Metagenome Family F063546

Basic Information
Family ID	F063546
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	76 residues
Representative Sequence	MSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYAIADIPPMACPQCGVSPLVIRLSFADPPPEDEA
Number of Associated Samples	120
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.53 %
% of genes near scaffold ends (potentially truncated)	22.48 %
% of genes from short scaffolds (< 2000 bps)	87.60 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Most Common Taxonomy
Group	Bacteria (52.713 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands (10.078 % of family members)
Environment Ontology (ENVO)	Unclassified (29.457 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (21.705 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.19% β-sheet: 16.19% Coil/Unstructured: 67.62%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
d.252.1.1: CheC-like	d1xkra_	1xkr	0.55
d.252.1.1: CheC-like	d1xkra_	1xkr	0.55
c.55.3.1: Ribonuclease H-like	d1i39a_	1i39	0.52
c.55.3.1: Ribonuclease H-like	d1i39a_	1i39	0.52
d.252.1.1: CheC-like	d1squa_	1squ	0.51
d.15.1.4: Ubiquitin-like	d2al6a3	2al6	0.51
b.29.1.3: Concanavalin A-like lectins/glucanases	d2wkka_	2wkk	0.51
d.252.1.1: CheC-like	d1squa_	1squ	0.51
d.15.1.4: Ubiquitin-like	d2al6a3	2al6	0.51
b.29.1.3: Concanavalin A-like lectins/glucanases	d2wkka_	2wkk	0.51

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF02687	FtsX	11.63
PF04519	Bactofilin	6.20
PF12704	MacB_PCD	6.20
PF02261	Asp_decarbox	3.10
PF03330	DPBB_1	2.33
PF04402	SIMPL	1.55
PF04960	Glutaminase	0.78
PF04471	Mrr_cat	0.78
PF13561	adh_short_C2	0.78
PF03797	Autotransporter	0.78
PF00753	Lactamase_B	0.78
PF13538	UvrD_C_2	0.78
PF04546	Sigma70_ner	0.78
PF00005	ABC_tran	0.78
PF01042	Ribonuc_L-PSP	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	6.20
COG0853	Aspartate 1-decarboxylase	Coenzyme transport and metabolism [H]	3.10
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	1.55
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	1.55
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	1.55
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.78
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.78
COG2066	Glutaminase	Amino acid transport and metabolism [E]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.71 %
Unclassified	root	N/A	47.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.71 %
Unclassified	root	N/A	47.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.71 %
Unclassified	root	N/A	47.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.91 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.16 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2.33 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.55 %
Candidatus Margulisbacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Margulisbacteria	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.29 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	5.43 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.33 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.55 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Candidatus Margulisbacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Margulisbacteria	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.29 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.43 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.33 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	1.55 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Candidatus Margulisbacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Margulisbacteria	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.29 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.43 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.33 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	1.55 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Candidatus Margulisbacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Margulisbacteria	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002120\|C687J26616_10131796	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300002244\|JGI24742J22300_10059203	Not Available	702	Open in IMG/M
3300002407\|C687J29651_10140926	Not Available	788	Open in IMG/M
3300002503\|C687J35164_10201558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Margulisbacteria	569	Open in IMG/M
3300003993\|Ga0055468_10108806	Not Available	789	Open in IMG/M
3300003998\|Ga0055472_10099245	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300004024\|Ga0055436_10284911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	532	Open in IMG/M
3300004058\|Ga0055498_10008141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1297	Open in IMG/M
3300004058\|Ga0055498_10036375	Not Available	814	Open in IMG/M
3300004062\|Ga0055500_10013701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1364	Open in IMG/M
3300004145\|Ga0055489_10190405	Not Available	635	Open in IMG/M
3300005045\|Ga0071328_109752	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300005093\|Ga0062594_103116078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300005093\|Ga0062594_103329915	Not Available	505	Open in IMG/M
3300005183\|Ga0068993_10202235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300005206\|Ga0068995_10008961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1340	Open in IMG/M
3300005213\|Ga0068998_10000925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2721	Open in IMG/M
3300005330\|Ga0070690_101178324	Not Available	610	Open in IMG/M
3300005336\|Ga0070680_100547118	All Organisms → cellular organisms → Bacteria → Proteobacteria	992	Open in IMG/M
3300005338\|Ga0068868_102098536	Not Available	537	Open in IMG/M
3300005434\|Ga0070709_10285908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1200	Open in IMG/M
3300005435\|Ga0070714_100455320	All Organisms → cellular organisms → Bacteria → Proteobacteria	1216	Open in IMG/M
3300005438\|Ga0070701_10848441	Not Available	627	Open in IMG/M
3300005455\|Ga0070663_101314275	Not Available	638	Open in IMG/M
3300005544\|Ga0070686_100820000	Not Available	751	Open in IMG/M
3300005546\|Ga0070696_101045689	Not Available	684	Open in IMG/M
3300006792\|Ga0075530_1042031	All Organisms → cellular organisms → Bacteria → Proteobacteria	1630	Open in IMG/M
3300006865\|Ga0073934_10030203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5244	Open in IMG/M
3300009053\|Ga0105095_10049652	Not Available	2257	Open in IMG/M
3300009053\|Ga0105095_10277540	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300009078\|Ga0105106_10522738	Not Available	853	Open in IMG/M
3300009078\|Ga0105106_11156253	Not Available	549	Open in IMG/M
3300009153\|Ga0105094_10183251	Not Available	1197	Open in IMG/M
3300009153\|Ga0105094_10392578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	803	Open in IMG/M
3300009166\|Ga0105100_10075493	Not Available	1966	Open in IMG/M
3300009810\|Ga0105088_1017336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1108	Open in IMG/M
3300009814\|Ga0105082_1012293	Not Available	1228	Open in IMG/M
3300009818\|Ga0105072_1057788	Not Available	744	Open in IMG/M
3300009819\|Ga0105087_1052601	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300009820\|Ga0105085_1113932	Not Available	538	Open in IMG/M
3300009837\|Ga0105058_1059350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300010029\|Ga0105074_1039508	Not Available	818	Open in IMG/M
3300010399\|Ga0134127_11110492	Not Available	855	Open in IMG/M
3300010400\|Ga0134122_11464177	Not Available	700	Open in IMG/M
3300010401\|Ga0134121_10783782	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300011119\|Ga0105246_10520109	Not Available	1014	Open in IMG/M
3300012469\|Ga0150984_103246758	Not Available	1156	Open in IMG/M
3300012931\|Ga0153915_10236551	Not Available	2018	Open in IMG/M
3300012931\|Ga0153915_10659518	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300012964\|Ga0153916_11336449	Not Available	794	Open in IMG/M
3300013105\|Ga0157369_12203251	Not Available	559	Open in IMG/M
3300013296\|Ga0157374_12762893	Not Available	519	Open in IMG/M
3300014301\|Ga0075323_1043228	Not Available	863	Open in IMG/M
3300014311\|Ga0075322_1166191	Not Available	550	Open in IMG/M
3300014318\|Ga0075351_1014546	All Organisms → cellular organisms → Bacteria → Proteobacteria	1163	Open in IMG/M
3300014320\|Ga0075342_1008161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2214	Open in IMG/M
3300014321\|Ga0075353_1191747	Not Available	541	Open in IMG/M
3300014325\|Ga0163163_10375696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1479	Open in IMG/M
3300015371\|Ga0132258_10034200	All Organisms → cellular organisms → Bacteria → Proteobacteria	11408	Open in IMG/M
3300015372\|Ga0132256_102183919	Not Available	658	Open in IMG/M
3300015373\|Ga0132257_103489322	Not Available	572	Open in IMG/M
3300015374\|Ga0132255_100168002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3077	Open in IMG/M
3300015374\|Ga0132255_103935031	Not Available	631	Open in IMG/M
3300017944\|Ga0187786_10043735	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300017947\|Ga0187785_10001604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7717	Open in IMG/M
3300017947\|Ga0187785_10644669	Not Available	550	Open in IMG/M
3300017959\|Ga0187779_10291403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1042	Open in IMG/M
3300017966\|Ga0187776_10149515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1435	Open in IMG/M
3300017974\|Ga0187777_10242390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1222	Open in IMG/M
3300018064\|Ga0187773_10150380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1200	Open in IMG/M
3300018076\|Ga0184609_10319005	Not Available	726	Open in IMG/M
3300018429\|Ga0190272_10568821	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300025119\|Ga0209126_1151345	Not Available	625	Open in IMG/M
3300025146\|Ga0209322_10079747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1531	Open in IMG/M
3300025155\|Ga0209320_10365935	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300025164\|Ga0209521_10102613	All Organisms → cellular organisms → Bacteria → Proteobacteria	1832	Open in IMG/M
3300025165\|Ga0209108_10319145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	776	Open in IMG/M
3300025310\|Ga0209172_10571008	Not Available	509	Open in IMG/M
3300025313\|Ga0209431_10347554	Not Available	1153	Open in IMG/M
3300025314\|Ga0209323_10554060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	658	Open in IMG/M
3300025319\|Ga0209520_10609712	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300025322\|Ga0209641_10693188	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300025721\|Ga0209587_1079786	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300025796\|Ga0210113_1033676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M
3300025903\|Ga0207680_10396520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	975	Open in IMG/M
3300025906\|Ga0207699_10884783	Not Available	658	Open in IMG/M
3300025918\|Ga0207662_10836788	Not Available	650	Open in IMG/M
3300025919\|Ga0207657_10513661	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300025945\|Ga0207679_12003541	Not Available	527	Open in IMG/M
3300025957\|Ga0210089_1014975	Not Available	869	Open in IMG/M
3300025979\|Ga0210078_1008074	Not Available	1263	Open in IMG/M
3300026067\|Ga0207678_11530840	Not Available	588	Open in IMG/M
3300026075\|Ga0207708_10403671	All Organisms → cellular organisms → Bacteria → Proteobacteria	1131	Open in IMG/M
3300027277\|Ga0209846_1046089	Not Available	674	Open in IMG/M
3300027561\|Ga0209887_1042387	Not Available	1003	Open in IMG/M
3300027577\|Ga0209874_1008469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3068	Open in IMG/M
3300027657\|Ga0256865_1048601	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300027979\|Ga0209705_10413494	Not Available	670	Open in IMG/M
3300029989\|Ga0311365_10831063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300030002\|Ga0311350_11133183	Not Available	698	Open in IMG/M
3300030006\|Ga0299907_10865288	Not Available	676	Open in IMG/M
3300030606\|Ga0299906_10292976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1272	Open in IMG/M
3300030613\|Ga0299915_10257184	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300030619\|Ga0268386_10155538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1740	Open in IMG/M
3300030620\|Ga0302046_10314363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1288	Open in IMG/M
3300031226\|Ga0307497_10030201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1760	Open in IMG/M
3300031229\|Ga0299913_10653658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1031	Open in IMG/M
3300031280\|Ga0307428_1045048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1310	Open in IMG/M
3300031539\|Ga0307380_10467121	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300031565\|Ga0307379_11124782	Not Available	658	Open in IMG/M
3300031707\|Ga0315291_10949108	Not Available	730	Open in IMG/M
3300031746\|Ga0315293_10109934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2331	Open in IMG/M
3300031772\|Ga0315288_11718662	Not Available	505	Open in IMG/M
3300031873\|Ga0315297_10062734	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300031965\|Ga0326597_10023288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	7966	Open in IMG/M
3300031997\|Ga0315278_10696204	Not Available	1034	Open in IMG/M
3300032118\|Ga0315277_10670207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1004	Open in IMG/M
3300032156\|Ga0315295_12092917	Not Available	529	Open in IMG/M
3300032770\|Ga0335085_10856339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	995	Open in IMG/M
3300032782\|Ga0335082_11355025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300032783\|Ga0335079_10522011	Not Available	1264	Open in IMG/M
3300032828\|Ga0335080_10040182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	5142	Open in IMG/M
3300032892\|Ga0335081_10740286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1185	Open in IMG/M
3300033158\|Ga0335077_10372188	Not Available	1543	Open in IMG/M
3300033407\|Ga0214472_10165085	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300033433\|Ga0326726_10290114	All Organisms → cellular organisms → Bacteria → Proteobacteria	1533	Open in IMG/M
3300033486\|Ga0316624_11988802	Not Available	539	Open in IMG/M
3300033759\|Ga0314869_007872	Not Available	631	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.82%
Host-Associated	Host-Associated	13.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.69%
Aquatic	Environmental → Aquatic	27.13%
Plants	Host-Associated → Plants	13.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.36%
Freshwater	Environmental → Aquatic → Freshwater	13.95%
Marine	Environmental → Aquatic → Marine	10.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.65%
Peat	Environmental → Terrestrial → Peat	2.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.55%
Sediment	Environmental → Aquatic → Sediment	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.28%
Loam	Environmental → Terrestrial → Soil → Loam	12.40%
Wetlands	Environmental → Aquatic → Marine → Wetlands	10.08%
Sand	Environmental → Terrestrial → Soil → Sand	7.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.20%
Lake	Environmental → Aquatic → Freshwater → Lake	5.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.55%
Clay	Environmental → Terrestrial → Soil → Clay	1.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.55%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.95%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	10.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	7.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.20%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.43%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.10%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.55%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.55%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	10.08%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	6.20%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.43%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.43%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.65%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	4.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.33%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.33%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.55%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.55%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.78%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300002503	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300006792	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D	Environmental	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300025119	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_1 (SPAdes)	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025721	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025957	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025979	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031280	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-240	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033759	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_B	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26616_101317961	3300002120	Soil	LSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYKLADIPPMACPQCGVSPLVIRLSFADPPPEAEGEAE*
JGI24742J22300_100592031	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	MSDXTLGVIKAHNMEINALCQNEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGLGPLAIRLSFVDPPREEDET*
C687J29651_101409262	3300002407	Soil	MSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYLLADIPPMACPQCGVSPLVIRLSFADPPSEGEGEAE*
C687J35164_102015582	3300002503	Soil	MSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIXGVGPDYXLADIPPMACPQCGVSPLVIRLSFADPPPEAEGEAE*
Ga0055468_101088062	3300003993	Natural And Restored Wetlands	MSDWTLGAVKARNMEIVALCEAESCRHMFVFDLDALIAGVGPDYPLDDIPAMDCPRCGTSPLTIRLSFADPPPEAEV*
Ga0055472_100992451	3300003998	Natural And Restored Wetlands	MSDWTLGAVKARNMEIVALCEQDSCRHMFVFDLDALIAGVGPDYPLDDIPAMDCPRCGTSPLTIRLSFADPPPEA
Ga0055436_102849111	3300004024	Natural And Restored Wetlands	MSDWTLGAIKARNMEINALCDQEACRHLFVFNLDALIEGVGPDYPLADFPPMECPACGTGPLTIRLSFAEPPPSPEDEAE
Ga0055498_100081411	3300004058	Natural And Restored Wetlands	MSDWTFGDVQARNMEIVALCEQEGCRHLFSFDLDQLIEGAGADYTVADIPPMTCPTCGAGLLAIRL
Ga0055498_100363752	3300004058	Natural And Restored Wetlands	MSDWTLGAVKARNMEINALCDIEACRHLFIFNLDMLIEGVGADYKLADIPPMDCPKCGAGPLAIRLSFVDPRREEDEA*
Ga0055500_100137011	3300004062	Natural And Restored Wetlands	RNMEIVALCEQEGCRHLFSFDLDQLIEGAGADYKVADIPPMTCPTCGAGLLAIRLSFAEPPPEGEG*
Ga0055489_101904051	3300004145	Natural And Restored Wetlands	SVAMQHRGAGGAVKARNMEIVALCEAESCRHMFSFDLDALIAGVGPDYRLADIPPLACPKCGASPLTLRLSFADPPAAEE*
Ga0071328_1097521	3300005045	Permafrost	RNMEIVALCEQDSCRHMFVFDLDALIAGVGPDYPLDDIPPMPCPRCDVSPLTIRLSFADPPPESDED*
Ga0062594_1031160782	3300005093	Soil	MSDWTLGAVKERGMEINALCQNEACRHLFTFNLDALIEGAGADFLLADIPPMECPACGVRPLAIRLS
Ga0062594_1033299151	3300005093	Soil	MSDWTLGVIKAHNMEINALCQNEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGLGPLAIRLSFVDPPRE
Ga0068993_102022351	3300005183	Natural And Restored Wetlands	MSDWTLGAIKARNMEINALCAQEACRHLFVFNLDALIEGVGPDYPLADFPPMECPACGTGPLTIRLSFAESPPSPEDEAE*
Ga0068995_100089614	3300005206	Natural And Restored Wetlands	MSDWTFGDVQARSMEIVALCEQEGCRHLFSFDLDQLIEGAGADYTVADIPPMTCPTCGAGLLAIRLSFAEPPPEGEG*
Ga0068998_100009255	3300005213	Natural And Restored Wetlands	MSDWTFGDVQARNMEIVALCEQEGCRHLFSFDLDQLIEGAGADYTVADIPPMTCPTCGAGLLAIRLSFAEPPPEGEG*
Ga0070690_1011783241	3300005330	Switchgrass Rhizosphere	MSDWTLGVIKAHNMEINALCQNEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGLGPLAIRLSFVDPPREEDET*
Ga0070680_1005471183	3300005336	Corn Rhizosphere	MEINALCQNEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGLGPLAIRLSFVDPPREEDET*
Ga0068868_1020985361	3300005338	Miscanthus Rhizosphere	NMEINALCQHEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGLGPLAIRLSFVDPPREEDET*
Ga0070709_102859082	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSDWTLGAIKARNMEIVALCEQESCRHLFIFDLDQLIDKVGADYKVGDIPPLTCPACGVKPLTIRLSFAEPLPGDG*
Ga0070714_1004553201	3300005435	Agricultural Soil	LGDVKARNMEIVALCEQESCRHLFIFDLDQLIDKVGADYKVGDIPPLTCPACGVKPLTIRLSFAEPLPGDG*
Ga0070701_108484411	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSDWTLGVIKAHNMEINALCQNEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGLGPLAIRLSFVDPPREEEEA*
Ga0070663_1013142752	3300005455	Corn Rhizosphere	MSDWTLGAIKARNMEINALCQNEACRHLFTFNLDALIEGAGADFLLADIPPMECPACAVGPLAIRLSFVDPPREEEEA*
Ga0070686_1008200002	3300005544	Switchgrass Rhizosphere	MSDWTLGVIKAHNMEINALCQNEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGLGPLAIRLSFV
Ga0070696_1010456891	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSDWTLGAVKQRGMEINALCQNEACRHLFTFDLEALIEGAGADFLLADIPPMECPACGVGPLAIRLSFIDPPREEDEA*
Ga0075530_10420313	3300006792	Arctic Peat Soil	MSDWTLGAVKARNMEINALCDQEGCRHLFIFNLDQLIEGVGPDYAIADIPPMTCPRCGVSPLTIRLSFADPPPEAEDD*
Ga0073934_100302031	3300006865	Hot Spring Sediment	MSDWTLGAVKARNMEIVALCEAEGCGHLFSFDLDALIEGVGPDHPLAEIPPLACPRCGVAPLLIRLSFPDPPQEQD*
Ga0105095_100496522	3300009053	Freshwater Sediment	MSDWTLGAVKARGMEINALCENQACRHLFTFDLEALIEGAGADFPLADIQPMDCPACGVGPLVIRISFVEPQRDEES*
Ga0105095_102775403	3300009053	Freshwater Sediment	MSDWTLGAVKSRNMEIVALCEAESCRHMFVFDLDALIAGVGPDYALDDIPVMDCPRCGISPLTIRLSFADPPPEIDED*
Ga0105106_105227383	3300009078	Freshwater Sediment	MSDWTLGAVKARGMEINALCENQACRHLFTFNLEALIEGAGADFPLGDIPPMDCPACGGGPLVIRISFVEPQRDEES*
Ga0105106_111562531	3300009078	Freshwater Sediment	VSDWTLGAVKARNMEIVALCEAESCRHMFVFDLDALIAGVGPDYALDDIPVMDCPRCGISPLTIRLSFADPPPEAEE*
Ga0105094_101832511	3300009153	Freshwater Sediment	TRGMEINALCENQACRHLFTFDLEALIEGAGADFPLADIPPMDCPACGAGPLVIRISFVEPQRDEES*
Ga0105094_103925781	3300009153	Freshwater Sediment	MSDWTLGAVKSRNMEIVALCEAESCRHMFVFDLDALIAGVGPDYALDDIPVMDCPRCGISPLTIRLSFADPPPEAEE*
Ga0105100_100754933	3300009166	Freshwater Sediment	MSDWTLGAVKARGMEINALCENQACRHLFTFNLEALIEGAGADFPLADIQPMDCPACGVGPLVIRISFVEPQRDEES*
Ga0105088_10173363	3300009810	Groundwater Sand	LSDWTLGLVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYKLADIPPMACPQCGVSPLVIRLSFADPPPEDEEED*
Ga0105082_10122932	3300009814	Groundwater Sand	MSDWTLGAVKARNMEINAFCDQEGCRHLFVFNLDALIEGVGADYPLADIPPMACPQCGVSPLVIRLSFADPPPEDD*
Ga0105072_10577882	3300009818	Groundwater Sand	MSDWTLGAVKARNMEINALCDQEGCRHLFVFNLDALIEGVGPDFPLADIPPMTCPACGGGMLVIRLSFADPPPEDD*
Ga0105087_10526011	3300009819	Groundwater Sand	LSDWTLGAVKARNMEINALCDQEGCRHLFVFNLDQLIEGVGADYKLADIPPMACPQCGVSPLVIRLS
Ga0105085_11139322	3300009820	Groundwater Sand	MSDWTLGAVKARNREIVALCDQEGCQHLFIFNLDQLIEGVGPDFPLADIPPMACPQCGVSPLVIRLSFADPPPQPEDEAE*
Ga0105058_10593503	3300009837	Groundwater Sand	MSDWTLGAVKARNMEINALCDQEGCRHLFVFNLDALIEGVGPDFPLADIPPMTCPACGGGMLVIRLSFADPPARSRGLGLCCHARVGGHLVT
Ga0105074_10395082	3300010029	Groundwater Sand	MSDWTLGAVKARNMEINALCDQEGCRHLFVFNLDALIEGVGADYPLADIPPMTCPACSGGPLVIRLSFADPPPQPEDEAE*
Ga0134127_111104923	3300010399	Terrestrial Soil	MSDWTLGAVKARNMEINALCQNEACRHLFTFNLDALIEGAGADFLLADIPPMECPACGVGPLAIRLSFVDPPREEEEA*
Ga0134122_114641771	3300010400	Terrestrial Soil	MSDWTLGAIKARNMEINALCHNEACRHLFTFNLDALIEGAGADFLLADIPPMECPACRVGPLAIRISFVDPPHEEASVRWRSVNRISDLRRG
Ga0134121_107837821	3300010401	Terrestrial Soil	MSDWTLGAIKARNMEINALCQNEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGLGPLAIRLSFVDPPREEDET*
Ga0105246_105201093	3300011119	Miscanthus Rhizosphere	MSDWTLGAIKARNMEINALCQNEACRHLFTFNLDALIEGAGADFLLADIPSMECPACGVGSLALRLSFVDPPREEEEA*
Ga0150984_1032467582	3300012469	Avena Fatua Rhizosphere	MSDWTLGAIKTRNMEINALCQNDACRHLFTFNLDALIEGAGADFLLADIPPMECPACGVGPLAIRLSFVDPPREEEEA*
Ga0153915_102365511	3300012931	Freshwater Wetlands	MSDWTFGAVKARNMEIVALCEQEGCRHLFTFDLDQLIEGAGADYKVADIPPMTCPACGAELLAIRISFAEPPPEGEG*
Ga0153915_106595183	3300012931	Freshwater Wetlands	MSDWTFGSVKARNMEILALCDQESCRHLFTFNLDQLIEGAGADYKVADSPPMTCPACGAGLLAIRLSFAEPPLEREG*
Ga0153916_113364492	3300012964	Freshwater Wetlands	MSDWTLGAVKARDMEINALCDIEACRHLFIFNLDMLIEGVGADYKLADIPPMDCPRCGVGPLAVRLSFVDPPRDDEKA*
Ga0157369_122032511	3300013105	Corn Rhizosphere	TLGAIKARNMEINALCQNEACRHLFTFNLDALIEGAGADFLLADIPPMECPACGLGPLAIRLSFVDPPREEDET*
Ga0157374_127628932	3300013296	Miscanthus Rhizosphere	MSDWTLGAIKARNMEINALCQNEACRHLFTFNLDALSEGAGAAFLLADIPPMACPACRLGPLTIRL
Ga0075323_10432281	3300014301	Natural And Restored Wetlands	VSDWTLGAVKARNMEIVALCEQEGCRHMFVFNLDELIEGVGADYKLADIPPLSCPRCGVEPLLIRLSFPDPPEPEAD*
Ga0075322_11661911	3300014311	Natural And Restored Wetlands	MSDWTLGAVKARNMEIVALCEQEGCRHMFVFNLDELIEGVGADYKLADIPPLSCPRCGVEPLLIRLSF
Ga0075351_10011274	3300014318	Natural And Restored Wetlands	MEIVALCEQEGCRHLFSFDLDQLIEGAGADYTVADIPPMTCPTCGAGLLAIRLSFAEPPPEGEG*
Ga0075351_10145461	3300014318	Natural And Restored Wetlands	MSDWTLGAVKARNMEINALCDIEACRHLFIFNLDMLIEGVGADYKLADIPPMDCPKCGAGPLAIRLSFVDP
Ga0075342_10081613	3300014320	Natural And Restored Wetlands	MSDWTLGAVKARNMEIVALCEAESCRHMFSFDLDALIAGVGPDYRLADIPPLACPKCGASPLTLRLSFADPPPEAED*
Ga0075353_11917472	3300014321	Natural And Restored Wetlands	MSDWTLGAIKARNMEINALCAQEACRHLFVFNLDALIEGVGPDYLLADFPPMECPACGTGPLTIRLSFAEPPPNPEDEAE*
Ga0163163_103756963	3300014325	Switchgrass Rhizosphere	MSDWTLGAIKARNMEINALCQNEACRHLFTFNLDALIEGAGADFLLADIPPMECPACRVGPLAIRISFVDPPHEEASVRWR
Ga0132258_100342003	3300015371	Arabidopsis Rhizosphere	MSDWTFGDVKVRNMEIVALCEREGCRHLFTFNFDQLIEGAGADYKVADIPPMACPACGAGTLVVRLSFAEPPPPEGED*
Ga0132256_1021839192	3300015372	Arabidopsis Rhizosphere	VIKAHNMEINALCQNEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGVGPLAIRLSFIDPPREEDEA*
Ga0132257_1034893222	3300015373	Arabidopsis Rhizosphere	MSDWTLGAVKERGMEINALCQNEACRHLFTFNLDALIEGAGADFLLADIPPMECPACGVGPLAIRLSFIDPPREEDEARGPDR*
Ga0132255_1001680022	3300015374	Arabidopsis Rhizosphere	MSDWTLGDVKARNMEIVALCEQESCRHLFVFDLDQLIEGVGADYKLADFPPMACPAWGAIRLSFADIPPDEDG*
Ga0132255_1039350312	3300015374	Arabidopsis Rhizosphere	MSDWTLGAVKERGMEINALCQNEACRHLFTFNLDALIEGAGADFLLADIPPMECPACGVGPLAIRLSFIDPPREEDEA*
Ga0187786_100437351	3300017944	Tropical Peatland	MSDWTLGDIKARNMEIVALCEQESCHHLFVFDLDQLIEGVGAGYKLADFPPMVCPACGAEPLAIRLSFADTPPDEDG
Ga0187785_100016041	3300017947	Tropical Peatland	MSDWTLGDIKARNMEIVALCEQESCHHLFVFNLDQLIEGVGAGYKLADFPPMACPACGAEPLAIRLSFADIHPDKDG
Ga0187785_106446691	3300017947	Tropical Peatland	MSEWTLGQIKARNMEILALCESEGCGHLGIFNLDQLIEGVGEDFALTDVPSMSCPRCGQPLAIRLSFADPLPEEEAP
Ga0187779_102914031	3300017959	Tropical Peatland	MSEWTLGQIKARNMEILALCESQGCGHLGIFNLDQLIEGVGEDFALADVPAMSCPRCDQPLAIRLSFADPLPEGEAP
Ga0187776_101495152	3300017966	Tropical Peatland	MSDWTLGDIKARNMEIVALCEQESCHHLFVFNLDQLIEGVGAGYKLADFPPMVCPACGAEPLAIRLSFADTPPDEDG
Ga0187777_102423902	3300017974	Tropical Peatland	MSEWTLGQIKAHNMEILALCESEGCGHLGIFNLDQLIEGVGEDFTLADAPPMSCPRCGQPLAIRLSFADPLPEEEAP
Ga0187773_101503803	3300018064	Tropical Peatland	MSDWTLGDIKARNMEIVALCEQESCHHLFVFNLDQLIEGVGAGYKLADFPPMACPACGAEPLAIRLSFADTPPDEDG
Ga0184609_103190052	3300018076	Groundwater Sediment	MSDWTLGAVKARNMEINAFCEQEGCRHFFVFNLDALIEGVGPDYAIADIPPMTCPRCGVSPLAIRLSFADPPPEDEA
Ga0190272_105688212	3300018429	Soil	MSDWTLGAVKARNMEIDALCDQEGCRHLFIFNLDQLIEGVGPDYKLADIPPMTCPRCGVSPLTIRLSFANPPPEGEDEA
Ga0209126_11513451	3300025119	Soil	MSDWTLGAVKARNMEINALCDRQGCRHLFIFNLDQLIEGVGPDYAIADIPPMACPQCGVSPLVIRLSFADLPPEDEA
Ga0209322_100797471	3300025146	Soil	MSDWTLGAVKARNMEINALCDRQGCRHLFVFNLDQLIEGVGPDYAIADIPPMACPQCGVSPLVIRLSFADPPPEDEA
Ga0209320_103659352	3300025155	Soil	MSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDALIEGVGADYPLADIPPMTCPACSGGPLVIRLSFADPPPEEGEGEAD
Ga0209521_101026131	3300025164	Soil	MSDWTLGAVKARNMEINALCDRQGCRHLFVFNLDQLIEGVGPDYAIADIPPMACPQCGVSPLVIRLSFADPPPEAEGEAE
Ga0209108_103191451	3300025165	Soil	RLGAGLGARELSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYAIADIPPMACPQCGVSPLVIRLSFADPPPEAEGEAE
Ga0209172_105710081	3300025310	Hot Spring Sediment	MSDWTLGAVKARNMEIVALCEAEGCGHLFSFDLDALIEGVGPDHPLAEIPPLACPRCGVAPLLIRLSFPDPPQEQD
Ga0209431_103475541	3300025313	Soil	LSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYKLADIPPMACPQCGVSPLVIRLSFADPPPEAEGEAE
Ga0209323_105540602	3300025314	Soil	MSDWTLGAVKARNMEINALCDRQGCRHLFVFNLDQLIEGVGPDYAIADIPPMACPQCGVSPLVIR
Ga0209520_106097121	3300025319	Soil	MSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYAIADIPPMACPQCGVSPLVIRLSFADPPPEDEA
Ga0209641_106931882	3300025322	Soil	MSDWTLGAVKARNMEINALCDRQGCRHLFVFNLDQLIEGVGPDYAIADIPPMACPQCGVSPLVIRLSFADLPPEDEA
Ga0209587_10797861	3300025721	Arctic Peat Soil	MSDWTLGAVKARNMEINALCDQEGCRHLFIFNLDQLIEGVGPDYAIADIPPMTCPRCGVSPLTIRLSFADPPPEAEDD
Ga0210113_10336761	3300025796	Natural And Restored Wetlands	MSDWTLGAVKARNMEIVALCEAESCRHMFVFDLDALIAGVGPDYPLDDIPAMDCPRCGTSPLTIRLSFADPPPEAEV
Ga0207680_103965201	3300025903	Switchgrass Rhizosphere	MSDWTLGVIKAHNMEINALCQNEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGLGPLAIRLSFVDPPREEEEA
Ga0207699_108847832	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSDWTLGAIKARIMDVALCEQESCRHLFIFDLDQLIDKVGADYKVGDIPPLTCPACGVKPLTIRLSFAEPLPGDG
Ga0207662_108367882	3300025918	Switchgrass Rhizosphere	MSDWTLGVIKAHNMEINALCQNEACRHLFTFNLDALIEGAGADFLLNDIPSMECPACGVGPLAIRLSFVNPTREEEEA
Ga0207657_105136611	3300025919	Corn Rhizosphere	MSDWTLGAIKARNMEINALCQNEACRHLFTFNLDALSEGAGADFLLADIPPMECPACGLGPLAIRLSFVDPPREEDET
Ga0207679_120035412	3300025945	Corn Rhizosphere	MSDWTLGAIKARNMEINALCQNEACRHLFTFNLDALIEGAGADFLLADIPPMECPACGVGPLAIRLSFVDPPREEEEA
Ga0210089_10149752	3300025957	Natural And Restored Wetlands	MSDWTLGAVKARNMEINALCDIEACRHLFIFNLDMLIEGVGADYKLADIPPMDCPKCGAGPLAIRLSFVDPRREEDEA
Ga0210078_10080742	3300025979	Natural And Restored Wetlands	MSDWTFGDVQARNMEIVALCEQEGCRHLFSFDLDQLIEGAGADYTVADIPPMTCPTCGAGLLAIRLSFAEPPPEGEG
Ga0207678_115308401	3300026067	Corn Rhizosphere	MSDWTLGAIKARNMEINALCQNEACRHLFTFNLDALIEGAGADFLLTDIPPMECPACAVGPLAIRLSFVDPPREEEEA
Ga0207708_104036711	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MEINALCQNEACRHLFTFKLDALIEGAGADFLLADIPPMECPACGVGPLAIRLSFVDPPREEEEA
Ga0209846_10460892	3300027277	Groundwater Sand	LSDWTLGLVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYKLADIPPMACPQCGVSPLVIRLSFADPPPEDEEED
Ga0209887_10423872	3300027561	Groundwater Sand	MSDWTLGAVKARNMEINAFCDQEGCRHLFIFNLDQLIEGVGPDFPLADIPPMTCPACSGGPLVIRLSFADPPPQPEDEAE
Ga0209874_10084691	3300027577	Groundwater Sand	MSDWTLGAVKARNMEINALCDQEGCRHLFVFNLDALIEGVGPDFPLADIPPMTCPACSGGPLVIRLSFADPPPEDD
Ga0256865_10486012	3300027657	Soil	MSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYLLADIPPMACPQCGVSPLVIRLSFADPPPEEGEGEAD
Ga0209705_104134942	3300027979	Freshwater Sediment	MSDWTLGAVKTRGMEINALCENQACRHLFTFNLEALIEGAGADFPLGDIPPMDCPACGGGPLVIRISFVEPQRDEES
Ga0311365_108310633	3300029989	Fen	MSEWTLGSVKERNMEINALCATEGCRHLYVFDLDALIEGAGAEYAVADIPPMTCPRCDGPLAIRLSFVQPEPDEE
Ga0311350_111331831	3300030002	Fen	MSEWTLGSVKERNMEINALCATEGCRHLYVFDLDALIEGAGADYAVADIPPMTCPRCDGPLLIRLSFVQPEPDEE
Ga0299907_108652881	3300030006	Soil	MSEWTLGAIKARGMELVALCEAEGCRQLFAFNLEALIEGAGPDFLIADIPAMACPQCGASPLAIRLSFPDPPPEDA
Ga0299906_102929761	3300030606	Soil	WTLGAVKVRNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYLLADIPPMACPQCGVSPLVIRLSFADPPSEGEGEAE
Ga0299915_102571842	3300030613	Soil	MSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYKLADIPPMACPQCGVSPLVIRLSFADPPPEAEGEAE
Ga0268386_101555382	3300030619	Soil	MSDWTLGAVKARNMEIVALCEAEACNHLFAFDLDALIEGAGADFRLDDIPAMNCPRCGAGPLLIRLSFPGKPEAED
Ga0302046_103143631	3300030620	Soil	MSDWTLGAVKARNMEINALCEQESCRHLFTFDLDALIAGVGPDYKLDDIPPMECPRCGVNPLAIRLSF
Ga0307497_100302014	3300031226	Soil	MSDWTFGDVKARNMEIVALCEREGCRHLFTFNLDQLIEGAGADYKVADIPPMACPACGAGTLVVRLSFAEPPPPEGED
Ga0299913_106536582	3300031229	Soil	MSDWTLGAVKAHNMQLVALCENADCRHLFAFDLDALIEGAGADFRLDDIPAMNCPRCGAGPLLIRLSFPGKPEAED
Ga0307428_10450482	3300031280	Salt Marsh	MSDWTVGAVKARKMEIVALCEEESCRHMFAFNLDALIEGVGPDYKLDDIPPLTCPKCGVGPIVIRLSFADPPPEAED
Ga0307380_104671211	3300031539	Soil	VSDWTLGAVKARNMQIVALCEAGSCRHMFAFDLDALIAGVGPAYALDDIPPMACPNCGASPLTIRLSFADPPPEDESSP
Ga0307379_111247822	3300031565	Soil	VSDWTLGAVKAGNMQIVALCEAGSCRHMFAFDLDALIAGVGPAYALDDIPQMACPNCGASPLTIRLSFADPPPDDE
Ga0315291_109491081	3300031707	Sediment	MSDWTLGAVKARNMEINALCEKEGCRHFFTFNLDALIEGVGPDYPLADIPPMECPACGEGLLVIRLSFADPPPQPEDEAE
Ga0315293_101099344	3300031746	Sediment	MSDWTLGAVKARNMEINALCEKEGCRHLFTFNLDALIEGVGPDYPLADIPPMECPACGEGQLVI
Ga0315288_117186621	3300031772	Sediment	SEMSDWTLGAVKTRNMEINALCEKEGCRHLFTFNLDALIEGVGPDYPLADIPPVECPACGQGQLVIRLSFVDPAPEPEDE
Ga0315297_100627345	3300031873	Sediment	MSDWTLGAVKARNMEINALCEKEGCRHLFTFNLDALIEGVGPDYPLADIPPMECPACGEGQLVIRLSFVDPAPEPEHE
Ga0326597_100232882	3300031965	Soil	MSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYLLADIPPMACPQCGVSPLVIRLSFADPPSEGEGEAE
Ga0315278_106962042	3300031997	Sediment	MSDWTLGAVKTRNMEINALCEKEGCRHLFTFNLDALIEGVGPDYPLADIPPVECPACGQGQLVIRLSFVDPAPEPEDE
Ga0315277_106702071	3300032118	Sediment	MGDWTLGAVKARNMEINALCEKEGCRHLFTFNLDALIEGVGPDYPLADIPPMECPACDQGQLVIRLSFVDPAPEPEDE
Ga0315295_120929172	3300032156	Sediment	MSDWTLGAVKARNMEINALCEKEGCRHLFTFNLDALIEGVGPDYPLADIPPMECPACGQGLLVIRLSFVDPAPQPEDEAE
Ga0335085_108563392	3300032770	Soil	MSDWTLGAIKARNMEIVALCEQESCRHLFIFDLDQLIDKVGADYKVGDIPPLTCPACGVEPLTIRLSFAEPLPGDG
Ga0335082_113550252	3300032782	Soil	MSDWTLGAIKARNMEIVALCEQESCRHLFVFDLDQLIEGMGPDYKVRDIPPLSCPACGVEPLTIRLSFAEPLSGDEG
Ga0335079_105220113	3300032783	Soil	TLGTIKARNMEIVALCEQGSCRHLFVFDLDQLIEGMGPDYKVRDIPPLSCPACGVEPLTIRLSFAEPLSGDEG
Ga0335080_100401825	3300032828	Soil	MSDWTLGAIKARNMEIVALCEQGSCRHLFVFDLDQLIEGMGPDYKVRDIPPLSCPACGVEPLTIRLSFAEPLSGDEG
Ga0335081_107402862	3300032892	Soil	MSDWTLGTIKARNMEIVALCEQESCRHLFVFDLDQLIEGMGPDYKVRDIPPLSCPACGVEPLTIRLSFAEPLSGDEG
Ga0335077_103721882	3300033158	Soil	MSDWTLGTIKARNMEIVALCEQGSCRHLFVFDLDQLIEGMGPDYKVRDIPPLSCPACGVEPLTIRLSFAEPLSGDEG
Ga0214472_101650853	3300033407	Soil	LSDWTLGAVKARNMEIVALCDQEGCRHLFVFNLDQLIEGVGPDYKLADIPPMACPQCGVSPLVIRLSFADPPAGSRGRG
Ga0326726_102901142	3300033433	Peat Soil	MSDWTLGAVKERGMEINALCQNEACRHLFTFNLDALIEGAGADFLLADIPPMECPACGVGPLAIRLSFIDPPREEDEA
Ga0316624_119888022	3300033486	Soil	MSDWTFGSVKARNMEILALCEQESCRHLFTFNLDQLIEGAGADYKVADIPPMACPACGAGTLVIRLSFAEPPPPEGED
Ga0314869_007872_46_279	3300033759	Peatland	MSDWTLGDIKARNMEIVALCEQESCHHLFVFNLDQLIEGVSAGYKLADFPPMACPACGAEPLAIRLSFADTPPDEDG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063546

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign