065102
42Ga0075522_100249464
43Ga0075521_100027923
44Ga0075521_102352992
45Ga0104322_1281452
46Ga0105240_119422903
47Ga0105241_121281651
48Ga0134128_117438162
49Ga0134128_132008551
50Ga0150983_131077292
51Ga0137404_111350272
52Ga0164241_107616171
53Ga0163162_114791351
54Ga0157375_112199573
55Ga0157375_125679212
56Ga0120132_10059982
57Ga0075356_11604341
58Ga0182024_1000177447
59Ga0157379_103508353
60Ga0157376_100611952
61Ga0157376_100791873
62Ga0157376_106810112
63Ga0157376_119841531
64Ga0157376_121230292
65Ga0184625_103221733
66Ga0193744_10206142
67Ga0193727_10763382
68Ga0193718_10787781
69Ga0193726_10311312
70Ga0193726_11047933
71Ga0193726_12161181
72Ga0193716_11055191
73Ga0193724_10045083
74Ga0210407_108689712
75Ga0210399_100848002
76Ga0210399_113452741
77Ga0210396_100524693
78Ga0210388_108742952
79Ga0193699_104549091
80Ga0210397_100551092
81Ga0210397_101115172
82Ga0210397_102647602
83Ga0210397_108453063
84Ga0210397_109226202
85Ga0210397_115882521
86Ga0210383_108864462
87Ga0210394_100293405
88Ga0210394_103458652
89Ga0210394_115549472
90Ga0210384_1000383414
91Ga0210384_106902392
92Ga0210410_108228881
93Ga0210410_111699491
94Ga0224548_10133893
95Ga0208077_10165943
96Ga0208715_10604991
97Ga0207928_10397021
98Ga0207929_10261362
99Ga0208586_10633031
100Ga0209483_10758112
101Ga0209584_101606871
102Ga0207705_104457623
103Ga0207654_100004835
104Ga0207657_106990843
105Ga0207652_111468391
106Ga0207674_103862973
107Ga0209838_10011963
108Ga0209849_10004968
109Ga0209863_100004893
110Ga0209863_100257263
111Ga0209890_100530863
112Ga0209693_104227831
113Ga0209167_100055635
114Ga0209579_104204232
115Ga0209068_100449993
116Ga0209068_104020982
117Ga0209068_107001202
118Ga0209067_100450683
119Ga0209006_108245651
120Ga0209069_103766601
121Ga0209526_108072272
122Ga0247036_10287392
123Ga0170834_1013141971
124Ga0170834_1064883201
125Ga0170834_1090921301
126Ga0170834_1094155853
127Ga0170822_158592161
128Ga0307473_112395612
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.65%    β-sheet: 46.02%    Coil/Unstructured: 51.33%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080MEIATYPEKFSDDITIEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNTLEAGIYQLSVKNTNSNILYSSILTKFSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.80
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
96.1%3.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Cryconite
Wetland
Groundwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Surface Soil
Permafrost Soil
Arctic Peat Soil
Permafrost
Soil
Soil
Soil
Forest Soil
Hardwood Forest Soil
Natural And Restored Wetlands
Soil
Prmafrost Soil
Permafrost
Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Soil
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
3.9%12.5%7.8%3.1%7.8%14.8%3.9%5.5%5.5%3.1%5.5%3.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2_c1_006133902124908043SoilMFYSDDQSTGKPETRMEIATYSEKFSDDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHLDNVNNLEAGIYQLSVKNTHSNILYSSILTKF
INPgaii200_068943412228664022SoilMYFTEDKLKSKSETYMEISSYPEKFSDDITVEISTDAEDHCIIVLSNQMGRILRMMGVNVNEGKNQIHVDNVDGLEAGIYNLSVKNTNSNILFSSILTKF
WSSedB1CaDRAFT_1000320723300000313WetlandMYYSDDEGTVQSNTCMEIATYPEKFSNAITVEISADADDHCIIVLTNKMGRILRMMGVNVNQGKNQIRVDKVYALEAGIYQLNVKNKNSNILYSSILTKF*
INPhiseqgaiiFebDRAFT_101811224243300000364SoilMYFTEDKLKSKSETYMEISSYPEKFSDDITVEISTDAEDHCIIVLSNQMGRILRMMGVNVNEGKNQIHVDNVDGLEAGIYNLSVKNTNSNILFSSILTKF*
F14TC_10834170523300000559SoilMYFSEDELTGKSDTYMEIASYPENFSDDITVEIRADSEDHCIIVLSNQMGRILRMMGVNVNQGNNQIHVDNLNTLEAGIYQLSVKNTSSNILYSSILTKF*
JGIcombinedJ13530_10050837533300001213WetlandMFFSEDELTAKSYAYMEIATYPEKFSDEITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHMNNVHALEAGTYQLSVKNTQSNILYSSILTKF*
JGIcombinedJ13530_10092360713300001213WetlandMFFSEEELTEKSDTFMEIATYPEKFSDEITVEISADSEDHCIIVLSNQVGRILRMMGVNVNQGKNQIHLDNVRSLEAGVYQLSVKNTQSNILYS
JGIcombinedJ13530_10358205023300001213WetlandMHYSDDEDTIQSNTCMEIFTYPEKFSNDLTVEICADAEDHCIIVLTNQMGRILRMMGVNVNQGKNQIRVDKVDTLEAGIYQLNVKNKNLNILYSSILTKF*
JGI12635J15846_1071126413300001593Forest SoilMYFSVDEFTSKSNAYMEIATYPEKFTDDITIEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNALEAGIYQLSVKNTDSNILHSSILTKF*
JGI20214J51088_1024070333300003432WetlandMFYTEEAPELKSDTCMEIETYPEKFSDEIIVDISTDAEDHCIIVLSNQTGXILRMMGVNLNLGKNQIHMXNIRTLEAGIYQLSVKNKQSDILYSSILTKF*
Ga0066823_1011092413300005163SoilMEIATYPLKFSDDITVDISADAEEHCIIVITNQRGRILRMMGVNVAKGKNQIHVENVNTLEAGVYQLSVKNKSSNVLYSSTLTKF*
Ga0070658_1080183923300005327Corn RhizosphereMFYLKEEPTPKPATQMEISSYPEKFSDDIVVEINAEAEDHCIIVLTNHSGRIRRMMGVNLNQGNNNIHVENVDTLESGLYHLSVKNIDSTLLYTSTLTKS*
Ga0070680_100000254273300005336Corn RhizosphereMFYLKEEQTPKPATPMEISSYPEKFSDDIVVEINSEAEDHCIIVLTNHSGRIRRMMGVNLSQGNNNIHVENVDTLESGLYQLSVKNVDSTLLYTSILTKS*
Ga0070659_10054859333300005366Corn RhizosphereMFYLKEEQTPKPATPMEISSYPEKFSDDIVVEINSEAEDHCIIVLTNHSGRIRRMMGVNLSQGNNNIHVENVDTLESGLYQLSVKNVDSTLLYTSIL
Ga0070659_10093413413300005366Corn RhizosphereEPTPKPATQMEISSYPEKFSDDIVVEINAEAEDHCIIVLTNHSGRIRRMMGVNLNQGNNNIHVENVDTLESGLYHLSVKNIDSTLLYTSTLTKS*
Ga0070731_1050556713300005538Surface SoilMEIAAYPEKFTNDLTVEINADSEDHCIIVLANSVGRILRMMGVNINQGKNQIHFDNVNTLESGIYQLSVKNINSNILYNSIITKF*
Ga0070733_1000333433300005541Surface SoilMEIATYPEKFSEDFTIEISTDSEEHCIIVLSNEVGRILRMMGVNIIQGKNKVHFDNVTMLEAGKYQICVKNSNSNVLYNSILTKF*
Ga0070763_1060761913300005610SoilMYFSVDEFTGKSNNYMEIATYPEKFTDNITVEISTDSEDHCIIVLSNHMGRILRMMGVNVNQGKNQIHVDNVNALEAGIYQLSVKNTESNILYSSILTKF*
Ga0066788_1000022033300005944SoilMFFSEEDLARKSSACMKIATHPETFSDDITVEISADSEDHCIIVLSNQLGRILRMMGVNVNQGKNEIHVDNVNALDAGIYQLSVKNTNSNILYSSILTKF*
Ga0066787_1000030663300005950SoilMYFSDEELTTQSETCMEIATFPEKFSDDITVEISADSEDHCIIVLSNHMGRILRMMGVNVNQGKNQIHVDNVKSLEAGIYQLSVKNANANILFSSILTKY*
Ga0066787_1004500533300005950SoilMYFSEDEFTVKSNTCMEIATYPEKFSDDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHMDNVNALEAGIYQLSVKNTNSNILYS
Ga0080027_10000041313300005993Prmafrost SoilMEIATYPEKFSDDIIVEINTDAEDHFIIVLSNQMGRILRMMGVNVIQGKNQIHVDHVNTLEAGIYQLSVKNTESNILFSSMITKF*
Ga0080027_10000760153300005993Prmafrost SoilMYFSEDEFTVKSNTCMEIATYPEKFSDDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHMDNVNALEAGIYQLSVKNTNSNILYSSILTKF*
Ga0080027_1000109783300005993Prmafrost SoilMFFSEEDLARKSSACMEIATHPETFSDDITVEISADSEDHCIIVLSNQLGRILRMMGVNVNQGKNEIHVDNVNALDAGIYQLSVKNTNSNILYSSILTKF*
Ga0080027_1003547323300005993Prmafrost SoilMEIATYPEKFSDDITIEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNTLEAGIYQLSVKNTNSNILYSSILTKF*
Ga0080027_1024838323300005993Prmafrost SoilMHFSVDEYTSKSDTYMEIATYPEKFNNDITVEIYADAEDHCIIVLANHMGRILRMMGVNVSQGKNHIHVENVNALKAGIYQLSVKNTDSNVLYSSILTKF*
Ga0066789_1000762033300005994SoilMEIASYPEKFSDDITVEISADSEDHCIIILSNHLGRILRIIGVNVNQGKNQIHMDNVRSLEAGPYHLSVKNTQSNILYSSILTKF*
Ga0075028_10004503313300006050WatershedsMEIATYPEKFSDDITIEIDTDSEDHCIIVLSNQVGRILRMMGVNVRQGKNKVHFDNVTMLEAGTYQISVKNTNSNILYSSMLTKF*
Ga0075029_10020135033300006052WatershedsMIFSVDEQNIQTRNAMEIASFPEKFSDEITVEINADAEDHCIIILSNQVGRILRMMGVNVNQGINKIQMDNVKALESGIYQLSVKNTHSSILYTSIVTKF*
Ga0075026_10007924213300006057WatershedsVDINADSEDHCIIVLTNQMGRILRMMGVNVNQGENQIHVDNVNSLEAGTYHLSVKNTKSNILYSSIITKF*
Ga0075017_10000315453300006059WatershedsMIFSVDEQNIQTRNAMEIASFPEKFSDEITVEINADAEDHCIIVLSNQVGRILRMMGVNVNQGINKIQMDNVRALESGIYQLSVKNTHSSILYTSIVTKF*
Ga0075017_10035847323300006059WatershedsSNTCMEIASFPEKFTDDITVEISAESEDHCIIVLSNQMGRVLRMMGVNVNQGKNQIHMDNVRSLEAGIYQLSVKNTQSNILYSSILTKF*
Ga0075017_10147815733300006059WatershedsMYFSVDEFTCKSKAYMEIATYPEKFTDDITIEISADSEDHCIIVLSNHMGRILRMMGVNVIQGKNQIHVENVNSLEAGIYQ
Ga0075019_1003154333300006086WatershedsMIFEVEEYSSQSNSCLEITAFPKKISDQITIEIHADSEDHCIVVLSNQVGRILRMRGARVNKGKNKIQMDNVRSLESGLYQLSVKNKQSIILYTSILTKF*
Ga0075019_1100529823300006086WatershedsMLFSVDEFIVKSNTCMEIASFPEKFSDDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHMDNVRTLEAGIYQLSVKNTQSNILYSSILTKF*
Ga0075015_10062529613300006102WatershedsPVMIFSVDEQNIQTRNAMEIASFPEKFSDEITVEINADAEDHCIIVLSNQVGRILRMMGVNVNQGINKIQMDNVKALESGIYQLSVKNTHSSILYTSIVTKF*
Ga0070715_1045298313300006163Corn, Switchgrass And Miscanthus RhizosphereLSRFRLRTRERVFLTKTITSKMFFSEDEITAKCSTYMEIATYPEKFSDEITVEISADSEDHCIIVLCNQTGRILRMMGVNVNQGKNQIHLDNVHSLEAGVYQLSVKNTQLNILYSSILTKF*
Ga0070715_1092380923300006163Corn, Switchgrass And Miscanthus RhizosphereMQITTTGNMEIATYPEKFSDDITIEISTDSEEHCIIVLSNQVGQILRMMGVNVIQGINKVHVDNVTKLEAGTYRISVKNPNSNILYSSILTKF*
Ga0075014_10013823813300006174WatershedsMIFSVDEQNIQTRNAMEIASFPEKFSDEITVEINADAEDHCIIVLSNQVGRILRMMGVNVNQGINKIQMDNVKALESGIYQL
Ga0097621_10038193023300006237Miscanthus RhizosphereMYFSEVELMGKSDTYMEIATYPENFSDDITVEISADSEDHCIIVLSNQTGRILRMMGVNVNQGKNQVHVDNVNSLEAGIYQLSVKNINSNILYSSILTKL*
Ga0075021_1040651023300006354WatershedsMKIATYPEKFTDDITVDINADSEDHCIIVLTNQMGRILRMMGVNVNQGENQIHVDNVNSLEAGTYHLSVKNTKSNILYSSIITKF*
Ga0075522_1002494643300006638Arctic Peat SoilMFYLEEEQFPKPENPMEISSHPAKFSNDIVVEIKADTEDHCIIVLTNHSGRIRRMMGVNLIRGTNDIHVENVDTLEAGLYQLSVKNTESTLLYTSILTKP*
Ga0075521_1000279233300006642Arctic Peat SoilMLFSQEKPTGQSGTCMEISTYPEKFSDDITVEISAESEDHCIIILSNHLGRILRMMGVNINQGKNQIHMDNIRSLDAGLYQLSVKNTQSNILYSSILTKF*
Ga0075521_1023529923300006642Arctic Peat SoilMEIASYPEKFSDDITVEISTDFEDHCIIMLSNQVGRILRMMGVNVIQGKNEIHFDNVTMLEAGTYQISVKNTTSNILYSSTLTKF*
Ga0104322_12814523300007819Permafrost SoilMLTLVSGNMEIATYPEKFSDDITIEISTDSEDHCIIVLSNQGGRILRMMGVNVIQGKNKVHFDNVTMLEAGTYQISVKNTNSNILYSSILTKF*
Ga0105240_1194229033300009093Corn RhizosphereEEPTPKPATQMEISSYPEKFSDDIVVEINAEAEDHCIIVLTNHSGRIRRMMGVNLNQGNNNIHVENVDTLESGLYHLSVKNIDSTLLYTSTLTKS*
Ga0105241_1212816513300009174Corn RhizosphereMFYLKEEPTPKPATQMEISSYPEKFSDDIVVEINAEAEDHCIIVLTNHSGRIRRMMGVNLSQGNNNIHVENVDTLESGLYHLIVKNIDSTLLYTSTLTKS*
Ga0134128_1174381623300010373Terrestrial SoilMFYLKEEQTPKPATLMEISSHPEKFSNDIVVEISADAEDHCIIVLTNHSGRIRRMMGVNLNQGKNNIHVENVDTLETGLYQLSVKNTDSVVLYTSILTKS*
Ga0134128_1320085513300010373Terrestrial SoilEEEPGPKPENPMEISTHPVKFSDDLVVEIKAETEDHCIIVLTNHSGRIRRMMGVNLNRGVNDIHVENVDSLEAGLYQLSVKNTDSTLLYTSILTKSE*
Ga0150983_1310772923300011120Forest SoilMNFSVDEFTGKSNNYMEIATYPEKFTDNITVEISTDSEDHCIIVLSNHMGRILRMMGVNVNQGKNQIHVDNVNALEAGIYQLSVKNTESNILYSSILTKF*
Ga0137404_1113502723300012929Vadose Zone SoilMYFSEDEFTADPIQHIMEIATYPEKFSDNITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVHMLEAGIYQLSVKNTNSNVLYSSILTKF*
Ga0164241_1076161713300012943SoilMFYLKEEQTPKPATLMEISSHPEKFSDDIVVEISTDAEDHCIIVLTNHSGRIRRMMGVNLNQGKNSIHVENVDTLETGLYQLSVKNTDAVVLYTSILTKS*
Ga0163162_1147913513300013306Switchgrass RhizosphereMEIATYPVKFSDDITVDISADTEEHCIIVITNQRGRILRMMGVNVAKGKNQIHVENVNTLEAGVYQLSVKNKSSNVLYSSTLTKF*
Ga0157375_1121995733300013308Miscanthus RhizosphereMEIATYPVKFSDDITVDISADTEEHCIIVITNQRGRILRMMGVNVAKGKNQIHVENVDTLEAGVYQLSVKNKSSNVLYSSTLTKF*
Ga0157375_1256792123300013308Miscanthus RhizosphereMEIATYPEKFSDDITIEISTDSEEHCIIVLSNQVGQILRMMGVNVIQGKNKVHFDNVTKLEAGTYQISVRNPNSNILYSSILTK
Ga0120132_100599823300013832PermafrostMYYSEGELTATSNSNMEIATYPEKFSDDIIVEISAETEDHCIIVLSNQMGRILRMMGVNVNRGKNKIHVDNVSSLEAGIYQLSVKNTNSNILYSSILTKF*
Ga0075356_116043413300014323Natural And Restored WetlandsIKTITSKMYFSADERTAKCSTYMEIATYPEKFSDEITVEISTDSEDHCIIVLCNQTGRILRMMGVNVNQGKNQIHLDNVRSLEAGVYHLSVKNTQLNILYSSILTKF*
Ga0182024_10001774473300014501PermafrostMYYLEEDVNPKSVSSMEISSHPDKFSDDITVEISADAEDHCIIVLANQSGRIRRMMGVNINQGKNNIHVENVDTLESGLYQLSVKNTDSTLLYSSILTKS*
Ga0157379_1035083533300014968Switchgrass RhizosphereMFFSVDEIPAKSSTYMEIATYPEKFSEEITVEISADSEDHCIIVLCNQKGRILRMMGVNVNQGKNQIHIDNVRSLEAGVYQLSIKNTQLNILYSSILTKF*
Ga0157376_1006119523300014969Miscanthus RhizosphereVYFTEDELAVKSDTYMEIATYPEKFSDDITVEISADIEDHCIIVLSNEMGRILRMMGVNVNQGKNQIHVDNVVDLDAGIYQLSVKNTNSNILYSSTLTKF*
Ga0157376_1007918733300014969Miscanthus RhizosphereMYFSEVELTGKSDTYMEIATYPENFSDDITVEISADSEDHCIIVLSNQTGRILRMMGVNVNQGKNQVHVDNVNSLEAGIYQLSVKNINSNILYSSILTKL*
Ga0157376_1068101123300014969Miscanthus RhizosphereTVDISADTEEHCIIVITNQRGRILRMMGVNVAKGKNQIHVENVNTLEAGVYQLSVKNKNSNVLYSSTLTKF*
Ga0157376_1198415313300014969Miscanthus RhizosphereMEIATYPEKFSDDITVEISADSEDHCIIILSNHLGRILRMMGVNVNQGKNHIHMDNVRTLQAGLYKLSVKNTQSNVLYSSILTKF*
Ga0157376_1212302923300014969Miscanthus RhizosphereTVDISADTEEHCIIVITNQRGRILRMMGVNVAKGKNQIHVENVNTLEAGVYQLSVKNKSSNVLYSSTLTKF*
Ga0184625_1032217333300018081Groundwater SedimentMYFSENELTGKYVTYMEIATYPEKFSDDITVEISTESEDHCIIVLSNHLGRILRMMGVNVIKGKNHIHVDNVNSLEAGIYQLSVKNTNSNILYSSILTKF
Ga0193744_102061423300019874SoilMLTMVTGNMEIASYPEQFSDNITIEIDTDSEEHCIIVLSNQLGRILRMMGVNVIQGKNKVHFDNVTMLEAGTYQISVKNTNSNILYSSILTKF
Ga0193727_107633823300019886SoilMLTMVTGNMEIASYPEQFSDDITIEIDTDSEEHCIIVLSNQLGRILRMMGVNVIQGKNKVHFDNVTMLEAGTYQISVKNTNSNILYSSILTKF
Ga0193718_107877813300019999SoilMLTMVTGNMEIASYPEQFSDDITIEIDTDSEEHCIIVLSNQLGRILRMMGVNVIQGKNKVHFENVMMLEAGTYQISVKNTNSNILYSSILTKF
Ga0193726_103113123300020021SoilMFFSEEDLAHKSNACMEIATHPETFSDDITVEISADSEDHCIIVLSNQLGRILRMMGVNVNQGKNEIHVDNVNALEAGIYQLSVKNTNSNIFYSSILTKF
Ga0193726_110479333300020021SoilMYFSEDEFTVKSTTCMEIATYPEKFSDDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHMDNVNALEAGIYQLSVKNTNSNILYSSILTKF
Ga0193726_121611813300020021SoilMEIATYPEKFSDDITIEISTDSEDHCIIVLSNQVGRILRMMGVNVIQGKNKVHFDNVTMLEAGTYQISVKNTNSNILYSSILTKF
Ga0193716_110551913300020061SoilMFFSEEDLAHKSNACMEIATHPETFSDDITVEISADSEDHCIIVLSNQLGRILRMMGVNVNQGKNEIHVDNVNALEAGIYQLSVKNTNSNILYSSILTKF
Ga0193724_100450833300020062SoilMEIATYPEKFSDDITIEINTDSEDHYIIVLSNPVGRILRMMGVNVIQGKNKVHFDNVTMLEAGTYQISVKNTNSNILYSSMLTKF
Ga0210407_1086897123300020579SoilMYFSVDESTGKSNTYMEIATYPEKFTDDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNALDAGIYQLSVKNTNSNILYSSILTKF
Ga0210399_1008480023300020581SoilMEIATYPEKFSDDITIEISTDSEDHCIIVLSNQGGRILRMMGVNVIQGKNKVHFDNVTMLEAGIYQISVKNTNSNILYSSILTKF
Ga0210399_1134527413300020581SoilMYFPVDEFTGKSNTYMEIATYPEKFTNDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNHIHVDNVNTLEAGIYQLSVKNTDSNILYSSILTKF
Ga0210396_1005246933300021180SoilMEIAAYPEKFTDDITVEINADSEDHCIIVLANDVGRILRMMGVNINQGKNQIHFDNVNTLESGDYQLSVKNTSSNVLYNSIITKF
Ga0210388_1087429523300021181SoilMYFAVDEFTSKSNTYMEIATYPEKFTDDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNALEAGIYQLSVKNTNSNILYSSILTKF
Ga0193699_1045490913300021363SoilMLTIITSSMEIATYPEKFSDDITIEINTDSEDHYIIVLSNPVGRILRMMGVNVIQGKNKVHFDNVTMLEAGTYQISVKNTNSNILYSSMLTKF
Ga0210397_1005510923300021403SoilMYISDDEFTGKATAFMEIATYPDKFSDDITVEISADSEDHCIIVLSNQLGRILRMMGVNVTQGKNQIHVDNVKALEAGIYQLSVKNTNSNILYSSILTKF
Ga0210397_1011151723300021403SoilMEIATYPEKFSDDITIEISTDSEDHCVIVLSNQGGRILRMMGVNVIQGKNKVHFDNVTMLEAGIYQISVKNTNSNILYSSILTKF
Ga0210397_1026476023300021403SoilMYFSDDEFTGNSTSYIMEIASYPEKFSDDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNALDAGIYQLSVKNKNSNVLYSSILTKF
Ga0210397_1084530633300021403SoilMEIAAYPEKFTDDITVEINADSEDHCIIVLANDVGRILRMMGVNINQGKNQIHFDNVNTFESGDYQLSVK
Ga0210397_1092262023300021403SoilSTSYIMEIASYPDKFSDDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNSLDAGIYQLSVKNKNSNVLYSSILTKF
Ga0210397_1158825213300021403SoilFTDDITVEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNHIHVDNVNTLEAGIYQLSVKNTDSNILYSSILTKF
Ga0210383_1088644623300021407SoilMYFPVDEFTGKSNTYMEIATYPEKFTDDITVEISADSEDHCIIVLTNQMGRILRMMGVNVNQGKNHIHVDNVNTLEAGIYQLSVKNTDSNILYSSILTKF
Ga0210394_1002934053300021420SoilMYFSVDEFTSKSNAYMEIATYPEKFSDDITIEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNALEAGIYQLSVKNTDSNILYSSILTKF
Ga0210394_1034586523300021420SoilMEIATYPEKFSDDITIEISTDSEDHCIIVLSNQGGRILRMMGVNVIQGKNKVHFDNVTMLESGIYQISVKNTNSNILYSSILTKF
Ga0210394_1155494723300021420SoilMYFAVDEFTSKSNTYMEIATYPEKFTDDITIEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNALEAGIYQLSVKNTNSNI
Ga0210384_10003834143300021432SoilMYFSVDEFTGKSNNYMEIATYPEKFTDNITVEISTDSEDHCIIVLSNHMGRILRMMGVNVNQGKNQIHVDNVNALEAGIYQLSVKNTESNILYSSILTKF
Ga0210384_1069023923300021432SoilMLTLISGNMEIATYPEKFSDDITIEISTDSEDHCIIVLSNQGGRILRMMGVNVIQGKNKVHFDNVTMLESGIYQISVKNTNSNILYSSILTKF
Ga0210410_1082288813300021479SoilMFLPDEELTGNSNCFTEIASYPEKFSDDITVEISAESEDHCIIVLSNQMGRILRMMGVNVNQGKNEIHVDNVNSLEAGIYQLSVKNKNSNILFSSILTKF
Ga0210410_1116994913300021479SoilMLTIIFGNMEIATYPEKFSDDITIEISTDSEDHCVIVLSNQGGRILRMMGVNVIQGKNKVHFDNVTMLEAGIYQISVKNTNSNILY
Ga0224548_101338933300022518SoilMYYLEEDVNPKSVSSMEISSHPDKFSDDITVEISADAEDHCIIVLANQSGRIRRMMGVNINQGKNNIHVENVDTLESGLYQLSVKNTDSTLLYSSILTKS
Ga0208077_101659433300025427Arctic Peat SoilMLFSQEKPTGQSGTCMEISTYPEKFSDDITVEISAESEDHCIIILSNHLGRILRMMGVNINQGKNQIHMDNIRSLDAGLYQLSVKNTQSNILYSSILTKF
Ga0208715_106049913300025482Arctic Peat SoilMEIATYPEKFSDDITVEISADAEDHCIIVLTNQTGGIIRMMGVNVNQGQNHVHVENVQMLEAGTYQLSVKNTKSNVLYSSVLTKF
Ga0207928_103970213300025494Arctic Peat SoilMYFSDEELTTQSETCMEIATFPEKFSDDITVEISADSEDHCIIVLSNHMGRILRMMGVNVNQGKNQIHVDNVKSLEAGIYQ
Ga0207929_102613623300025505Arctic Peat SoilMNFSVDEHTGKSNTYMEIAAYPEKFNDDITVEICADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNTLEAGIYQISVKNTNSNVLYSSILTKF
Ga0208586_106330313300025588Arctic Peat SoilMLFSVEEFTSKSNKAMEIAAYPEKFSDDITVEINSDSEDHCIIVLSNNMGRILRMMGVNINEGKNQIHFDSVNTLEAGIYQLSVKNASSNILYSSIITKF
Ga0209483_107581123300025862Arctic Peat SoilMFYLEEEQFPKPENPMEISSHPAKFSNDIVVEIKADTEDHCIIVLTNHSGRIRRMMGVNLIRGTNDIHVENVDTLEAGLYQLSVKNTESTLLYTSILTKP
Ga0209584_1016068713300025878Arctic Peat SoilMEIASYPEKFSDDITVEISTDFEDHCIIMLSNQVGRILRMMGVNVIQGKNEIHFDNVTMLEAGTYQISVKNTTSNILYSSTLTKF
Ga0207705_1044576233300025909Corn RhizosphereMFYLKEEPTPKPATQMEISSYPEKFSDDLVVEINAEAEDHCIIVLTNHSGRIRRMMGVNLNQGNNNIHVENVDTLESGLYHLSVKNIDSTLLYTSTLTKS
Ga0207654_1000048353300025911Corn RhizosphereMFYLKEEQTPKPATPMEISSYPEKFSDDIVVEINSEAEDHCIIVLTNHSGRIRRMMGVNLSQGNNNIHVENVDTLESGLYQLSVKNVDSTLLYTSILTKS
Ga0207657_1069908433300025919Corn RhizosphereISSHPEKFSNDIVVEISADAEDHCIIVLTNHSGRIRRMMGVNLNQGKNNIHVENVDTLESGLYQLSVKNVDSTLLYTSILTKS
Ga0207652_1114683913300025921Corn RhizosphereMEISSYPEKFSDDIVVEINSEAEDHCIIVLTNHSGRIRRMMGVNLNQGNNNIHVENVDTLESGLYQLSVKNTDSTLLYTSILTKS
Ga0207674_1038629733300026116Corn RhizosphereMFYLKEEPTPKPATQMEISSYPEKFSDDIVVEINAEAEDHCIIVLTNHSGRIRRMMGVNLNQGNNNIHVENVDTLESGLYHLSVKNIDSTLLYTSTLTKS
Ga0209838_100119633300026214SoilMYFSDEELTTQSETCMEIATFPEKFSDDITVEISADSEDHCIIVLSNHMGRILRMMGVNVNQGKNQIHVDNVKSLEAGIYQLSVKNANANILFSSILTKY
Ga0209849_100049683300026215SoilMFFSEEDLARKSSACMEIATHPETFSDDITVEISADSEDHCIIVLSNQLGRILRMMGVNVNQGKNEIHVDNVNALDAGIYQLSVKNTNSNILYSSILTKF
Ga0209863_1000048933300026281Prmafrost SoilMEIATYPEKFSDDIIVEINTDAEDHFIIVLSNQMGRILRMMGVNVIQGKNQIHVDHVNTLEAGIYQLSVKNTESNILFSSMITKF
Ga0209863_1002572633300026281Prmafrost SoilMEIATYPEKFSDDITIEISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHVDNVNTLEAGIYQLSVKNTNSNILYSSILTKF
Ga0209890_1005308633300026291SoilASYPEKFSDDITVEISADSEDHCIIILSNHLGRILRIIGVNVNQGKNQIHMDNVRSLEAGPYHLSVKNTQSNILYSSILTKF
Ga0209693_1042278313300027855SoilMYFSVDEFTGKSNNYMEIATYPEKFTDNITVEISTDSEDHCIIVLSNHMGRILRMMGVNVNQGKNQIHVDNVNALEAGIYQLSVKNTQSNILYSSILTKF
Ga0209167_1000556353300027867Surface SoilMEIATYPEKFSEDFTIEISTDSEEHCIIVLSNEVGRILRMMGVNIIQGKNKVHFDNVTMLEAGKYQICVKNSNSNVLYNSILTKF
Ga0209579_1042042323300027869Surface SoilMEIAAYPEKFTNDLTVEINADSEDHCIIVLANSVGRILRMMGVNINQGKNQIHFDNVNTLESGIYQLSVKNINSNI
Ga0209068_1004499933300027894WatershedsMEIATYPEKFSDDITIEIDTDSEDHCIIVLSNQVGRILRMMGVNVRQGKNKVHFDNVTMLEAGTYQISVKNTNSNILYSSMLTKF
Ga0209068_1040209823300027894WatershedsMKIATYPEKFTDDITVDINADSEDHCIIVLTNQMGRILRMMGVNVNQGENQIHVDNVNSLEAGTYHLSVKNTKSNILYSSIITKF
Ga0209068_1070012023300027894WatershedsMFFSVDDFIIKSNTYMEIASFPEKFTDDITVVISADSEDHCIIVLSNQMGRILRMMGVNVNQGKNQIHMENVRTLKAGIYQLSVKNTQSN
Ga0209067_1004506833300027898WatershedsMIFEVEEYSSQSNSCLEITAFPKKISDQITIEIHADSEDHCIVVLSNQVGRILRMRGARVNKGKNKIQMDNVRSLESGLYQLSVKNKQSIILYTSILTKF
Ga0209006_1082456513300027908Forest SoilMFLQDDELTSKSNCFTEIASYPEKFSDDITVEISAESEDHCIIVLSNQMGRILRMMGVNVNRGKNEIHVDNVNSLEAGIYQLSVKNKNSYILFSSILTKF
Ga0209069_1037666013300027915WatershedsMEIATYPEKFSDDITIEIDTDSEDHCIIVLSNQVGRILRMMGVNVNQGINKIQMDNVRALESGIYQLSVKNTHSSILY
Ga0209526_1080722723300028047Forest SoilPEKFSDDITVEISAESEDHCIIVLSNQMGRILRMMGVNVNQGKNEIHVDNVNSLEAGIYQLSVKNKNSNILFSSILTKF
Ga0247036_102873923300029897CryconiteMFYLTDEADSNVNPMIEIASFPKTFSDDITVEIDADTADHCIIVLSNQAGRILRMMGVNVNEGKTNIHVENVTSLEAGIYQLSVKNTNANTLYSSILTKF
Ga0170834_10131419713300031057Forest SoilMEIAAYPEKFTDEITVEINADSEDHCIIVLANSVGRILRMMGVNINQGKNQIHFNNVNTLESGIYQLSVKNTNSNILYNSIITKF
Ga0170834_10648832013300031057Forest SoilPEKFSDDITVEISAESEDHCIIILSNHLGRILRMVGVNLNQGKNQIHMDNVRTLDAGLYELSVKNTQSNILYSSILTKF
Ga0170834_10909213013300031057Forest SoilMEIATYPIKFSDDITVDISADTEEHCIIVITNHRGRILRMMGVNVAKGKNEIHVENVNTLEAGVYQLSVKNKSSNVLYSSTLTKF
Ga0170834_10941558533300031057Forest SoilMEIVTYPEKFSDDITIEISTDSEDHCIIVLSDQVGRILRMMGVNVIQGKNKVHFDNVIMLEAGIYQISVKNTNSNILYSSILTKF
Ga0170822_1585921613300031122Forest SoilVTYPEKFSDDITIEINTDSEDHCIIVLSDQVGRILRMMGVNVIQGKNKVHFDNVIMLEAGIYQISVKNTNSNILYSSILTKF
Ga0307473_1123956123300031820Hardwood Forest SoilMYFIEDELKCKSDAYMEILTYPEKFSDDITVEISADAEAHCIIVLSNQMGRILRMMGVNVNEGKNQVHVDNVTGLEAGIYNLSVKNTNSNILFSSILTKF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.