NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F064552

Metagenome Family F064552

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F064552
Family Type Metagenome
Number of Sequences 128
Average Sequence Length 66 residues
Representative Sequence MSKLPLNSIRRFVNNGRVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGWWDDDGASGKPRI
Number of Associated Samples 114
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 50.78 %
% of genes near scaffold ends (potentially truncated) 99.22 %
% of genes from short scaffolds (< 2000 bps) 96.09 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.094 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.281 % of family members)
Environment Ontology (ENVO) Unclassified
(35.938 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.094 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 30.85%    β-sheet: 0.00%    Coil/Unstructured: 69.15%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF060523-HAO 85.16
PF04909Amidohydro_2 5.47
PF14366DUF4410 0.78
PF03301Trp_dioxygenase 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG3483Tryptophan 2,3-dioxygenase (vermilion)Amino acid transport and metabolism [E] 0.78

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.09 %
UnclassifiedrootN/A3.91 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459010|GIO7OMY02JI6CLAll Organisms → cellular organisms → Bacteria → PVC group508Open in IMG/M
2209111022|2221210440All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10154194All Organisms → cellular organisms → Bacteria → PVC group551Open in IMG/M
3300000837|AP72_2010_repI_A100DRAFT_1047274Not Available607Open in IMG/M
3300000955|JGI1027J12803_102095536All Organisms → cellular organisms → Bacteria → PVC group552Open in IMG/M
3300000955|JGI1027J12803_103089658All Organisms → cellular organisms → Bacteria → PVC group564Open in IMG/M
3300004114|Ga0062593_100261183All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300005167|Ga0066672_10479331All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia810Open in IMG/M
3300005180|Ga0066685_10610407All Organisms → cellular organisms → Bacteria → PVC group751Open in IMG/M
3300005294|Ga0065705_10838484All Organisms → cellular organisms → Bacteria → PVC group596Open in IMG/M
3300005338|Ga0068868_101044654All Organisms → cellular organisms → Bacteria → PVC group749Open in IMG/M
3300005367|Ga0070667_102317988All Organisms → cellular organisms → Bacteria → PVC group506Open in IMG/M
3300005436|Ga0070713_101514781All Organisms → cellular organisms → Bacteria → PVC group651Open in IMG/M
3300005439|Ga0070711_101497003All Organisms → cellular organisms → Bacteria → PVC group589Open in IMG/M
3300005445|Ga0070708_100618632All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1021Open in IMG/M
3300005450|Ga0066682_10477370All Organisms → cellular organisms → Bacteria → Proteobacteria791Open in IMG/M
3300005459|Ga0068867_101790229All Organisms → cellular organisms → Bacteria → PVC group577Open in IMG/M
3300005558|Ga0066698_10935952All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300005559|Ga0066700_11032213All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia540Open in IMG/M
3300005578|Ga0068854_102229097All Organisms → cellular organisms → Bacteria → PVC group507Open in IMG/M
3300005616|Ga0068852_101275694All Organisms → cellular organisms → Bacteria → PVC group756Open in IMG/M
3300005764|Ga0066903_100004936All Organisms → cellular organisms → Bacteria11436Open in IMG/M
3300005764|Ga0066903_100258580All Organisms → cellular organisms → Bacteria2698Open in IMG/M
3300005764|Ga0066903_100734863All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1749Open in IMG/M
3300005764|Ga0066903_105628241All Organisms → cellular organisms → Bacteria → PVC group659Open in IMG/M
3300005764|Ga0066903_107260145All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300006796|Ga0066665_10642153All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300006844|Ga0075428_102516735All Organisms → cellular organisms → Bacteria → PVC group527Open in IMG/M
3300009036|Ga0105244_10487596All Organisms → cellular organisms → Bacteria → PVC group567Open in IMG/M
3300009098|Ga0105245_10741366All Organisms → cellular organisms → Bacteria → PVC group1018Open in IMG/M
3300009137|Ga0066709_101171743All Organisms → cellular organisms → Bacteria → PVC group1131Open in IMG/M
3300009148|Ga0105243_10745485All Organisms → cellular organisms → Bacteria → PVC group960Open in IMG/M
3300009156|Ga0111538_13815892All Organisms → cellular organisms → Bacteria → PVC group521Open in IMG/M
3300009162|Ga0075423_11827132All Organisms → cellular organisms → Bacteria → PVC group656Open in IMG/M
3300009792|Ga0126374_10438236All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300010043|Ga0126380_10436828All Organisms → cellular organisms → Bacteria → PVC group985Open in IMG/M
3300010320|Ga0134109_10220778All Organisms → cellular organisms → Bacteria → PVC group706Open in IMG/M
3300010335|Ga0134063_10482937All Organisms → cellular organisms → Bacteria → PVC group618Open in IMG/M
3300010361|Ga0126378_10754212All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1084Open in IMG/M
3300010362|Ga0126377_11141870All Organisms → cellular organisms → Bacteria → PVC group848Open in IMG/M
3300010376|Ga0126381_101789703All Organisms → cellular organisms → Bacteria → PVC group887Open in IMG/M
3300010376|Ga0126381_103826451All Organisms → cellular organisms → Bacteria → PVC group588Open in IMG/M
3300010376|Ga0126381_104079715All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300010376|Ga0126381_104852949Not Available517Open in IMG/M
3300011270|Ga0137391_11436242All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300012198|Ga0137364_10593737All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300012202|Ga0137363_11217833All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia640Open in IMG/M
3300012206|Ga0137380_10867192All Organisms → cellular organisms → Bacteria → PVC group777Open in IMG/M
3300012208|Ga0137376_11072623All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia689Open in IMG/M
3300012350|Ga0137372_10451303All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300012360|Ga0137375_11350543All Organisms → cellular organisms → Bacteria → PVC group534Open in IMG/M
3300012517|Ga0157354_1006520All Organisms → cellular organisms → Bacteria → PVC group1057Open in IMG/M
3300012683|Ga0137398_10563978All Organisms → cellular organisms → Bacteria → PVC group786Open in IMG/M
3300012896|Ga0157303_10028214All Organisms → cellular organisms → Bacteria → PVC group1010Open in IMG/M
3300012915|Ga0157302_10019190All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1708Open in IMG/M
3300012930|Ga0137407_10565632All Organisms → cellular organisms → Bacteria → PVC group1065Open in IMG/M
3300012948|Ga0126375_11919460All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia521Open in IMG/M
3300012957|Ga0164303_11436566All Organisms → cellular organisms → Bacteria → PVC group518Open in IMG/M
3300012960|Ga0164301_10555625All Organisms → cellular organisms → Bacteria → PVC group839Open in IMG/M
3300012961|Ga0164302_11422309All Organisms → cellular organisms → Bacteria → PVC group567Open in IMG/M
3300012987|Ga0164307_11057532All Organisms → cellular organisms → Bacteria → PVC group664Open in IMG/M
3300012989|Ga0164305_10542288All Organisms → cellular organisms → Bacteria → PVC group924Open in IMG/M
3300012989|Ga0164305_10895695All Organisms → cellular organisms → Bacteria → PVC group745Open in IMG/M
3300013104|Ga0157370_10419748All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1231Open in IMG/M
3300013297|Ga0157378_10434510All Organisms → cellular organisms → Bacteria → PVC group1300Open in IMG/M
3300013306|Ga0163162_10134073All Organisms → cellular organisms → Bacteria2587Open in IMG/M
3300013306|Ga0163162_12987541All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300013503|Ga0120127_10105733All Organisms → cellular organisms → Bacteria → PVC group635Open in IMG/M
3300014150|Ga0134081_10060577All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1143Open in IMG/M
3300014157|Ga0134078_10579721All Organisms → cellular organisms → Bacteria → PVC group534Open in IMG/M
3300014969|Ga0157376_13002553All Organisms → cellular organisms → Bacteria → PVC group511Open in IMG/M
3300015372|Ga0132256_101203587All Organisms → cellular organisms → Bacteria → PVC group871Open in IMG/M
3300015372|Ga0132256_103899353Not Available502Open in IMG/M
3300015374|Ga0132255_103967129All Organisms → cellular organisms → Bacteria → PVC group628Open in IMG/M
3300016319|Ga0182033_11552592All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300016387|Ga0182040_11773807All Organisms → cellular organisms → Bacteria → PVC group528Open in IMG/M
3300016445|Ga0182038_11831098All Organisms → cellular organisms → Bacteria → PVC group548Open in IMG/M
3300018000|Ga0184604_10021142All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1542Open in IMG/M
3300018054|Ga0184621_10095953All Organisms → cellular organisms → Bacteria → PVC group1045Open in IMG/M
3300018056|Ga0184623_10448479All Organisms → cellular organisms → Bacteria → PVC group559Open in IMG/M
3300018066|Ga0184617_1132259All Organisms → cellular organisms → Bacteria → PVC group720Open in IMG/M
3300019872|Ga0193754_1005528All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1251Open in IMG/M
3300019879|Ga0193723_1080275All Organisms → cellular organisms → Bacteria → PVC group935Open in IMG/M
3300019882|Ga0193713_1060762All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300019997|Ga0193711_1013737All Organisms → cellular organisms → Bacteria → PVC group1019Open in IMG/M
3300020006|Ga0193735_1088068All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300020006|Ga0193735_1141807All Organisms → cellular organisms → Bacteria → PVC group633Open in IMG/M
3300020008|Ga0193757_1025611All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300021073|Ga0210378_10186178All Organisms → cellular organisms → Bacteria → PVC group796Open in IMG/M
3300021344|Ga0193719_10365640All Organisms → cellular organisms → Bacteria → PVC group598Open in IMG/M
3300021560|Ga0126371_12175352All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300022534|Ga0224452_1149081All Organisms → cellular organisms → Bacteria → PVC group720Open in IMG/M
3300022756|Ga0222622_10566554All Organisms → cellular organisms → Bacteria → PVC group817Open in IMG/M
3300025315|Ga0207697_10365848All Organisms → cellular organisms → Bacteria → PVC group640Open in IMG/M
3300025900|Ga0207710_10072612All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1581Open in IMG/M
3300025905|Ga0207685_10476411All Organisms → cellular organisms → Bacteria → PVC group653Open in IMG/M
3300025914|Ga0207671_10350465All Organisms → cellular organisms → Bacteria → PVC group1171Open in IMG/M
3300025915|Ga0207693_10460370All Organisms → cellular organisms → Bacteria → PVC group994Open in IMG/M
3300025919|Ga0207657_10354483All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1157Open in IMG/M
3300025920|Ga0207649_10286687All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1199Open in IMG/M
3300025927|Ga0207687_11018862All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300025933|Ga0207706_10155143All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales2014Open in IMG/M
3300025940|Ga0207691_10422731All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1135Open in IMG/M
3300025945|Ga0207679_10703325All Organisms → cellular organisms → Bacteria → PVC group917Open in IMG/M
3300025986|Ga0207658_10791197All Organisms → cellular organisms → Bacteria → PVC group861Open in IMG/M
3300026023|Ga0207677_10860242All Organisms → cellular organisms → Bacteria → PVC group815Open in IMG/M
3300026088|Ga0207641_11617204All Organisms → cellular organisms → Bacteria → PVC group650Open in IMG/M
3300026095|Ga0207676_10964903All Organisms → cellular organisms → Bacteria → PVC group839Open in IMG/M
3300026142|Ga0207698_11106754All Organisms → cellular organisms → Bacteria → PVC group805Open in IMG/M
3300026316|Ga0209155_1143897All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300026498|Ga0257156_1070324All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia725Open in IMG/M
3300026550|Ga0209474_10369086All Organisms → cellular organisms → Bacteria → PVC group781Open in IMG/M
3300026944|Ga0207570_1008159All Organisms → cellular organisms → Bacteria → PVC group737Open in IMG/M
3300027433|Ga0207618_101604All Organisms → cellular organisms → Bacteria → PVC group559Open in IMG/M
3300027502|Ga0209622_1006355All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1914Open in IMG/M
3300027821|Ga0209811_10029749All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1816Open in IMG/M
3300028885|Ga0307304_10602257All Organisms → cellular organisms → Bacteria → PVC group509Open in IMG/M
3300031720|Ga0307469_12016154All Organisms → cellular organisms → Bacteria → PVC group560Open in IMG/M
3300031720|Ga0307469_12166543All Organisms → cellular organisms → Bacteria → PVC group541Open in IMG/M
3300031740|Ga0307468_102010836All Organisms → cellular organisms → Bacteria → PVC group554Open in IMG/M
3300031744|Ga0306918_10097517All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales2085Open in IMG/M
3300031820|Ga0307473_11441995All Organisms → cellular organisms → Bacteria → PVC group520Open in IMG/M
3300031833|Ga0310917_10265473All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales1157Open in IMG/M
3300031890|Ga0306925_11759772All Organisms → cellular organisms → Bacteria → PVC group595Open in IMG/M
3300031912|Ga0306921_10848006All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300031912|Ga0306921_12173860Not Available586Open in IMG/M
3300031954|Ga0306926_12236494Not Available608Open in IMG/M
3300032001|Ga0306922_11949726All Organisms → cellular organisms → Bacteria → PVC group574Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.28%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.81%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.03%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.91%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.91%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.12%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.12%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.12%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.34%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.34%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.34%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.34%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.56%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.56%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.56%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.78%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.78%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.78%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.78%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.78%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.78%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.78%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.78%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
2209111022Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichmentEnvironmentalOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000837Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012517Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610EnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300019872Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020008Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026944Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027433Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3w-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027502Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_008869802170459010Grass SoilMSKLPLNSIRRFVNNARVLRIAGPLLAALIISSCEEYPTPYQPGLYPRAAPAGFWN
22220485912209111022Grass SoilMSKLPLNSIRRFVNNDRVLRIAGTLLAALIICSCEEYPTPYQPGLYPRAAPAGWWDDDGASGKPRIVVH
AF_2010_repII_A1DRAFT_1015419413300000597Forest SoilMSNDPLNSIRRXVNNGPLARITGALLAALIISSCEEYPTAYQPGMYPRATPAGWWDDEGASGK
AP72_2010_repI_A100DRAFT_104727423300000837Forest SoilMLLRTNLAPDTMRRFVNRGRVFEIAGTLLAVLIVCSCEEYPTPNQPGLYPRAMPAGWWNSEGASGNARTTMSDAPKD*
JGI1027J12803_10209553613300000955SoilMNSIRRSVNNGRVLRIAGTLLAAVIISSCEEYPAPYEPGLYPRAVPAGWWDDEGASGKPRIVVH
JGI1027J12803_10308965813300000955SoilNSIRRFVNNGRVLRIAGTLLAAVIICSCEEYPTPYEPGLYPRAVPAGWWDDEGASGKPRIVVHIGEQ
Ga0062593_10026118333300004114SoilMRNLPLNSIRRFVNNAPLLRITGALLAALIICSCEEYPTPYQPGLYPRAAPAGWWNDEGAGGKPRIVVHIGEQK
Ga0066672_1047933123300005167SoilMLPLNTIRPFVNNGQLLKIAGTLLAALLICSCEEYPPYEPGLYPRATPAGWWNDEDASGSAKIVVHIGEQKA
Ga0066685_1061040723300005180SoilMSKLPLNSIRRFVNNGRVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGWWDDDGASGKPRI
Ga0065705_1083848413300005294Switchgrass RhizosphereMRNVPLNSIRRFVNNGRILRIAGALLASLIICSCEEYPEPYATGPGFYPRAAPAGWWHDDGVSGKPRIVVRI
Ga0068868_10104465423300005338Miscanthus RhizosphereMRNLPLNSIRPFVNTGPLLKITGALLAALIICSCEEYPTPYQPGVYPRAAAAGWWNDEG
Ga0070667_10231798823300005367Switchgrass RhizosphereMRRLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYAAGAGFYPRPAPAGWWHDEGASGKPRIVVRIG
Ga0070713_10151478123300005436Corn, Switchgrass And Miscanthus RhizosphereMRRLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYAAGAGFYPRPAPAGWWHDEGAS
Ga0070711_10149700313300005439Corn, Switchgrass And Miscanthus RhizosphereMRNLPLNSIRPFVNTGRILRIAGMLLAAVIICSCEEYPEPYARNGGMFPRAAPIGWWH
Ga0070708_10061863213300005445Corn, Switchgrass And Miscanthus RhizosphereMRQVSLNSIRRSVKNARLLQIAGTLLAALIICSCEEYPPYELGLFPRAAPVGWWNDEAASGSPRIVVHIGEQQAYF
Ga0066682_1047737023300005450SoilMLPLNTIRPFVNNGQLLKIAGTLLAALIICSCEEYPPYEPGLYPRATPAGWWNDEDASGSAKIVVHIGEQKAYFYKD
Ga0068867_10179022923300005459Miscanthus RhizosphereMRTLPLNSIRRFVNAGRILRIAGTLLAALIICSCEEYPEPYARPGGLFPRAAPIGWWHEEGASGSPRIVVHIGE
Ga0066698_1093595213300005558SoilMSNLPSNSIRHFVKNGRLLKIAGTLLAALTVCSCEEYPPPYEPGFYPRATPAGWWNDDGASGSAKIVVHIGEQKAYFYK
Ga0066700_1103221323300005559SoilMLPLNTIRPFVNNGQLLKIAGTLLAALLICSCEEYPPYEPGLYPRATPAGWW
Ga0068854_10222909723300005578Corn RhizosphereMRRLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYAAGAGFYPRPAPAGWWHDEGASGKPRIVVRIGE
Ga0068852_10127569413300005616Corn RhizosphereMSKLPVNSIRRFVNNVPLVRIAVTLLAALIICSCEEYPQPYSPTGFYPRAAPAGWWNDNGVS
Ga0066903_100004936143300005764Tropical Forest SoilMSKLQVNSIRRFVNNGPLVRIAGTLLAALIISSCEEYPQPYATAGFYPRAAPAGWWHDEGASGS
Ga0066903_10025858043300005764Tropical Forest SoilMRKLPVNSIRRSVKNAPLVRIAGTLLAALIISSCEEYPQPYATQGFYPRAAPAGWWHDEGAS
Ga0066903_10073486333300005764Tropical Forest SoilVNNGQVLRIAAALLAALIICSCEEYPTPYQPGMYPRATPAGWWEDEGVSGKPRIVVHIG
Ga0066903_10562824123300005764Tropical Forest SoilMSKLPVNSIRRFVNNGPLVRIAGTLLAALIISSCEEYPQPYATAGFYPRAAPAGWWHDEGASGS
Ga0066903_10726014533300005764Tropical Forest SoilMSKLPSNIIRRFVNNGRVLRIAGTLLAALIICSCEEYPPYAPGLYPRATPAGWWNDEGVSGSARIVVHI
Ga0066665_1064215313300006796SoilMSNLPLNTIRRFVNNGRLLKIAGTLLAALTVCSCEEYPPPYEPGFYPRATPAGWWNDDGASGSAKI
Ga0075428_10251673513300006844Populus RhizosphereMSKLPLNSIRRPVKNPPILQIAATLLVTLIICSCEEYPQPYATAGPGFYPRAAPAG
Ga0105244_1048759613300009036Miscanthus RhizosphereMSKLPVNSIRRFVNNVPLVRIAVTLLAALIICSCEEYPQPYSPTGLYPRAAPAGWWND
Ga0105245_1074136613300009098Miscanthus RhizosphereMSKLPVNSIRRFVNNVPLVRIAVTLLAALIICSCEEYPQPYSPTGFYPRAAPAGWWNDNGVSGSPRIVVH
Ga0066709_10117174313300009137Grasslands SoilMLPLNTIRPFVNNGRLLKIAGTLIAALIICSCEEYPPYEAGLYPRAAPAGWWNDEGASVSAKII
Ga0105243_1074548523300009148Miscanthus RhizosphereMRTLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYARTGGLYPRAAPIGWWHEEGATGNPRIVVHIGE
Ga0111538_1381589213300009156Populus RhizosphereMSKLPVNSIRRIVNNVPLVRIAVTLLAALIICSCEEYPQPYSPTGFYPRAAPAGWWN
Ga0075423_1182713213300009162Populus RhizosphereMNSIRRSVNNGRVLRIAGTLLAAVIISSCEEYPAPYEPGLYPRAVPAGWWDDEGASGKPRIVVHIG
Ga0126374_1043823613300009792Tropical Forest SoilMNNLPLNSIRRLVNNVPLVRITGALLAALLISSCEEYPTPYQPGMYPRATPAGWWDDEGASGKPRIVVHIGEQKGYFYKG
Ga0126380_1043682813300010043Tropical Forest SoilMNNLPLNSIRRLVNNVPLVRITGALLAALLISSCEEYPTPYQPGMYPRATAAGWWDDEAASGKPRIVV
Ga0134109_1022077813300010320Grasslands SoilMTNLTLNSIRRFVNNGRLLRIAGTLIAALIICGCEEYPTPYEPGLYPRAAPAGW
Ga0134063_1048293723300010335Grasslands SoilMSKLPLNSIRRFVNNGRLLRIAGTLLVALIISSCEEYPTPYQPGLYPRAAPAGWWDDDGASGKPRIIVH
Ga0126378_1075421223300010361Tropical Forest SoilMSNLPLNSIRRFVNNGRVLRIAGALFAALIICSCEEYPTPYQPGMYPRASAAGWWDDEGASGKPRIIVHVGEQKAY
Ga0126377_1114187013300010362Tropical Forest SoilMSTHPLNSIRRFVNNAPLLRIAGALLAALIICSCEEYPSPYEAGAYPHAAPVGFWNDDGVSGKPRIVVHI
Ga0126381_10178970323300010376Tropical Forest SoilMSKLPVNSIRRFVNNGPLVRIAGTLLAALIISSCEEYPQPYATAGFYPRAAPAGWWHDEGASGSS
Ga0126381_10382645123300010376Tropical Forest SoilMRNQQLNSIRRRVNNAPLLKITGTLLAAVIISSCEEYPTPYQPGLYPRAAPAGWWDAEGASGKPRIIVHVGEQK
Ga0126381_10407971513300010376Tropical Forest SoilMRRFLNRGRVFEIAGTLLAALIVCSCEEYPTPNQPGLYPRAMPAGWWNSEGASGNARIIVHIGEQKAY
Ga0126381_10485294923300010376Tropical Forest SoilMSKLPVNSTRRFVKNIPLVRIAGALLAALIISSCEEYPQPYGANAFYPRAAPAGWWNDDGISGSPRIVVHIGE
Ga0137391_1143624213300011270Vadose Zone SoilMSKLPLNSIRRFVNNGRVLRIAGTLLAALIISSCEEYPTPYQPGLYPRASPAGWWNDEGTSGKPRIIVHIGEQQAYFYK
Ga0137364_1059373713300012198Vadose Zone SoilMSNLPLNSIRRFVNNGRVLRIAGTLFAALIICSCEEYPTPYKPGLYPRAIPAGWWDDEGASGKQRIIVHIGEQKAYF
Ga0137363_1121783323300012202Vadose Zone SoilMLPLNTIRPFVNNGRLLKIAGTLLAALIICSCEEYPPYEPGLYPRATPAGWWNDE
Ga0137380_1086719223300012206Vadose Zone SoilMSKLPLNSIRRFVNNGRVLRIAGTLLAALIISSCEEYPTPYQPGLYPRATPAGWWND
Ga0137376_1107262313300012208Vadose Zone SoilLNEQAPFNTIRRFVNNCRLLRIAGTLFAALIICSCEEYPPYEPGLYPRATPAGWWNDEGVSGS
Ga0137372_1045130323300012350Vadose Zone SoilMSKLPLNSIRRFVNNGRVLRIAGALLAALIVCSCEEYPTPYQPGLYPRASPAGWWNDEGASGKPRIIVHIGE
Ga0137375_1135054323300012360Vadose Zone SoilMRYLSLNSIRRFVNNAPLVRIAGMLLAALIICSCEEYPQPYGATGFYPRAAP
Ga0157354_100652023300012517Unplanted SoilMRNLPLNSIRPFVNNGRILRIAGTLLAALIICSCEEYPEPYATPGGVYPRGAPAPIGWWHDEGASG
Ga0137398_1056397813300012683Vadose Zone SoilMSKLPLNSIRRFVNNGRVLRIAGALLATLIICGCEEYPTPYQPGLYPRASPAGWWNDEGT
Ga0157303_1002821413300012896SoilMRTLPLNSIRRFVNTGRILRIAGTLLAALIICSCEEYPEPYGAGAGFYPRAAPAGWWHDEGA
Ga0157302_1001919033300012915SoilMRTLPLNSIRRFVNAGRILRIAGTLLAALIICSCEEYPEPYAAGAGFYPRPAPAGWWHDE
Ga0137407_1056563213300012930Vadose Zone SoilMSRLPLNSIRRFVNNGRVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGWWDDDG
Ga0126375_1191946033300012948Tropical Forest SoilMSKRLSNSIRRSVNTGRVLKIAGTLLAALIICSCEEYPPYAPGLFPRATPAGWWND
Ga0164303_1143656623300012957SoilMSKLPLNSIRRFVNNARVLRIAGPLLAALIISSCEEYPTPYQPGLYPRAAPAGFWNDEGASGKP
Ga0164301_1055562513300012960SoilMRRLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYAAGAGFYPRPAPAGWWHDEGASGKPRIVVR
Ga0164302_1142230913300012961SoilMRNLPLNSIRPFVNNGRLLRIAGTLLVALIICSCEEYPEPYAGPGGLYPHAAPIGWWHDEGATGNP
Ga0164307_1105753213300012987SoilMSNLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPTPYQQGLYPRAAPAGWWNDEGASGKPRI
Ga0164305_1054228823300012989SoilMSNLPLNSIRRFVNSGRLLRIAGTLLAAVIICGCEEYPTPYEPGLYPRAAPAGWWNDEAASGSPKIVV
Ga0164305_1089569523300012989SoilMSKLPLNSIRRFVNNARVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGFWNDEGASGK
Ga0157370_1041974833300013104Corn RhizosphereMRRLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYAAGAGFYPRPAPAGWWHDEGASGKPRIVVRIGEQKAY
Ga0157378_1043451013300013297Miscanthus RhizosphereMRRLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYAAGAGFYPRPAPAGWWHDEGASGKPRIVV
Ga0163162_1013407313300013306Switchgrass RhizosphereMSKLPVNSIRRFVNNVPLVRIAVTLLAALIICSCEEYPQPYSPTGFYPRAAPAGWWNDNGVSG
Ga0163162_1298754113300013306Switchgrass RhizosphereMRHLPLNSIRPFVNNGRILRIAGTLLAALIICSCEEYPEPYARNGGLFPRAAPIGWWHEEGATGSPRIVVHIGEQKAYF
Ga0120127_1010573313300013503PermafrostMSKLPLNSIRRFVNNGRILRIAGTLLAALIICSCEEYPQPYATGGGLYPRAAPAGWWHDEGASGKPRIV
Ga0134081_1006057733300014150Grasslands SoilMSKLPLNSIRRFVNNGRVLRIAGTLLAALIISSCEEYPTPYQPGFYPRATAAGSWNDEGASGKA
Ga0134078_1057972123300014157Grasslands SoilMNNLPLNSIRRFVNNGRVLRIAGALLAALIISSCEEYPTPYQPGLYPRATAA
Ga0157376_1300255323300014969Miscanthus RhizosphereMRNLPLNSIRPSVNNGRLLRIAGTLLAALIICSCEEYPEPYGAGAGFYPRAAPAGWRHDEGASGK
Ga0132256_10120358723300015372Arabidopsis RhizosphereMLKLSVNSIRRFVNNAPLVLRIAGTLLAALIICSCEEYPQPYGPTGFYPRAAPAGWWNDDGISGSPRIVVHIGEQKAY
Ga0132256_10389935313300015372Arabidopsis RhizosphereMRNLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYARPGGLFPRAAPIGWWHEEGATGSPR
Ga0132255_10396712913300015374Arabidopsis RhizosphereMSKLPVNSIRRFVNNVPLVRIAVTLLAALIICSCEEYPQPYSPAGFYPRAAPAG
Ga0182033_1155259223300016319SoilMRNLRLNSIPRFVNKWRVLRIAATLLAALIISSCEEYPAPYEPGLYPSAVPAGRWDDEGAYGKPRIVVHIGEQKGYFYKG
Ga0182040_1177380713300016387SoilMSKLPVNSTRRFVNNIPLLRIAWALLAALIISSCEEYPQPYGPAGSYPRAAPA
Ga0182038_1183109823300016445SoilMRNLPLNSIRRSVNTSPVMRIAGTLLAALIISSCEEYPAPYESGLYPRAAPAGWWNDEDGSGKPRIVVHVGEQKA
Ga0184604_1002114233300018000Groundwater SedimentMSKLPLNSIRRFVKNPPILQIAGTLLAALIICSCEEYPSPYATAGPGFYPRAAPAGWWN
Ga0184621_1009595313300018054Groundwater SedimentMSKLPLNSIRRFVKSPPILQIAGTLLAALIICSCEEYPGPYATAGPGFYPRAAPAGWWNDDSASGKPRIVVHVGEQKAYF
Ga0184623_1044847923300018056Groundwater SedimentMSKLPLNSIRRFVNNARVLRIAGTLLAALIICSCEEYPTPYQPGLYPRAAPA
Ga0184617_113225913300018066Groundwater SedimentMSKLPLNSIRRFVNNGRVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGWWDDDGA
Ga0193754_100552813300019872SoilMSKLPLNSIRRFVNNARVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGFWNDEGASGKPRII
Ga0193723_108027523300019879SoilMISPRSNTIRRSVRTGWPFQIAGALLAALILCSCEEYPPYTPGLYPRPAVAGWWNDEGVSGSPKIVVHIGEQ
Ga0193713_106076223300019882SoilMSKLPVNSIRRFVNNRRVLRIAGTLLVALIICSCEEYPTPYQPGLYPRAAPAGWWNDEGASGKPRIVVHIGEQKGYF
Ga0193711_101373713300019997SoilMSKLPLNSIRRFVNNGRVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGLWD
Ga0193735_108806823300020006SoilMSRLPLNSIRRFVNNGRVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGWWNDEGASGKSRIIVHIGEQKAYFYK
Ga0193735_114180713300020006SoilMSKLPLNSIRRFVNNGRVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGWWDDDGASGKPRII
Ga0193757_102561113300020008SoilMSNLPLNSIRRFVNNARVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGFWNDEGASGKPRIIVHIGEQKADFYKGKTLVG
Ga0210378_1018617823300021073Groundwater SedimentMSKLPLNSIRRFVKSPPILQIAGTLLAALIICSCEEYPQPYATAGPGFYPRAAPAGWWNDDSASGKPRIVVH
Ga0193719_1036564013300021344SoilMSKLPLNSIRRFVKSPPILQIAGTLLAALIICSCEEYPGPYATAGPGFYPRAA
Ga0126371_1217535213300021560Tropical Forest SoilMSNSAVNSIRRSVKGPPVLQIAGLLLVVLIICSCEEYPTPYEPGLYPRAAPAGWWDDEGASGEPRIVVHIGEQ
Ga0224452_114908113300022534Groundwater SedimentMSNLPLNSIRRFVNNGRVLRIAGTLLAALIICSCEEYPTPYQPGLYPRAAPAGWWDDD
Ga0222622_1056655423300022756Groundwater SedimentMSKLALNSIRRFVNNAQVLRIAGTLLAALIISSCEEYPTPYQPGLYPRAAPAGFWNDEGASGKPRI
Ga0207697_1036584823300025315Corn, Switchgrass And Miscanthus RhizosphereMRHLPLNSIRPFVNNGRILRIAGTLLAALIICSCEEYPEPYARPGGLFPRAAPIGWWHEEGASGSPRIVVH
Ga0207710_1007261213300025900Switchgrass RhizosphereMSKLPVNSIRRFVNNPPLVRIAGMVLAALIICSCEEYPQQYPPTGFYPRAAPAGWWNDDGVSGSP
Ga0207685_1047641113300025905Corn, Switchgrass And Miscanthus RhizosphereMRHLPLNSIRPFVNNGRILRIAGTLLAALIICSCEEYPEPNARTGGLFPRAAPIGWWHDEGASGNPRIVVHI
Ga0207671_1035046533300025914Corn RhizosphereMSKLPVNSIRRFVNNVPLVRIAVTLLAALIICSCEEYPQPYSPTGFYPRAAPAGWWNDNGVSGSPRIVVHIGEQKA
Ga0207693_1046037013300025915Corn, Switchgrass And Miscanthus RhizosphereMSKLPVNSIRRFVNNGPLLRIAGTLLVALIICSCEEYPTPYQQGLYPRAAPAGWWNDE
Ga0207657_1035448333300025919Corn RhizosphereMRRLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYAAGARFYPRPA
Ga0207649_1028668733300025920Corn RhizosphereMRRLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYAAGAGFYPRPAPAGWWHDEGASGKPRIV
Ga0207687_1101886213300025927Miscanthus RhizosphereMSKLPVNSIRRFVNNVPLVRIAVTLLAALIICSCEEYPQPYSPTGFYPRAAPAGWWNDNGVSGSPRIVVHIGEQKAY
Ga0207706_1015514313300025933Corn RhizosphereMSKLPVNSIRRFVNNVPLVRIAVTLLAALIICSCEEYPQPYSPTGFYPRAAPAGWWNDNGVSGSPRIVVHIGEQKAYF
Ga0207691_1042273133300025940Miscanthus RhizosphereMRTLPLNSIRRFVNTGRILRIAGTLLAALIICSCEEYPEPYGAGAGFYPRAAPAGWWHDEGASGKPRIVVRIGEQK
Ga0207679_1070332523300025945Corn RhizosphereMRNLPLNSIRRFVNNAPLLRITGALLAALIICSCEEYPTPYQPGVYPRAAAAGWWNDEGVSGTPRI
Ga0207658_1079119713300025986Switchgrass RhizosphereMRTLPLNSIRRFVNTGRILRIAGTLLAALIICSCEEYPEPYGAGAGFYPRAAPAGWWHDEGASGKPRIVVRIGEQKAY
Ga0207677_1086024223300026023Miscanthus RhizosphereMRRLPLNSIRRFVNNGRILRIAGTLLVALIICSCEEYPEPYAAGAGFYPRPAPAG
Ga0207641_1161720423300026088Switchgrass RhizosphereMRNLPLNSIRPFVNTGPLLKITGALLAALIISSCEEYPTPYQPGVYPRAAAAGWWN
Ga0207676_1096490313300026095Switchgrass RhizosphereMRNLPLNSIRPFVNTGPLLKITGALLAALIICSCEEYPTPYQPGVYPRAAPAGWWN
Ga0207698_1110675423300026142Corn RhizosphereMSKLPVNSIRRFVNNVPLVRIAVTLLAALIICSCEEYPQPYSPTGFYPRAAPAGWWNDNGVSGSPRI
Ga0209155_114389713300026316SoilMSNLPLNSIRRFVNNGRVLRIAGTLVAALIICSCEEYPTPYEPGLYPRAAPAGWWDDEGASGKPRIVVHVGEQKAY
Ga0257156_107032423300026498SoilMLPLNTIRPFVNNGQLLKIAGTLLAALLICSCEEYPPYEPGLYPRATPAGWWNDEDASGSAKIVVHIGEQKAYFYKDKHLV
Ga0209474_1036908613300026550SoilMTNLTLNSIRRFVNNGRLLRIAGTLIAALIICGCEEYPTPYEPGLYPRAAPAGWWDD
Ga0207570_100815913300026944SoilMSKLPVNSIRRFVNNVPLVRIAVTLLAALIICSCEEYPQPYSPTGFYPRAAPAG
Ga0207618_10160423300027433SoilMRTLPLNSIRRFVNTGRILRIAGTLLAALIICSCEEYPEPYGAGAGFYPRAAPAGWWH
Ga0209622_100635513300027502Forest SoilMSIRPFNSIRRSVKSPPILQIAGTLVAALIICSCQEYPTPYAAGFYPRATP
Ga0209811_1002974913300027821Surface SoilMSKLLLNSIRRSVKSPPILQIAGTLLAALIICSCEEYPEPYARNGSVFPRAAPI
Ga0307304_1060225713300028885SoilMRHLPLNSIRRFVNNGRILRIAGTLLAALIICSCEEYPEPYARTGGLYPRAAP
Ga0307469_1201615423300031720Hardwood Forest SoilMRYLSVNSIRRSVKRPPFLQIAGTLLVALIICSCEEYPTPYQPGFYPRAAP
Ga0307469_1216654323300031720Hardwood Forest SoilMSIRPFNSIRRSVKGPLILQIAGTLVAALIVCSCEEYPTAYGPGLYPRATPVGFWNAEGA
Ga0307468_10201083613300031740Hardwood Forest SoilMSKLPLNSIRRFVNNGRVLRIAGTLLAALIICSCEEYPQPYATGLYPRAAPAGWWNDEGVSG
Ga0306918_1009751713300031744SoilMRNLRLNSIPRFVNKWRVLRIAATLLAALIISSCEEYPAPYEPGLYPSAVPAGRWDDEGAYGKPRI
Ga0307473_1144199523300031820Hardwood Forest SoilMSIRPLNSIRHSVKGPPILQIAGTLVAALIVCSCEEYPTPYQPGLYPRAVPAGWWNGEGASGSAK
Ga0310917_1026547333300031833SoilMSNSAVISIRRSVKGPPILQIAGLLLVALIICSCEEYPTPYQPGLYPRAAPAGWWKDEGASGKPRIVVHIGEQ
Ga0306925_1175977213300031890SoilMRNLRLNSIPRFVNKWRVLRIAATLLAALIISSCEEYPAPYEPGLYPSAVPAGRWDDEGAYGKPRIVVHIGEQKGY
Ga0306921_1084800613300031912SoilMRNLPLNSIRRSVNTSPVMRIAGTLLAALIISSCEEYPAPYESGLYPRAAPAGWWNDEDGSGKPRIVVHVGEQKAYFYKGK
Ga0306921_1217386023300031912SoilMLLRTNLAPDTMRRFVNRGRVFEIAGTLLAALIVCSCEEYPNPYQPGLYPRAMPAGWWNNKGASGNARIIV
Ga0306926_1223649413300031954SoilMLLRTNLAPDTMRRFVNRGRVFEIAGTLLAALIVCSCEEYPNPYQPGLYPRAMPAG
Ga0306922_1194972623300032001SoilMSKLPVNSTRRFVNNIPLLRIAGALLAALIISSCEEYPQPYGANGFYPRAAPAGWWND

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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