NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F064751

Metagenome / Metatranscriptome Family F064751

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F064751
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 46 residues
Representative Sequence MVIAAVPDAAPPVVRTMVVLVDVAAGVEVAVKDVTVLAMEDTVPKK
Number of Associated Samples 83
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 56.25 %
% of genes near scaffold ends (potentially truncated) 39.84 %
% of genes from short scaffolds (< 2000 bps) 99.22 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(31.250 % of family members)
Environment Ontology (ENVO) Unclassified
(53.906 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(73.438 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.11%    β-sheet: 0.00%    Coil/Unstructured: 91.89%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.17
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004788|Ga0007742_10029438Not Available500Open in IMG/M
3300004797|Ga0007764_10060415Not Available520Open in IMG/M
3300004797|Ga0007764_10060415Not Available520Open in IMG/M
3300005565|Ga0068885_1050111Not Available506Open in IMG/M
3300005662|Ga0078894_11350739Not Available597Open in IMG/M
3300006378|Ga0075498_1355722Not Available726Open in IMG/M
3300007560|Ga0102913_1299348Not Available513Open in IMG/M
3300008021|Ga0102922_1199266Not Available630Open in IMG/M
3300008107|Ga0114340_1269501Not Available507Open in IMG/M
3300008111|Ga0114344_1253006Not Available507Open in IMG/M
3300008111|Ga0114344_1254806Not Available504Open in IMG/M
3300008113|Ga0114346_1330884Not Available507Open in IMG/M
3300008113|Ga0114346_1330884Not Available507Open in IMG/M
3300008113|Ga0114346_1335096Not Available501Open in IMG/M
3300008119|Ga0114354_1287538Not Available504Open in IMG/M
3300008262|Ga0114337_1344525Not Available510Open in IMG/M
3300009161|Ga0114966_10789135Not Available513Open in IMG/M
3300009466|Ga0126448_1125388Not Available581Open in IMG/M
3300009864|Ga0132193_106987Not Available628Open in IMG/M
3300010354|Ga0129333_11668389Not Available519Open in IMG/M
3300011012|Ga0150979_1115961Not Available597Open in IMG/M
3300011012|Ga0150979_1115962Not Available732Open in IMG/M
3300011012|Ga0150979_1115963Not Available725Open in IMG/M
3300011012|Ga0150979_1115963Not Available725Open in IMG/M
3300011012|Ga0150979_1115978Not Available970Open in IMG/M
3300011012|Ga0150979_1115980Not Available1075Open in IMG/M
3300011012|Ga0150979_1115983Not Available1236Open in IMG/M
3300012471|Ga0129334_1046417Not Available569Open in IMG/M
3300012471|Ga0129334_1046417Not Available569Open in IMG/M
3300012706|Ga0157627_1203067Not Available519Open in IMG/M
3300012707|Ga0157623_1003272Not Available661Open in IMG/M
3300012707|Ga0157623_1020514Not Available513Open in IMG/M
3300012707|Ga0157623_1035013Not Available516Open in IMG/M
3300012707|Ga0157623_1075297Not Available655Open in IMG/M
3300012707|Ga0157623_1193631Not Available613Open in IMG/M
3300012712|Ga0157598_1010542Not Available513Open in IMG/M
3300012712|Ga0157598_1180943Not Available511Open in IMG/M
3300012714|Ga0157601_1216434Not Available513Open in IMG/M
3300012715|Ga0157599_1160954Not Available516Open in IMG/M
3300012717|Ga0157609_1192668Not Available519Open in IMG/M
3300012717|Ga0157609_1192668Not Available519Open in IMG/M
3300012721|Ga0157612_1001931Not Available516Open in IMG/M
3300012721|Ga0157612_1230029Not Available509Open in IMG/M
3300012722|Ga0157630_1031671Not Available516Open in IMG/M
3300012722|Ga0157630_1229126Not Available546Open in IMG/M
3300012722|Ga0157630_1243777Not Available660Open in IMG/M
3300012724|Ga0157611_1186337Not Available516Open in IMG/M
3300012729|Ga0157625_1285461Not Available501Open in IMG/M
3300012731|Ga0157616_1042850Not Available516Open in IMG/M
3300012733|Ga0157606_1399989Not Available720Open in IMG/M
3300012734|Ga0157615_1043048Not Available513Open in IMG/M
3300012757|Ga0157628_1184401Not Available747Open in IMG/M
3300012759|Ga0157626_1103121Not Available513Open in IMG/M
3300012759|Ga0157626_1103121Not Available513Open in IMG/M
3300012759|Ga0157626_1114060Not Available516Open in IMG/M
3300012759|Ga0157626_1170688Not Available565Open in IMG/M
3300012759|Ga0157626_1202809Not Available577Open in IMG/M
3300012761|Ga0138288_1033552Not Available510Open in IMG/M
3300012761|Ga0138288_1033552Not Available510Open in IMG/M
3300012769|Ga0138279_1250418Not Available670Open in IMG/M
3300012772|Ga0138287_1175868Not Available602Open in IMG/M
3300012773|Ga0138290_1239821Not Available519Open in IMG/M
3300012774|Ga0138283_1064095Not Available771Open in IMG/M
3300012774|Ga0138283_1131156Not Available519Open in IMG/M
3300012774|Ga0138283_1315680Not Available515Open in IMG/M
3300012776|Ga0138275_1252937Not Available668Open in IMG/M
3300012779|Ga0138284_1328281Not Available557Open in IMG/M
3300012962|Ga0129335_1008509Not Available660Open in IMG/M
3300012962|Ga0129335_1076629Not Available547Open in IMG/M
3300013295|Ga0170791_15813492Not Available519Open in IMG/M
3300013313|Ga0173629_10045126Not Available566Open in IMG/M
3300016681|Ga0180043_154457Not Available513Open in IMG/M
3300016681|Ga0180043_154457Not Available513Open in IMG/M
3300016699|Ga0180058_1015053Not Available639Open in IMG/M
3300016699|Ga0180058_1173090Not Available513Open in IMG/M
3300018599|Ga0188834_1000634Not Available2173Open in IMG/M
3300018599|Ga0188834_1016786Not Available761Open in IMG/M
3300018610|Ga0188884_1010964Not Available595Open in IMG/M
3300018665|Ga0188882_1018627Not Available597Open in IMG/M
3300019113|Ga0188871_1010900Not Available509Open in IMG/M
3300020179|Ga0194134_10362249Not Available548Open in IMG/M
3300020197|Ga0194128_10558854Not Available516Open in IMG/M
3300020197|Ga0194128_10558854Not Available516Open in IMG/M
3300020205|Ga0211731_10200532Not Available855Open in IMG/M
3300020205|Ga0211731_10200532Not Available855Open in IMG/M
3300020603|Ga0194126_10503194Not Available746Open in IMG/M
3300021376|Ga0194130_10672961Not Available504Open in IMG/M
3300021963|Ga0222712_10517441Not Available703Open in IMG/M
3300021963|Ga0222712_10517441Not Available703Open in IMG/M
3300024530|Ga0256322_1052776Not Available737Open in IMG/M
3300024535|Ga0255303_1015884Not Available1487Open in IMG/M
3300024548|Ga0256342_1110140Not Available614Open in IMG/M
3300024551|Ga0255302_1042558Not Available852Open in IMG/M
3300024551|Ga0255302_1107474Not Available520Open in IMG/M
3300024554|Ga0255242_1130637Not Available523Open in IMG/M
3300024564|Ga0255237_1154106Not Available519Open in IMG/M
3300024568|Ga0255238_1132265Not Available590Open in IMG/M
3300024571|Ga0256302_1165634Not Available520Open in IMG/M
3300024571|Ga0256302_1166142Not Available519Open in IMG/M
3300026410|Ga0256325_1062620Not Available513Open in IMG/M
3300026410|Ga0256325_1062620Not Available513Open in IMG/M
3300026422|Ga0255308_1043067Not Available544Open in IMG/M
3300026422|Ga0255308_1044649Not Available535Open in IMG/M
3300027764|Ga0209134_10329524Not Available517Open in IMG/M
3300027764|Ga0209134_10329524Not Available517Open in IMG/M
3300027805|Ga0209229_10529644Not Available501Open in IMG/M
3300028077|Ga0256323_1053754Not Available568Open in IMG/M
3300028096|Ga0256362_1068745Not Available550Open in IMG/M
3300028096|Ga0256362_1068745Not Available550Open in IMG/M
3300028097|Ga0255261_1077864Not Available519Open in IMG/M
3300028097|Ga0255261_1079514Not Available513Open in IMG/M
3300028097|Ga0255261_1079514Not Available513Open in IMG/M
3300028113|Ga0255234_1155993Not Available600Open in IMG/M
3300028255|Ga0255226_1055403Not Available519Open in IMG/M
3300028266|Ga0255227_1077497Not Available519Open in IMG/M
3300029699|Ga0255233_1096358Not Available587Open in IMG/M
3300029699|Ga0255233_1096358Not Available587Open in IMG/M
3300031951|Ga0315904_11329788Not Available541Open in IMG/M
3300031951|Ga0315904_11329788Not Available541Open in IMG/M
3300032092|Ga0315905_11582348Not Available510Open in IMG/M
3300033978|Ga0334977_0559741Not Available515Open in IMG/M
3300033996|Ga0334979_0517074Not Available644Open in IMG/M
3300033996|Ga0334979_0684235Not Available537Open in IMG/M
3300034023|Ga0335021_0632077Not Available528Open in IMG/M
3300034061|Ga0334987_0852211Not Available501Open in IMG/M
3300034116|Ga0335068_0561245Not Available520Open in IMG/M
3300034166|Ga0335016_0596759Not Available603Open in IMG/M
3300034200|Ga0335065_0817396Not Available520Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater31.25%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater19.53%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake9.38%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake8.59%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton6.25%
MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Marine6.25%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.91%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.91%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.34%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater2.34%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.56%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.56%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.78%
Meromictic PondEnvironmental → Aquatic → Freshwater → Pond → Unclassified → Meromictic Pond0.78%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.78%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004788Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004797Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005565Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel7S_1600h metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300006378Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007560Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02EnvironmentalOpen in IMG/M
3300008021Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008111Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008119Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NAEnvironmentalOpen in IMG/M
3300008262Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NAEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009466Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009864Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 5, surface; RNA IDBA-UDEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300011012Marine surface microbial communities from Baltic Sea. Combined Assembly of 24 SPsEnvironmentalOpen in IMG/M
3300012471Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012706Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES159 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012707Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES154 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012712Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES121 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012714Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES125 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012715Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES122 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012717Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES135 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012721Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES139 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012722Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES163 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012724Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES138 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012729Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES157 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012731Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES145 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012733Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES131 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012734Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES144 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012757Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES161 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012759Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES158 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012761Freshwater microbial communities from Lake Simoncouche, Canada - S_130826_M_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012769Freshwater microbial communities from Lake Montjoie, Canada - M_140205_X_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012772Freshwater microbial communities from Lake Simoncouche, Canada - S_130826_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012773Freshwater microbial communities from Lake Simoncouche, Canada - S_140212_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012774Freshwater microbial communities from Lake Simoncouche, Canada - S_130109_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012776Freshwater microbial communities from Lake Montjoie, Canada - M_130207_X_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012779Freshwater microbial communities from Lake Simoncouche, Canada - S_130206_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012962Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300013313Marine surface microbial communities from Baltic Sea. Combined Assembly of 24 SPs re-assemblyEnvironmentalOpen in IMG/M
3300016681Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES152 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016699Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES160 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300018599Metatranscriptome of marine microbial communities from Baltic Sea - GS675_3p0_dTEnvironmentalOpen in IMG/M
3300018610Metatranscriptome of marine microbial communities from Baltic Sea - LD35M_ls2EnvironmentalOpen in IMG/M
3300018665Metatranscriptome of marine microbial communities from Baltic Sea - LD30M_ls2EnvironmentalOpen in IMG/M
3300019113Metatranscriptome of marine microbial communities from Baltic Sea - GS845_ls3EnvironmentalOpen in IMG/M
3300020179Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0mEnvironmentalOpen in IMG/M
3300020197Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65mEnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300020603Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150mEnvironmentalOpen in IMG/M
3300021376Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surfaceEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300024530Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024535Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepC_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024548Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024551Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024554Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024564Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024568Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024571Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026410Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepC_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026422Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027764Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300028077Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepC_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028096Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028097Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028113Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028255Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028266Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029699Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300033978Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002EnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300034023Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034116Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOREnvironmentalOpen in IMG/M
3300034166Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079EnvironmentalOpen in IMG/M
3300034200Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0007742_1002943813300004788Freshwater LakeVRVMVIAAVPDAAPPVVRTMVVLADVAAALEVAVKDGTLLAMEPTVPKK*
Ga0007764_1006041513300004797Freshwater LakeMVIAAAPDAAPVVVRTMVVLVPVAAGVEVAAKFVTLLAMEDTVPTK*
Ga0007764_1006041533300004797Freshwater LakePDAAPVVVRTMVVLVPVAAGVEVAAKFVTLLAMEDTIPKK*
Ga0068885_105011123300005565Freshwater LakeMVIAEVPDATPPPVVRTMVVLVDVALPEVAVKDPTLLAMEVTDPKK*
Ga0078894_1135073923300005662Freshwater LakeMVIAAMPDATSPPVVRTMVVLVDIALPEVAVKLLTVLVMELTVPKK*
Ga0075498_135572213300006378AqueousVIAEVPVAAPAVVRTMVVLVDMAAGEEVAVKDVTPLAMEETVPKK*
Ga0102913_129934813300007560EstuarineMVIAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPKK*
Ga0102922_119926633300008021EstuarineQAPASSSRLDAAPPVVRTMLVLEASAAGVEVAVKLFTPLAMEVTVPKK*
Ga0114340_126950123300008107Freshwater, PlanktonMVIAEVPDATPPVVRTMVVLEPSAAGLEVAVKLLTVLVMEPTVPKK*
Ga0114344_125300623300008111Freshwater, PlanktonPVATPPPVVRTTVVLAAAAAGAEVAVKDTTLLAMEVTDPKK*
Ga0114344_125480623300008111Freshwater, PlanktonMVIAEVPDATPPVVRTMVVLEAPAAGLEVAVKLLTVLAMEVTDPKK*
Ga0114346_133088413300008113Freshwater, PlanktonVMVIAEVPDATPPVVRTMVVLEPSAAGLEVAVKLLTVLVMEPTVPKK*
Ga0114346_133088433300008113Freshwater, PlanktonMVIAEVPDATPPVVRTMVVLEPSAAGLEVAVKLLTVL
Ga0114346_133509623300008113Freshwater, PlanktonMVIAEVPDAAPPVVSTMVVLPDVALPEVAVKDRTLLAMELTDPKK*
Ga0114354_128753833300008119Freshwater, PlanktonMVIAEVPDATPPVVRTMVVLEASAAGLEVAVKLLTVLAMEPTVPKK*
Ga0114337_134452523300008262Freshwater, PlanktonMVIAPAPDTAPVVVRTMVVLVPVAASVEVAAKFVTPLAMEDTVPTK*
Ga0114966_1078913513300009161Freshwater LakeAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPKK*
Ga0126448_112538823300009466Meromictic PondMVIAAVPDATPPPVVRTMVVLVDVAIPDVAVKDVTVLAMELTDPKK*
Ga0132193_10698723300009864Meromictic PondMVIAVVPDATPPPVVRTMVVLVDVAVPDVAVKDVTVLAMELTDPKK*
Ga0129333_1166838923300010354Freshwater To Marine Saline GradientMVIAPAPDTAPVVVRTMVVLVPVAAGVEVAAKFVTPLAMEDTVPTK*
Ga0150979_111596123300011012MarineMVIAAVPDAAPPVVSTMVVLAAVAAGVEVAVKDVTVLAMEDTVPKK*
Ga0150979_111596213300011012MarineMVIAAVPDAAPPVVSTMVVLVAVAAGVEVAVKDETLLVMELTDPKK*
Ga0150979_111596313300011012MarineVPDAAPPVVSTMVVLVAVAAGVEVAVKDETLLVMPLTDPKK*
Ga0150979_111596323300011012MarineMVIAAVPDAAPPVVSTMVVLVAVAAGVEVAVKDETVLVMPLTDPKK*
Ga0150979_111597813300011012MarineAPSLSPVKVMVIDEVPDAAPPVVSTMVVLVAVAAGVEVAVKDVTLLLTEDTVPKK*
Ga0150979_111598033300011012MarineMVIDEVPDAAPPVVSTMVVLVAVAAGVEVAVKDVTLLLTEDTVPKK*
Ga0150979_111598323300011012MarineMVIDEVPDAAPPVVSTMVVLVAVAAGVEVAVKDVTVLAMEDTVPKK*
Ga0129334_104641713300012471AqueousMVIAEVPDAAPAVVRTMVVLVDVAAGVEVAVKDTMLLAMEATVPKK*
Ga0129334_104641733300012471AqueousMVIAEVPDAAPAVVRTMVVLVDVAEGVEVAVKDTMLLAMEAT
Ga0157627_120306713300012706FreshwaterMVIAAVPDAAPPVVRTMVVLVDVAAGVEVAVKDVTVLAMEDTVPKK*
Ga0157623_100327223300012707FreshwaterMVIAAVPEEAPPVVSSMVVLVDVAAGVEVAVKDVTVLAIEVTDPKK*
Ga0157623_102051433300012707FreshwaterMVIAEVPDAAPEVVRTMVVLVDVAAGVDVAAKDVTLLVMEATVPKK*
Ga0157623_103501323300012707FreshwaterMVIAEVPDATPPPVVRTMVVLEAPAAGLEVAVKLLTSLAMEPTVPKK*
Ga0157623_107529733300012707FreshwaterMVIAEVPDAAPPVVSTMVVLAAVAAGVEVAVKDVTLLEMEDTVPKK*
Ga0157623_119363123300012707FreshwaterMVMAAVPVAAPPVVSTIDVLVAVAAGVEEAVNVVTVLAMEDTVPKK*
Ga0157598_101054223300012712FreshwaterIAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPKK*
Ga0157598_118094313300012712FreshwaterMVIAEVPDATPPPVVRTMVVLVDVAAGVEVAVKDVTVLAMEDTVPKK*
Ga0157601_121643413300012714FreshwaterAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPKK*
Ga0157599_116095423300012715FreshwaterMVIAAVPDAAPPVVMTMVVLVDVAAGVEVAVKDVTVLAMEDTVPKK*
Ga0157609_119266813300012717FreshwaterAAVPDAAPPVVRTMVVLKAPAAGVEVAVKDVTVLVMEDTVPKK*
Ga0157609_119266823300012717FreshwaterMVIAAVPDAAPPVVRTMVVLKAPAAGVEVAVKDVTVLVMEDTV
Ga0157612_100193113300012721FreshwaterMVIAAVPDAAPPVVRTMVVLKAPAAGVEVAVKDVTVLVMEDTVPRK*
Ga0157612_123002923300012721FreshwaterMVIAALPDATPPPVVRTMVVLVDVALPEVAVKDVTVLAMELTDPKK*
Ga0157630_103167123300012722FreshwaterMVIAAVPDAAPPVVRTMVVLKAPAAGVEVAVKDVTVLAMEDTVPKK*
Ga0157630_122912623300012722FreshwaterMVIAEVPDAAPPVVSTMVVLAAVAAGVEVAVKDVTLLLTEDTVPKK*
Ga0157630_124377723300012722FreshwaterMVIVEVPDAAPEVVRTMVVLVDVAAGVDVAAKDVTLLVMEATVPKK*
Ga0157611_118633723300012724FreshwaterMVIAEVPDATPPPVVRTMAVLEASAAGLEVAVKDVTLLAMEPTVPKK*
Ga0157625_128546113300012729FreshwaterMVIAEVPDATPPPVVRTMVVLVDVALPEVAVKDVTVLAMELTDPKK*
Ga0157616_104285023300012731FreshwaterMVIAEVPDATPPPVVRTMVVLEAPAAGLEVAVKDVTLLAMEPTVPKK*
Ga0157606_139998923300012733FreshwaterMVIAEVPDATPPPVVRTMAVLEAPAAGLEVAVKDVTLLAMEPTVPKK*
Ga0157615_104304813300012734FreshwaterMETAAVAVAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPKK*
Ga0157628_118440123300012757FreshwaterMVIAAVPEEAPPVVSTMVVLVDVAAGVEVAVKDVTVLAIEVTDPKK*
Ga0157626_110312113300012759FreshwaterVRVMVIAAVPDAAPPVVRTMLVLEASAAGVEVAVKLFTPLAMEVTVPKK*
Ga0157626_110312123300012759FreshwaterMVIAAVPDAAPPVVRTMLVLEASAAGVEVAVKLFTPLA
Ga0157626_111406033300012759FreshwaterALPVTAPPVVSTMEVLVAVAAVVEAAVKDVTLLLTEDTVPKK*
Ga0157626_117068813300012759FreshwaterMVIAALPDATPPPVVRTMVVLADVALPEVAVKDVTVLAMEVTDPKK*
Ga0157626_120280923300012759FreshwaterMVIAEVPDATPPVVRTMVVLEAPAAGLEVAVKLLTVLAMEPTVPKK*
Ga0138288_103355213300012761Freshwater LakeVAAPPVVRTMVVLVAVAAGVEVAVKLPTPLAIDVTDPRK*
Ga0138288_103355223300012761Freshwater LakeMVMGEVPVAAPPVVRTMVVLVAVAAGVEVAVKLPTPLAIDVTDPRK*
Ga0138279_125041823300012769Freshwater LakeMVIAAVPDGAPPVVRTMVVLTDVAAGVEVAVKSAMLLVIEATDPKK*
Ga0138287_117586823300012772Freshwater LakePSVSPVRVIVTAAVPVATPPPVVRTTVVLAAAAAGAEVAVKDTTLLAMEVTDPKK*
Ga0138290_123982113300012773Freshwater LakeRPVRVMVIAAVPDGTPPPVVSTMVVLADVASPEVAVKDVTVLAMEETVPKK*
Ga0138283_106409513300012774Freshwater LakeMVIAAVPDTAPPVVRTMAVLVDVAVPEVAVKDPTPLAMELTDPKK*
Ga0138283_113115613300012774Freshwater LakeMVIAAVPDGTPPPVVSTMVVLADVASTEVAVKDVTVLAMEETVPKK*
Ga0138283_131568013300012774Freshwater LakeMVIAAVPDAAPPVVRTRVVLVDVTVAEVAVKAVTGLLAMEVTDPKK*
Ga0138275_125293733300012776Freshwater LakeGGMVRVMVIAVVPDATPPPVVRTMVVLVDVAVPEVAVKDVTPLAMELTDPKK*
Ga0138284_132828113300012779Freshwater LakeMVIAAVPDAAPAVVRTRAVLVAVTAAEVAVKLATLLAMEVTVPKK*
Ga0129335_100850913300012962AqueousMVIAAVPDAAPPVVSTMVVLVDVAAGVEVAVKDPTVLAMELTDPKK*
Ga0129335_107662913300012962AqueousMVIAEVPDSTPLPVVRTMVVLEAPAAGLEVAVKLFTVLAMEPTVPKK*
Ga0170791_1581349213300013295FreshwaterMVIAAVPDGTPPPVVSTMVVLADVAAPEVAVKDVTVLAMEETVPKK*
Ga0173629_1004512633300013313MarineAPSLSPVKVMVIDEVPDAAPPVVSTMVVLVAVAAGVEVAVKDETLLVMELTDPKK*
Ga0180043_15445713300016681FreshwaterMVIAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPK
Ga0180043_15445723300016681FreshwaterAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPKK
Ga0180058_101505323300016699FreshwaterMVIAALPVTAPPVVSTMEVLVAVAAVVEAAVKDVTLLEMEDTVPKK
Ga0180058_117309023300016699FreshwaterMVIAEVPDAAPEVVRTMVVLVDVAAGVDVAAKDVTLLVMEATVPKK
Ga0188834_100063423300018599Freshwater LakeMVIDEVPDAAPPVVSTMVVLAAVAAGVEVAVKDVTLLLTEDTVPKK
Ga0188834_101678623300018599Freshwater LakeMVIAALPDTAPPVVRTMVVLEDVAAGVEVAVKDVTVLAMEDTDPKK
Ga0188884_101096423300018610Freshwater LakeMVIDEVPDAAPPVVSTMVVLVAVAAGVEVAVKDVTLLLTEDTVPKK
Ga0188882_101862723300018665Freshwater LakeMVIAALPVTAPPVVSTMEVLVAVAAGVEVAVKDVMLLEMEDTVPKK
Ga0188871_101090023300019113Freshwater LakeMVIAAVPDATPPPVVRTMVVLVDVAVPDVAVKDVTVLAMELTDPKK
Ga0194134_1036224923300020179Freshwater LakeMVIAEVPDATPPVVRTMVVLEAPAAGLEVAVKLLTVLAMEVTDPKK
Ga0194128_1055885413300020197Freshwater LakeMVIAPAPDTAPVVVRTMVVLVPVAAGVEVAAKFVTPLAMED
Ga0194128_1055885433300020197Freshwater LakeIAEVPDAAPVVVRTMVVLVPVAAGVEVAAKFVTPLAMEDTVPKK
Ga0211731_1020053223300020205FreshwaterMVIAEVPDATPPVVRTMLVLEPSAAGLEAAVKLLTVLVMEPTVPKK
Ga0211731_1020053243300020205FreshwaterMVIAEVPDATPPVVRTMVVLVDVALPEVAVKDGTLLAMELTDPKK
Ga0194126_1050319443300020603Freshwater LakeSPVRVMVIAEVPDATPPVVRTMVVLVDVALPEVAVKDGTLLAMEVTDPKK
Ga0194130_1067296113300021376Freshwater LakeIAEVPDATPPVVRTMVVLEAPAAGLEVAVKLLTVLAMEVTDPKK
Ga0222712_1051744113300021963Estuarine WaterEVPDATPPVVRTMVVLEAPAAGLEVAVKLLTVLAMEVTDPKK
Ga0222712_1051744133300021963Estuarine WaterMVIAEVPDATPPVVRTMVVLVDVALPEVAVKDGTLLAMEVTDPKK
Ga0256322_105277623300024530FreshwaterVSPVSVMVIATVPDAAPPVVRTIVVFAEVTLPEVAVNDVTPLAMEVTDPKK
Ga0255303_101588433300024535FreshwaterMVIGEMPDTTPPVVSTIMVLKAVAAGVEVAVKDPTVLVMEETDPKK
Ga0256342_111014023300024548FreshwaterMIICALPDAAPVVVRTMVVLVLVAAPEVAAKDETVLAMEDTVPTK
Ga0255302_104255823300024551FreshwaterMVIAEVPDTAPAVVRTMVVLAAVAAGVEVAVKDVTVLAMEDTVPKK
Ga0255302_110747423300024551FreshwaterMVIAAIPVTAPPVVRTMVVLEDVAAGLEVAVKDGTVLAMEDTVPKK
Ga0255242_113063723300024554FreshwaterVKVMVIWVIPVPTPPPVVRTMVVLCGVAEPEVAVKEGTVLAMELTDPKK
Ga0255237_115410613300024564FreshwaterAVPVATPPPVVRTTVVLAAAAAGAEVAVKDTTLLAMEVTDPKK
Ga0255238_113226523300024568FreshwaterCAAPRVNPVRVMVIAAVPDAAPPVVRTMVVLVDVAAGEEVAVKDVTPLAMELTVPKK
Ga0256302_116563433300024571FreshwaterCEVPVAAPPVVRTMVVLVAVAAGVEVAVKPLTPLAIDVTDPRK
Ga0256302_116614223300024571FreshwaterMVIAEVPDAAPVVVRTMVVLVPVAAGVEVAAKFVTPLAMEDTVPTK
Ga0256325_106262013300026410FreshwaterMVIAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVT
Ga0256325_106262023300026410FreshwaterVIAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPKK
Ga0255308_104306723300026422FreshwaterMVAAAVPEAAPAVVRTVVLLEDAAGVEVAVKDVTVLAMELTDPKK
Ga0255308_104464923300026422FreshwaterVSPVSVMVIAAVPDAAPPVVRTIVVFAEVTLPEVAVNDVTPLAMEVTDPKK
Ga0209134_1032952413300027764Freshwater LakeMVIAPAPDTAPVVVRTMVVLVPVAAGVEVAAKFVTPLA
Ga0209134_1032952433300027764Freshwater LakeRVMVIAPAPDTAPVVVRTMVVLVPVAAGVEVAAKFVTPLAMEDTVPTK
Ga0209229_1052964413300027805Freshwater And SedimentMVIAPAPDTAPVVVRTMVVLVPVAASVEVAAKFVTPLAMEDTVP
Ga0256323_105375423300028077FreshwaterMVIAAVPVATPPPVVRTIEVFVAIAGVEVAVRDVTVLAMEVTDPKK
Ga0256362_106874513300028096FreshwaterMVIAEVPDTAPAVVRTMVVLVAVAAGVEVAVKDVTVLAMEDTVPKK
Ga0256362_106874533300028096FreshwaterVIAEVPDTAPAVVRTMVVLVAVAAGVEVAVKDVTVLAMEDTVPKK
Ga0255261_107786423300028097FreshwaterAAVPVATPPPVVRTTVVLAAAAAGAEVAVKDTTLLAMEVTDPKK
Ga0255261_107951413300028097FreshwaterAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPKK
Ga0255261_107951423300028097FreshwaterMVIAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVP
Ga0255234_115599323300028113FreshwaterMVIAAVPDAAPAVVRTIEVFVAIAGVEVAVKDVTVLVMELTDPKK
Ga0255226_105540323300028255FreshwaterMVIAPAPDTAPVVVRTMVVLVPVAAGVEVAAKFVTPLATEDTVPTK
Ga0255227_107749723300028266FreshwaterMVIAPAPDTAPVVVRTMVVLVPVAAGVEVAAKFVTPLAMEDTVPTK
Ga0255233_109635813300029699FreshwaterMVIAEVPDATPPVVSTMVVLVDVALPEVAVKAGTLLALELTDPKK
Ga0255233_109635833300029699FreshwaterWVSPVRVMVIAEVPDATPPVVRTMVVLEAPAAGLEVAVKLLTVLAMEVTDPKK
Ga0315904_1132978813300031951FreshwaterMVIAEMPDSTPLPVVRTMVVLEAPAAALEVAVKLFTVLAMEPTVPKK
Ga0315904_1132978833300031951FreshwaterVMVIAEVPDSTPLPVVRTMVVLEAPAAALEVAVKLFTVLAMEPTVPKK
Ga0315905_1158234813300032092FreshwaterMVIAEVPDATPPVVRTMVVLEAPAAGLEVAVKLLTVLAM
Ga0334977_0559741_232_3723300033978FreshwaterMVIAAVPDAAPPVVRTMLVLEASAAGVEVAVKLFTPLAMEVTVPKK
Ga0334979_0517074_277_4173300033996FreshwaterMVIAAVPDAAPPVVRTMLVLEAFAAGVEVAVKLFTPLAMEVTVPKK
Ga0334979_0684235_274_4173300033996FreshwaterMVIAEVPDATPPPVVRTMVVLEAPAAGLEVAVKLLTSLAMEPTVPKK
Ga0335021_0632077_225_3623300034023FreshwaterMVIAEVPDAAPPVVSTMVVLADVALPEVAVKDVTVLAMELTDPKK
Ga0334987_0852211_219_3593300034061FreshwaterMVIAAVPDATPPPVVRTMAVLVDVAIPDVAVKDVTVLAMELTDPKK
Ga0335068_0561245_231_3743300034116FreshwaterMVIAEVPDSTPLPVVRTMVVLEAPAAGLEVAVKLFTVLAMESTVPKK
Ga0335016_0596759_185_3253300034166FreshwaterMVIAEVPDATPPVVRTMVVLEAPAAGLEVAVKLLTVLAMEPTVPKK
Ga0335065_0817396_144_2843300034200FreshwaterMVIAEVPDATPPVVRTMVVLEPSAAGLEVAVKLLTVLVMEPTVPKK


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