Metagenome / Metatranscriptome Family F064904

Basic Information
Family ID	F064904
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	43 residues
Representative Sequence	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRLIAAAAPP
Number of Associated Samples	126
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.26 %
% of genes near scaffold ends (potentially truncated)	80.47 %
% of genes from short scaffolds (< 2000 bps)	70.31 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Bacteria (60.938 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.562 % of family members)
Environment Ontology (ENVO)	Unclassified (25.781 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.500 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.86% β-sheet: 0.00% Coil/Unstructured: 47.14%
Feature Viewer

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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF06421	LepA_C	94.53
PF05768	Glrx-like	1.56
PF00009	GTP_EFTU	0.78
PF13365	Trypsin_2	0.78
PF17188	MucB_RseB_C	0.78
PF02910	Succ_DH_flav_C	0.78
PF03144	GTP_EFTU_D2	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0481	Translation elongation factor EF-4, membrane-bound GTPase	Translation, ribosomal structure and biogenesis [J]	94.53
COG0695	Glutaredoxin	Posttranslational modification, protein turnover, chaperones [O]	1.56
COG3118	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	Posttranslational modification, protein turnover, chaperones [O]	1.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.72 %
Unclassified	root	N/A	38.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.72 %
Unclassified	root	N/A	38.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.94 %
Unclassified	root	N/A	38.28 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.12 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1.56 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.56 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
campanulids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Asterales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Asteraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Asteroideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Anthemideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Anthemidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Tanacetum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.28 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.56 %
Tanacetum cinerariifolium	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102123999	Not Available	1269	Open in IMG/M
3300001661\|JGI12053J15887_10061180	Not Available	2092	Open in IMG/M
3300002245\|JGIcombinedJ26739_101706940	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005164\|Ga0066815_10110443	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005332\|Ga0066388_106410704	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005436\|Ga0070713_100556424	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300005439\|Ga0070711_101412540	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005447\|Ga0066689_10061657	Not Available	2048	Open in IMG/M
3300005533\|Ga0070734_10446025	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005844\|Ga0068862_101320973	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300005952\|Ga0080026_10269579	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300006176\|Ga0070765_101310914	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300009174\|Ga0105241_10009366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7198	Open in IMG/M
3300009551\|Ga0105238_10287837	Not Available	1625	Open in IMG/M
3300010048\|Ga0126373_11672018	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300010360\|Ga0126372_11473724	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300010361\|Ga0126378_12613311	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300011120\|Ga0150983_15850082	Not Available	630	Open in IMG/M
3300012205\|Ga0137362_10827672	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300012349\|Ga0137387_10391663	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300012387\|Ga0134030_1160313	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300012683\|Ga0137398_10807139	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300012917\|Ga0137395_10197706	Not Available	1398	Open in IMG/M
3300014322\|Ga0075355_1206532	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300017645\|Ga0182749_1014574	Not Available	3880	Open in IMG/M
3300017961\|Ga0187778_10396851	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300017974\|Ga0187777_10674117	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300020170\|Ga0179594_10060949	Not Available	1295	Open in IMG/M
3300021170\|Ga0210400_10256602	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300021171\|Ga0210405_10570071	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300021361\|Ga0213872_10428061	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300021384\|Ga0213876_10115114	Not Available	1427	Open in IMG/M
3300021403\|Ga0210397_10452210	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300021406\|Ga0210386_11817736	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300021420\|Ga0210394_11030709	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300021560\|Ga0126371_10887277	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300021861\|Ga0213853_10497049	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300022724\|Ga0242665_10069578	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300023259\|Ga0224551_1045957	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300023267\|Ga0247771_1197335	Not Available	594	Open in IMG/M
3300024330\|Ga0137417_1422002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4136	Open in IMG/M
3300025898\|Ga0207692_10815584	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300025900\|Ga0207710_10417468	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300025910\|Ga0207684_11389595	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300025915\|Ga0207693_10767764	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300025929\|Ga0207664_11860192	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300026295\|Ga0209234_1227383	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300026306\|Ga0209468_1051566	Not Available	1394	Open in IMG/M
3300027167\|Ga0208096_101677	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300027388\|Ga0208995_1044281	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300027460\|Ga0207506_1018689	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300027463\|Ga0207627_103150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300027521\|Ga0209524_1026445	Not Available	1208	Open in IMG/M
3300027565\|Ga0209219_1000894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4984	Open in IMG/M
3300027616\|Ga0209106_1000606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5523	Open in IMG/M
3300027648\|Ga0209420_1210844	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300027681\|Ga0208991_1178466	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300027855\|Ga0209693_10217901	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300028573\|Ga0265334_10238470	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300028775\|Ga0302231_10215910	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300028780\|Ga0302225_10144855	Not Available	1152	Open in IMG/M
3300030524\|Ga0311357_10936783	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300030617\|Ga0311356_11011109	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300030618\|Ga0311354_10729139	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300030906\|Ga0302314_11919283	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031027\|Ga0302308_10544623	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031446\|Ga0170820_10601181	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031543\|Ga0318516_10772911	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031545\|Ga0318541_10025307	All Organisms → cellular organisms → Bacteria → Proteobacteria	2889	Open in IMG/M
3300031561\|Ga0318528_10809962	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031573\|Ga0310915_10607009	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300031640\|Ga0318555_10658680	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300031668\|Ga0318542_10015105	All Organisms → cellular organisms → Bacteria → Proteobacteria	3044	Open in IMG/M
3300031668\|Ga0318542_10233746	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300031680\|Ga0318574_10491148	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300031720\|Ga0307469_10447801	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300031720\|Ga0307469_12233774	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300031723\|Ga0318493_10104669	Not Available	1424	Open in IMG/M
3300031740\|Ga0307468_100105778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1687	Open in IMG/M
3300031751\|Ga0318494_10935063	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300031753\|Ga0307477_10843434	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300031769\|Ga0318526_10315023	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031771\|Ga0318546_10215460	Not Available	1315	Open in IMG/M
3300031779\|Ga0318566_10052208	Not Available	1944	Open in IMG/M
3300031793\|Ga0318548_10030385	Not Available	2365	Open in IMG/M
3300031796\|Ga0318576_10405114	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031799\|Ga0318565_10044948	Not Available	2036	Open in IMG/M
3300031831\|Ga0318564_10150011	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300031832\|Ga0318499_10290278	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300031880\|Ga0318544_10340689	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300031894\|Ga0318522_10132261	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300031897\|Ga0318520_10242117	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300031942\|Ga0310916_11716558	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300032008\|Ga0318562_10164568	Not Available	1280	Open in IMG/M
3300032009\|Ga0318563_10074396	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	1768	Open in IMG/M
3300032025\|Ga0318507_10130330	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300032043\|Ga0318556_10573392	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300032174\|Ga0307470_10691413	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300032180\|Ga0307471_100694980	Not Available	1181	Open in IMG/M
3300032205\|Ga0307472_100142825	Not Available	1734	Open in IMG/M
3300032805\|Ga0335078_10299009	Not Available	2165	Open in IMG/M
3300033489\|Ga0299912_10231674	Not Available	1576	Open in IMG/M
3300034125\|Ga0370484_0009478	Not Available	2055	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.94%
Host-Associated	Host-Associated	14.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.16%
Plants	Host-Associated → Plants	14.06%
Aquatic	Environmental → Aquatic	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.03%
Peat	Environmental → Terrestrial → Peat	6.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.03%
Loam	Environmental → Terrestrial → Soil → Loam	16.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.12%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.25%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.12%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.56%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.78%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017645	Enriched Miracle-Growth compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C Kraft MG (version 2)	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300023267	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L197-509C-6	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300027167	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF034 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300027463	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK03-C (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064904

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1021239992	3300000955	Soil	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRLIAA
JGI12053J15887_100611802	3300001661	Forest Soil	MFQIIVILSWLALPVGLLVIVDDWFIRPRRQIAASPQ
JGIcombinedJ26739_1017069402	3300002245	Forest Soil	MLDMLMPLLVLLSWLALPVAVICVVDDWLLRPQRAARLG
Ga0066815_101104432	3300005164	Soil	MLQSLMPLIILMSWLALPVTLICIVDDWFLRPRRTLAAAPGAQVVRDGTFMT
Ga0066388_1064107042	3300005332	Tropical Forest Soil	MLQALMPTIVVLSWLALPVTILCIIDDWFLRPRRALAALPAGAGGGE
Ga0070713_1005564241	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPQLLMQIIVFLSWLALPVGVLCIADDWFLRPRRQILAAPQEARDPP
Ga0070711_1014125401	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPQLLMQIIVFLSWLALPVGVLCIADDWFLRPRRQILAAPQEAR
Ga0066689_100616572	3300005447	Soil	MLQTLMPLIVLLSWLALPVTVVCIVDDWLLRPQRAIAASAR
Ga0070734_104460252	3300005533	Surface Soil	MQMLMPIAYYLSLLAIPVGLFCIYDDWFVRPRRQVAAAPQEA
Ga0070686_1004628652	3300005544	Switchgrass Rhizosphere	MFQIIVILSWLALPIGLLVIADDWFIRPRRQIAASPQPPADPLLMRTAYMLLPLFIGAAVLRLLL
Ga0068852_1015163991	3300005616	Corn Rhizosphere	MFFQIIALLSWLAIPAGLLVIIDDWFIRPRRQIAASPAPPA
Ga0068863_1021910151	3300005841	Switchgrass Rhizosphere	MIFQIIGLLSWLAIPVGLIVIIDDWFIRPRRQIAASP
Ga0068862_1013209731	3300005844	Switchgrass Rhizosphere	MQMLMKLIMLLSWAAIPVAIICVVDDWFLRPKRQLAA
Ga0080026_102695791	3300005952	Permafrost Soil	MLMQIIVGLSWLALPVALVCLIDDLFLRPRRQIAALPQPVRDPPLAAA
Ga0070765_1013109142	3300006176	Soil	MFMQIIVALSWLALPVGLVCLADDWFLRPRRQIAALPQPARDPP
Ga0105241_100093669	3300009174	Corn Rhizosphere	MLQSLMPLIVLMSWLALPVTLICIVDDWFLRPRRTLA
Ga0105237_107555092	3300009545	Corn Rhizosphere	MQILVILSWLALPIGLLVIADDWFIRPSRQIAASPQPPVDPPVMRIAYLLLPLFIGAAVL
Ga0105238_102878372	3300009551	Corn Rhizosphere	MLMQIIVLLSWLALPVGVLCVVDDWFLRPRRQIAAA
Ga0126373_116720182	3300010048	Tropical Forest Soil	MSAIVLLSWLAVPVGLVCIVDDWFLRPQRLIAAPTPPR
Ga0126372_114737242	3300010360	Tropical Forest Soil	MLQALMPTIVVLSWLALPVTLICIVDDWFLRPRRALAPVPAREPPPEA
Ga0126378_126133112	3300010361	Tropical Forest Soil	MSVIVVLSWLALPVAVACIVDDWFLRPRRVIAASAPP
Ga0126361_102053901	3300010876	Boreal Forest Soil	MLQIIALLSWLALPVGLIVIADDWFFRPRRQIAASPAPPVDPPLMKTLYMLLP
Ga0150983_158500822	3300011120	Forest Soil	MQIVVLLSWLALPVGVLCIVDDWFLRPRRQIAAAPQEARDPPAIS
Ga0137393_116099462	3300011271	Vadose Zone Soil	MFQIIVILSWLALPIGLLVIADDWFIRPRRQIAAAPQPPADPPLMRTAYM
Ga0137362_108276722	3300012205	Vadose Zone Soil	MQMLMPIVVFLSWLALPVGLLCIADDWFLRPRRQI
Ga0137381_107482532	3300012207	Vadose Zone Soil	MLFQIIVILSWLALPVGLLVIADDWFIRPRRQIAASPQPPTDPALI
Ga0137387_103916632	3300012349	Vadose Zone Soil	MLQTLMPFIVLLSWLALPVTLICILDDWLLRPRRV
Ga0134030_11603132	3300012387	Grasslands Soil	MLQTLMPLIVLLSWLALPVTVVCIVDDWLLRPQRSIAASART
Ga0137398_108071391	3300012683	Vadose Zone Soil	MLQTLMPLIVLLSWLALPVTLVCIVDDWLLRPRRV
Ga0137395_101977061	3300012917	Vadose Zone Soil	MLQTLMPLIVLLSWLALPVTVVCIVDDWLLRPRRVIASGLQTVRDG
Ga0137394_109033622	3300012922	Vadose Zone Soil	MFQIIVILSWLALPIGLLVIVDDWFIRPRRQIAASPQPPTDP
Ga0137359_112022121	3300012923	Vadose Zone Soil	MLQTISNVAWFFSWLAIPVGLLVIIDDWFIRPRRQVAASPQPPVDPPLMRAAYMLLPL
Ga0137413_115129161	3300012924	Vadose Zone Soil	MFQIIVILSWLALPIGLLVIADDWFFRSRRQIAASPQPPVDPPLMRAAYL
Ga0137410_107955841	3300012944	Vadose Zone Soil	MFQILFNVSWLYSWLAIPVGLLVIMDDWFVRPRRQIAASPQPPVDPPLMRTAYMLLPLFI
Ga0157369_105628841	3300013105	Corn Rhizosphere	MFFQIIALLSWLAIPAGLLVIIDDWFIRPRRQIAASPAPPADPALM
Ga0163162_114817002	3300013306	Switchgrass Rhizosphere	MFFQMIGYLSWLAIPVGLIVIIDDWFIRPRRQVAASPAPPAD
Ga0075355_12065322	3300014322	Natural And Restored Wetlands	MLQTLMPLVVILSWLALPVTLICIVDDWFLRPRRALDSGPQVVRDS
Ga0137418_108657841	3300015241	Vadose Zone Soil	MFQILFNVSWLFSWLAIPVGLLVIIDDWFRRTRRQIAASPQPPVDPPLMRVAYLLLP
Ga0182749_10145745	3300017645	Compost	MLMNLVVLLSWLAIPVGLIAIVDDWFLRPRRQLAAAP
Ga0187778_103968512	3300017961	Tropical Peatland	MLQSLMPIVAVLSWLALPAALVCIVDDWFLRPRRLIAAATAPRD
Ga0187777_106741171	3300017974	Tropical Peatland	MPQSLMPIIVLLSWLALPVALVCIVDDWFLRPRRLIAAATAPRDPP
Ga0193751_12353471	3300019888	Soil	MFQIIVILSWLALPIGLLVIADDWFIRPRRQIAASPQPPADPPLMRTAY
Ga0179594_100609492	3300020170	Vadose Zone Soil	MLQTLMPLIVLLSWLALPVTLVCIVDDWLLRPRRVIASGLQTVR
Ga0210400_102566021	3300021170	Soil	MLMQIIVPLSWLALPVGLLCIVDDWFLRPRRQIAAAPQEPR
Ga0210405_105700712	3300021171	Soil	MMTSLMPFIVLLSWLALPVGVICVVDDWLLRPRRPPAAAD
Ga0213872_104280611	3300021361	Rhizosphere	MPQSLMSVIVLLSWLALPVALICIVDDWFLRPQRLIAASAPPHDAP
Ga0213876_101151141	3300021384	Plant Roots	MTMLMQLAAVLAWLALPVGLLVIGDDWFVRPGRQIAAAP
Ga0210397_104522102	3300021403	Soil	MLQTLSPLILLLSWLALPVTLVCMVDDWLLRPPGTI
Ga0210386_118177361	3300021406	Soil	MPQSLMSVIVLLSWLALPVALICIVDDWFLRPQRLIAAPAPPHDAPLMTFL
Ga0210394_110307091	3300021420	Soil	MLQTLMPIIVFLSWLALPVTLICVVDDWFLRPRRAAAVA
Ga0126371_108872771	3300021560	Tropical Forest Soil	MLQALMPTIVVLSWLALPVTILCVIDDWFLRPRRALAALSAAPGHG
Ga0213853_104970492	3300021861	Watersheds	MTNLMPLITLLAWLAVPAGLICITDDWLLRPRRAPGA
Ga0242658_11998142	3300022530	Soil	MFQIIAFLSWLALPVGLIVIADDWFIRPRRQIAASPAPPVDPPLMK
Ga0242665_100695782	3300022724	Soil	MSGTSLMPLIVVLSWLALPAGLVCVADDWLLRPRRA
Ga0242654_102219292	3300022726	Soil	MFQIIVIVSWLALPIGLLVIVDDWFIRPRRQIAASPQPPSDPP
Ga0224551_10459572	3300023259	Soil	MFMQIIVALSWLALPVGLFCMVDDWFLRPRRQLESASQP
Ga0247771_11973351	3300023267	Plant Litter	MQLVVLLSWLALPAAVLCIADDWFMRPKRQIAAAPAPARDPPLVALAYYAL
Ga0137417_142200213	3300024330	Vadose Zone Soil	LQTIELLSWLALPVGLIVIVDDWFLRSRRQIAASPA
Ga0207656_102633402	3300025321	Corn Rhizosphere	MFFQIIALLSWLAIPAGLLVIIDDWFIRPRRQIAASPAPPADPALMKML
Ga0207692_108155841	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRLIAAAAP
Ga0207710_104174682	3300025900	Switchgrass Rhizosphere	MPQLLMQIIVILSWLALPVGVLCIADDWFLRPRRQ
Ga0207684_113895952	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPQSLMSVIVLLSWLALPVALICIVDDWFLRPQRLIAAPAPPHDAPLM
Ga0207695_101540241	3300025913	Corn Rhizosphere	MFFQIIALLSWLAIPAGLLVIIDDWFIRPRRQIAASPAPPADP
Ga0207693_107677642	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRLI
Ga0207664_118601921	3300025929	Agricultural Soil	MPQMLMQIIVLLSWLALPVGVLCVVDDWFLRPRRQIAAAPQ
Ga0207711_115577241	3300025941	Switchgrass Rhizosphere	MFFQIIALLSWLAIPAGLLVIIDDWFIRPRRQIAASPAPPADPALMKTLY
Ga0207641_107594631	3300026088	Switchgrass Rhizosphere	MFQIIVILSWLALPIGLLVIADDWFIRPRRQIAASPQPPADPLLMRTAY
Ga0207675_1016485191	3300026118	Switchgrass Rhizosphere	MFFQIIALLSWLAIPAGLLVIIDDWFIRPRRQIAASPAPPADPAL
Ga0209234_12273831	3300026295	Grasslands Soil	MLQTLMPLIVLLSWLALPVTVVCIVDDWLLRPQRSIAASA
Ga0209468_10515662	3300026306	Soil	MLETLMPLIVLLSWLALPVTLICIVDDWLLRPRRVIASGRQTVPDA
Ga0208096_1016771	3300027167	Forest Soil	MPQFLMPIVIALSWLALPVTLLCVIDDWFLRPRRALT
Ga0208995_10442812	3300027388	Forest Soil	MLQTLMPFIVLLSWLALPVTLVCIVDDWLLRPRRLIAAGAQARPEAL
Ga0207506_10186891	3300027460	Soil	MLQSLMPLIILMSWLALPVTLICIVDDWFLRPRRTLAAAPGAQVVRD
Ga0207627_1031501	3300027463	Soil	MSQLMPIVVFLSWLSLPVLIVCIFDDWFLRPRRTLAAVA
Ga0209524_10264452	3300027521	Forest Soil	MLQTLMPFIVLLSWLALPVTLVCIVDDWLLRPRRVIAAGAQAGRDAP
Ga0209219_10008941	3300027565	Forest Soil	MLQTLMPLIVLLSWLALPVTLVCIVDDWLLRPRRVIATGAQAGRDAPLM
Ga0209331_11657302	3300027603	Forest Soil	MFQIIVILSWLALPVGLLVIVDDWFIRPRRQIAASPQPPADPPL
Ga0209106_10006068	3300027616	Forest Soil	MLQTLMPFIVLLSWLALPVTLVCIVDDWLLRPRRVIASGLQ
Ga0209420_12108442	3300027648	Forest Soil	MLTSLMPVIVLLSWLAVPVMLVCVVDDWFLRPQRTIAAAQ
Ga0208991_11784662	3300027681	Forest Soil	MLQTLMPLIVLLSWLALPVTLVCIVDDWLLRPRRVIASGLR
Ga0209693_102179012	3300027855	Soil	MTNLMSLLVPLAWLALPVGLICIVDDWLLRPRRAPGTPDSP
Ga0268264_100632794	3300028381	Switchgrass Rhizosphere	MFQIIVILSWLALPIGLLVIADDWFIRPRRQIAASPQPPADPLLMRTAYMLLPLFIG
Ga0265334_102384702	3300028573	Rhizosphere	MPELLMQIIKLLSWLALPVGVLCIVDDWFLRPGRQIAAAPQEARDP
Ga0302231_102159102	3300028775	Palsa	MFMQIIVALSWLALPVGLICLVDDWFLRPRRQTAALPQPSRDP
Ga0302225_101448552	3300028780	Palsa	MFMLIVVALSWLALPVGLVCLVDDWFLRPRRQIAALP
Ga0311357_109367831	3300030524	Palsa	MLMQIIVFLSWLALPVGILCVIDDWFLRPRREIAASPQP
Ga0311356_110111091	3300030617	Palsa	MLMQIISALSWLALPVGLVCLIDDWFVRPRRQISALPHAVADPPLI
Ga0311354_107291392	3300030618	Palsa	MQMLMPIAVFLSWLALPVGLLCIADDWFFRPRRQIAASP
Ga0302314_119192832	3300030906	Palsa	MQMLMPIVVFLSWLALPVGLLCIADDWFFRPRRQIAASPQ
Ga0302308_105446231	3300031027	Palsa	MFMQIIVALSWLALPVGLVCLADDWFLRPRRQIAALPQP
Ga0170820_106011811	3300031446	Forest Soil	MLQSLKPLIDLLSWLALPATLICIVDDWFLRPRRALSAPPGAQAAPD
Ga0318516_107729112	3300031543	Soil	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRLIAAAAPPQDAPFMTFLY
Ga0318541_100253074	3300031545	Soil	MPQSLVSVIVLLSWLALPVALVCIVDDWFLRPRRLIAAAAPPHDAPLMTFLY
Ga0318528_108099621	3300031561	Soil	MPQSLMSVIVVLSWLALPVAVACIVDDWFLRPRRVIAASAPPHD
Ga0310915_106070092	3300031573	Soil	MPQSLMSVIVLLSWLALPVALICIVDDWFLRPRRLIAAPVPPQDAPL
Ga0318555_106586801	3300031640	Soil	MPQSLLSVIVLLSWLALPVALVCIVDDWFLRPRRLIAAAAPPHDAPLMTFLYSA
Ga0318542_100151054	3300031668	Soil	MPQSLMSVIVLLSWLALPVALICIVDDWFLRPRRL
Ga0318542_102337462	3300031668	Soil	MPQSLVSVIVLLSWLALPVALVCIVDDWFLRPRRLIAAA
Ga0318574_104911482	3300031680	Soil	MPQSLLSVIVLLSWLALPVALVCIVDDWFLRPRRLIAAAAPPHDAP
Ga0307469_104478011	3300031720	Hardwood Forest Soil	MLQSLKPLIDLLSWLALPATLICIVDDWFLRPRRALS
Ga0307469_122337741	3300031720	Hardwood Forest Soil	MFMNFIVLLSWLAIPVGMLAVIDDWFLRPRRQLSP
Ga0318493_101046692	3300031723	Soil	MPQSLVSVIVLLSWLALPVALVCIVDDWFLRPRRLIAAAAPPQDSPLMTFLY
Ga0307468_1001057783	3300031740	Hardwood Forest Soil	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRLIAAAAPP
Ga0318494_109350631	3300031751	Soil	MSVIVVLSWLALPVAVACIVDDWFLRPRRVIAASAPPHDSPLMTF
Ga0307477_108434342	3300031753	Hardwood Forest Soil	MLQSLMPIIVLLSWLALPVTVVCVVDDWFLRPRRALSKAQPPRDAP
Ga0307475_113696341	3300031754	Hardwood Forest Soil	MFFQIIVILSWLALPVGILVIVDDWFIRPRRQIAASPQPPVD
Ga0318526_103150231	3300031769	Soil	MPQSLMSVIVMLSWLALPVALICIVDDWFLRPQRLIAA
Ga0318546_102154602	3300031771	Soil	MPQSLLSVIVLLSWLALPVALVCIVDDWFLRPRRLIAAAAPPHDAPLMTFLY
Ga0318566_100522081	3300031779	Soil	MPQSLISVIVLLSWLALPVALVCIVDDWFLRPRRLIAAAAPPH
Ga0318548_100303851	3300031793	Soil	MPQSLISVIVLLSWLALPVALVCIVDDWFLRPTCS
Ga0318576_104051142	3300031796	Soil	MSVIVLLSWLALPVALICIVDDWFLRPRRSAAAPVP
Ga0318565_100449481	3300031799	Soil	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRLIAAAAPPQDAPFM
Ga0318564_101500111	3300031831	Soil	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRLIAAAAPPQDAPFMTFLYS
Ga0318499_102902782	3300031832	Soil	MPQSLVSVIVLLSWLALPVGLVCIVDDWFLRPRRLIASP
Ga0318544_103406891	3300031880	Soil	MPQSLVSVIVLLSWLALPVALVCIVDDWFLRPRRLIAAAAPPHDAPLM
Ga0318522_101322612	3300031894	Soil	MPQSLISVIVLLSWLALPVALVCIVDDWFLRPRRLIAAAAPPHDAPLMTFLYS
Ga0318520_102421171	3300031897	Soil	MPQSLISVIVLLSWLALPVALVCIVDDWFLRPRRLIAAAAPPHDAP
Ga0310916_117165582	3300031942	Soil	MPQSLVSVIVLLSWLALPVGLVCIVDDWFLRPRRL
Ga0318562_101645681	3300032008	Soil	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRLIAAAAPPQDAPFMT
Ga0318563_100743962	3300032009	Soil	MPQSLISVIVLLSWLALPVALVCIVDDWFLRPTCSTAR
Ga0318507_101303301	3300032025	Soil	MPQSLISVIVLLSWLALPVALVCIVDDWFLRPRRLIAAAAPPHDAPLMTFLY
Ga0318556_105733922	3300032043	Soil	MPQSLISIIVLLSWLALPVALVCIVDDWFLRPRRLIAAPAPPHDAPLMTF
Ga0307470_106914132	3300032174	Hardwood Forest Soil	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRL
Ga0307471_1006949801	3300032180	Hardwood Forest Soil	MPQSLMSIIVLLSWLALPVALICIVDDWFLRPQRLIAAAAPPQD
Ga0307472_1001428252	3300032205	Hardwood Forest Soil	MPQSLMSVIVLLSWLALPVALICIVDDWFLRPQRLIAAPAPPHDAPLMTF
Ga0335078_102990093	3300032805	Soil	MLQSLMPIITLLSWLALPVSLVCIVDDWFLRPRRALSAAGAGTAAPA
Ga0299912_102316742	3300033489	Soil	MPPMLLQLIMVLSWVALPVSVICVVDDWFIRPRRQLKAAPNP
Ga0370484_0009478_1929_2054	3300034125	Untreated Peat Soil	MFMQIIVALSWLALPVALLCVVDDWFLRPRRQIAAAAQPVRD

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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