Metagenome / Metatranscriptome Family F064074

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064074
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	51 residues
Representative Sequence	SVPEQCVETAELADEVISRLTRNVRDERLFLALRDYTIASQACRREASP
Number of Associated Samples	104
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.75 %
% of genes near scaffold ends (potentially truncated)	89.92 %
% of genes from short scaffolds (< 2000 bps)	89.15 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.690 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.132 % of family members)
Environment Ontology (ENVO)	Unclassified (32.558 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.434 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.65% β-sheet: 0.00% Coil/Unstructured: 49.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.238.1.0: automated matches	d4atma_	4atm	0.83005
f.46.1.0: automated matches	d3lnnb_	3lnn	0.81998
a.118.8.0: automated matches	d6kp3a_	6kp3	0.81153
a.13.1.1: RAP domain	d2fcwa1	2fcw	0.80595
f.46.1.1: HlyD-like secretion proteins	d1vf7a_	1vf7	0.8044

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00037	Fer4	12.40
PF00296	Bac_luciferase	9.30
PF13411	MerR_1	3.88
PF00106	adh_short	2.33
PF00892	EamA	2.33
PF01406	tRNA-synt_1e	2.33
PF08240	ADH_N	1.55
PF13424	TPR_12	1.55
PF09278	MerR-DNA-bind	1.55
PF00581	Rhodanese	1.55
PF00860	Xan_ur_permease	0.78
PF14417	MEDS	0.78
PF00107	ADH_zinc_N	0.78
PF13472	Lipase_GDSL_2	0.78
PF13701	DDE_Tnp_1_4	0.78
PF11563	Protoglobin	0.78
PF01638	HxlR	0.78
PF04432	FrhB_FdhB_C	0.78
PF13340	DUF4096	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	9.30
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.33
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.33
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.33
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	1.55
COG1035	Coenzyme F420-reducing hydrogenase, beta subunit	Energy production and conversion [C]	0.78
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
All Organisms	root	All Organisms	40.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
cellular organisms	root	All Organisms → cellular organisms	40.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.93 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.55 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	6.20 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	1.55 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.55 %
Thermomicrobia incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis	0.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6.20 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Thermorudis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis → Thermorudis	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	6.20 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	1.55 %
Thermorudis peleae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis → Thermorudis → Thermorudis peleae	0.78 %
Phycicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus	0.78 %
Agromyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	6.20 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1.55 %
unclassified Phycicoccus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus	0.78 %
Agromyces protaetiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → Agromyces protaetiae	0.78 %
Thermorudis peleae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis → Thermorudis → Thermorudis peleae	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.69 %
Streptomyces sp. Tu6071	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	6.20 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1.55 %
Phycicoccus sp. HDW14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus → Phycicoccus sp. HDW14	0.78 %
Agromyces protaetiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → Agromyces protaetiae	0.78 %
Thermorudis peleae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis → Thermorudis → Thermorudis peleae	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_10448276	Not Available	524	Open in IMG/M
3300003373\|JGI25407J50210_10030671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	1392	Open in IMG/M
3300003373\|JGI25407J50210_10032407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1351	Open in IMG/M
3300004016\|Ga0058689_10167358	Not Available	518	Open in IMG/M
3300005186\|Ga0066676_10103326	Not Available	1733	Open in IMG/M
3300005562\|Ga0058697_10159781	Not Available	991	Open in IMG/M
3300005562\|Ga0058697_10493887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300005562\|Ga0058697_10698146	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005563\|Ga0068855_100921868	Not Available	922	Open in IMG/M
3300005843\|Ga0068860_102389596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300005981\|Ga0081538_10153260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1039	Open in IMG/M
3300005985\|Ga0081539_10104463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1437	Open in IMG/M
3300006049\|Ga0075417_10000708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8061	Open in IMG/M
3300006169\|Ga0082029_1209031	Not Available	563	Open in IMG/M
3300006844\|Ga0075428_100514407	Not Available	1280	Open in IMG/M
3300006844\|Ga0075428_101403926	Not Available	733	Open in IMG/M
3300006845\|Ga0075421_101750128	Not Available	670	Open in IMG/M
3300006847\|Ga0075431_101833308	All Organisms → cellular organisms → Bacteria → Terrabacteria group	563	Open in IMG/M
3300009100\|Ga0075418_11059941	Not Available	878	Open in IMG/M
3300009147\|Ga0114129_10619436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	1400	Open in IMG/M
3300009162\|Ga0075423_10356040	Not Available	1535	Open in IMG/M
3300009162\|Ga0075423_11538960	Not Available	714	Open in IMG/M
3300009837\|Ga0105058_1060917	Not Available	854	Open in IMG/M
3300009840\|Ga0126313_11203791	Not Available	624	Open in IMG/M
3300010037\|Ga0126304_10335473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	1004	Open in IMG/M
3300010037\|Ga0126304_10339269	Not Available	998	Open in IMG/M
3300010038\|Ga0126315_10045690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis → Thermorudis → Thermorudis peleae	2356	Open in IMG/M
3300010038\|Ga0126315_10422372	Not Available	841	Open in IMG/M
3300010040\|Ga0126308_10473555	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300010041\|Ga0126312_11386434	Not Available	521	Open in IMG/M
3300010042\|Ga0126314_10093816	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300010042\|Ga0126314_10381063	Not Available	1015	Open in IMG/M
3300010045\|Ga0126311_10762088	Not Available	778	Open in IMG/M
3300010045\|Ga0126311_11364900	Not Available	591	Open in IMG/M
3300010145\|Ga0126321_1237106	Not Available	559	Open in IMG/M
3300010146\|Ga0126320_1219274	Not Available	658	Open in IMG/M
3300010375\|Ga0105239_12476803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300010400\|Ga0134122_13135921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300011333\|Ga0127502_10319636	Not Available	513	Open in IMG/M
3300012939\|Ga0162650_100014412	Not Available	1072	Open in IMG/M
3300012941\|Ga0162652_100004952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1430	Open in IMG/M
3300012941\|Ga0162652_100071364	Not Available	592	Open in IMG/M
3300014488\|Ga0182001_10227275	Not Available	703	Open in IMG/M
3300014488\|Ga0182001_10341987	Not Available	625	Open in IMG/M
3300017997\|Ga0184610_1122925	Not Available	837	Open in IMG/M
3300018000\|Ga0184604_10256558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300018028\|Ga0184608_10134281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1058	Open in IMG/M
3300018031\|Ga0184634_10256688	Not Available	801	Open in IMG/M
3300018071\|Ga0184618_10342402	Not Available	637	Open in IMG/M
3300018072\|Ga0184635_10021264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2383	Open in IMG/M
3300018076\|Ga0184609_10286957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300018465\|Ga0190269_10966750	Not Available	638	Open in IMG/M
3300018465\|Ga0190269_11242200	Not Available	589	Open in IMG/M
3300018466\|Ga0190268_10410563	Not Available	876	Open in IMG/M
3300019254\|Ga0184641_1409628	Not Available	612	Open in IMG/M
3300019259\|Ga0184646_1307389	Not Available	622	Open in IMG/M
3300019269\|Ga0184644_1355166	Not Available	526	Open in IMG/M
3300019279\|Ga0184642_1104505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	1032	Open in IMG/M
3300019377\|Ga0190264_10872984	Not Available	698	Open in IMG/M
3300020005\|Ga0193697_1066712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	886	Open in IMG/M
3300021073\|Ga0210378_10093279	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1175	Open in IMG/M
3300021510\|Ga0222621_1030351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1111	Open in IMG/M
3300022195\|Ga0222625_1460579	Not Available	600	Open in IMG/M
3300022694\|Ga0222623_10023460	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300022756\|Ga0222622_10029285	All Organisms → cellular organisms → Bacteria	2915	Open in IMG/M
3300026656\|Ga0208578_101327	Not Available	623	Open in IMG/M
3300026673\|Ga0208847_101661	Not Available	640	Open in IMG/M
3300026790\|Ga0208710_103617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300027880\|Ga0209481_10000749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13101	Open in IMG/M
3300028589\|Ga0247818_10019193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4410	Open in IMG/M
3300028590\|Ga0247823_10430606	Not Available	995	Open in IMG/M
3300028592\|Ga0247822_10728259	Not Available	803	Open in IMG/M
3300028608\|Ga0247819_10226802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	1016	Open in IMG/M
3300028710\|Ga0307322_10142747	Not Available	634	Open in IMG/M
3300028713\|Ga0307303_10181089	Not Available	516	Open in IMG/M
3300028719\|Ga0307301_10045100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1349	Open in IMG/M
3300028719\|Ga0307301_10046326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	1332	Open in IMG/M
3300028721\|Ga0307315_10289504	Not Available	518	Open in IMG/M
3300028722\|Ga0307319_10177968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300028722\|Ga0307319_10223793	Not Available	617	Open in IMG/M
3300028744\|Ga0307318_10117883	Not Available	903	Open in IMG/M
3300028744\|Ga0307318_10179397	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300028744\|Ga0307318_10294811	Not Available	568	Open in IMG/M
3300028755\|Ga0307316_10016897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → Agromyces protaetiae	2303	Open in IMG/M
3300028771\|Ga0307320_10175256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	834	Open in IMG/M
3300028778\|Ga0307288_10453435	Not Available	527	Open in IMG/M
3300028793\|Ga0307299_10293252	Not Available	611	Open in IMG/M
3300028796\|Ga0307287_10010269	Not Available	3122	Open in IMG/M
3300028796\|Ga0307287_10324634	Not Available	581	Open in IMG/M
3300028809\|Ga0247824_10493554	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300028809\|Ga0247824_10545844	Not Available	689	Open in IMG/M
3300028810\|Ga0307294_10019959	Not Available	1756	Open in IMG/M
3300028811\|Ga0307292_10297091	Not Available	676	Open in IMG/M
3300028814\|Ga0307302_10015767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3397	Open in IMG/M
3300028819\|Ga0307296_10189036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1116	Open in IMG/M
3300030499\|Ga0268259_10054312	Not Available	824	Open in IMG/M
3300030513\|Ga0268242_1034057	Not Available	912	Open in IMG/M
3300030514\|Ga0268253_10376490	Not Available	509	Open in IMG/M
3300030516\|Ga0268255_10097418	Not Available	888	Open in IMG/M
3300030830\|Ga0308205_1036563	Not Available	618	Open in IMG/M
3300030989\|Ga0308196_1031716	Not Available	667	Open in IMG/M
3300031058\|Ga0308189_10266158	Not Available	654	Open in IMG/M
3300031092\|Ga0308204_10148196	Not Available	694	Open in IMG/M
3300031097\|Ga0308188_1032698	Not Available	543	Open in IMG/M
3300031098\|Ga0308191_1022510	Not Available	636	Open in IMG/M
3300031114\|Ga0308187_10281973	Not Available	616	Open in IMG/M
3300031548\|Ga0307408_100074414	All Organisms → cellular organisms → Bacteria	2520	Open in IMG/M
3300031548\|Ga0307408_102009986	Not Available	556	Open in IMG/M
3300031824\|Ga0307413_10066978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2243	Open in IMG/M
3300031824\|Ga0307413_10775641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	803	Open in IMG/M
3300031901\|Ga0307406_10040652	All Organisms → cellular organisms → Bacteria	2892	Open in IMG/M
3300031903\|Ga0307407_10274790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	1164	Open in IMG/M
3300031903\|Ga0307407_10868504	Not Available	690	Open in IMG/M
3300031911\|Ga0307412_10953889	Not Available	755	Open in IMG/M
3300032002\|Ga0307416_100781614	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300032002\|Ga0307416_102980236	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300032004\|Ga0307414_10283120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	1394	Open in IMG/M
3300032004\|Ga0307414_10747732	Not Available	888	Open in IMG/M
3300032005\|Ga0307411_10640915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	919	Open in IMG/M
3300032080\|Ga0326721_10230097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	996	Open in IMG/M
3300032080\|Ga0326721_10500842	Not Available	723	Open in IMG/M
3300032126\|Ga0307415_101434019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus → Phycicoccus sp. HDW14	658	Open in IMG/M
3300032159\|Ga0268251_10583224	Not Available	512	Open in IMG/M
3300032159\|Ga0268251_10593033	Not Available	508	Open in IMG/M
3300034026\|Ga0334946_064329	Not Available	616	Open in IMG/M
3300034174\|Ga0334932_093653	Not Available	526	Open in IMG/M
3300034354\|Ga0364943_0102067	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300034377\|Ga0334931_171526	Not Available	527	Open in IMG/M
3300034680\|Ga0370541_029526	Not Available	655	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.99%
Host-Associated	Host-Associated	31.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.26%
Plants	Host-Associated → Plants	31.01%
Aquatic	Environmental → Aquatic	14.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.38%
Sediment	Environmental → Aquatic → Sediment	7.75%
Freshwater	Environmental → Aquatic → Freshwater	6.98%
Phylloplane	Host-Associated → Plants → Phylloplane	5.43%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.33%
Roots	Host-Associated → Plants → Roots	2.33%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.55%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.75%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.33%
Loam	Environmental → Terrestrial → Soil → Loam	2.33%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.33%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.33%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.55%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.75%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.33%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.33%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.55%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.43%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.43%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.65%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.33%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.33%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.55%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026656	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN577 (SPAdes)	Environmental	Open in IMG/M
3300026673	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1116 (SPAdes)	Environmental	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031097	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031098	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_104482761	3300000953	Soil	RPKPRTVVSVPDDCLEAAQLADEVISRLNRNNRDNRLALALRDYTIASQACRREASP*
JGI25407J50210_100306711	3300003373	Tabebuia Heterophylla Rhizosphere	TAPETVIVTKVSVPETCVDTARLADDIIARLTRNQRDNRLALALTDYSIASQACRREASP
JGI25407J50210_100324075	3300003373	Tabebuia Heterophylla Rhizosphere	ETVIRTKTSVPESCLDTAEHGDEVIARLNRNQRDNRLFLALRDYTIASQACRKEASP*
Ga0058689_101673582	3300004016	Agave	PSTVVPDDCLETAELADEVISRLIRNNRDNRLALALRDYTVASQACRREASP*
Ga0066676_101033262	3300005186	Soil	ELADEVIARLNRNQRDNRLAEMLRDYTIASQNCRRAASP*
Ga0058697_101597811	3300005562	Agave	AAAPPFLRTRPKVPEPCLDAAELADEVIARLNRNQRDNRLALALSDYTIASQNCRRAASP
Ga0058697_104938872	3300005562	Agave	ARVPEECLDATELADEVIARLNRNQRDNTLALVLRDYSVASQACRRESTAAP*
Ga0058697_106981462	3300005562	Agave	AAELADEVISRLTRNIRDNRLAAVLRDYTIASQACRRAASP*
Ga0068855_1009218681	3300005563	Corn Rhizosphere	QTVTSVPQQCVETAELADEVISRLNRNVRDERLFLALRNYTIASQACRRQASP*
Ga0068860_1023895962	3300005843	Switchgrass Rhizosphere	AVPSTTHAAVTQTVTSVPQQCVETAELADEVISRLNRNVRDERLFLALRDYTIASQACRRQASP*
Ga0081538_101532603	3300005981	Tabebuia Heterophylla Rhizosphere	TAQLGDEVIARLNRNIRDNRLFLALRDYTIASQACRKEASP*
Ga0081539_101044632	3300005985	Tabebuia Heterophylla Rhizosphere	VRTFQVPEACVDATELADEVIARLNRKQRDNALALRDYSVASQACRREAAP*
Ga0075417_1000070812	3300006049	Populus Rhizosphere	TVTSVPQTCVETAELADEVISRLNRNDRDNRLAEMLRDYTINSQACRREAQP*
Ga0082029_12090311	3300006169	Termite Nest	EACLDATELGDEVIARLNRNQRDNRLILALRDYTIASQACRREALP*
Ga0075428_1005144071	3300006844	Populus Rhizosphere	VIRTRTSVPEACLEAAELGDEVIARLTRNQRDNRLFPALRKYTIASQACRKQASP*
Ga0075428_1014039262	3300006844	Populus Rhizosphere	AELADEVISRLNRNNRDNRLALALRDYTIASQACRREASP*
Ga0075421_1017501281	3300006845	Populus Rhizosphere	KTVTSVPQTCVETAELADEVISRLNRNDRDNRLAEMLRDYTINSQACRREAQP*
Ga0075431_1018333082	3300006847	Populus Rhizosphere	SVPEACLDTAKLGDEVIARLTSNQRDNRLFPALRKYTIASQACRREASP*
Ga0075418_110599413	3300009100	Populus Rhizosphere	AELADEVISRLNRNDRDNRLAEMLRDYTINSQACRREAQP*
Ga0114129_106194361	3300009147	Populus Rhizosphere	TTTAKPPPPQTVVSVPEQCVETAELGDEVISRLNRNIRDERLFLALRDYTIASQACRREASP*
Ga0075423_103560401	3300009162	Populus Rhizosphere	VIRTRTSVPEACLEAAELGDEVIARLTRNQRDNRLFPALRKYTIASQACRREASP*
Ga0075423_115389601	3300009162	Populus Rhizosphere	PEACLEAAELGDEVIARLTRNQRDNHLFPALRKYTIASQACRKQASP*
Ga0105058_10609173	3300009837	Groundwater Sand	PEECLETAEWGDEVIARLNRKIRDDRLVLALREYTVASQACRKEASLDG*
Ga0126313_112037911	3300009840	Serpentine Soil	ELADEVISRLTRNIRDNRLAEMLRDYTIASQACRREASP*
Ga0126304_103354733	3300010037	Serpentine Soil	EAAELADEVISRLNRNIRDERLFLALRDYTIASQACRREASP*
Ga0126304_103392691	3300010037	Serpentine Soil	TTTKPTPRTVVSVPEQCVETAELADEVISRLTRNIRDERLFLALRDYTIASQACRREASP
Ga0126315_100456904	3300010038	Serpentine Soil	SPDPRSRKVPDACVDSVELADEVISRLTRNVRDNRLAETLRAYTIASPACRRAASP*
Ga0126315_104223723	3300010038	Serpentine Soil	EECLEAAELADEVISRLNRGQRDNTLALDLRDYSVASQACRREASP*
Ga0126308_104735553	3300010040	Serpentine Soil	DEVISRLTRNERDNRLAEILRDYTIASQACRREASP*
Ga0126312_113864342	3300010041	Serpentine Soil	ATELADEVIARLNRKQRDNALALALRDYSVASQACRREATR*
Ga0126314_100938164	3300010042	Serpentine Soil	ELSDEVIARLNRNERDERLFLALRGYTIASQRCRRAATP*
Ga0126314_103810633	3300010042	Serpentine Soil	RTVVSVPEQCVETAELADEVISRLTRNIRDERLFLALRDYTIASQACRREASP*
Ga0126311_107620882	3300010045	Serpentine Soil	LADEVIARLNRNQRDNRLSVALRDYTIASQNCRRAASP*
Ga0126311_113649002	3300010045	Serpentine Soil	KTVPSVPEECLEAAELADEVISRLNRGQRDNTLALDLRDYSVASQACRREASP*
Ga0126321_12371061	3300010145	Soil	QAQATPTTRPKVRTVVSVPDDCLETSELADEVISRLNRNNRDNRLAEMLRDYTIASQACRREASP*
Ga0126320_12192741	3300010146	Soil	KPKTSVPESCVETAELADEVISRLDRNDRDQRLFLALRDYTIASQACRREASS*
Ga0105239_124768031	3300010375	Corn Rhizosphere	TQTVTSVPQQCVETAELADEVISRLNRNVRDERLFLALRDYTIASQACRRQASP*
Ga0134122_131359212	3300010400	Terrestrial Soil	TVTSVPQQCVETAELADEVIAKLNRNVRDKRLFLALRDYTIASQACRRQASP*
Ga0127502_103196361	3300011333	Soil	TPPETVTVPSVPEQCVETAELADEVISRLNRNIRDERLFLALRDYTIASQACRREASP*
Ga0162650_1000144123	3300012939	Soil	VTKTVVSVPEQCIETAELGDEVISRLNRNVRDERLFLALRDYNIASQACRREASP*
Ga0162652_1000049521	3300012941	Soil	AVPSTTQPVPARTVTSVPEQCLKTAELADEVISRMNRNIRDKRLFLALRDYTIASQACRREASP*
Ga0162652_1000713641	3300012941	Soil	PTVRGPTVVSVPEECVDAAELADEVISRLNRNDRDNRLALALRDYTIASQACRREASP*
Ga0182001_102272752	3300014488	Soil	VTRTVPSVPEECVDAAELADEVIARLNRNQRDNTLALRLRDYSVASQACRREASS*
Ga0182001_103419872	3300014488	Soil	VDTAELADEVISRLNRNVRDERLFLALRDYTIASQACRREASP*
Ga0184610_11229252	3300017997	Groundwater Sediment	TVTRTVTSVPEQCVEAAELADEVIGRLNRNVRDKRLFLALRDYTIASQACRREASP
Ga0184604_102565581	3300018000	Groundwater Sediment	TVTVTRTVTSVPEQCVETAELADEVIGRLNRNVRDKRLFLALRDYTIASQACRREASP
Ga0184608_101342811	3300018028	Groundwater Sediment	CVETAELADEVISRLNRNVRDQRLFQALRDYTVASQACRREASS
Ga0184634_102566883	3300018031	Groundwater Sediment	VTKTEVSVPEQCVETAELADEVISRLNRNVRDERLFLALRDYTIASQACRREASP
Ga0184618_103424021	3300018071	Groundwater Sediment	TVTKTVVSVPEQCVETAELADEVISRLNRNVRDERLFLALRDYTIASQACRREASP
Ga0184635_100212644	3300018072	Groundwater Sediment	VPEQCAKTVELADEVISRLNRNVRDERLFLALRDYTIASQACRREASP
Ga0184609_102869571	3300018076	Groundwater Sediment	AKPKVVTRVTVPASCVDTAELADEVISRLNRNDRDQRLFVALRDYTVASQACRREASP
Ga0190269_109667502	3300018465	Soil	VETSTTVAPRPQVSVPEECVETAELADEVISRLNRNNRDNRLALALRDYTIASQACRREASP
Ga0190269_112422003	3300018465	Soil	TVIRTKASVPEACLEAAELGDEVIARLTRNQRDNRLFLALRKYTIASQACRREASP
Ga0190268_104105631	3300018466	Soil	ATQATRTRTVVSVPEACVDAAELADEVISRLNRNDRDNRLALALRDYTIASQACRREASP
Ga0184641_14096281	3300019254	Groundwater Sediment	TAELADEVISRLNRNDRDNRLAEMLRDYTINSQACRREASP
Ga0184646_13073891	3300019259	Groundwater Sediment	SVPESCLTAAELADEVISRLDRNVRDQRLFLALRDYTIASQACRREASS
Ga0184644_13551662	3300019269	Groundwater Sediment	VSVPEQCVETAELGDEVISRLTRNVRDERLFLALRDYTIASQACRREASP
Ga0184642_11045051	3300019279	Groundwater Sediment	KPKASVPESCVNAAELADEVISRLDRNVRDQRLFLALRDYTIASQACRREASS
Ga0190264_108729841	3300019377	Soil	TTPEPRTVVSVPEQCVETAELADEVISRLNRNIRDERLFLALRDYTVASQACRREASP
Ga0193697_10667122	3300020005	Soil	VAHVPEACLDAAELADEVISRLNRNDRDNRLALALRDYTIASQACRREAAPTTEKAEP
Ga0210378_100932791	3300021073	Groundwater Sediment	SVPEACLDTARLGDEVIARLTRNQRDNRLFLALRKYTIASQACRREASP
Ga0222621_10303511	3300021510	Groundwater Sediment	IVTRTVTSVPQQCVETAELADEVIAKLNRNVRDKRLFLALRDYTIASQACRRQASP
Ga0222625_14605792	3300022195	Groundwater Sediment	CVDAAELADEVISRLDRNDRDQRLFLALRDYTIASQACRREASS
Ga0222623_100234602	3300022694	Groundwater Sediment	VVSVPEECVDAAELADEVISRLDRNDRDNRLALALRDYTIASQACRREASP
Ga0222622_100292851	3300022756	Groundwater Sediment	PPKTRISVPETCVETAELADEVISRLNRNDRDNRLAEMLRDYTINSQACRREASP
Ga0208578_1013271	3300026656	Soil	DCLEAAQLADEVISRLNRNNRDNRLALALRDYTIASQACRREASP
Ga0208847_1016611	3300026673	Soil	ATSRAPATTPPPPATVIKTETSVPQTCEDTAELADEVISRLTRNIRDNRLAEMLRDYTIASQACRREASP
Ga0208710_1036171	3300026790	Soil	VVSVPDDCLETSELADEVISRLNRNNRDNRLAEMLRDYTIASQACRREASP
Ga0209481_1000074916	3300027880	Populus Rhizosphere	PPPRATAPPKTVTSVPQTCVETAELADEVISRLNRNDRDNRLAEMLRDYTINSQACRREAQP
Ga0247818_100191936	3300028589	Soil	SVPQQCVETAELADEVISRLNRNVRDERLFLALRDYTIASQACRRQASP
Ga0247823_104306063	3300028590	Soil	TVVSVPEQCVETAELADEVISRLNRNIRDERLFLALRDYTIASQACRREASP
Ga0247822_107282591	3300028592	Soil	ATPPTGRGPTVVSVPEECVDAAELADEVISRLNRNNRDNRLALALRDYTIASQACRREAS
Ga0247819_102268021	3300028608	Soil	LGDEVISRLNRNIRDERLFLALRDYTIASQACRREASP
Ga0307322_101427471	3300028710	Soil	PPPRATVIKTRTSVPETCVETAELADEVISRLNRNDRDNRLAEMLRDYTINSQACRREAS
Ga0307303_101810892	3300028713	Soil	VPVKVPQACVEAADLADQVISRLDRNVRDRRLFVTLRDYTIASQACRREAASS
Ga0307301_100451003	3300028719	Soil	TVIVTRTVTSVPQQCVETAELADEVIAKLNRNVRDKRLFLALRDYTIASQACRRQASP
Ga0307301_100463264	3300028719	Soil	ASPKPRTSVPESCVNAAELADEVISRLDRNVRDQRLFLALRDYTIASQACRREASS
Ga0307315_102895042	3300028721	Soil	VPESCLTAAELADEVISRLDRNVRDQRLFLALRDYTIASQACRREASS
Ga0307319_101779681	3300028722	Soil	AELADEVISRLNRNVRDQRLFQALRDYTVASQACRREASS
Ga0307319_102237931	3300028722	Soil	TAPPKPKTSVPESCVNAAELADEVISRLDRNVRDQRLFLALRDYTIASQACRREASS
Ga0307318_101178833	3300028744	Soil	APPPPATVIKTRTSVPETCVETAELADEVISRLNRNDRDNRLAEMLRDYTINSQACRREASP
Ga0307318_101793971	3300028744	Soil	TSVPEACLEATKLGDEVIVRLTRNQRDNRLFAALRKYTIASQACRREASP
Ga0307318_102948111	3300028744	Soil	DEVISRLNRNDRDNRLALALRDYTIASQACRREASP
Ga0307316_100168973	3300028755	Soil	VIVTRTVTSVPQQCVETAELADEVIAKLNRNVRDKRLFLALRDYTIASQACRRQASP
Ga0307320_101752561	3300028771	Soil	PAPPETVIRTKTSVPEACLDTAKLGDEVIARLTRNQRDNRLFPALRKYTIASQACRREAS
Ga0307288_104534352	3300028778	Soil	TTTAEPTPPRPVVSVPEQCVETAELGDEVISRLTRNVRDERLFLALRDYTIASQACRREASP
Ga0307299_102932522	3300028793	Soil	TLAPDPTATPKPRTSVPESCLTAAELADEVISRLDRNVRDQRLFLALRDYTIASQACRREASS
Ga0307287_100102692	3300028796	Soil	VPPAPPETVIRTKTSVPEVCLDTAKLGDEVIARLTRNQRDNRLFLALRKYTIASQACRREASP
Ga0307287_103246342	3300028796	Soil	DEVISRLDRNDRDQRLFLALRDYTVASQACRREASS
Ga0247824_104935541	3300028809	Soil	KTSVPEACLEAAELGDEVIARLTRNQRDDRLFLALRKYTIASQACRREASP
Ga0247824_105458441	3300028809	Soil	CVETAELGDEVISRLNRNIRDERLFLALRDYTIASQACRKEASP
Ga0307294_100199594	3300028810	Soil	PEQCVETAELADEVISRLNRNVRDERLFLALRDYTIASQACRREASP
Ga0307292_102970912	3300028811	Soil	ELADEVISRLTRNVRDERLFLALRDYTIASQACRREASP
Ga0307302_100157675	3300028814	Soil	VPEQCALTVELADEVISRLNRNVRDERLFLALRDYTIASQACRREASP
Ga0307296_101890362	3300028819	Soil	SSTVIVTRTVTSVPQQCVETAELADEVIAKLNRNVRDKRLFLALRDYTIASQACRRQASP
Ga0268259_100543123	3300030499	Agave	ETAELADEVISRLIRNNRDNRLALALRDYTVASQACRREASP
Ga0268242_10340573	3300030513	Soil	QEVRTVVSVPEECVDTAELADEVISRLNRNVRDERLFLALRDYTIASQACRREASP
Ga0268253_103764901	3300030514	Agave	AELADEVISRLNRNNRDNRLAEMLRDYTIASQACRREVSP
Ga0268255_100974181	3300030516	Agave	SQPKAAPKTVTSVPETCKETAELADEVISRLTRNIRDNRLAEVLRDYTIASQACRREASP
Ga0308205_10365632	3300030830	Soil	VPEQCVETAELADEVISRLTRNVRDERLFLALRDYTIASQACRREASP
Ga0308196_10317161	3300030989	Soil	EPTPSVKPKTSVPESCVNAAELADEVISRLDRNVRDQRLFLALRDYTIASQACRREASS
Ga0308189_102661581	3300031058	Soil	PKPRTSVPESCLTAAELADEVISRLDRNVRDQRLFLALRDYTIASQACRREASS
Ga0308204_101481961	3300031092	Soil	PSAAPDPTASPKPRTSVPESCVNAAELADEVISRLDRNDRDQRLFLALRDYTIASQACRREASS
Ga0308188_10326981	3300031097	Soil	SVPEQCVETAELADEVISRLTRNVRDERLFLALRDYTIASQACRREASP
Ga0308191_10225101	3300031098	Soil	PRTSVPESCLTAAELADEVISRLDRNVRDQRLFLALRDYTIASQACRREASS
Ga0308187_102819731	3300031114	Soil	LADEVISRLDRNDRDQRLFLALRDYTVASQACRREASS
Ga0307408_1000744146	3300031548	Rhizosphere	VRTVVSVPEECVDAAELADEVISRLDRNVRDERLFLALRDYTIASQACRREASP
Ga0307408_1020099862	3300031548	Rhizosphere	NECVDAAELADEVIARLNRNQRDNTLALALRDYSVASQACRREASS
Ga0307413_100669784	3300031824	Rhizosphere	DEVIGRLNRNVRDERLFLALRDYTIASQACRRAASP
Ga0307413_107756412	3300031824	Rhizosphere	DAAELADEVIARLNRNQRDSRLALALRDYSVASQACRRAAR
Ga0307406_100406521	3300031901	Rhizosphere	DTAELADEVISRLNRNVRDERLFLALRDYTIASQACRREASP
Ga0307407_102747904	3300031903	Rhizosphere	TVTKTVPSVPEECLEAAELADEVISRLNRGQRDNTLALDLRDYSVASQACRREASP
Ga0307407_108685042	3300031903	Rhizosphere	IVSPQTKVQIQVPDACLDAQELADEVISRLNRNVRDQRLFAALRDYTIASQACRRAASP
Ga0307412_109538893	3300031911	Rhizosphere	TAELADEVISRLTRNIRDERLFLALRDYTIASQACRREASP
Ga0307416_1007816141	3300032002	Rhizosphere	APPETVIRTRTSVPEACLDTAKLGDEVIARLTRNQRDNRLFLALRKYTIASQACRREASP
Ga0307416_1029802361	3300032002	Rhizosphere	AKVPDACVDSVELADEVISRLTRNVRDNRLAETLRAYTIASPACRRAASP
Ga0307414_102831204	3300032004	Rhizosphere	ETSELADEVISRLNRNNRDNRLAEMLRDYTIASQACRREASP
Ga0307414_107477321	3300032004	Rhizosphere	STTRPTPARTVTSVPEQCVETAELADEVIGRLNRNVRDERLFLALRDYTIASQACRRAAS
Ga0307411_106409153	3300032005	Rhizosphere	APPPSTVTKTVPSVPEECLEAAELADEVISRLNRGQRDNTLALDLRDYSVASQACRREAS
Ga0326721_102300973	3300032080	Soil	CVDAAELADEVIARLNRNQRDNTLALRLRDYSVASQACRREASS
Ga0326721_105008421	3300032080	Soil	TTPEPRTVVSVPEQCVETAELADEVISRLNRNIRDERLFLALRDYTIASQACRREASP
Ga0307415_1014340191	3300032126	Rhizosphere	DQVIARLNRNQRDNVLALDLRDYAVASQACRREAGRQPRAG
Ga0268251_105832241	3300032159	Agave	PQACIDAADLADEVISKLDRNDRDQRLFSALRDYTIASQACRKEASP
Ga0268251_105930332	3300032159	Agave	LADEVISRLNRNNRDNRLAEMLRDYTIASQACRREASP
Ga0334946_064329_36_191	3300034026	Sub-Biocrust Soil	LTSVPEVCLEAAQLADEVISALNRNQRNDRLALTLRDWSIANQACRREASP
Ga0334932_093653_394_525	3300034174	Sub-Biocrust Soil	LETAELADEVISRLNRNDRDNRLALALRDYTIASQACRREASP
Ga0364943_0102067_14_160	3300034354	Sediment	VPEVCLEATKLGDEVIARLTRNERDNRLFLALRKYTIASQACRREASP
Ga0334931_171526_118_264	3300034377	Sub-Biocrust Soil	VPDDCLETAELADEVISRLNRNNRDNRLALVLRDYTIASQACRREASP
Ga0370541_029526_491_655	3300034680	Soil	PKPKTSVPESCVDAAELADEVISRLDRNVRDQRLFLALRDYTIASQACRREASS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064074

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences