Metagenome Family F063548

Basic Information
Family ID	F063548
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	46 residues
Representative Sequence	MSRRLRQAAVVFIVVFAAAQLVRPQRTNPATDVSRTIQAHVGTA
Number of Associated Samples	111
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.66 %
% of genes near scaffold ends (potentially truncated)	94.57 %
% of genes from short scaffolds (< 2000 bps)	94.57 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Bacteria (90.698 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (6.977 % of family members)
Environment Ontology (ENVO)	Unclassified (31.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.310 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 31.94% β-sheet: 0.00% Coil/Unstructured: 68.06%
Feature Viewer

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Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF12674	Zn_ribbon_2	2.33
PF05787	DUF839	2.33
PF02954	HTH_8	2.33
PF13380	CoA_binding_2	1.55
PF07883	Cupin_2	1.55
PF00561	Abhydrolase_1	0.78
PF07396	Porin_O_P	0.78
PF02894	GFO_IDH_MocA_C	0.78
PF13442	Cytochrome_CBB3	0.78
PF08241	Methyltransf_11	0.78
PF12704	MacB_PCD	0.78
PF01022	HTH_5	0.78
PF05694	SBP56	0.78
PF10070	DabA	0.78
PF00578	AhpC-TSA	0.78
PF00903	Glyoxalase	0.78
PF01979	Amidohydro_1	0.78
PF01292	Ni_hydr_CYTB	0.78
PF00873	ACR_tran	0.78
PF02627	CMD	0.78
PF13941	MutL	0.78
PF00072	Response_reg	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3211	Secreted phosphatase, PhoX family	General function prediction only [R]	2.33
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.78
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.78
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.78
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.78
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.78
COG3038	Cytochrome b561	Energy production and conversion [C]	0.78
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.78
COG3746	Phosphate-selective porin	Inorganic ion transport and metabolism [P]	0.78
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.70 %
Unclassified	root	N/A	9.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.70 %
Unclassified	root	N/A	9.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.70 %
Unclassified	root	N/A	9.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.95 %
Unclassified	root	N/A	9.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.55 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.30 %
Unclassified	root	N/A	9.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.20 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	1.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Unclassified	root	N/A	9.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.20 %
unclassified Thermoanaerobaculia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia	1.55 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.78 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.78 %
unclassified Firmicutes sensu stricto	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Unclassified	root	N/A	9.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.20 %
Thermoanaerobaculia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	1.55 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.78 %
Firmicutes bacterium RBG_13_65_8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium RBG_13_65_8	0.78 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Unclassified	root	N/A	9.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.20 %
Thermoanaerobaculia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	1.55 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.78 %
Firmicutes bacterium RBG_13_65_8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium RBG_13_65_8	0.78 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Unclassified	root	N/A	9.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.20 %
Thermoanaerobaculia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	1.55 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.78 %
Firmicutes bacterium RBG_13_65_8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium RBG_13_65_8	0.78 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.30 %
Unclassified	root	N/A	9.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.20 %
Thermoanaerobaculia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	1.55 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.78 %
Firmicutes bacterium RBG_13_65_8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium RBG_13_65_8	0.78 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12435034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300000789\|JGI1027J11758_12444172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300004281\|Ga0066397_10145141	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300004480\|Ga0062592_100600011	Not Available	935	Open in IMG/M
3300004480\|Ga0062592_102310010	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005294\|Ga0065705_10591381	Not Available	712	Open in IMG/M
3300005332\|Ga0066388_100293521	All Organisms → cellular organisms → Bacteria	2270	Open in IMG/M
3300005332\|Ga0066388_102013130	Not Available	1036	Open in IMG/M
3300005332\|Ga0066388_104673571	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005335\|Ga0070666_11273970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005343\|Ga0070687_100608443	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300005345\|Ga0070692_10567977	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300005354\|Ga0070675_100419371	All Organisms → cellular organisms → Bacteria → Acidobacteria	1196	Open in IMG/M
3300005434\|Ga0070709_10732767	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	771	Open in IMG/M
3300005446\|Ga0066686_10870964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300005456\|Ga0070678_101558289	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005459\|Ga0068867_100946640	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005526\|Ga0073909_10038906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1674	Open in IMG/M
3300005536\|Ga0070697_101684801	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005564\|Ga0070664_100865141	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005617\|Ga0068859_102943995	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005618\|Ga0068864_101142434	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005764\|Ga0066903_101213582	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300005764\|Ga0066903_104887726	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005764\|Ga0066903_107643334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005764\|Ga0066903_108910681	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005836\|Ga0074470_10137850	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005844\|Ga0068862_101796935	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300006791\|Ga0066653_10650516	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006797\|Ga0066659_10942343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300006845\|Ga0075421_101803323	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300006852\|Ga0075433_10175178	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300006854\|Ga0075425_101789457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300006854\|Ga0075425_102750957	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300006871\|Ga0075434_101774522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300006876\|Ga0079217_10187891	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300007004\|Ga0079218_12126205	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300009093\|Ga0105240_12770370	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009094\|Ga0111539_10607068	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300009098\|Ga0105245_13168199	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300009100\|Ga0075418_10179150	All Organisms → cellular organisms → Bacteria	2257	Open in IMG/M
3300009100\|Ga0075418_10511378	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300009100\|Ga0075418_13017312	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009167\|Ga0113563_11275464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	858	Open in IMG/M
3300010043\|Ga0126380_11107389	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300010047\|Ga0126382_11541038	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300010358\|Ga0126370_10845155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300010360\|Ga0126372_11006594	Not Available	845	Open in IMG/M
3300010360\|Ga0126372_11226104	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300010366\|Ga0126379_12857813	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300010375\|Ga0105239_11571607	Not Available	760	Open in IMG/M
3300010398\|Ga0126383_12918552	Not Available	558	Open in IMG/M
3300010401\|Ga0134121_12198197	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300010403\|Ga0134123_11992484	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300011444\|Ga0137463_1250516	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300012134\|Ga0137330_1042947	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012206\|Ga0137380_11226616	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012207\|Ga0137381_10830256	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300012212\|Ga0150985_121617631	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300012354\|Ga0137366_10026191	All Organisms → cellular organisms → Bacteria	4535	Open in IMG/M
3300012359\|Ga0137385_10983683	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012360\|Ga0137375_10598389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium RBG_13_65_8	919	Open in IMG/M
3300012469\|Ga0150984_110649013	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300012503\|Ga0157313_1040641	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300012672\|Ga0137317_1031295	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012931\|Ga0153915_10195936	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300012931\|Ga0153915_11680662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300012931\|Ga0153915_12364749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	622	Open in IMG/M
3300013297\|Ga0157378_10048434	All Organisms → cellular organisms → Bacteria	3779	Open in IMG/M
3300014262\|Ga0075301_1048282	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300014318\|Ga0075351_1149227	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300014326\|Ga0157380_10932191	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300014326\|Ga0157380_12370860	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300015372\|Ga0132256_103004118	Not Available	567	Open in IMG/M
3300015372\|Ga0132256_103790967	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300015373\|Ga0132257_103871087	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300015374\|Ga0132255_103107665	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300016422\|Ga0182039_10814369	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300017966\|Ga0187776_10358275	All Organisms → cellular organisms → Bacteria → Acidobacteria	965	Open in IMG/M
3300018084\|Ga0184629_10171889	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300018084\|Ga0184629_10487704	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300018089\|Ga0187774_10863567	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300018469\|Ga0190270_11041513	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300018481\|Ga0190271_11780443	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300019361\|Ga0173482_10184037	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300019362\|Ga0173479_10111125	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300021560\|Ga0126371_10777786	All Organisms → cellular organisms → Bacteria → Proteobacteria	1104	Open in IMG/M
3300024290\|Ga0247667_1113052	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300025906\|Ga0207699_11049271	Not Available	603	Open in IMG/M
3300025906\|Ga0207699_11442977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300025930\|Ga0207701_11042852	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300025935\|Ga0207709_11445729	Not Available	570	Open in IMG/M
3300025961\|Ga0207712_11743559	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300026067\|Ga0207678_10494704	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300026095\|Ga0207676_11327262	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300026121\|Ga0207683_10835219	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300026316\|Ga0209155_1090614	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300026843\|Ga0208126_1002616	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300026886\|Ga0207982_1006326	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300027614\|Ga0209970_1048785	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300027765\|Ga0209073_10359463	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300027915\|Ga0209069_10249342	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300028381\|Ga0268264_11812861	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300028803\|Ga0307281_10079420	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300031679\|Ga0318561_10393062	Not Available	761	Open in IMG/M
3300031716\|Ga0310813_11627816	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300031720\|Ga0307469_12085140	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300031833\|Ga0310917_10257701	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300031852\|Ga0307410_11528720	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300031890\|Ga0306925_10161734	All Organisms → cellular organisms → Bacteria → Proteobacteria	2411	Open in IMG/M
3300031896\|Ga0318551_10591750	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300031897\|Ga0318520_10691369	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300031908\|Ga0310900_11101961	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300031910\|Ga0306923_10586215	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300031911\|Ga0307412_11778208	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300031912\|Ga0306921_10311916	All Organisms → cellular organisms → Bacteria → Proteobacteria	1841	Open in IMG/M
3300031945\|Ga0310913_11319054	Not Available	500	Open in IMG/M
3300031954\|Ga0306926_11171699	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300031995\|Ga0307409_101199146	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300032094\|Ga0318540_10535347	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300032179\|Ga0310889_10477002	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300032211\|Ga0310896_10345066	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300033433\|Ga0326726_12163464	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300033480\|Ga0316620_12127166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → unclassified Thermoanaerobaculia → Thermoanaerobaculia bacterium	558	Open in IMG/M
3300033513\|Ga0316628_102794840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300033513\|Ga0316628_103629511	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300033551\|Ga0247830_10740634	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300034151\|Ga0364935_0145944	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.99%
Host-Associated	Host-Associated	31.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.47%
Plants	Host-Associated → Plants	31.01%
Aquatic	Environmental → Aquatic	8.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.08%
Sediment	Environmental → Aquatic → Sediment	5.43%
Freshwater	Environmental → Aquatic → Freshwater	3.10%
Peat	Environmental → Terrestrial → Peat	0.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.50%
Loam	Environmental → Terrestrial → Soil → Loam	11.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.33%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.88%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.33%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.55%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012134	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT142_2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012672	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT266_2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026843	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA (SPAdes)	Environmental	Open in IMG/M
3300026886	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_124350341	3300000789	Soil	MSRRMKQAAIVFVAVFAAAQFVRPERATPATDVSRTIQ
JGI1027J11758_124441721	3300000789	Soil	MSRRMKQAAIVFVAVFAAAQFVRPERATPATDVSRTXXAQ
Ga0066397_101451411	3300004281	Tropical Forest Soil	MSRRLKQAAVVFVVVFAVAQLVRPEHANPATDPTRTIRAHMGDASGLPAVLDRACG
Ga0062592_1006000111	3300004480	Soil	MKRRLRQGALVLVVAFAAAQLVRPQRANPPIDPARTIRAHVSPSSRLPAVLDR
Ga0062592_1023100102	3300004480	Soil	VSTRLKQAAVVFIIVFAAAQFVRPERANPATDARRTIQAHVGTASGLVAV
Ga0065705_105913811	3300005294	Switchgrass Rhizosphere	MSRRLRQAAVVFIVVFAAAQLVRPQRTNPATDVSRTIQAHVGTA
Ga0066388_1002935214	3300005332	Tropical Forest Soil	VGRRLLQVAVVVVVLFAAAQLVRPPHSNPPIDASRTIEAHLGAANGLAAVLNRSC
Ga0066388_1020131301	3300005332	Tropical Forest Soil	MSRRLKQAAVVFVAVLAAAQLIRPEHVNPPTDATRTIQAHETTKGLA
Ga0066388_1046735712	3300005332	Tropical Forest Soil	MNRRLKQGAFVLVVVFAAAQLVRPERANPPTDVSRTIEAHVGTTSGLGAVLNRACSD
Ga0070666_112739702	3300005335	Switchgrass Rhizosphere	MSRRMKQAATVFVAVFAAAQFVRPERAPPTTDVSRTIQAQIGTANGLAAVLD
Ga0070687_1006084432	3300005343	Switchgrass Rhizosphere	VSRRLKQAAIALVAVFAAAQLVRPERANPPTGAHRTIQAHMPTGSGLVA
Ga0070692_105679771	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VSRRPKQAAVVFIIVFAAAQFVRPERANPATDARRTIQAHVG
Ga0070675_1004193711	3300005354	Miscanthus Rhizosphere	VSRQLKRAAVVFIVVFAAAQLVRPERANPATDERRTIQAHVGTANGLVAVLDRACR
Ga0070709_107327672	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGRRLKNAAIILIILFAAAQLVRPSHANPPTDASRAIQAHVSTHGLATILD
Ga0066686_108709641	3300005446	Soil	MRRLKQAAVVFVVVFAAAQFVRPERANPATDPNRTIRAHMGTA
Ga0070678_1015582892	3300005456	Miscanthus Rhizosphere	MRRRLKQAAVVFVVIFAAAQLVRPERTNPATDASHTIQAHVG
Ga0068867_1009466402	3300005459	Miscanthus Rhizosphere	LKQAAVVFIIVFAAAQFVRPERANPATDVHRTIQAHVETASAR*
Ga0073909_100389063	3300005526	Surface Soil	VRRRLKQAAVIFVVVFAAAQLVRPGRANPATDPSRTIQAHVGTASGLVAVLD
Ga0070697_1016848011	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRLQLAAIVVAAVFAAAQLIRPDRANPPTDAGRTIQAHPGTASGLVAVLDRACR
Ga0070664_1008651412	3300005564	Corn Rhizosphere	MSRRMKQAATVFVAVFAAAQFVRPERAPPTTDVSRTIQA
Ga0068859_1029439951	3300005617	Switchgrass Rhizosphere	MPKRLKQGAVVFIVVGAAAQLVRPDRANPATDDSRTIHAYLGAAAGLTAVLDRSCRD
Ga0068864_1011424341	3300005618	Switchgrass Rhizosphere	MSRGVKQAAVVFVIVLAAAQLVRPEHANPATDATRTIQAHAGTTSELVAVLDRS
Ga0066903_1012135821	3300005764	Tropical Forest Soil	MNRRTKQVAVVFVVLLAAAQLIRPDSTNPATDASHTIEAVVGTHDGLVAVLDRSC
Ga0066903_1048877262	3300005764	Tropical Forest Soil	MRTRLKQAAIVFVVVFAAAQLVRPGRTNPTIDPSRTIQAHEGTTSELVAVLDR
Ga0066903_1076433341	3300005764	Tropical Forest Soil	MSKRLKQAAVIFIVVLAAAQLVRPERANPPTDASRTIQAHVGTASGLAAVL
Ga0066903_1089106811	3300005764	Tropical Forest Soil	VRTRVKRAAVVLTVVIVAAQLVRPGRANPATDASRTFAAHAG
Ga0074470_101378501	3300005836	Sediment (Intertidal)	MKKRLKQATVAFLAVFALAQLVRPERANPPIDAGRTIRAH
Ga0068862_1017969351	3300005844	Switchgrass Rhizosphere	MRRRLTQAVVIFGVVFAAAQLVRPDRTNPPIDPSRTIQAH
Ga0066653_106505161	3300006791	Soil	VSRRLKQAVVVLVVVFAAAQLVRPGRGNPPTNPSRTIQAHVPTTSGLAAV
Ga0066659_109423431	3300006797	Soil	MNRRLKQAVLVFIVVFAAAQLIRPERANPATDVSRTIEAHV
Ga0075421_1018033231	3300006845	Populus Rhizosphere	VSRRLKQSVVVFVVVFAAAQLVRPERANPATDATRAIQAHAGTTSELVA
Ga0075433_101751783	3300006852	Populus Rhizosphere	VSRRLKQAAVVFIIVFAAAQFVRPERANPATDARRTIQARVGTASGES*
Ga0075425_1017894571	3300006854	Populus Rhizosphere	VSRAPRRIAVSRRLKQAAVVFIIVFAAAQFVRPERANPATDARRTIQARVGTASGES*
Ga0075425_1027509571	3300006854	Populus Rhizosphere	MTRAKQAAVVLILVLAAAQLVRPERANPPIDPSRTIQAQLGTASE
Ga0075434_1017745221	3300006871	Populus Rhizosphere	VNRRVKQAVIVIVVVVAAAQLVRPERANPPTDADRTIQ
Ga0079217_101878912	3300006876	Agricultural Soil	VSTRLKQAAVVFIIVFAAAQFVRPERANPATDARRTIQAHV
Ga0079218_121262051	3300007004	Agricultural Soil	VSGRLKQAAVVFIIVLAAAQFVRPERANPATDARRTIQAHVGTASGLVAV
Ga0105240_127703701	3300009093	Corn Rhizosphere	VSRRLKQAAIVILAVFAAAQLVRPARTNPATDSSRT
Ga0111539_106070683	3300009094	Populus Rhizosphere	VSTRLKQAAVVFIVVFAAAQLVRPERANPATDATRTIQAHTGTT
Ga0105245_131681992	3300009098	Miscanthus Rhizosphere	MNRRLKQAAVVFVFVFAAAQFVRPERANPATDVGRTIQAHGGTTSGLVAV
Ga0075418_101791504	3300009100	Populus Rhizosphere	MSRRLTLVAVTVVLAFAVAQLVRPARANPPTDPSRTIQAHLGTAPE
Ga0075418_105113781	3300009100	Populus Rhizosphere	MTRRLRQAAILFVVVFAAAQLIRPERANPPTDPSHTFQAQAGTA
Ga0075418_130173122	3300009100	Populus Rhizosphere	MIRRLKQAAVVLVIVLAAAQLVRPDRENPATNATRTIRAHAGTT
Ga0113563_112754643	3300009167	Freshwater Wetlands	MSRRMKQAGVVFVVVFAAAQLVRPDRRNPATDATRTI*
Ga0126380_111073891	3300010043	Tropical Forest Soil	MSRRLKQAAVVFVVVFAAAQLVRPEHANPATDPTRTIRAHMGEASGLPAVLDRACREC
Ga0126382_115410381	3300010047	Tropical Forest Soil	MARRLKQAAVLFVVVFATAQLVRPERANPSTDESRTIQAHVKNAGGMV
Ga0126370_108451551	3300010358	Tropical Forest Soil	MGRRLKQAAIVFVVLFAAAQLVRPSRANPPTDPGRTIQAHETTRGL
Ga0126372_110065941	3300010360	Tropical Forest Soil	MSRRLKRVAVVFVVVLAAAQLVRPERTNPATDAGR
Ga0126372_112261041	3300010360	Tropical Forest Soil	MRRRLTQAVVVFLVLFAAAQLVRPGRTNPPTDPSRTIR
Ga0126379_128578132	3300010366	Tropical Forest Soil	MTKRLAYAAIIVVVVLAGAQLIRPNRANPPTDPSRTIQAHLGA
Ga0105239_115716072	3300010375	Corn Rhizosphere	MSRRLKQVAGVFFIVFAAAQFVRPERANPPTDVSRAIQAQVGTGSALVAVLDRACSD*
Ga0126383_129185522	3300010398	Tropical Forest Soil	MSRRLKQGAIVLVVVLAVAQLIRPSRANPPIDPARTIQAHET
Ga0134121_121981971	3300010401	Terrestrial Soil	MPKRLKKGAVVFVVVVAAAQLVRPDRANPATDASRSI
Ga0134123_119924841	3300010403	Terrestrial Soil	MRRRLVQASVLFVVVFAAAQLVRPERTNPVTDPTRTIRAHVAETSQLPV
Ga0137463_12505161	3300011444	Soil	MSRRLKQIAIVFIVVFAAAQLIRPERTNPPTDPSRTIEAQMKTASGLVAVL
Ga0137330_10429472	3300012134	Soil	VSRRLKQAAVVFIIVLAAAQFVRPGRANPASDARRTIQAQVGTASGLVAVLDRAC
Ga0137380_112266162	3300012206	Vadose Zone Soil	MPISRRLKQAAVVFVVVFAAAQLVRPERANPATDVSRTIQ
Ga0137381_108302561	3300012207	Vadose Zone Soil	MPISRRLKQAAVVFVVVFAAAQLVRPERANPATDVSRTIQAHAG
Ga0150985_1216176312	3300012212	Avena Fatua Rhizosphere	VSKRLKQAAIVIVVLFAAAQLLRPDQTNPPTDPGRTIQAQVGTA
Ga0137366_100261915	3300012354	Vadose Zone Soil	MSRRLKLAAVVFVVFAAAQLVRPERANPATNASHTIQAEAGTAIGLVAV
Ga0137385_109836831	3300012359	Vadose Zone Soil	MPISRRLKQAAVVFVVVFAAAQLVRPERANPATDVSRTIQAHAGTATELVAVLDRACRD
Ga0137375_105983893	3300012360	Vadose Zone Soil	MSRRLKLAAIVFVVFAAAQLVRPERANPATDASRTIQAH
Ga0150984_1106490131	3300012469	Avena Fatua Rhizosphere	LTQAAILIAVVVVAAQLVRPERATPVTDANRTIQAQMPTGSELVAVLDRSC
Ga0157313_10406412	3300012503	Arabidopsis Rhizosphere	MRRRLVQATVLFVVVFAAAQLVRPERTNPATDPTRTIRAHVAEASQLPAVL
Ga0137317_10312952	3300012672	Soil	VSTRLKQAAVVFIIVFAAAQFVRPERANPATDARRTIQA
Ga0153915_101959361	3300012931	Freshwater Wetlands	MSRRLKRAAVVLLVVFAAAQLVRPNRANPPTDVSRTMQAQV
Ga0153915_116806621	3300012931	Freshwater Wetlands	MSRRLKQVAIVFVVVVVAAQLVRPGRANPATDASRTIQAHMGTASGLVAVLDR
Ga0153915_123647491	3300012931	Freshwater Wetlands	MSRRLKQAAVVLVVVFAAAQLVRPNRANPPTDVSRT
Ga0157378_100484346	3300013297	Miscanthus Rhizosphere	MRRRLKQAAVVFVVIFAAAQLVRPERTDPAPDASHTIQAH
Ga0075301_10482821	3300014262	Natural And Restored Wetlands	MTRRLKWVAVVFVVVFAAAQLVRPDRSNPATDANRTIQ
Ga0075351_11492271	3300014318	Natural And Restored Wetlands	MSRRVKQAAVVFVVVFAAAQLIRPERAKPPTDVSRTIQAHVGAASG
Ga0157380_109321912	3300014326	Switchgrass Rhizosphere	VSRRLKSAAVVFVAVFAAAQLVRPERANPATDVSRTIQAQVGTANG
Ga0157380_123708602	3300014326	Switchgrass Rhizosphere	MAVSRRLKQATIVIIVVFAAAQLVRPERTNPTTDVGRALQAQMPTGSGLVAVLDR
Ga0132256_1030041182	3300015372	Arabidopsis Rhizosphere	MSRRLMQAAVVFLIAFAGAQLVRPGPANLPVDDSRTIAAHVGTASGLAGGGPRREQRK
Ga0132256_1037909672	3300015372	Arabidopsis Rhizosphere	MRRRHQAVVVFVAVFAAAQLIRPGRTNPPTDGSRTIEAHVGTTSGLA
Ga0132257_1038710872	3300015373	Arabidopsis Rhizosphere	MRTRLKQAAVVFVIVVAAAQLIRPGRANPAIDVNRTIQAHAGTASGLV
Ga0132255_1031076653	3300015374	Arabidopsis Rhizosphere	MRRLKQALLVFVILFAAAQLVRPERANPAIETSRTIAAHLGAANGLT
Ga0182039_108143693	3300016422	Soil	MSRRLKWAAVAVVAVLAAAQLIRPERTNPPTDEGRTIQAHAGTAS
Ga0187776_103582752	3300017966	Tropical Peatland	MSKRVKQIVIGVVAVFAAAQLIRPARTNPPVDSSRTIQAHVATASGLGAVLDRAC
Ga0184629_101718892	3300018084	Groundwater Sediment	VVFVVIVAAAQLFRPERANPAIDASRTIQAHPGTASGLVA
Ga0184629_104877041	3300018084	Groundwater Sediment	MSRRVKQAAAVFGSVSAAAQFVRPERANPATDATRTIQAHVGTTRELVAVLDRSCRD
Ga0187774_108635671	3300018089	Tropical Peatland	MSRRLTQATVVFVVIFAGAQLVRPDRANPPTDPSRTIQAHTGAS
Ga0190270_110415133	3300018469	Soil	VSRRLKQAAVIFIIVLAAAQLVRPERANPATDARRTIQAHVGTARGLVAVL
Ga0190271_117804432	3300018481	Soil	MRRRLKQVGVVFVVAFAAAQLVRPERANPPTDPSRTIQAHIGSASG
Ga0173482_101840371	3300019361	Soil	MKRLKRAALVFIVVFAAAQLVRPERANPPIDPALTIQTYVGTESGL
Ga0173479_101111251	3300019362	Soil	MGRRLKQAAVVFVVIVAAAQLIRPERANPPTDVSRTIQAQVGTASGLVAVLDRSCRD
Ga0126371_107777862	3300021560	Tropical Forest Soil	MSRRLKWAAVVIVAVLAAAQLIRPERTNPPTDEGRTIQAH
Ga0247667_11130522	3300024290	Soil	MKRRVKQAAVVFVVVLAAAQLVRPERANPPIDTSRTIQAHMGTSS
Ga0207699_110492712	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRMKHVAIVFAAVFSAAQFVRPERGTPQTDVSRTIQAQVGT
Ga0207699_114429771	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRMKQAATVFVAVFAAAQFVRPERAPPTTDVSRT
Ga0207701_110428521	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRLVQATVLFVVVFAAAQLVRPERTNPATDPTRTI
Ga0207709_114457292	3300025935	Miscanthus Rhizosphere	MSKRIKQAAMVFVAVFAAAQFVRPERTQPPTDVSRAIQAQIGTASGLAAVLDRACSD
Ga0207712_117435591	3300025961	Switchgrass Rhizosphere	VSRRLKQAAIALVAVFAAAQLVRPERANPPTGAHRTIQAHMPTGSGL
Ga0207678_104947041	3300026067	Corn Rhizosphere	VSRRSKQAAVVFVIVFAAAQLVRPERANPAIDARRTIQAHVGTASGLVADLDRACSD
Ga0207676_113272621	3300026095	Switchgrass Rhizosphere	MSRGVKQAAVVFVIVLAAAQLVRPEHANPATDATRTIQAHAGTTSELVAVLD
Ga0207683_108352193	3300026121	Miscanthus Rhizosphere	MRRRLKQAAVVFVVIFAAAQLVRPERTNPATDASHTIQAHVGTANGLVAI
Ga0209155_10906142	3300026316	Soil	MRRLKQAAVVFVVVFAAAQFVRPERANPATDPNRTIRAHMGTASTLTAV
Ga0208126_10026162	3300026843	Soil	MSRRLKQAAVVFIVVLVAAQFVRPDRTNPATDASRSIDAQAGTGSEFVA
Ga0207982_10063263	3300026886	Soil	MAKRLKLAAVVFIVLLVAAQFVRPDRTNPATDASRSIEAQVGTGS
Ga0209970_10487853	3300027614	Arabidopsis Thaliana Rhizosphere	VSRRLTQAAVVFIIVFAAAQFVRPERANPATDARRTIQAHVGTASGLVAVLDRACS
Ga0209073_103594632	3300027765	Agricultural Soil	MSRRLKQAAVVLVVVFAAAQLIRPERANPATDVHHTIQSQ
Ga0209069_102493423	3300027915	Watersheds	MSRRVKQAAVVFVIVFAAAQLVRPERANPTTDATRTIQAHVGTTGELAAV
Ga0268264_118128611	3300028381	Switchgrass Rhizosphere	MRRRLKQAAVVFVVIFAAAQLVRPERTNPATDASHTIQAHVGTANGLVA
Ga0307281_100794204	3300028803	Soil	MGRRFWLVAGVFVVAFAAAQLIRPDGANPATDASRTIRAHM
Ga0318561_103930622	3300031679	Soil	MSRRLEQAAVVFVVALAAAQLIRPGRANPPTDATRTIHAHETTR
Ga0310813_116278162	3300031716	Soil	VRRRFQQAVVAFVVLIAAAQLVRPAHTNPTTDPSRAIQAAPGTN
Ga0307469_120851402	3300031720	Hardwood Forest Soil	MSRRLKQAAVVFVIVFAAAQLVRPERANPTIDPSRTIRAHVAESSQLPAV
Ga0310917_102577012	3300031833	Soil	MSRRLKWAAVAVVAVLAAAQLIRPERTNPPTDEGRTIQAHAGTASAL
Ga0307410_115287201	3300031852	Rhizosphere	VIRRLKQAAIVIVAVFAAAQLVRPDRTNPATDVSRPIQA
Ga0306925_101617341	3300031890	Soil	MGRRLKWAAVAVVAVLAAAQLIRPERTNPPTDEGRTIQAHAGTAS
Ga0318551_105917501	3300031896	Soil	MSRRLKWAAVAVVAVLAAAQLIRPERTNPPTDEGRTIQAHAGTASALAAVLDRS
Ga0318520_106913693	3300031897	Soil	MHKRLTQAAVVFIVVLAAAQFVRPVRANPAIDVSRTIQAQASELGAVLD
Ga0310900_111019612	3300031908	Soil	MGRRLKQAAVVFVVIVAAAQLIRPERANPPTDVSRTIQAQVGGRADCPPS
Ga0306923_105862151	3300031910	Soil	MRTRLKQAAVLVVVAVAAAQLVRPSRANPPIDASRTIGAHVEPSSGLAPILD
Ga0307412_117782082	3300031911	Rhizosphere	MRRLKYVAVAFVILLATAQFVRPERANPVTNPDRTIKAHVG
Ga0306921_103119161	3300031912	Soil	MSRRLKWAAVAVVAVLAAAQLIRPERTNPPTDEGR
Ga0310913_113190542	3300031945	Soil	MRKRLKQAAVALLGVFAAAQFVRPARANPPTDVTRTIQSR
Ga0306926_111716991	3300031954	Soil	MSGVSGGWRRLKQAAVVVVVVFAAAQLVRPERTNPPVDPGRTIQAHAGTPSGLP
Ga0307409_1011991462	3300031995	Rhizosphere	VSRRLKQAALVIVSVFAAAQLVRPERTNPTTDVSRTIQAHMPTGSGLVAV
Ga0318504_101760543	3300032063	Soil	VSRRLTRIAVVFVGAFAAAQIVRPDLANPATDPTRSIQA
Ga0318540_105353472	3300032094	Soil	MSRRLKWAAVAVVAVLAAAQLIRPERTNPPTDEGRTIQAHAGTASALAAVLD
Ga0310889_104770021	3300032179	Soil	VSTRLKQAAVVFIIVFAAAQFVRPERANPATDARRTIQAHVGTASGLVAVLDRACS
Ga0310896_103450661	3300032211	Soil	VSRRLKEAAVVFIIVVAAAQFVRPERVSPATDACRTTQAHVGTA
Ga0326726_121634641	3300033433	Peat Soil	MRSRLKQAAVVFAVIIAAAQFVRPDRSNPATEASRTIRAH
Ga0316620_121271661	3300033480	Soil	MNKRLKQAAVAFAVAFAAAQLVRPERANPPIDAGRTIQARVGTASGLSAVLNRACGQCH
Ga0316628_1027948401	3300033513	Soil	VSRRLKRAAVVFVVVFSAAQLVRPERANPPTDARRTIQA
Ga0316628_1036295112	3300033513	Soil	VSRRLKQTAVVLVLAFAAAQLVRPDFANPATDVDRTIQA
Ga0247830_107406343	3300033551	Soil	MSRRLKQGAVAFVVVIAAAQLVRPERSNPATDVKRTIQAHAGTASGLVAV
Ga0364935_0145944_3_116	3300034151	Sediment	MSTRLKQAAVVFIIVFAAAQFVRPERANPATDARRTIQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063548

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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