Metagenome / Metatranscriptome Family F064237

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064237
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	55 residues
Representative Sequence	MKLSEPVIIARKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR
Number of Associated Samples	103
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	19.38 %
% of genes from short scaffolds (< 2000 bps)	80.62 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.047 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.279 % of family members)
Environment Ontology (ENVO)	Unclassified (37.984 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (36.434 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.14% β-sheet: 0.00% Coil/Unstructured: 63.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01850	PIN	27.91
PF01557	FAA_hydrolase	3.10
PF00563	EAL	2.33
PF01070	FMN_dh	2.33
PF02719	Polysacc_synt_2	2.33
PF01909	NTP_transf_2	1.55
PF04264	YceI	1.55
PF13531	SBP_bac_11	1.55
PF13291	ACT_4	0.78
PF01904	DUF72	0.78
PF09339	HTH_IclR	0.78
PF01510	Amidase_2	0.78
PF02518	HATPase_c	0.78
PF05198	IF3_N	0.78
PF07589	PEP-CTERM	0.78
PF13673	Acetyltransf_10	0.78
PF07973	tRNA_SAD	0.78
PF06850	PHB_depo_C	0.78
PF08570	DUF1761	0.78
PF04014	MazE_antitoxin	0.78
PF07927	HicA_toxin	0.78
PF09360	zf-CDGSH	0.78
PF14224	DUF4331	0.78
PF10518	TAT_signal	0.78
PF01370	Epimerase	0.78
PF13328	HD_4	0.78
PF06114	Peptidase_M78	0.78
PF12796	Ank_2	0.78
PF13458	Peripla_BP_6	0.78
PF04392	ABC_sub_bind	0.78
PF13432	TPR_16	0.78
PF13426	PAS_9	0.78
PF13548	DUF4126	0.78
PF13592	HTH_33	0.78
PF13661	2OG-FeII_Oxy_4	0.78
PF17167	Glyco_hydro_36	0.78
PF01522	Polysacc_deac_1	0.78
PF15723	MqsR_toxin	0.78
PF09907	HigB_toxin	0.78
PF02826	2-Hacid_dh_C	0.78
PF01717	Meth_synt_2	0.78
PF06537	DHOR	0.78
PF12706	Lactamase_B_2	0.78
PF13744	HTH_37	0.78
PF00005	ABC_tran	0.78
PF03169	OPT	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	4.65
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	4.65
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	4.65
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	2.33
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	2.33
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	2.33
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	2.33
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	2.33
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	2.33
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	2.33
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	2.33
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	2.33
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	2.33
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	1.55
COG1297	Predicted oligopeptide transporter, OPT family	General function prediction only [R]	0.78
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.78
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.78
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.78
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	0.78
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.78
COG4553	Poly-beta-hydroxyalkanoate depolymerase	Lipid transport and metabolism [I]	0.78
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.78
COG0290	Translation initiation factor IF-3	Translation, ribosomal structure and biogenesis [J]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.05 %
Unclassified	root	N/A	13.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.05 %
Unclassified	root	N/A	13.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.05 %
Unclassified	root	N/A	13.95 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.11 %
Unclassified	root	N/A	13.95 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	17.83 %
Unclassified	root	N/A	13.95 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.33 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.33 %
Candidatus Muproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.95 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	3.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.33 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.33 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.78 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.78 %
Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.95 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.10 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.33 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.33 %
Hahellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae	0.78 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.78 %
Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37	0.78 %
Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.95 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.10 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.33 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.33 %
Hahella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella	0.78 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.78 %
Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37	0.78 %
Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.95 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.10 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.33 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.33 %
Hahella chejuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → Hahella chejuensis	0.78 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.78 %
Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37	0.78 %
Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001380\|JGI1356J14229_10215097	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300001836\|RCM27_1034548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	591	Open in IMG/M
3300002104\|C687J26621_10067896	All Organisms → cellular organisms → Bacteria → Proteobacteria	1217	Open in IMG/M
3300002104\|C687J26621_10079491	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300002243\|C687J29039_10086833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1165	Open in IMG/M
3300003465\|P52013CM_1005869	All Organisms → cellular organisms → Bacteria → Proteobacteria	8621	Open in IMG/M
3300004062\|Ga0055500_10103328	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300004157\|Ga0062590_101052024	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300004463\|Ga0063356_101077913	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300005167\|Ga0066672_10332534	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005176\|Ga0066679_10491111	Not Available	801	Open in IMG/M
3300005187\|Ga0066675_11290440	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005206\|Ga0068995_10033625	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005552\|Ga0066701_10151367	All Organisms → cellular organisms → Bacteria → Proteobacteria	1397	Open in IMG/M
3300005575\|Ga0066702_10054934	All Organisms → cellular organisms → Bacteria	2154	Open in IMG/M
3300005586\|Ga0066691_10709425	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005829\|Ga0074479_10235381	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005829\|Ga0074479_10441987	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300005830\|Ga0074473_10654379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4201	Open in IMG/M
3300006034\|Ga0066656_10542122	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300006354\|Ga0075021_10326413	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300006796\|Ga0066665_10223480	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300007004\|Ga0079218_12189647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	641	Open in IMG/M
3300009038\|Ga0099829_10228734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1512	Open in IMG/M
3300009053\|Ga0105095_10822895	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300009089\|Ga0099828_10412888	Not Available	1217	Open in IMG/M
3300009090\|Ga0099827_10292680	All Organisms → cellular organisms → Bacteria → Proteobacteria	1376	Open in IMG/M
3300009090\|Ga0099827_10501719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1043	Open in IMG/M
3300009090\|Ga0099827_11353727	Not Available	619	Open in IMG/M
3300009090\|Ga0099827_11844862	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300009137\|Ga0066709_100316933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37	2126	Open in IMG/M
3300009143\|Ga0099792_10403147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	837	Open in IMG/M
3300009163\|Ga0114970_10615985	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300009444\|Ga0114945_10004372	All Organisms → cellular organisms → Bacteria → Proteobacteria	7859	Open in IMG/M
3300009873\|Ga0131077_10122675	All Organisms → cellular organisms → Bacteria	3031	Open in IMG/M
3300009873\|Ga0131077_10130035	All Organisms → cellular organisms → Bacteria	2906	Open in IMG/M
3300010885\|Ga0133913_10607151	All Organisms → cellular organisms → Bacteria	2872	Open in IMG/M
3300011270\|Ga0137391_10289125	Not Available	1415	Open in IMG/M
3300011271\|Ga0137393_10886370	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300011409\|Ga0137323_1149891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	503	Open in IMG/M
3300011420\|Ga0137314_1076433	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	815	Open in IMG/M
3300011428\|Ga0137456_1160465	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300011429\|Ga0137455_1018243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1901	Open in IMG/M
3300011430\|Ga0137423_1173150	Not Available	651	Open in IMG/M
3300011433\|Ga0137443_1172462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	645	Open in IMG/M
3300011435\|Ga0137426_1068326	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300011436\|Ga0137458_1011232	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300011441\|Ga0137452_1013440	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300011441\|Ga0137452_1021662	All Organisms → cellular organisms → Bacteria → Proteobacteria	1984	Open in IMG/M
3300012199\|Ga0137383_10197254	Not Available	1475	Open in IMG/M
3300012204\|Ga0137374_10099952	All Organisms → cellular organisms → Bacteria → Proteobacteria	2739	Open in IMG/M
3300012206\|Ga0137380_10896119	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300012209\|Ga0137379_10525363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → Hahella chejuensis	1091	Open in IMG/M
3300012227\|Ga0137449_1036337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	989	Open in IMG/M
3300012231\|Ga0137465_1022729	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300012354\|Ga0137366_10003139	All Organisms → cellular organisms → Bacteria → Proteobacteria	12806	Open in IMG/M
3300012360\|Ga0137375_10432591	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300012360\|Ga0137375_10860842	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300012685\|Ga0137397_10732926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	734	Open in IMG/M
3300012922\|Ga0137394_10679594	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300012944\|Ga0137410_10565441	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10059498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3187	Open in IMG/M
3300015203\|Ga0167650_1052740	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300015254\|Ga0180089_1083217	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300017997\|Ga0184610_1020052	All Organisms → cellular organisms → Bacteria → Proteobacteria	1790	Open in IMG/M
3300018031\|Ga0184634_10544470	Not Available	514	Open in IMG/M
3300018063\|Ga0184637_10342623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18	899	Open in IMG/M
3300018063\|Ga0184637_10397558	Not Available	821	Open in IMG/M
3300018071\|Ga0184618_10198626	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300018077\|Ga0184633_10175538	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300018079\|Ga0184627_10104880	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300019360\|Ga0187894_10450971	Not Available	564	Open in IMG/M
3300019487\|Ga0187893_10002963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	35763	Open in IMG/M
3300019883\|Ga0193725_1032793	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300020195\|Ga0163150_10174654	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300020198\|Ga0194120_10041721	All Organisms → cellular organisms → Bacteria	3846	Open in IMG/M
3300021063\|Ga0206227_1004267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1855	Open in IMG/M
3300021064\|Ga0206225_1052265	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300021086\|Ga0179596_10315165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	782	Open in IMG/M
3300021859\|Ga0210334_10606846	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300021859\|Ga0210334_10680459	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300022563\|Ga0212128_10398865	Not Available	852	Open in IMG/M
3300022563\|Ga0212128_10959047	Not Available	502	Open in IMG/M
3300025159\|Ga0209619_10441551	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300025160\|Ga0209109_10295026	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300025164\|Ga0209521_10303540	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300025289\|Ga0209002_10604236	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300025311\|Ga0209343_10012547	All Organisms → cellular organisms → Bacteria → Proteobacteria	9437	Open in IMG/M
3300025311\|Ga0209343_10203889	All Organisms → cellular organisms → Bacteria → Proteobacteria	1473	Open in IMG/M
3300025311\|Ga0209343_10340662	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300025311\|Ga0209343_10594461	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300025311\|Ga0209343_10713425	Not Available	576	Open in IMG/M
3300025311\|Ga0209343_10745008	Not Available	555	Open in IMG/M
3300025312\|Ga0209321_10203303	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300025312\|Ga0209321_10388038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	658	Open in IMG/M
3300025324\|Ga0209640_10041738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3995	Open in IMG/M
3300025324\|Ga0209640_10151190	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300025324\|Ga0209640_10160775	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300025327\|Ga0209751_10075343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2923	Open in IMG/M
3300025327\|Ga0209751_10850692	Not Available	706	Open in IMG/M
3300026315\|Ga0209686_1206224	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300026318\|Ga0209471_1022970	All Organisms → cellular organisms → Bacteria	3123	Open in IMG/M
3300026524\|Ga0209690_1310946	Not Available	501	Open in IMG/M
3300026527\|Ga0209059_1056389	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300026538\|Ga0209056_10602612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	554	Open in IMG/M
3300027513\|Ga0208685_1140916	Not Available	515	Open in IMG/M
3300027903\|Ga0209488_10392757	Not Available	1028	Open in IMG/M
3300028828\|Ga0307312_10934200	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
(restricted) 3300031237\|Ga0255334_1040960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	517	Open in IMG/M
3300031562\|Ga0310886_10999665	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031576\|Ga0247727_10012605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	14468	Open in IMG/M
3300031576\|Ga0247727_10045754	All Organisms → cellular organisms → Bacteria	5481	Open in IMG/M
3300031965\|Ga0326597_10275296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1927	Open in IMG/M
3300032163\|Ga0315281_10011071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12374	Open in IMG/M
3300032163\|Ga0315281_10468550	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300033407\|Ga0214472_10018001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7310	Open in IMG/M
3300033407\|Ga0214472_10102679	All Organisms → cellular organisms → Bacteria → Proteobacteria	2838	Open in IMG/M
3300033417\|Ga0214471_10129137	All Organisms → cellular organisms → Bacteria → Proteobacteria	2082	Open in IMG/M
3300033417\|Ga0214471_10193744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1669	Open in IMG/M
3300033813\|Ga0364928_0165889	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300033815\|Ga0364946_052464	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300034114\|Ga0364938_015525	Not Available	1113	Open in IMG/M
3300034149\|Ga0364929_0242716	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300034164\|Ga0364940_0052459	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300034164\|Ga0364940_0136298	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300034176\|Ga0364931_0216328	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300034177\|Ga0364932_0182052	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300034177\|Ga0364932_0412737	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300034354\|Ga0364943_0142065	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.67%
Engineered	Engineered	1.55%
Host-Associated	Host-Associated	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.91%
Aquatic	Environmental → Aquatic	38.76%
Wastewater	Engineered → Wastewater	1.55%
Plants	Host-Associated → Plants	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.51%
Sediment	Environmental → Aquatic → Sediment	19.38%
Freshwater	Environmental → Aquatic → Freshwater	13.95%
Floodplain	Environmental → Terrestrial → Floodplain	7.75%
Marine	Environmental → Aquatic → Marine	3.10%
Cave	Environmental → Terrestrial → Cave	3.10%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.33%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.55%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	19.38%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	7.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	6.98%
Lake	Environmental → Aquatic → Freshwater → Lake	5.43%
Loam	Environmental → Terrestrial → Soil → Loam	5.43%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	3.10%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.33%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.55%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.55%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	19.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.08%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	7.75%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	6.20%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	4.65%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.10%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	3.10%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	2.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.55%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.55%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.78%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.28%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	10.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.30%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	7.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	6.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.10%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	2.33%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.55%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.55%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.55%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.55%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.55%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.78%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.78%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.78%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300001836	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM27, ROCA_DNA191_0.2um_MCP-N_C_3a	Environmental	Open in IMG/M
3300002104	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental	Open in IMG/M
3300021063	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4	Environmental	Open in IMG/M
3300021064	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos B2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031237 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_35cm_T3_129	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1356J14229_102150971	3300001380	Groundwater	ETAAMKVSEPVIIVRRVVAAKRRAAGRRIAANIRRLQRTRTTRTAAQALAEARGERLAR*
RCM27_10345481	3300001836	Marine Plankton	MKHSEPLVIVRKIDSARCAAAGRRIAANIRRLQKKPGTRTASQALAEARGERFQR**L
C687J26621_100678964	3300002104	Groundwater	MKVSEPVIIVRRVVAAKRRAAGRRIAANIRRLQKTRTTRTAAQALAEARGERLAR*
C687J26621_100794911	3300002104	Groundwater	MKLTEPVIVARKVLPAKRRASGRRIAANIRRLQRIRGTRTAGQALAEARGERLAR*
C687J29039_100868332	3300002243	Soil	MKMSESVIVARRIVAAKRRAAGRRIAANIRRLQRARTTRTAAQALAEARGE*
P52013CM_10058693	3300003465	Ore Pile And Mine Drainage Contaminated Soil	MMKAFEPIVVARKVDPARRRAAAKWIAANIRRLQKSRSARTAGQALAEARGERLAR*
Ga0055500_101033281	3300004062	Natural And Restored Wetlands	VARKIVPAKRRAAGRRIAANIRRLQRIRSTRTASQALAEARGERLAR*
Ga0062590_1010520241	3300004157	Soil	MKLTEPVVISRKIVAAKRRAAGKRIAANIRRLQRIRRTRTAGQALAETRGQRLAR*
Ga0063356_1010779132	3300004463	Arabidopsis Thaliana Rhizosphere	MKLTEPVVISRKIIAAKRRAAGKRIAANIRRLQRIRRTRTAGQALAEARGQRLAR*
Ga0066672_103325343	3300005167	Soil	MKLSEPVIVARRIVAAKRRAAGRRIAANIRRLQRIRGTRTAGQALAEARGERLAR*
Ga0066679_104911111	3300005176	Soil	MKLSEPVIVVRRIVAAKRRAAGRRIAANIRRLQRIRGTRTAGQALAEAR
Ga0066675_112904402	3300005187	Soil	VIVARRIVAAKRRAAGRRIAANIRRLQRMRGTRTASQALAEARGERLAR*
Ga0068995_100336252	3300005206	Natural And Restored Wetlands	MKLTEPVIVARKIVPAKRRAAGRRIAANIRRLQRIRSTRTASQALAEARGERLAR*
Ga0066701_101513673	3300005552	Soil	LFDAIARGSRIGAAMKVSEPLIVFRKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0066702_100549343	3300005575	Soil	MKLSEPVIVVRRIVAAKRRAAGRRIAANIRRLQRIRGTRTAGQALAEARGERLAR*
Ga0066691_107094251	3300005586	Soil	SRIGAAMKASEPLIIGRKVIAAKRRAAGRRIAANILRLQRIRGARTAGQALAEARGERLAR*
Ga0074479_102353812	3300005829	Sediment (Intertidal)	MKLSEPVIIARKIVAAKRRAAGRRIAANIRRLQRMRGTRTATQALAEARGERLAR*
Ga0074479_104419872	3300005829	Sediment (Intertidal)	MKLTEPMVVARRVSSRARRAAARRIAANIRRLQKSRGTRTAAQALAEARGARLAR*
Ga0074473_106543792	3300005830	Sediment (Intertidal)	MKLTEPMVVVRKVSSEARRAAGRRIAANIRRLQKSRGTRTAAQALAEARGARLAR*
Ga0066656_105421222	3300006034	Soil	MKVSEPLIVSRKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0075021_103264131	3300006354	Watersheds	GSARAAMKVSEPVIIARKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0066665_102234802	3300006796	Soil	MKVSEPLIVSRKVVAAKRRAAGRRIAVNILRLQRIRGARTAGQALAEARGERLAR*
Ga0079218_121896471	3300007004	Agricultural Soil	VRITEPIIVARRIDPARRRAAGRRIAANIRRLQKSRTTRTATQALAEA
Ga0099829_102287342	3300009038	Vadose Zone Soil	MKASEPLIIGRKVIAAKRRAAGRRIAANILRLQRIRGARTAGQALAEARGERLAR*
Ga0105095_108228951	3300009053	Freshwater Sediment	VKINEPIIIGRRIDPAKRRAAGARIAANIRRLQKSKSKRTATQALAEARGQRLAR*
Ga0099828_104128881	3300009089	Vadose Zone Soil	MKVSEPVIIARKVVAAKRRATGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0099827_102926803	3300009090	Vadose Zone Soil	MKVSEPVIIARKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0099827_105017193	3300009090	Vadose Zone Soil	MKVSEPVIIARKVVAAKRRAAGKRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0099827_113537271	3300009090	Vadose Zone Soil	MKLSEPVIVARRIVAAKRRAAGRRIAANIRRLQRIRGTRTAGQALAEAR
Ga0099827_118448622	3300009090	Vadose Zone Soil	MKVPEPVIIARKVVAAKRRAAGRRIAANIRRLQRIRSSRTAGQALAEARGECLAR*
Ga0066709_1003169332	3300009137	Grasslands Soil	MKVSEPLIVFRKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0099792_104031472	3300009143	Vadose Zone Soil	MKASEPLIIGRKVIAAKRRAAGRRIAENILRLQRIRGARTAGQALAEARGERLAR*
Ga0114970_106159852	3300009163	Freshwater Lake	LEMDFSEPVVIARKINLAKRLAAGKRIAANIRRLQKAGGTRTARKALAEARGERLGR*
Ga0114945_100043727	3300009444	Thermal Springs	VKITEPVIVARRIDPAKRRAAGRRIVGNIRRLQKSRSARTAAQALAEARGERFAR*
Ga0131077_101226754	3300009873	Wastewater	VKINEPVVIGRRINPAKRRAAGARIAANIRRLQKSKSKRTAGQALAEARGQRLAR*
Ga0131077_101300355	3300009873	Wastewater	LREMELIESVVVVRKIVAAKRRAAGRRIAANIRRLQRMRGTRTAGQALAEARGERLAR*
Ga0133913_106071512	3300010885	Freshwater Lake	MDFSEPVVIARKINLAKRLAAGKRIAANIRRLQKAGGTRTARKALAEARGERLGR*
Ga0137391_102891254	3300011270	Vadose Zone Soil	MKVSEPVIISRKVVAAKRRAAGKRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0137393_108863703	3300011271	Vadose Zone Soil	SNTRIEMKLSEPVIVARRIVAAKRRAAGRRIAANIRRLQRIRGTRTAGQALAEARGERLAR*
Ga0137323_11498912	3300011409	Soil	MRVSEPVIIARKVVVAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0137314_10764332	3300011420	Soil	MKLSEPVIIARKVVAAKRRAAGRRIAANIRRLQRARGARTAGQALAEARGERLGR*
Ga0137456_11604652	3300011428	Soil	MKLTEPVVVARKVLPARRRAAGRRIAANIRRLQRIRGTRTAAQALAEARGERLAR*
Ga0137455_10182434	3300011429	Soil	MNVSEPVIIARKVVAAKRRAAGRRIAANIRRLQRARGARTAGQALAEARGERLGR*
Ga0137423_11731502	3300011430	Soil	MKMSEPVVVARKITAAKRRAAGRRIAANIDRLQRIRSTRTAGQALAEARGERLAR*
Ga0137443_11724622	3300011433	Soil	MKLSEPVIIARKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0137426_10683262	3300011435	Soil	MKLTEPLIVSRRINAVKRRAAGRRIAANIRRLQTSRTTRTAGQALAEARGHRLAR*
Ga0137458_10112322	3300011436	Soil	MKLTEPVVVARKVLPARRRAAGRRIAANIRRLQRIRGTRTASRALAEARGERLAR*
Ga0137452_10134403	3300011441	Soil	MKMSEPVVVARKITAAKRRAAGRRIAANIGRLQRIRSTRTASQALAEARGERLAR*
Ga0137452_10216623	3300011441	Soil	MRVSEPVIIARKVVVAKRRAAGWRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0137383_101972542	3300012199	Vadose Zone Soil	MNVSEPLIVSRKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0137374_100999523	3300012204	Vadose Zone Soil	MKLTEPVIVARKVIAAKRRAAGRRIEANIRRLQRIRTTRTAAQALAEARGERLAR*
Ga0137380_108961192	3300012206	Vadose Zone Soil	MKVSEPVVVARKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0137379_105253631	3300012209	Vadose Zone Soil	AAMKASEPLIIGRKVIAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR*
Ga0137449_10363374	3300012227	Soil	MKLTEPMIVARKVLPAKRRAAGRRIAANIRRLQRIRGTRTATQALAEARGERLAR*
Ga0137465_10227293	3300012231	Soil	MKASEPLIIGRKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAH*
Ga0137366_1000313914	3300012354	Vadose Zone Soil	MKASEPLIIGRKVIAAKRRAAGRRIAANIVRLQRIRGARTAGQALAEARGERLAR*
Ga0137375_104325912	3300012360	Vadose Zone Soil	MKVSEPSIVSRKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAKARGERLAR*
Ga0137375_108608422	3300012360	Vadose Zone Soil	MKVSESVVVARKVAAAKRRAAGRRIAANIRRLQRIRGSRTAGQALAEARGERLAR*
Ga0137397_107329262	3300012685	Vadose Zone Soil	MKISEPVIIARKVVAAKRRAAGRRIAANIRRLQRVRGSRTAGQALAEARGERLAR*
Ga0137394_106795941	3300012922	Vadose Zone Soil	VIDVIVFVRKVSPARRRAAGRRIAANIRRLQRVRTTRTAGDALAEARGERLAR*
Ga0137410_105654414	3300012944	Vadose Zone Soil	ARKVVAAKRRAAGRRIAANIRRLQRIRGARTAWQALAEARGERLAR*
(restricted) Ga0172373_100594986	3300013131	Freshwater	MKVTEPVVVARKIVPAKRRAAGLRIAANIRRLQKTRRARTASQALAEARGARLSR*
Ga0167650_10527404	3300015203	Glacier Forefield Soil	KIIAAKRRAAGRRIAANIRRLQRIRRTRTAGQALAEARGKRLAR*
Ga0180089_10832171	3300015254	Soil	SRGEGLQLPGTRAIGGKFAMKLTEPLIVSRRINAVKRRAAGRRIAANIRRLQTSRTTRTAGQALAEARGHRLAR*
Ga0184610_10200522	3300017997	Groundwater Sediment	MRVSEPVIIARKVVAAKRRAAGRRIAANIHRLQRIRGARTAGQALAEARGERLAR
Ga0184634_105444702	3300018031	Groundwater Sediment	SNMPFARKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR
Ga0184637_103426232	3300018063	Groundwater Sediment	MKVSEPVIIARKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR
Ga0184637_103975583	3300018063	Groundwater Sediment	VIVARKIDPAKRRAAGRRIAANIRRLQRLRGTRTAAQALAEARGERLAR
Ga0184618_101986262	3300018071	Groundwater Sediment	MKISEPVIITRKVVAAKRRAAGRRIAANIRRLQRVRGARTAEQALAEARGERLAR
Ga0184633_101755382	3300018077	Groundwater Sediment	MKLSEPVIVARKIIAAKRRAAGRRIAANINRLQRVRGTRTAGQALAEARGERLAR
Ga0184627_101048803	3300018079	Groundwater Sediment	VIIARKIFAAKRRAAGMRIAANIRRLRRFRGARTAGQALAEARGERLAR
Ga0187894_104509711	3300019360	Microbial Mat On Rocks	MELTEPVIIARKIVAAKRRAAGRRIAANIRRLQRMRGARTATQALAEARGERLAR
Ga0187893_1000296314	3300019487	Microbial Mat On Rocks	MKLTEPVIIARKIVAAKRRAAGRRIAANIRRLQRMRGARTATQALAEARGERLAR
Ga0193725_10327932	3300019883	Soil	MKISEPVIITRKVVAAKRRAAGRRIAANIRRLQRVRSARTAEQALAEARGERLAR
Ga0163150_101746542	3300020195	Freshwater Microbial Mat	MKLSEPVIVSCKINAAKRRAAGRRIAANIHRLQRSRKIRTAGQALAEARGQRLVR
Ga0194120_100417213	3300020198	Freshwater Lake	MKLVERMVVARKVSAAKRREAGKRIARTIKRLQRTRGTRTAEQALAEARGDRLAR
Ga0206227_10042672	3300021063	Deep Subsurface Sediment	MKLTEPVIVARKIVPAKRRAAGRRIAANIRRLQRLRGTRTAAQALAEARGERLAR
Ga0206225_10522652	3300021064	Deep Subsurface Sediment	MKMSEPVVVARRITAAKRRAAGRRIAANIGRLQRIRSTRTAGQALAEARGERLAR
Ga0179596_103151653	3300021086	Vadose Zone Soil	MKVSEPVIIARKVVAAKRRAAGKRIAANIRRLQRIRGARTAGQALAEARGERLAR
Ga0210334_106068462	3300021859	Estuarine	MKLTEPVVVARKIAPAKRRAAGRRIAANIRRLQRLRGTRTAARALAEARGERLAR
Ga0210334_106804593	3300021859	Estuarine	MKLTEPMVVVRKVSSEARRAAGRRIAANIRRLQKSRGTRTAAQALAEARGARLAR
Ga0212128_103988652	3300022563	Thermal Springs	MKMSEPVIVARKIVAAKRRAAGRRIAANIRRLQRARTARTAGQALAEARGERLAR
Ga0212128_109590471	3300022563	Thermal Springs	VKITEPVIVARRIDPAKRRAAGRRIVGNIRRLQKSRSARTAAQALAEARGERFAR
Ga0209619_104415512	3300025159	Soil	MKMSESVIVARRIVAAKRRAAGRRIAANIRRLQRARTTRTAAQALAEARGE
Ga0209109_102950263	3300025160	Soil	IVARKVLPAKRRAAGRRIAANIRRLQRIRGTRTAAQALAEARGERLAR
Ga0209521_103035402	3300025164	Soil	MKMSEPVIVGRKITAAKRHAAGRRIAANISRLQRMRSTRTAGQALAEARGERLAR
Ga0209002_106042362	3300025289	Soil	FLVAGAISTRIAMKMSEPVIVGRKITAAKRHAAGRRIAANISRLQRMRSTRTAGQALAEARGERLAR
Ga0209343_1001254711	3300025311	Groundwater	MKVSEPVIIVRRVVAAKRRAAGRRIAANIRRLQKTRTTRTAAQALAEARGERLAR
Ga0209343_102038893	3300025311	Groundwater	MKVTEPVVVARKVNAAKRRAAGRRIAANIRRLQKARGTRTATQALAEARGERLAR
Ga0209343_103406623	3300025311	Groundwater	MKLTEPLIVSRRINAVKRRAAGRRIAANIRRLQRSRTTRTAGQALAEARGHRLAR
Ga0209343_105944611	3300025311	Groundwater	MKFSEPVIVARRVSAARRRAAGKRIEANIRRLQKGRTTRTAGQALAEARGEHLAR
Ga0209343_107134251	3300025311	Groundwater	MKVSEPVIIARKIVAAKRLAAGRRIAANIRRLQRIRSARTAGQALAEARGERLAR
Ga0209343_107450081	3300025311	Groundwater	MKMSESVIVARRIVAAKRRAAGRRIAANIRRLQRARTTRTAAQAL
Ga0209321_102033031	3300025312	Soil	EPVIVARKITAAKRHAAGRRIAANISRLQRMRSTRTAGQALAEARGERLAR
Ga0209321_103880381	3300025312	Soil	MKMSESVIVARRIVAAKRRAAGRRIAANIRRLQRARTTRTAAQALAEARG
Ga0209640_100417383	3300025324	Soil	MKAFEPIVVARKVDPARRRAAAKWIAANIRRLQKSRSTRTAEQALAEARGERLAR
Ga0209640_101511904	3300025324	Soil	MKLTEPVIVARKVLPAKRRASGRRIAANIRRLQRIRGTRTAGQALAEARGERLAR
Ga0209640_101607752	3300025324	Soil	MKLTEPMVVARRVSSQARRAAGRRIAANIRRLQKSRGTRTAAQALAEARGARLAR
Ga0209751_100753434	3300025327	Soil	MKMSEPVIVGRKITAAKRHAAGRRIAANISRLQRMRSTRTAGQALAEARGERLARLVS
Ga0209751_108506921	3300025327	Soil	MKISEPMIIVRKVVAAKRRAAGKGIAANIRRLQQTRGSRTAAQALAEARGERLAR
Ga0209686_12062241	3300026315	Soil	MKLSEPVIVARRIVVAKRRAAGRRIAANIRRLQKIRGTRTAGQALAEARGERLAR
Ga0209471_10229701	3300026318	Soil	MKLSEPVIVARRIVAAKRRAAGRRIAANIRRLQRIRGTRTAGQALAEARGERLAR
Ga0209690_13109462	3300026524	Soil	MKVSEPLIVFRKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR
Ga0209059_10563893	3300026527	Soil	MKLSEPVIVVRRIVAAKRRAAGRRIAANIRRLQRIRGTRTAGQALAEARGERLAR
Ga0209056_106026122	3300026538	Soil	MKVSEPLIVSRKVVAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR
Ga0208685_11409162	3300027513	Soil	MNVSEPVIIARKVVAAKRRAAGRRIAANIRRLQRARGARTAGQALAEARGERLGR
Ga0209488_103927573	3300027903	Vadose Zone Soil	MKVSEPVIISRKVVAAKRRAAGKRIAANIRRLQRIRGARTAGQALAEARGERLAR
Ga0307312_109342002	3300028828	Soil	MKISEPVIIARKVIAAKRRAAGRRIAANIRRLQRIRGSRTAGQALAEARGERLAR
(restricted) Ga0255334_10409602	3300031237	Sandy Soil	MKLTEPMIVARKVLPARRRAAGRRIAANIRRLQRVRGTRTAGQALAEARGERLAR
Ga0310886_109996651	3300031562	Soil	VVISRKIIAAKRRAAGKRIAANIRRLQRIRRTRTAGQALAEARGQRLAR
Ga0247727_100126053	3300031576	Biofilm	MKLSEPVIVARKIKAARCRAAGKRITANISRLQKNRSARTASQALAEARGERLAR
Ga0247727_100457542	3300031576	Biofilm	MKLTEPVIVARKIVPAKRRAAGRRIAANIRRLQRIRTTRTAAQALAEARGERLAR
Ga0326597_102752964	3300031965	Soil	MKLSEPAIVARKIIPARRRAAGKRIAANIRRLQRRRGTRTAAQALAEARGERLAL
Ga0315281_1001107110	3300032163	Sediment	MKMSEPVIVARKINAARRRAAGKRITANISRLQRIRSARTAGQALVEARGERLAR
Ga0315281_104685502	3300032163	Sediment	MKISEPVVIARKVTVARRRAAGRRISTNIGRLQKIRSTRTAGQALAESRGERLAR
Ga0214472_100180018	3300033407	Soil	VKLTEPVIVSRKINAAKRRAAGKRIAANIRRLQRSRKTRTAGQALAEARGQRLAR
Ga0214472_101026794	3300033407	Soil	MKLSEPVIIARKIIASKRRAAGRRIAANIRRLQRMRGTRTAGQALAEARGERLAR
Ga0214471_101291373	3300033417	Soil	MKLSEPVIIARKIIASKRRAAGRRIAANIRRLQRMRGTRTAGQALAEARGERLARRWRSSWC
Ga0214471_101937442	3300033417	Soil	MKLSEPAIVARKIIPASRRAAGKRIAANIRRLQRRRGTRTAAQALAEARGERLAR
Ga0364928_0165889_102_269	3300033813	Sediment	MKVSEPVVIARKVVAAKRRAAGRRIAANIHRLQRIRGARTAGQALAEARGERLAR
Ga0364946_052464_312_479	3300033815	Sediment	MKVSEPVVIARKVVAAKRRAAGRRIAANIRRMKRIRSSRTAGQALAEARGERLAR
Ga0364938_015525_666_833	3300034114	Sediment	MKVSEPIVIARKVVAAKRRAAGRRIAANIHRLQRIRGARTAGQALAEARGERLAR
Ga0364929_0242716_355_522	3300034149	Sediment	MKVSEPLIIGRKVIAAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAH
Ga0364940_0052459_205_372	3300034164	Sediment	MKVSEPLIIARKIVAAKRRAAGKRIAANIRRLQRIRGARTAGQALAEARGERLAR
Ga0364940_0136298_136_303	3300034164	Sediment	VKINEPLIIGRRIDPAKRRAAGARIAANIRRLQKSKSKRTATRALAEARGQRLAR
Ga0364931_0216328_31_198	3300034176	Sediment	MRVSEPVIIARKVATAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR
Ga0364932_0182052_642_797	3300034177	Sediment	EPVVIARKVVAAKRRAAGRRIAANIRRMQRIRSSRTAGQALAEARGERLAR
Ga0364932_0412737_107_274	3300034177	Sediment	MKLTEPVIVARKIVPAKRRAAGRRIAANICRLQRIRTTRTAAQALAEARGERLAR
Ga0364943_0142065_197_364	3300034354	Sediment	MRVSEPVIIARKVVVAKRRAAGRRIAANIRRLQRIRGARTAGQALAEARGERLAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters