Metagenome / Metatranscriptome Family F063976

Overview

Basic Information

• Family ID: F063976
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 129
• Average Sequence Length: 40 residues
• Representative Sequence: GMGVPDAGDSSVEKTVRYPNGGKPLVVVYHDGKAAEIKPGT
• Number of Associated Samples: 117
• Number of Associated Scaffolds: 129

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.78 %
• % of genes near scaffold ends (potentially truncated): 97.67 %
• % of genes from short scaffolds (< 2000 bps): 87.60 %
• Associated GOLD sequencing projects: 113
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (91.473 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.054 % of family members)
• Environment Ontology (ENVO): Unclassified (27.132 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (56.589 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 27.54%
  Coil/Unstructured: 72.46%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00578	AhpC-TSA	17.05
PF13618	Gluconate_2-dh3	8.53
PF01872	RibD_C	7.75
PF01502	PRA-CH	6.98
PF07702	UTRA	5.43
PF00196	GerE	3.10
PF06841	Phage_T4_gp19	3.10
PF00871	Acetate_kinase	2.33
PF13559	DUF4129	1.55
PF01634	HisG	1.55
PF06857	ACP	0.78
PF16217	M64_N	0.78
PF00326	Peptidase_S9	0.78
PF13193	AMP-binding_C	0.78
PF07726	AAA_3	0.78
PF00069	Pkinase	0.78
PF00005	ABC_tran	0.78
PF08029	HisG_C	0.78
PF07238	PilZ	0.78
PF00155	Aminotran_1_2	0.78
PF02837	Glyco_hydro_2_N	0.78
PF10110	GPDPase_memb	0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	7.75
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	7.75
COG0139	Phosphoribosyl-AMP cyclohydrolase	Amino acid transport and metabolism [E]	6.98
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.10
COG0040	ATP phosphoribosyltransferase	Amino acid transport and metabolism [E]	2.33
COG0282	Acetate kinase	Energy production and conversion [C]	2.33
COG3426	Butyrate kinase	Energy production and conversion [C]	2.33
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.78

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.47 %
Unclassified	root	N/A	8.53 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.47 %
Unclassified	root	N/A	8.53 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.47 %
Unclassified	root	N/A	8.53 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.32 %
Unclassified	root	N/A	8.53 %

Level 5

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	51.16 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.40 %
Unclassified	root	N/A	8.53 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.16 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.40 %
Unclassified	root	N/A	8.53 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.16 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.40 %
Unclassified	root	N/A	8.53 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.16 %
Unclassified	root	N/A	8.53 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.65 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.55 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.16 %
Unclassified	root	N/A	8.53 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.88 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.55 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2199352024|deeps__Contig_152706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548
3300001867|JGI12627J18819_10466657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517
3300004080|Ga0062385_10227190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025
3300004152|Ga0062386_101870923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501
3300005167|Ga0066672_10440755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851
3300005436|Ga0070713_100996372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808
3300005439|Ga0070711_100025033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3901
3300005577|Ga0068857_101761256	Not Available	606
3300005586|Ga0066691_10111192	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1548
3300005602|Ga0070762_10991508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576
3300005712|Ga0070764_10921060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548
3300005921|Ga0070766_10700456	Not Available	686
3300006059|Ga0075017_100675879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793
3300006086|Ga0075019_10257794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042
3300006173|Ga0070716_101609721	All Organisms → cellular organisms → Bacteria	534
3300006176|Ga0070765_100893678	All Organisms → cellular organisms → Bacteria	840
3300006358|Ga0068871_101514235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634
3300006804|Ga0079221_11079039	Not Available	612
3300006904|Ga0075424_102868014	All Organisms → cellular organisms → Bacteria → Acidobacteria	501
3300007982|Ga0102924_1055833	All Organisms → cellular organisms → Bacteria	2264
3300007982|Ga0102924_1269612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692
3300009012|Ga0066710_104332653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530
3300009088|Ga0099830_10307507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267
3300009089|Ga0099828_11600039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574
3300009522|Ga0116218_1041348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2085
3300009548|Ga0116107_1142308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668
3300009552|Ga0116138_1240605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501
3300009792|Ga0126374_10821466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712
3300010362|Ga0126377_10407297	All Organisms → cellular organisms → Bacteria	1372
3300010379|Ga0136449_100432328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2319
3300010876|Ga0126361_11269915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990
3300012189|Ga0137388_11747044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555
3300012351|Ga0137386_10487754	All Organisms → cellular organisms → Bacteria → Acidobacteria	888
3300014169|Ga0181531_10208224	All Organisms → cellular organisms → Bacteria	1189
3300014658|Ga0181519_10068293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2334
3300016422|Ga0182039_10559187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995
3300016445|Ga0182038_12156028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505
3300017823|Ga0187818_10506686	All Organisms → cellular organisms → Bacteria	542
3300017930|Ga0187825_10388233	Not Available	534
3300017936|Ga0187821_10257431	All Organisms → cellular organisms → Bacteria	683
3300017955|Ga0187817_11099023	All Organisms → cellular organisms → Bacteria	510
3300017959|Ga0187779_10464657	All Organisms → cellular organisms → Bacteria	833
3300017972|Ga0187781_10099866	All Organisms → cellular organisms → Bacteria	2014
3300017972|Ga0187781_10373037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1017
3300017973|Ga0187780_11133034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572
3300017975|Ga0187782_10276606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1265
3300017975|Ga0187782_11592627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516
3300018007|Ga0187805_10393250	All Organisms → cellular organisms → Bacteria	643
3300018025|Ga0187885_10368192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646
3300018037|Ga0187883_10771993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502
3300018085|Ga0187772_11177543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564
3300018088|Ga0187771_10415759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1135
3300020580|Ga0210403_10153088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1886
3300020582|Ga0210395_10578505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843
3300021088|Ga0210404_10863633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517
3300021171|Ga0210405_10544572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907
3300021178|Ga0210408_10316475	All Organisms → cellular organisms → Bacteria	1244
3300021180|Ga0210396_11020265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700
3300021401|Ga0210393_10952577	All Organisms → cellular organisms → Bacteria → Acidobacteria	696
3300021404|Ga0210389_10206984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1531
3300021405|Ga0210387_11856984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506
3300021420|Ga0210394_11463389	All Organisms → cellular organisms → Bacteria	579
3300021432|Ga0210384_11369634	All Organisms → cellular organisms → Bacteria	612
3300021475|Ga0210392_10517632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880
3300021479|Ga0210410_10473641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1119
3300021479|Ga0210410_10660138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926
3300021479|Ga0210410_11788355	Not Available	509
3300021559|Ga0210409_10595805	All Organisms → cellular organisms → Bacteria → Acidobacteria	973
3300021559|Ga0210409_10775454	All Organisms → cellular organisms → Bacteria → Acidobacteria	831
3300021560|Ga0126371_13784740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510
3300021560|Ga0126371_13846833	All Organisms → cellular organisms → Bacteria	506
3300021861|Ga0213853_11102776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702
3300022533|Ga0242662_10303882	All Organisms → cellular organisms → Bacteria	533
3300022732|Ga0224569_100208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4832
3300024225|Ga0224572_1100488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534
3300025404|Ga0208936_1015694	All Organisms → cellular organisms → Bacteria	956
3300025509|Ga0208848_1072551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716
3300025905|Ga0207685_10545757	All Organisms → cellular organisms → Bacteria	616
3300025910|Ga0207684_11037894	Not Available	684
3300025928|Ga0207700_11117111	All Organisms → cellular organisms → Bacteria	705
3300026557|Ga0179587_10529789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774
3300026916|Ga0208066_100998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780
3300027297|Ga0208241_1008081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1435
3300027502|Ga0209622_1052975	All Organisms → cellular organisms → Bacteria	737
3300027619|Ga0209330_1004923	All Organisms → cellular organisms → Bacteria → Acidobacteria	3059
3300027652|Ga0209007_1159005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560
3300027821|Ga0209811_10179064	All Organisms → cellular organisms → Bacteria	795
3300027821|Ga0209811_10274501	Not Available	646
3300027853|Ga0209274_10052884	All Organisms → cellular organisms → Bacteria	1931
3300027867|Ga0209167_10002615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9670
3300027867|Ga0209167_10525400	All Organisms → cellular organisms → Bacteria	648
3300027884|Ga0209275_10636323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613
3300027889|Ga0209380_10222965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107
3300027908|Ga0209006_11319957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557
3300028789|Ga0302232_10022045	All Organisms → cellular organisms → Bacteria	3584
3300028882|Ga0302154_10500759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578
3300028906|Ga0308309_11147933	Not Available	671
3300028909|Ga0302200_10250635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865
3300029636|Ga0222749_10316282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810
3300029903|Ga0247271_130294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551
3300030058|Ga0302179_10068207	All Organisms → cellular organisms → Bacteria → Acidobacteria	1581
3300030597|Ga0210286_1193243	Not Available	615
3300030617|Ga0311356_10799343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896
3300030618|Ga0311354_11087344	All Organisms → cellular organisms → Bacteria	731
3300030991|Ga0073994_10003803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676
3300031028|Ga0302180_10202074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1068
3300031231|Ga0170824_105322944	Not Available	548
3300031231|Ga0170824_124599542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1037
3300031258|Ga0302318_10261891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850
3300031525|Ga0302326_10391333	All Organisms → cellular organisms → Bacteria	2161
3300031708|Ga0310686_109818257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824
3300031715|Ga0307476_10014770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4965
3300031715|Ga0307476_10558669	All Organisms → cellular organisms → Bacteria → Acidobacteria	848
3300031715|Ga0307476_11230238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548
3300031719|Ga0306917_10994511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655
3300031823|Ga0307478_11750614	All Organisms → cellular organisms → Bacteria → Acidobacteria	511
3300031941|Ga0310912_11045962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625
3300031996|Ga0308176_10043836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3612
3300032174|Ga0307470_10834230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717
3300032180|Ga0307471_101356949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872
3300032515|Ga0348332_14717542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681
3300032805|Ga0335078_10021202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9669
3300032893|Ga0335069_10564122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1311
3300032897|Ga0335071_10008208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10735
3300032898|Ga0335072_10115286	All Organisms → cellular organisms → Bacteria → Acidobacteria	3392
3300033405|Ga0326727_10283093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1659
3300033412|Ga0310810_11231213	Not Available	601
3300033433|Ga0326726_10634109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029
3300034163|Ga0370515_0400362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.12%
Host-Associated	Host-Associated	3.88%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.40%
Aquatic	Environmental → Aquatic	14.73%
Plants	Host-Associated → Plants	3.88%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.09%
Freshwater	Environmental → Aquatic → Freshwater	11.63%
Peat	Environmental → Terrestrial → Peat	8.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.55%
Sediment	Environmental → Aquatic → Sediment	1.55%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.74%
Loam	Environmental → Terrestrial → Soil → Loam	16.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.05%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.10%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.33%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.55%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.55%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2199352024	Bare-fallow DEEP SOIL	Environmental
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022732	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1	Host-Associated
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental
3300026916	Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN109 (SPAdes)	Environmental
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental
3300030597	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE046SO (Eukaryote Community Metatranscriptome)	Environmental
3300030617	II_Palsa_N2 coassembly	Environmental
3300030618	II_Palsa_E3 coassembly	Environmental
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_02805270	2199352024	Soil	MGVPAPGSERVLRYPNGGHPLVVTYENGVATRISPG
JGI12627J18819_104666571	3300001867	Forest Soil	DFAVGMGVPDVGDTSYSKTVRYPNGGKPLVITYHDGKAAEIKAGS*
Ga0062385_102271902	3300004080	Bog Forest Soil	DFAIGMGVPDAGSSSYEKNVRYPNGGKPLVVVYHDGKAAEIKTGSP*
Ga0062386_1018709232	3300004152	Bog Forest Soil	MGVPDAGDTSYEKTVRYPNGGKSLVVVYHDGKAAEIEPGS*
Ga0066672_104407551	3300005167	Soil	FAIGMGVPDGGDTSYQKTVHYPNGGKPLVIVYHEGKAAEINPGTPPS*
Ga0070713_1009963721	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GVPDAGSSTSDKTVHYPNGGKPLVIIYHEGKAVEIKPGSSPS*
Ga0070711_1000250331	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IGMGVPDAGDTSYSKTVRYPNGGNPLVIVYHDGRAAEIKPGTPAS*
Ga0068857_1017612561	3300005577	Corn Rhizosphere	RPDAGSSSEEKTVHYPNGGKPLVVVYHRDKAAEIKPDSAGS*
Ga0066691_101111921	3300005586	Soil	DSGSSAEKTVRYPNGGKPLVVIYHDGKAVEIKPGAATAQ*
Ga0070762_109915082	3300005602	Soil	PDAGASSAEKTVRYPNGGKALVVVYSGGKAAEVKAGG*
Ga0070764_109210601	3300005712	Soil	GGGSDQKTVHYPNGGKPVVVVYQDGKAAEIKPGEPSS*
Ga0070766_107004561	3300005921	Soil	VPDSGDTSYEKTVRYPNGGKPLVVVYHEGKAAEVKPGTPPA*
Ga0075017_1006758791	3300006059	Watersheds	MGVPDAGDTSYQKTVHYPNGGKPLVIVYHEGKAAEINQGTPPS*
Ga0075019_102577942	3300006086	Watersheds	DTSYSKTVRYPNGGKPLVIVYHDGKAAEIKPGTPVP*
Ga0070716_1016097212	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RPDAGSSSEEKTVHYPNGGNPLVVVYHDGKAAEIKGESAGS*
Ga0070765_1008936783	3300006176	Soil	GVPDAGDSSDSKTVRYPNGGKPLVIEYHNGKAMEIKAGS*
Ga0068871_1015142351	3300006358	Miscanthus Rhizosphere	GDTSYSKTVRYPNGGNPLVIVYHDGRAAEIKPGTPAS*
Ga0079221_110790393	3300006804	Agricultural Soil	GMGRPDAGSSSEEKTVHYPNGGNPLVVVYHDGKAAEIKAEPAGL*
Ga0075424_1028680141	3300006904	Populus Rhizosphere	PDAGDVSYEKTVRYPNGGKPLVVVYHDGKAAEIKPGTPS*
Ga0102924_10558331	3300007982	Iron-Sulfur Acid Spring	SSDEKTVRYPNGGKPIVIVYQGGKAAEIKAGTPGS*
Ga0102924_12696122	3300007982	Iron-Sulfur Acid Spring	MGVPDRGDTSEQKTVHYPNGGKPVVIVYVDGKAAQIKPDSPAS*
Ga0066710_1043326532	3300009012	Grasslands Soil	GDTSYQKTVHYPNGGKPLVIVYHEGKAAEINPGTPPS
Ga0099830_103075071	3300009088	Vadose Zone Soil	ALDAGSSSAERTLHYANGGKPLVVIYRDGKAAEIKPGT*
Ga0099828_116000392	3300009089	Vadose Zone Soil	GNSSSEKTVRYPNGGKPLVVTYRDGKAVDIKTGMAGS*
Ga0116218_10413483	3300009522	Peatlands Soil	VPDAGSSSDEKTVRYPNGGKPVVVVFRDGKAAEVKAGPPGS*
Ga0116107_11423082	3300009548	Peatland	DAGTSSDEKTVRYPNGGKPLVVIYQGEKATEIKPGT*
Ga0116138_12406051	3300009552	Peatland	GQSSDEKTVRYPNGGKPLVVNYSGGKATEIKAGT*
Ga0126374_108214661	3300009792	Tropical Forest Soil	IGMGVPDAGDTSYEKTVRYPHGGKPLVIVYHDGRAADIKPGTPPS*
Ga0126377_104072971	3300010362	Tropical Forest Soil	IGMGIPDAGDTSYQKTVHYPNGGSPLVVVYQDGKAAEIKPGTPAS*
Ga0136449_1004323284	3300010379	Peatlands Soil	GMGVLDAGSSSSERTLRYPNGGKPLVVIYRDGKAEEVKEGT*
Ga0126361_112699151	3300010876	Boreal Forest Soil	MGVPDAGASSNEKTVRYPNGGKALVVIYSGGKATEIKAGG*
Ga0137388_117470442	3300012189	Vadose Zone Soil	PDAGASSNEKTVRYPNGGKPLVVIYRGGSATEVKAGA*
Ga0137386_104877542	3300012351	Vadose Zone Soil	ALGMGTPDSGSSLEKTVRYPNGGKPLVVVYRDGKAVEIKPEKP*
Ga0181531_102082241	3300014169	Bog	SGSDEKTVRYPNGGKPVVVVYHEGKAADIKAGSPGS*
Ga0181519_100682934	3300014658	Bog	VPDSGSTSDDKTVRYANGGKPLVVVYHGGKAVEVNPGK*
Ga0182039_105591872	3300016422	Soil	GVPDAGDTSYEKIVRYPNGGKPLVIIYHDGRAAEIKPGTPPS
Ga0182038_121560282	3300016445	Soil	AIGMGVPDSGNSSEQKTVRYPNGGKPLVVVYRDGRAAEISPGTPAS
Ga0187818_105066862	3300017823	Freshwater Sediment	IGMGVPDAGGGSEKTVHYPNGGKPLVIVYEDGKAAEIKAGS
Ga0187825_103882332	3300017930	Freshwater Sediment	GSSSDEKTVHYPNGGKPLVVVYHGDKAAEIKPDSTGS
Ga0187821_102574312	3300017936	Freshwater Sediment	PDGGDTSYEKTVRYPNGGKPLVVVYHDGKAAEIKPGTPG
Ga0187817_110990231	3300017955	Freshwater Sediment	TSYEETVRYPNGGNPLVVVYHDGKAADIKPGSPAS
Ga0187779_104646571	3300017959	Tropical Peatland	AGGGSDEKTVRYPNGGKPLVIVYQDGKATEIKAESSGS
Ga0187781_100998663	3300017972	Tropical Peatland	AVGMGVPDAGASSEEKTVRYPNGGKPLVVTYEDGKARDIRAGT
Ga0187781_103730373	3300017972	Tropical Peatland	AGDTSYEKTVRYRNGGKPLVIVYHDGKAAEIRPGS
Ga0187780_111330342	3300017973	Tropical Peatland	DAGDVSYQKTVRYPNGGKPLVIVYRDGKAAEIKAAVPGS
Ga0187782_102766063	3300017975	Tropical Peatland	MGVPDAGASSYEKTVRYANGGKPMAVVFHDGKAAEITAGQ
Ga0187782_115926272	3300017975	Tropical Peatland	EAVFAIGMGVPDAGGTSDEKTVRYPNGGKPLVIEYHGGKAAEIAPGT
Ga0187805_103932501	3300018007	Freshwater Sediment	DAGDTSYEKTVRYPNGGNPLVVVYHDGKAADIKPGTPAS
Ga0187885_103681922	3300018025	Peatland	PDAGASSDNKTVRYPNGGKPLVVTYQGGKAMEIKPGS
Ga0187883_107719932	3300018037	Peatland	VPDAGSSSEEKTVRYPNGGKPLVVVYRDGRAAEIKPGT
Ga0187772_111775432	3300018085	Tropical Peatland	IGMGVPDPGDTSYEKTVHYPDGGKPLVIVYHDGKAAEINPDSPGRKP
Ga0187771_104157593	3300018088	Tropical Peatland	ADFAIGIGVPDAGDTSYEKTVHYPNGGNPLVIVYRDGKAAEIKPDHPAS
Ga0210403_101530883	3300020580	Soil	VPDAGSSSDEKTVRYPNGGQPLVIVYHDGKAAEIKPGSPES
Ga0210395_105785052	3300020582	Soil	VPDAGASSEEKTVRYPNGGKPLVVIYRDEKAAEIKPGT
Ga0210404_108636331	3300021088	Soil	VGMGVPDSGDTSYEKTVRYPNGGKPLVVVYHNGKAAEVKPGTPAS
Ga0210405_105445722	3300021171	Soil	GIPDAGSSSYEKTVRYANGGNPVVIVYHDGKAAEITAGTAGK
Ga0210408_103164751	3300021178	Soil	DSGGSSEKTVRYPNGGKPLVVVYQDGKAEDIKPGTPPA
Ga0210396_110202651	3300021180	Soil	DSGASPDDKTVRYPNGGKPLVVVFHGGKAVEINPGT
Ga0210393_109525772	3300021401	Soil	PDAGDSSYSKTVRYPNGGKPLVIEYHNGKAMEIKAGS
Ga0210389_102069843	3300021404	Soil	MGVPDAGDTSYQKTVHYPNGGKPLVIVYHEGKAAEINPGTPPS
Ga0210387_118569841	3300021405	Soil	ADFAIGMGVPDGGDTSYQKTVHYPNGGKPLVIVYHEGKAAEINPGTPPS
Ga0210394_114633892	3300021420	Soil	IGMGVPDAGSSSDEKTVRYPNGGKPLVIVYHDGKAAEIKPGSPES
Ga0210384_113696342	3300021432	Soil	GGSEKTVHYPNGGKPLVVVYEDGKAAEIKPGSPAS
Ga0210392_105176323	3300021475	Soil	ADFAIGMGVPDAGGGSEKTVHYPNGGKPLVVVYEDGKAAEIKPGSPGS
Ga0210410_104736413	3300021479	Soil	FAVGMGVPDAGASSAEKTVRYPNGGKALVVVYSGGKAAEVKAGS
Ga0210410_106601382	3300021479	Soil	QGGGPDEKTVRYPNGGKPLVVSYRGGKVTEVKAGG
Ga0210410_117883552	3300021479	Soil	DTSYEKTVHYPNGGKPLVIVYHDGKAADIQPDSPSH
Ga0210409_105958051	3300021559	Soil	GMGVPDAGDSSVEKTVRYPNGGKPLVVVYHDGKAAEIKPGT
Ga0210409_107754541	3300021559	Soil	GMGVPDAGAKSGEKTVRYPNGGKPLVVDYRDGKAEEIKPGT
Ga0126371_137847401	3300021560	Tropical Forest Soil	GMGVPEAGDTAYEKIVRYPNGGRPLVIVYHNGRAAEVKPGTPPS
Ga0126371_138468332	3300021560	Tropical Forest Soil	PDAGDTSYQKTVHYPNGGKPLVVVYQDGKAADIKPGTPAS
Ga0213853_111027762	3300021861	Watersheds	VPDAGDTSYQKTVRYPNGGKPLVIVYHDGKAAVINPGAPGS
Ga0242662_103038822	3300022533	Soil	DISYEKTVRYPNGGKPLVIVYHDGKAAEIKPGTPAS
Ga0224569_1002087	3300022732	Rhizosphere	DAGSSSEEKTVRYPNGGKSLVVIYQDGKAAEIKAGT
Ga0224572_11004881	3300024225	Rhizosphere	AVGMGALDAGSSSAERTLRYANGGKPLVVVYRDGKAVEVKAGT
Ga0208936_10156942	3300025404	Peatland	IGMGVPDAGSGSDEKTVRYPNGGKPVVVVYHEGKAADIKAGSPGS
Ga0208848_10725511	3300025509	Arctic Peat Soil	GSSSYERTLRYPNGGKPVVVVYQNGKATEIKAGSTGS
Ga0207685_105457572	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GMGVPDAGDVSYEKTVRYPNGGKPLVVVYHDGKAAEIKPGTPS
Ga0207684_110378942	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	FAIGMGVPDAGDTSYEKTVRYPNGGKPVVVVYHDGKAAEIKAGSPGS
Ga0207700_111171111	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGVPDGGDVSYQKTVRYPNGGKPLVIVYHEGKAAEIKAGTPAS
Ga0179587_105297891	3300026557	Vadose Zone Soil	AVGMGVPDAGASSSEKTVRYPNGGKPLVVTYRGGNATEIKAGS
Ga0208066_1009981	3300026916	Soil	GDTSEQKTVRYPNGGKPLVIVYHEGKAAEIKPGTPGS
Ga0208241_10080811	3300027297	Forest Soil	PDSGSSLEKTVRYPNGGKPVVVIYRDGKAAEVKPGS
Ga0209622_10529752	3300027502	Forest Soil	GMGVPDPGGSEQKTVHYPNGGKPLVITYRDGKAVEIKADSGS
Ga0209330_10049232	3300027619	Forest Soil	SSSDEKTVRYPNGGKPLVIVYRDGKAAEIKPGSPES
Ga0209007_11590051	3300027652	Forest Soil	GMGVPDSGESSDQKTVRYPNGGKPLVVNYQGGKATEVKAGS
Ga0209811_101790642	3300027821	Surface Soil	AIGMGVPDAGGSSEKTVRYPNGGKPLVIVYHDGKAAEIKAGTAGS
Ga0209811_102745011	3300027821	Surface Soil	MRIRIVNMGVPDSGDTSYEKTVRYPNGGKPLVIVYHDGKAAEIKPGTPPS
Ga0209274_100528844	3300027853	Soil	DSGSSSYEKTVRYPNGGKPLVVVYHDGKAAEVTPGTPPA
Ga0209167_100026151	3300027867	Surface Soil	DFALGMGVPDMGSSGEEKTVRYPNGGKPWVVSYREGKATEVKAGT
Ga0209167_105254001	3300027867	Surface Soil	AIGMGVPDAGDTSYEKTVRYPNGGNPLVVVYHDGKAADIKPGSPAS
Ga0209275_106363231	3300027884	Soil	GVPDAGASSAEKTVRYPNGGKALVVVYSGGKAAEVKAGG
Ga0209380_102229653	3300027889	Soil	AGSSSAERTLRYANGGKPLVVIYRDGKAVEVRAGT
Ga0209006_113199571	3300027908	Forest Soil	FAIGMGVPDAGDTTYEKTVRYPNGGKPLVIVYHDGKAADIKPGAPAS
Ga0302232_100220451	3300028789	Palsa	EAGSGEDGKTVRYPNGGKPLVVSYRGGKAAEVKAGT
Ga0302154_105007591	3300028882	Bog	AVGMGTLDAGSSSAERTLHYANGGKPLVVIYRDGKAAEIKAGT
Ga0308309_111479332	3300028906	Soil	SGDTSYEKTVRYPNGGKPLVVVYHDGKAAEVKPGTPPA
Ga0302200_102506352	3300028909	Bog	VPDAGATSAERTVRYPNGGKPLVVEYRGDKVSAVSAGS
Ga0222749_103162824	3300029636	Soil	DFAIGMGVPDAGGSDEKTVRYPNGGKPVVVVYRDGKAAEIKVGSPGSS
Ga0247271_1302941	3300029903	Soil	GMGVPDAGSSTEEKTVHYPNGGKPLVVEYREGKAAAIKAGS
Ga0302179_100682071	3300030058	Palsa	GVPDAGASSDEKTVRYPNGGKPLVVSYSGGKAMEVKAGS
Ga0210286_11932431	3300030597	Soil	PDSGDTSYEKTVRYPNGGKPLVVVYHDGKAAEVKPGTPPA
Ga0311356_107993431	3300030617	Palsa	DAGSSSSDRVLRYPNGGKPLVVTYRDGKAAEIKPGT
Ga0311354_110873442	3300030618	Palsa	IGMGVPDAGGGSEEKTVRYPNGGKPLVVVYEDGKAADIKQASPAS
Ga0073994_100038031	3300030991	Soil	AVGMGVPDTGNSSSEKTVRYPNGGKPLVIVYRDGKAVEIKAGS
Ga0302180_102020743	3300031028	Palsa	DAGGGSDEKTVRYPNGGKPVVVVYHDGKAAEIKAGEPSS
Ga0170824_1053229441	3300031231	Forest Soil	GSSSYEKTVRYPNGGKPVVIVYHDGKAAEIKAGSSGS
Ga0170824_1245995421	3300031231	Forest Soil	GDTSYEKTVRYPNGGKPVVVVYHDGKAAEIKVGSPGS
Ga0302318_102618911	3300031258	Bog	DAGSSSAERTLHYANGGKPLVVIYRDGKAAEIKAGT
Ga0302326_103913331	3300031525	Palsa	AVGMGVPDAGSSEDEKTVRYPNGGKPLVVSYRGGKATEIKAGS
Ga0310686_1098182572	3300031708	Soil	AGASSNDKTVRYPNGGKPLVVTYSGGKAMEVKAGG
Ga0307476_100147707	3300031715	Hardwood Forest Soil	ADFAVGMGVPDAGASSNEKTVRYPNGGKPLVVIYRGGSATEVKAGS
Ga0307476_105586692	3300031715	Hardwood Forest Soil	DAGDTSYQKTVHYPNGGNPLVIVYHDGKAAEIKPGA
Ga0307476_112302382	3300031715	Hardwood Forest Soil	ADFAVGMGVPDSGASSDDKTVRYANGGKPLVVVFHGGKAVEINPGT
Ga0306917_109945111	3300031719	Soil	DSGNSSEQKTVRYPNGGKPLVVVYRDGRAAEISPGTPAS
Ga0307478_117506141	3300031823	Hardwood Forest Soil	DFAIGMGVPDAGDSSYQKTVHYPNGGKPLVIVYHDGKAAEIKAGS
Ga0310912_110459621	3300031941	Soil	SGNSSEQKTVRYPNGGKPLVVVYRDGRAAEISPGTPAS
Ga0308176_100438361	3300031996	Soil	GMGRPDAGSSSEEKTVHYPNGGKPLVVVYHRDKAAEIKPDSAGS
Ga0307470_108342301	3300032174	Hardwood Forest Soil	GVPDGGETSYQKTVHYPNGGKPLVIVYHEGKAAEINPGTPPS
Ga0307471_1013569492	3300032180	Hardwood Forest Soil	VGMGVPDAGASSNEKTVRYPNGGKPLVVIYSGGKATEIKAGS
Ga0348332_147175422	3300032515	Plant Litter	MGVPDSGGDSDEKTVRYANGGKPLVVTYRQGKAAEIKPGS
Ga0335078_1002120211	3300032805	Soil	PDRSTDSDVKTVRYPNGGQPLVVTYQEGKATEIRPGS
Ga0335069_105641221	3300032893	Soil	DFAIGMGMPDAGDTSYEKTVRYPNGGKPVVIVYHDGKAAEIKAGE
Ga0335071_100082081	3300032897	Soil	IGMGMPDAGDTSYEKTVRYPNGGKPVVIVYHDGKAAEIKAGE
Ga0335072_101152864	3300032898	Soil	DPGDTSYEKTVHYPNGGKPLVIVYHDGKAAEINSAPPGS
Ga0326727_102830933	3300033405	Peat Soil	PDRGDTTYEKTVRYPNGGKPLVIVYREGKAADIQAAAPGS
Ga0310810_112312131	3300033412	Soil	GRPDAGSSSEEKTVHYPNGGNPLVVVYHDGKAAEIKAEPAGL
Ga0326726_106341091	3300033433	Peat Soil	MLDGSSTSFSRTLHYANGGKPLTVTYHDDKAVEIKAGT
Ga0370515_0400362_7_138	3300034163	Untreated Peat Soil	MGVPDSGSSSYEKTVRYPNGGKPLVVLYHDGKAAEVKPGTPAS