Metagenome / Metatranscriptome Family F064753

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064753
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	79 residues
Representative Sequence	MNIQQAMKNPNVVFASPEVLEASTEFTAVQKRAILVQWKDQLEKLLIADDESMLRANAKAGANADCLRRVTDILTRLSP
Number of Associated Samples	93
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.94 %
% of genes near scaffold ends (potentially truncated)	20.31 %
% of genes from short scaffolds (< 2000 bps)	78.91 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.625 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.562 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.07% β-sheet: 0.00% Coil/Unstructured: 43.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00582	Usp	8.59
PF07995	GSDH	7.03
PF07681	DoxX	6.25
PF03466	LysR_substrate	3.12
PF01564	Spermine_synth	2.34
PF02482	Ribosomal_S30AE	2.34
PF03641	Lysine_decarbox	2.34
PF01810	LysE	1.56
PF03334	PhaG_MnhG_YufB	1.56
PF02900	LigB	1.56
PF00923	TAL_FSA	1.56
PF13091	PLDc_2	1.56
PF00662	Proton_antipo_N	1.56
PF00702	Hydrolase	0.78
PF00924	MS_channel	0.78
PF03807	F420_oxidored	0.78
PF02769	AIRS_C	0.78
PF14714	KH_dom-like	0.78
PF00690	Cation_ATPase_N	0.78
PF00691	OmpA	0.78
PF02800	Gp_dh_C	0.78
PF03358	FMN_red	0.78
PF03446	NAD_binding_2	0.78
PF04191	PEMT	0.78
PF10027	DUF2269	0.78
PF02739	5_3_exonuc_N	0.78
PF03779	SPW	0.78
PF02775	TPP_enzyme_C	0.78
PF13244	MbhD	0.78
PF01145	Band_7	0.78
PF01292	Ni_hydr_CYTB	0.78
PF01329	Pterin_4a	0.78
PF13635	DUF4143	0.78
PF14760	Rnk_N	0.78
PF07586	HXXSHH	0.78
PF02627	CMD	0.78
PF00072	Response_reg	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	7.03
COG4270	Uncharacterized membrane protein	Function unknown [S]	6.25
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	6.25
COG1009	Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	Energy production and conversion [C]	3.12
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	2.34
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	2.34
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	1.56
COG1320	Multisubunit Na+/H+ antiporter, MnhG subunit	Inorganic ion transport and metabolism [P]	1.56
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.78
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.78
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.78
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.78
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.78
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.78
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.78
COG3038	Cytochrome b561	Energy production and conversion [C]	0.78
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.78
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.78
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.62 %
Unclassified	root	N/A	34.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.62 %
Unclassified	root	N/A	34.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.62 %
Unclassified	root	N/A	34.38 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.53 %
Unclassified	root	N/A	34.38 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.34 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3.12 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.34 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.78 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.34 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1.56 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.78 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	0.78 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.78 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	1.56 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.56 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.78 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	0.78 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.78 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	1.56 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.78 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.78 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.78 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	0.78 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.78 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	1.56 %
Bradyrhizobium sp. DOA9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	0.78 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.78 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.78 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.78 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	0.78 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.78 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8937226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	11106	Open in IMG/M
2140918013\|NODE_7857_length_1199_cov_8.982486	Not Available	1231	Open in IMG/M
2162886007\|SwRhRL2b_contig_2558807	All Organisms → cellular organisms → Bacteria	2514	Open in IMG/M
2228664021\|ICCgaii200_c0453052	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0509765	Not Available	512	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11104797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1724	Open in IMG/M
3300000787\|JGI11643J11755_11600186	Not Available	1340	Open in IMG/M
3300000956\|JGI10216J12902_106755329	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300000956\|JGI10216J12902_107267356	All Organisms → cellular organisms → Bacteria → Proteobacteria	4056	Open in IMG/M
3300003267\|soilL1_10013135	All Organisms → cellular organisms → Bacteria → Proteobacteria	10801	Open in IMG/M
3300003324\|soilH2_10359132	All Organisms → cellular organisms → Bacteria → Proteobacteria	3181	Open in IMG/M
3300004156\|Ga0062589_100079127	All Organisms → cellular organisms → Bacteria → Proteobacteria	1996	Open in IMG/M
3300004463\|Ga0063356_100129184	All Organisms → cellular organisms → Bacteria → Proteobacteria	2827	Open in IMG/M
3300004463\|Ga0063356_100745694	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300004463\|Ga0063356_101623684	Not Available	963	Open in IMG/M
3300004463\|Ga0063356_102727873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	760	Open in IMG/M
3300004463\|Ga0063356_105012042	Not Available	569	Open in IMG/M
3300004643\|Ga0062591_100770231	All Organisms → cellular organisms → Bacteria → Proteobacteria	882	Open in IMG/M
3300005289\|Ga0065704_10005622	All Organisms → cellular organisms → Bacteria	2818	Open in IMG/M
3300005327\|Ga0070658_10871269	Not Available	783	Open in IMG/M
3300005333\|Ga0070677_10203221	All Organisms → cellular organisms → Bacteria → Proteobacteria	957	Open in IMG/M
3300005337\|Ga0070682_100811269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	761	Open in IMG/M
3300005339\|Ga0070660_101311836	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005344\|Ga0070661_100201647	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300005345\|Ga0070692_10118850	Not Available	1471	Open in IMG/M
3300005455\|Ga0070663_101125544	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005548\|Ga0070665_100582974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1131	Open in IMG/M
3300005564\|Ga0070664_100511876	All Organisms → cellular organisms → Bacteria → Proteobacteria	1107	Open in IMG/M
3300005564\|Ga0070664_100676630	All Organisms → cellular organisms → Bacteria → Proteobacteria	960	Open in IMG/M
3300005618\|Ga0068864_102718619	Not Available	500	Open in IMG/M
3300005719\|Ga0068861_100891951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	841	Open in IMG/M
3300006092\|Ga0082021_1010377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	15850	Open in IMG/M
3300006358\|Ga0068871_101973067	Not Available	555	Open in IMG/M
3300006755\|Ga0079222_10251372	Not Available	1112	Open in IMG/M
3300006804\|Ga0079221_10433926	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300006844\|Ga0075428_100675056	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300006845\|Ga0075421_101645888	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300006846\|Ga0075430_101626058	Not Available	530	Open in IMG/M
3300006853\|Ga0075420_101175558	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300006876\|Ga0079217_11050875	Not Available	602	Open in IMG/M
3300006894\|Ga0079215_11074470	Not Available	600	Open in IMG/M
3300006953\|Ga0074063_11705599	Not Available	569	Open in IMG/M
3300007004\|Ga0079218_10371142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1203	Open in IMG/M
3300007004\|Ga0079218_12754805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	588	Open in IMG/M
3300007004\|Ga0079218_13164867	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300007281\|Ga0104349_1007597	All Organisms → cellular organisms → Bacteria → Proteobacteria	2173	Open in IMG/M
3300009094\|Ga0111539_10113406	All Organisms → cellular organisms → Bacteria	3179	Open in IMG/M
3300009156\|Ga0111538_10770889	Not Available	1218	Open in IMG/M
3300009868\|Ga0130016_10092256	All Organisms → cellular organisms → Bacteria → Proteobacteria	2985	Open in IMG/M
3300009873\|Ga0131077_10588609	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300012212\|Ga0150985_117019576	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300012469\|Ga0150984_103913203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	605	Open in IMG/M
3300012533\|Ga0138256_10737991	Not Available	765	Open in IMG/M
3300012883\|Ga0157281_1078148	Not Available	563	Open in IMG/M
3300012895\|Ga0157309_10232715	Not Available	592	Open in IMG/M
3300012907\|Ga0157283_10171621	Not Available	659	Open in IMG/M
3300012914\|Ga0157297_10151875	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300012943\|Ga0164241_10011263	All Organisms → cellular organisms → Bacteria → Proteobacteria	7533	Open in IMG/M
3300012943\|Ga0164241_10077571	All Organisms → cellular organisms → Bacteria → Proteobacteria	2397	Open in IMG/M
3300012943\|Ga0164241_10104181	All Organisms → cellular organisms → Bacteria → Proteobacteria	2036	Open in IMG/M
3300012984\|Ga0164309_11944947	Not Available	504	Open in IMG/M
3300014325\|Ga0163163_12196591	Not Available	611	Open in IMG/M
3300014325\|Ga0163163_12486080	Not Available	576	Open in IMG/M
3300014326\|Ga0157380_11173663	Not Available	810	Open in IMG/M
3300014969\|Ga0157376_10288284	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300015200\|Ga0173480_10102839	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300017792\|Ga0163161_10537675	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300017792\|Ga0163161_11579709	Not Available	578	Open in IMG/M
3300018067\|Ga0184611_1215269	Not Available	683	Open in IMG/M
3300018073\|Ga0184624_10020295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2471	Open in IMG/M
3300018422\|Ga0190265_10096947	All Organisms → cellular organisms → Bacteria → Proteobacteria	2751	Open in IMG/M
3300018422\|Ga0190265_10151081	All Organisms → cellular organisms → Bacteria → Proteobacteria	2271	Open in IMG/M
3300018465\|Ga0190269_10006000	All Organisms → cellular organisms → Bacteria → Proteobacteria	5508	Open in IMG/M
3300018465\|Ga0190269_10616628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	737	Open in IMG/M
3300018469\|Ga0190270_10451894	All Organisms → cellular organisms → Bacteria → Proteobacteria	1208	Open in IMG/M
3300018476\|Ga0190274_10110879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2212	Open in IMG/M
3300018476\|Ga0190274_10159444	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300018476\|Ga0190274_10602699	Not Available	1125	Open in IMG/M
3300018481\|Ga0190271_10005044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8645	Open in IMG/M
3300018481\|Ga0190271_10905557	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1007	Open in IMG/M
3300018481\|Ga0190271_11147059	Not Available	900	Open in IMG/M
3300018481\|Ga0190271_13636372	Not Available	516	Open in IMG/M
3300023079\|Ga0247758_1203896	Not Available	549	Open in IMG/M
3300023266\|Ga0247789_1032543	Not Available	916	Open in IMG/M
3300023269\|Ga0247773_1141300	Not Available	740	Open in IMG/M
3300023274\|Ga0247763_1077020	Not Available	927	Open in IMG/M
3300024055\|Ga0247794_10306621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	535	Open in IMG/M
3300025901\|Ga0207688_10309853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	967	Open in IMG/M
3300025920\|Ga0207649_10160367	All Organisms → cellular organisms → Bacteria → Proteobacteria	1558	Open in IMG/M
3300025923\|Ga0207681_10285877	All Organisms → cellular organisms → Bacteria → Proteobacteria	1300	Open in IMG/M
3300025925\|Ga0207650_11079813	Not Available	683	Open in IMG/M
3300025931\|Ga0207644_10991304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	705	Open in IMG/M
3300025945\|Ga0207679_10461816	All Organisms → cellular organisms → Bacteria → Proteobacteria	1128	Open in IMG/M
3300025945\|Ga0207679_10677599	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300025972\|Ga0207668_10785407	Not Available	842	Open in IMG/M
3300026067\|Ga0207678_10947245	Not Available	762	Open in IMG/M
3300027907\|Ga0207428_10018037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	6043	Open in IMG/M
3300027909\|Ga0209382_10066795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4254	Open in IMG/M
3300028379\|Ga0268266_10488725	All Organisms → cellular organisms → Bacteria → Proteobacteria	1174	Open in IMG/M
3300028786\|Ga0307517_10251960	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300031226\|Ga0307497_10121640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1047	Open in IMG/M
3300031366\|Ga0307506_10205243	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300031548\|Ga0307408_100248519	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300031548\|Ga0307408_100301582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1342	Open in IMG/M
3300031548\|Ga0307408_100705563	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300031731\|Ga0307405_10393166	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300031824\|Ga0307413_10074460	All Organisms → cellular organisms → Bacteria → Proteobacteria	2150	Open in IMG/M
3300031824\|Ga0307413_10175226	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300031824\|Ga0307413_10401074	Not Available	1074	Open in IMG/M
3300031852\|Ga0307410_10211772	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300031903\|Ga0307407_11097079	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031908\|Ga0310900_11526694	Not Available	564	Open in IMG/M
3300032013\|Ga0310906_11392593	Not Available	514	Open in IMG/M
3300032075\|Ga0310890_10814210	Not Available	740	Open in IMG/M
3300032075\|Ga0310890_11150911	Not Available	630	Open in IMG/M
3300032126\|Ga0307415_100379007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1200	Open in IMG/M
3300032126\|Ga0307415_101101515	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300032144\|Ga0315910_10000660	All Organisms → cellular organisms → Bacteria → Proteobacteria	33631	Open in IMG/M
3300032144\|Ga0315910_10001473	All Organisms → cellular organisms → Bacteria → Proteobacteria	21493	Open in IMG/M
3300032144\|Ga0315910_10003046	All Organisms → cellular organisms → Bacteria → Proteobacteria	14418	Open in IMG/M
3300032144\|Ga0315910_10360374	Not Available	1109	Open in IMG/M
3300032144\|Ga0315910_10810512	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300032144\|Ga0315910_11120451	Not Available	614	Open in IMG/M
3300032144\|Ga0315910_11272256	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300032144\|Ga0315910_11540083	Not Available	518	Open in IMG/M
3300032157\|Ga0315912_10091090	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300032157\|Ga0315912_10175543	All Organisms → cellular organisms → Bacteria → Proteobacteria	1680	Open in IMG/M
3300032157\|Ga0315912_10902151	Not Available	703	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.34%
Host-Associated	Host-Associated	43.75%
Engineered	Engineered	3.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.78%
Plants	Host-Associated → Plants	43.75%
Wastewater	Engineered → Wastewater	3.91%
Aquatic	Environmental → Aquatic	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.16%
Activated Sludge	Engineered → Wastewater → Activated Sludge	3.91%
Roots	Host-Associated → Plants → Roots	3.12%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.34%
Sediment	Environmental → Aquatic → Sediment	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.81%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	3.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.34%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Loam	Environmental → Terrestrial → Soil → Loam	1.56%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.25%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	3.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.12%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.34%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.56%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	8.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.12%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.56%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%
Wastewater Treatment Plant	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant	0.78%
Aeration Tank Of Activated Sludge Process	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Aeration Tank Of Activated Sludge Process	0.78%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006092	Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, Singapore	Engineered	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007281	Activated sludge microbial communities from bioreactor with dissolved oxygen in CSIR-NEERI, Nagpur, India ? 2ppm of oxygen, sample B	Engineered	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012533	Active sludge microbial communities from wastewater in Klosterneuburg, Austria - KNB2014incub_MG	Engineered	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300023079	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L156-409C-4	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300023269	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6	Environmental	Open in IMG/M
3300023274	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L141-409B-4	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02007500	2088090015	Soil	NVVFASPEVLEASTEFSAVQKRAILTQWKDQLEQLLIADDESMLRADAKAGANADCLRRVKNILMRLSL
Iowa-Corn-GraphCirc_00456560	2140918013	Soil	MNLQHAMKHPNALFASPEVLEASTEFSTVQKRAILIQWKDQLEKLLIADEESMLRADAKAGGNADCLQRVSNILNRLPG
SwRhRL2b_0343.00005710	2162886007	Switchgrass Rhizosphere	MDLQQAMKNPNVAFASPEVLEASAEFTPKQKRAILLQWKDQLEKLLIADEESMFRTGAIPGANAECLRRITDILTRLPG
ICCgaii200_04530521	2228664021	Soil	MNIQQAMKNPNVAFASPEILEASTEFSALQKRDILTQWKDQLEKLLIADDESMLRANAQAGANADCLRRVTDTLSRLAL
ICChiseqgaiiDRAFT_05097651	3300000033	Soil	MNIQQAMKNPNVVFASPEVLEASTEFTAVQKRAILVQWKDQLEKLLIADDESMLRANAKAGANADCLRRVTDILTRLSP*
ICChiseqgaiiFebDRAFT_111047971	3300000363	Soil	MNLQHAMKHPNALFASPEVLEASTEFSTVQKRAILIQWKDQLEKLLIADEESMLRADAKAGGNADCLQRVSNILNRLPG*
JGI11643J11755_116001861	3300000787	Soil	MKNPNVVFASPEVLEASTEFSAVQKRAILTQWKDQLEQLLIADDESMLRADAKAGANADCLRRVKNILMRLSL*
JGI10216J12902_1067553294	3300000956	Soil	MNIQNAMKDPDSVFASPEALEMSEELTTTQKRLVLVQWQDQLQKLLVADDESMTRDDAKARASPGRNGDCLRRVTDILTRLPPTSTNSCE*
JGI10216J12902_1072673562	3300000956	Soil	MNIQQAMKNPNVAFASPEILEASTEFSALQKRDILTQWKDQLEKLLIADDESMLRANAQAGANADCLRRVTNTLSRLAL*
soilL1_100131359	3300003267	Sugarcane Root And Bulk Soil	MNLQQAMKHPNALFASPEVLEASTEFSTIQKRAILTQWKDQLEKLLIADEESMLRADAKAGGNADCLQRVSNILNRLPG*
soilH2_103591321	3300003324	Sugarcane Root And Bulk Soil	MNLQQAMKHPNALFASPEVLEASTEFSTVQKRAILTQWKDQLEKLLIADEESMLRADAKAGGNADCLQRVSNILNRLPG*
Ga0062589_1000791273	3300004156	Soil	MNFQQAMKNPMGVFGTPEILEASAEFAPEEKRVILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRITNILTRMTPP*
Ga0063356_1001291844	3300004463	Arabidopsis Thaliana Rhizosphere	MNIQQAMKNPNVAFASPEILEASTEFSALQKRDILTQWKDQLEKLLIADDESMLRANAQAGANADCLRRVTDTLSRLAL*
Ga0063356_1007456941	3300004463	Arabidopsis Thaliana Rhizosphere	MNLQQAMKHPNALFASPEVLEASTEFSAVQKRAILTQWKDQLEKLLIADEESMLRADAKAGGNADCLQRVSNILNRLSG*
Ga0063356_1016236842	3300004463	Arabidopsis Thaliana Rhizosphere	MNMQQAMKNPNVVFASPEVLEASAEFTPSQKRAILLQWKDQLEKLLIADDESMLRADAKAGANAECLRRVTDMLTRLSL*
Ga0063356_1027278732	3300004463	Arabidopsis Thaliana Rhizosphere	MNLQQAMKNPNVVFASPEVLEESTEFTATQKRAILRQWKDQLEQLLIADDESMLRADAKAGANADCLRRVTDILTRLPP*
Ga0063356_1050120421	3300004463	Arabidopsis Thaliana Rhizosphere	MNIQQAMKNPNVLFASPEVLEASTEFTTVQKRAILVQWKDQLEKLLIADQENMLRADAKAGANAEC
Ga0062591_1007702312	3300004643	Soil	QQAMKNPMGVFGTPEILEASAEFAPEEKRVILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRITNILTRMTPP*
Ga0065704_100056223	3300005289	Switchgrass Rhizosphere	MDLQQAMKNPNVAFASPEVLEASAEFTPKQKRAILLQWKDQLEKLLIADEESMFRTGAIPGANAECLRRITDILTRLPG*
Ga0070658_108712692	3300005327	Corn Rhizosphere	MNMQQAMKNPNVVFASPEVLEASAEFTPLQKRAILLQWKDQLEKLLIADDESMLRADAKAGANAECLRRVTDMLTRLSL*
Ga0070677_102032213	3300005333	Miscanthus Rhizosphere	VNFQQAMKNPMSTFGTPELLEASAELDSEQKRVVLMQWKDQLEQLLTADDESMLRANAIPGANADCLRRITNVLTRLSPH*
Ga0070682_1008112692	3300005337	Corn Rhizosphere	MNLQQAMKNPNVVFASPEVLEASTEFTAPQKRAILTQWKDQLEKLLIADEESMLRAGAVAGTNADCLRRVTNVL
Ga0070660_1013118362	3300005339	Corn Rhizosphere	MNLQQAMKNPNVVFASPEVLEASTEFTAPQKRAILTQWKDQLEKLLIADEESMLRAGAVAGTNADCLRRVTNVLSRLPT*
Ga0070661_1002016472	3300005344	Corn Rhizosphere	MNLEQAMKNPNVMFASPEVLEASEEFSAPQKRAILLQWKDQLEKLLIADEEGMFRTGAVPGANADCLRRVTDIMSRLPG*
Ga0070692_101188502	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MNMQQAMKNPNVAFVSPETIASASGFSSVQKRAILTQWKDQLRQLLIADEENMPRFNANAGANAECLRRVMDAINRLSM*
Ga0070663_1011255441	3300005455	Corn Rhizosphere	MNMQQAMKNPNVAFVSPETLASASGFSSVQKRAILTQWKDQLRQLLIADEENMPRFNANAGANAECLRRVMDAINRLSM*
Ga0070665_1005829742	3300005548	Switchgrass Rhizosphere	MNLQQAMKHPNALFASPEMLEVSTEFSAAQKRAILTQWKDQLEQLLIADEESMLRANATAGGNADCLQRVSNILSRLPG*
Ga0070664_1005118761	3300005564	Corn Rhizosphere	LQQAMKNPNVVFDSPEVLEASTEFTAGQKRAILTQWKDQLEKLLIADDESMLRADAKSGANADCLRRVSNILTRLPD*
Ga0070664_1006766301	3300005564	Corn Rhizosphere	MNLQQAMKNPNVVFDSPEVLEASTEFTAVQKRAILTQWKDQLEKLLIADEESMLRADAKAGANADCLRRVNNILTRLPD*
Ga0068864_1027186191	3300005618	Switchgrass Rhizosphere	MNLQQAMKHPNALFASPEVLEASTEFSMVQKRAILTQWKDQLEKLLIADEESMLRADAKAGANADCLQRVSNILNRLPG*
Ga0068861_1008919511	3300005719	Switchgrass Rhizosphere	SKGAVIMNIQLAMKNPNVEFTSPEMLESSRQFTAMQKRAILTQWKDQLQQLLVADEESMLHAKPNTGANAECLRRVTDSMTRTAAAPEARGSCDS*
Ga0082021_10103776	3300006092	Wastewater Treatment Plant	MNSQQAMKNPAGAFDTPEVLEKAPDLSVAQKRAILMQWKDQLQQLLTADEESMLRADAKAGANAECLRRVTDILTRLPT*
Ga0068871_1019730671	3300006358	Miscanthus Rhizosphere	TMNLQQAMKHPNALFASPEVLEASTEFSMVQKRAILTQWKDQLEKLLIADEESMLRADAKAGANADCLQRVSNILNRLPG*
Ga0079222_102513722	3300006755	Agricultural Soil	MNLQQAMKNPNVVFASPEVLEASTEFTVVQKRAILTQWKDQLEKLLIADDESMLRADAKSGANADCLRRVTNILTRLPA*
Ga0079221_104339262	3300006804	Agricultural Soil	MNLEQAMKNPNVAFASPELLEASTEFDPSQKRAILMQWKDQLEKLLIADEESMLRTNARAGLNADCLRRVQDILT
Ga0075428_1006750561	3300006844	Populus Rhizosphere	MDMQQAMKDPNAMFASPEGLESSTEFTTTQKRAILVQWKDQLEKLLIADDESMLRANAQAGANADCLRRVTDIL
Ga0075421_1016458881	3300006845	Populus Rhizosphere	MNMQQAMKNPNVAFSSPEVLEASTEFTTEQKRAILTQWKDQLEKLLIADDESMLRADAKAGANADCLRRVTNILTRLQP*
Ga0075430_1016260582	3300006846	Populus Rhizosphere	MNMQLAMKNPNVVFASPEALESSQEFTTVQKRAILMQWQDQLKQLLIADEESMLHARANAGANAECLRRVTNSMTRLAP*
Ga0075420_1011755582	3300006853	Populus Rhizosphere	MNIQQAMKNPNVAFASPEILEASTEFSALQKRDILTQWKDQLEQLLIADDESMLRANAQAGANADCLRRVTDTLSRLAL*
Ga0079217_110508751	3300006876	Agricultural Soil	MNIQQAMKNPNVAFASPEMLEASTEFTASQKRDILTQWQDQLEKLLIADDESMLRADAQAGANADCLRRVTNILSRLA
Ga0079215_110744702	3300006894	Agricultural Soil	GTPEALEASTEFSTHDKCAILTQWKDQLQQFLTADDESMVRVEATAGVNADFLRRVTDTLRRLTP*
Ga0074063_117055992	3300006953	Soil	NVVFASPEVLEEATEFTATQKRAILRQWKDQLEQLLIADDESMLRTDAKAGANADCLRRVTDILTRLPP*
Ga0079218_103711421	3300007004	Agricultural Soil	MNIQQAMKNPNVAFASPEMLEASTEFTASQKRDILTQWQDQLEKLLIADDESMLRADAQAGANADCLRRVTNILSRLAL*
Ga0079218_127548051	3300007004	Agricultural Soil	MDIQQAMKNPNVVFPSPEVLEASPELTAAQKRAVLMQWKDQLQQLLIADEESMLRDGAKAGANADCLRRVTDILTRLSQ*
Ga0079218_131648672	3300007004	Agricultural Soil	MDIAKAMNNPGTVFGTPETLSASTELTAGQKRALLLQWKDQLQQLLTADDESMLATGARPGANADCLRRVTDALTRLDALESTES*
Ga0104349_10075974	3300007281	Aeration Tank Of Activated Sludge Process	MDIQQAMKNPARTFGTPEALEQATGLSDSQKRAILLQWKDQLHQLLAADDEHMLRAGAQAGANGECLRRVIDVLTRLR*
Ga0111539_101134062	3300009094	Populus Rhizosphere	MDLQQAMKNPNVVFDSPEMLEGSMEFTAVQKRAILTQWKDQLEKLLIADEESMLRADAKAGANADCLRRVTNILIRLPT*
Ga0111538_107708892	3300009156	Populus Rhizosphere	MDLQQAMKNPNVVFDSPEMLEGSMEFTAVQKRAILTQWKDQLEKLLIADDESMLRADAKAGANADCLRRVTNILIRLPT*
Ga0130016_100922563	3300009868	Wastewater	MNIQQAMKNPNAVFASPEALEASTEFTAAQKHAILMQWKDQLEKLLIADDESMLRADAKAGANADCLRRVTNILARLST*
Ga0131077_105886092	3300009873	Wastewater	MNIQQAMKNPSSVFGTPEVLEASAEFTGAEKRAILMQWKDQLLQLLVADEEGMLRFNARAGANADCLRRVTDILTRLPP*
Ga0150985_1170195762	3300012212	Avena Fatua Rhizosphere	MGHTMNLQQAMKNPNVVFASPEVLEASTELTAVQKRAILMQWKDQLEKLLIADDESMLRADANAGGNADCLRRVTNILTRLPA*
Ga0150984_1039132032	3300012469	Avena Fatua Rhizosphere	MNLQQAMKNPNVVFASPEVLEASTELTAVQKRAILMQWKDQLEKLLIADDESMLRADANAGGNADCLRRVTNILTRLPA*
Ga0138256_107379911	3300012533	Active Sludge	MNIQQAMKNPNAMFASPEVLEASTAFTAIEKRAILTQWKDQLEKLLIADEESMLRADAKAGGNADCLQRVTNILTRLPR*
Ga0157281_10781482	3300012883	Soil	MNFQQAMKNPMGVFGTPEILEASAEFAPEEKRVILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRITSILTRITPPLSEQLNGTNQA*
Ga0157309_102327152	3300012895	Soil	NFQQAMKNPMGVFGTPEILEASAEFAPEEKRVILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRITNILTRMTPP*
Ga0157283_101716213	3300012907	Soil	MNMQQAMKNPNVVFASPEVLEASAEFTPSQKRAILLQWKDQLEKLLIADDESMLRADAKAGANAECLRRVTDMLTRL
Ga0157297_101518753	3300012914	Soil	MNLQQAMKNPNVVFASPEVLEASAELTAVQKRAILTQWKDQLEKLLIADDESMLRADANAGANADCLRRVTNILTRLPE*
Ga0164241_100112636	3300012943	Soil	MNLQQAMKNPNVAFASPEVLETSTEFTAVQKRAILLQWKDQLEKLLIADEESMLRANANAGANAECLRRVSDILARIPQ*
Ga0164241_100775712	3300012943	Soil	MQMNMQQAMKNPNVEFVSPEVLEASAEFSAAQKRAILRQWKDQLEQLLVADEESMLRANANAGANAECLRRVTDSLTRLPL*
Ga0164241_101041812	3300012943	Soil	MKLQQAMKNPGLVFTSPEAVETSEEYSPSEKHAILIQWKDQLEKLLIADDESMLRADAKPGGNADCLRRISNILTRLTP*
Ga0164309_119449471	3300012984	Soil	NPMRVFGTPETLDASPDFATEEKLLILLQWKDQLQQLLTADDESMVRANAIPGANAECLRRIIDILTRLTPP*
Ga0163163_121965911	3300014325	Switchgrass Rhizosphere	MNMQQAMKNPNVVFASPEVLEASAEFTPLQKRAILLQWKDQLEKLLIADDESMLRADAKAGANAECLRRV
Ga0163163_124860801	3300014325	Switchgrass Rhizosphere	SRRSTMNLQQAMKHPNALFASPEVLEASTEFSMVQKRAILTQWKDQLEKLLIADEESMLRADAKAGANADCLQRVSNILNRLPG*
Ga0157380_111736631	3300014326	Switchgrass Rhizosphere	MNIQLAMKNPNVEFTSPEMLESSRQFTAMQKRAILTQWKDQLQQLLVADEESMLHAKPNTGANAECLRRVTDSMTRTAAAPEARGSCYS*
Ga0157376_102882843	3300014969	Miscanthus Rhizosphere	MNLQQAMKHPNALFASPEVLEASTEFSMVQKRAILTQWKDQLENLLIADEESMLRADAKAGANADCLQRVSNILNRLPG*
Ga0173480_101028393	3300015200	Soil	MNLQQAMKHPNALFASPEVLEASTEFSMVQKRAILTQWKDQLEKLLIADEESMLRADAKAGANADCLQRVSNILN
Ga0163161_105376752	3300017792	Switchgrass Rhizosphere	FGTPEILEASAEFAPEEKRVILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRITNILTRMTPP
Ga0163161_115797092	3300017792	Switchgrass Rhizosphere	MNMQQAMKNPNVVFASPEVLEASAEFTPLQKRAILLQWKDQLEKLLIADDESMLRADAKAGANAECLRRVTDMLTRLSL
Ga0184611_12152691	3300018067	Groundwater Sediment	MTFQQAMKNPMGVFGTPENLEASTDFVIEEKRLILLQWKDQLQQLLTADDESMLRANAVPGANAECLRRIINILTRLTP
Ga0184624_100202952	3300018073	Groundwater Sediment	MNFQQAMKNPMGVFGTPEILEASAEFAPEEKRVILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRITNILTRMTPP
Ga0190265_100969472	3300018422	Soil	MKLQYAMKNPNVVFVSPETLAASAEFTAEQKRAILLQWKDQLQQLLVADEESMLFVGAKPGTSAECLRRVTDTMTRLPLSGSTS
Ga0190265_101510814	3300018422	Soil	MNIQQAMKNPNVVFASPEVLEASTDFTALQKRDILTQWKDQLEKLLIADEESMLRANAEAGANADCLRRVTNILSRLTL
Ga0190269_100060008	3300018465	Soil	MLQRALKNPNDVFASPEALERSSAFTAAQKRAILMQWRDQLRQLLIADEESMLPSAPTYGANAECLSRVADSMRRLY
Ga0190269_106166282	3300018465	Soil	MKLQQALKNPNVVFASPEVLEASQDFDAAEKRAILVQWKDQLEKLLIADDESMVRADARSGANAECLRRVTDILARLQPPVRD
Ga0190270_104518942	3300018469	Soil	MDIQQAMKNPNVAFSSPELLEASMEVTGTQKRAILMQWKNQLEQLLTADEESMLRADAKAGANADCLRRITDILTRLRP
Ga0190274_101108792	3300018476	Soil	MNFQQAMKNPMGVFGTPEILEASAEFAPEEKRVILLQWKDQLHQLLTADDESMLRANAIPGANAECLRRITNILTRMTPP
Ga0190274_101594443	3300018476	Soil	MNFQQAMKNPMGVFGTPEVLEASAEFAVEEKRVILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRITTILTRLTPP
Ga0190274_106026992	3300018476	Soil	MNLQQAMKNPMGVFGTPEMLEASDEFAVEEKRVILMQWKDQLQQLLTADDESMLRANAKPGANADCLRRVTDILIRLTP
Ga0190271_100050444	3300018481	Soil	MDIQQAMKNPNVVFSSPELLEASMEVTRTQKRAILMQWKDQLEQLLTADEESMLRADAKAGANADCLRRVTDILTRLQP
Ga0190271_109055572	3300018481	Soil	MGVFGTPENLAASTDFATEEKRFILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRIIDILTRLTPP
Ga0190271_111470592	3300018481	Soil	MTFQRAMKNPMRVFGTPENLEASTDFAADEKRAILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRIINVLTRLTPP
Ga0190271_136363721	3300018481	Soil	MNLQQAMKNPMKMFGTPETLEASTDFAVDDKRAILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRIITVLTRLTPP
Ga0247758_12038962	3300023079	Plant Litter	MIIQQAMTNPAGVFGTPEMLEASPDVATAHKYAILVQWQDQLRKLLIADEESMLRAGGNAGANADCLRRVTDILTRLSA
Ga0247789_10325431	3300023266	Soil	MNFQQAMKNPMGVFGTPEILEASAEFAPEEKRVILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRITN
Ga0247773_11413002	3300023269	Plant Litter	VNFQQAMKNPMSTFGTPELLEASAELDSEQKRVVLMQWKDQLEQLLTADDESMLRANAIPGANADCLRRITNVLTRLSPH
Ga0247763_10770202	3300023274	Plant Litter	MIFQQAMTNPAGVFGTPEMLEASPDVATAHKYAILVQWQDQLRKLLIADEESMLRAGGNAGANADCLRRVTDILTRLSA
Ga0247794_103066212	3300024055	Soil	MNLQQAMKNPNVVFASPEVLEASAELTAVQKRAILTQWKDQLEKLLIADDESMLRADANAGANADCLRRVTNILTRLPE
Ga0207688_103098532	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VNFQQAMKNPMGVFGTPEILEASAEFAPEEKRVILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRITNILTRMTPP
Ga0207649_101603672	3300025920	Corn Rhizosphere	MNLEQAMKNPNVMFASPEVLEASEEFSAPQKRAILLQWKDQLEKLLIADEEGMFRTGAVPGANADCLRRVTDIMSRLPG
Ga0207681_102858771	3300025923	Switchgrass Rhizosphere	MNLQQAMKHPNALFASPEVLEASTEFSMVQKRAILTQWKDQLEKLLIADEESMLRADAKAGANADCLQRVSNILNRLPG
Ga0207650_110798131	3300025925	Switchgrass Rhizosphere	MNMQQAMKNPNVVFASPEVLEASAEFTPSQKRAILLQWKDQLEKLLIADDESMLRADAKAGANAECLRRVTDMLTRLSL
Ga0207644_109913041	3300025931	Switchgrass Rhizosphere	MNLQQAMKNPNVVFASPEVLEASTEFTAPQKRAILTQWKDQLEKLLIADEESMLRAGAVAGTNADCLRRVTNVLSRLPT
Ga0207679_104618162	3300025945	Corn Rhizosphere	MNLQQAMKNPNVVFDSPEVLEASTEFTAGQKRAILTQWKDQLEKLLIADDESMLRADAKSGANADCLRRVSNILTRLPD
Ga0207679_106775991	3300025945	Corn Rhizosphere	MNLQQAMKNPNVVFDSPEVLEASTEFTAVQKRAILTQWKDQLEKLLIADEESMLRADAKAGANADCLRRVNNILTRLPD
Ga0207668_107854072	3300025972	Switchgrass Rhizosphere	MNMQQAMKNPNVVFASPEVLEASAEFTPLQKRAILLQWKDQLEKLLIADDESMLRADAKAGANADCLRRVTDMLTRLSL
Ga0207678_109472451	3300026067	Corn Rhizosphere	MNMQQAMKNPNVAFVSPETLASASGFSSVQKRAILTQWKDQLRQLLIADEENMPRFNANAGANAECLRRVMDAINRLSM
Ga0207428_100180376	3300027907	Populus Rhizosphere	MNMQQAMKNPNVAFSSPEVLEASTEFTTEQKRAILTQWKDQLEKLLIADDESMLRADAKAGANADCLRRVTNILTRLQP
Ga0209382_100667952	3300027909	Populus Rhizosphere	MNIQQAMKNPNVVFASPEVLEASTEFTALEKRAILLQWKDQLEKLLIADEESMLRADAKIGANAECLRRVTDILTRLPS
Ga0268266_104887252	3300028379	Switchgrass Rhizosphere	MNLQQAMKHPNALFASPEMLEVSTEFSAAQKRAILTQWKDQLEQLLIADEESMLRANATAGGNADCLQRVSNILSRLPG
Ga0307517_102519602	3300028786	Ectomycorrhiza	MNLQQAMKNPNLEFASPEAIEAASEFTAVQKCAILTQWKDQLEKLLIADDESMLRTDARAGANAECLRRVTDMLRRTAGG
Ga0307497_101216402	3300031226	Soil	MNLQQAMKNPNVVFASPEVLEESTEFTATQKRAILTQWKDQLEKLLIADDESMLRTDAKAGANADCLRRVTDILTRLPP
Ga0307506_102052432	3300031366	Soil	MNLQQAMKNPNVVFASPEVLEEATEFTATQKRAILRQWKDQLEQLLIADDESMLRTDAKAGANADCLRRVTDILTRLPP
Ga0307408_1002485193	3300031548	Rhizosphere	MNLQQAMKNPMGVFGTPEVLEASEEFAVEEKRVILMQWKDQLQQLLTADDESMLRANARPGANADCLRRVTDILTRLTP
Ga0307408_1003015822	3300031548	Rhizosphere	MNLQQAMKNPNLVFASPEVLEESTDFSAAQKRAILLQWKDQLEKLLIADEESMLRADASPGMNAECLRRVTDILSRLAT
Ga0307408_1007055632	3300031548	Rhizosphere	TMNIQQAMKNPNVVFASPEVLEASTEFTAVQKRGILTQWKDQLQQLLIADEESMLRADAKAGANADCLRRVTDILTRLSL
Ga0307405_103931662	3300031731	Rhizosphere	MNLQQAMKNPMGVFGTPEVLEASEEFAVEEKRVILMQWKDQLQQLLTADDESMLRANAKPGANADCLRRVTDILTRLTP
Ga0307413_100744602	3300031824	Rhizosphere	MTNLQQAMKNPNLAFASPELLEATSEFSSAEKRAILLQWKDQLEKLLIADEESMVRADARSGANAECLRRVTNILTRLTS
Ga0307413_101752261	3300031824	Rhizosphere	MRMQEAMKNPNAVFVSPETLVSAADFSSMQKRAILAQWKDQLRQLLIADEENMQRFNASVGANAECLRRVTDAMTRLSKIA
Ga0307413_104010742	3300031824	Rhizosphere	MNFQEAKKNPMGVFGTPEALESSTEFSAEQKRVILMQWKDQLQQLLTADDESMLRHNAKAGANADCLRRITNILTRLTP
Ga0307410_102117721	3300031852	Rhizosphere	MNLQQAMKNPNLVFASPEVLEESTDFSAAQKRAILLQLKDQLEKLLIADEESMLRADASPGMNAECLRRVTDILSRLAT
Ga0307407_110970791	3300031903	Rhizosphere	ASDLHSVRPDAREAQTMNLQQAMKNPNLVFASPEVLEESTDFSAAQKRAILLQWKDQLEKLLIADEESMLRADASPGMNAECLRRVTDILSRLAT
Ga0310900_115266941	3300031908	Soil	MNLQQAMKHPNALFASPEVLEASTEFSSAQKRAILTQWKDQLEQLLIADEESMLRANATAGGNADCLQRVSNILCRLPG
Ga0310906_113925932	3300032013	Soil	NFQQAMKNPMGVFGTPEILEASAEFAPEEKRVILLQWKDQLQQLLTADDESMLRANAIPGANAECLRRITNILTRMTPP
Ga0310890_108142101	3300032075	Soil	MDMQQAMKDPNAMFASPEGLESSTEFTTTQKRAILVQWKDQLEKLLIADDESMLRANAQAGANADCLRRVTDILTRLAP
Ga0310890_111509111	3300032075	Soil	MNLQQAMKHPNALFASPEVLEASSEFSSAQKRAILTQWKDQLEKLLIADEESMLRADAKAGGNADCLQRVSNILNRLPG
Ga0307415_1003790073	3300032126	Rhizosphere	MNLQQAMKNPNVTFASPEVIEVSTEITAVQKRAILKQWKDQLEKLLIADEESMLRADATAGANADCLRRVSNVLTRLPDGEI
Ga0307415_1011015152	3300032126	Rhizosphere	MNIQQAMKNPNLAFASPEAIETSTEFSVVQKHAILLQWKDQLEKLLIADDESMLRSDAKAGANAECLRRVTDTLARLPPG
Ga0315910_100006604	3300032144	Soil	MNLQEAMKHPNVVFASPEVLETSAEFTNPEKRAILTQWKDQLEKLLIADDESMLRADAIAGTNADCLRRVTNILTRLSA
Ga0315910_1000147321	3300032144	Soil	MNLQQAMKHPNALFASPEVLEASTEFSTIQKRAILTQWKDQLEKLLIADEESMLRADAKAGGNADCLQRVSNILNRLPG
Ga0315910_100030465	3300032144	Soil	MNLQQAMKHPNALFASPEVVEASTEFTKAQKRAILTQWKDQLEKLLIADEESMLRADTNAGGNADCLQRVSNILSRLSVESGRANFGCVARDSSFG
Ga0315910_103603742	3300032144	Soil	MNLQQAMKNPNVVFASPELLEASTEFTATQKRAILTQWKDQLEQLLIADEESMLRAGAKVGANADCLRRVTDSLTRLP
Ga0315910_108105121	3300032144	Soil	MDIQQAMKNPNVVFPSPEVLEASTELTAAQKRAVLMQWKDQLQQLLIADEESMLRDGAKAGANADCLRRVTD
Ga0315910_111204511	3300032144	Soil	MNLQQAMKNPNVAFASPEVLEASTEFTPVQKRAILTQWKDQLEKLLMADEESMLRADAKSGANAECLRRVTNILSRLPR
Ga0315910_112722562	3300032144	Soil	MNLQQAMKNPNVVFASPEVVEESAEFTATQKRAILTQWKDQLEKLLIADEESMLRADAKSGANADCLRRVTDILTRLPP
Ga0315910_115400831	3300032144	Soil	MNLQQAMKHPNALFASPEVLEASSEFSSAQKRAILTQWKDQLEQLLIADEESMLRANATAGGNADCL
Ga0315912_100910901	3300032157	Soil	MNLQQAMKHPNALFASPEVLEASTEFSAVQKRAILTQWKDQLEKLLIADEESMLRADAKAGGNADCLQRVSNILNRLSG
Ga0315912_101755432	3300032157	Soil	MNLQEAMKNPNVVFDSPEVLEASTVFTAVQKRAILTQWKDQLEKLLIADEESMLRADAKSGANADCLRRVANVLTRLPG
Ga0315912_109021512	3300032157	Soil	MDIQQAMKNPNVVFPSPEVLEASTELTAAQKRAVLMQWKDQLQQLLVADEESMLRDGAKAGANADCLRRVTDILTRLSQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064753

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences