Metagenome Family F063460

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063460
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	60 residues
Representative Sequence	VSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVREAEQAA
Number of Associated Samples	109
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.46 %
% of genes near scaffold ends (potentially truncated)	22.48 %
% of genes from short scaffolds (< 2000 bps)	81.40 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.822 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (8.527 % of family members)
Environment Ontology (ENVO)	Unclassified (21.705 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.612 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.54% β-sheet: 0.00% Coil/Unstructured: 38.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
a.2.5.1: Prefoldin	d1fxkc_	1fxk	0.89329
a.26.1.1: Long-chain cytokines	d1cnt1_	1cnt	0.88614
a.24.23.1: Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain	d1szia_	1szi	0.88177
a.23.1.1: HSC20 (HSCB), C-terminal oligomerisation domain	d1fpoa2	1fpo	0.87521
a.25.1.1: Ferritin	d6txia_	6txi	0.8668

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF06983	3-dmu-9_3-mt	34.88
PF07690	MFS_1	17.05
PF14542	Acetyltransf_CG	2.33
PF00535	Glycos_transf_2	2.33
PF02515	CoA_transf_3	2.33
PF12902	Ferritin-like	1.55
PF12697	Abhydrolase_6	0.78
PF07730	HisKA_3	0.78
PF07883	Cupin_2	0.78
PF12850	Metallophos_2	0.78
PF13417	GST_N_3	0.78
PF12840	HTH_20	0.78
PF01022	HTH_5	0.78
PF00480	ROK	0.78
PF14535	AMP-binding_C_2	0.78
PF01594	AI-2E_transport	0.78
PF00801	PKD	0.78
PF11799	IMS_C	0.78
PF03176	MMPL	0.78
PF00230	MIP	0.78
PF02080	TrkA_C	0.78
PF04542	Sigma70_r2	0.78
PF01042	Ribonuc_L-PSP	0.78
PF12802	MarR_2	0.78
PF00149	Metallophos	0.78
PF06224	HTH_42	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	34.88
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	34.88
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.33
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.55
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.78
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.78
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.78
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.78
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.78
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.78
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.78
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.78
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.78
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.78
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.82 %
Unclassified	root	N/A	13.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.82 %
Unclassified	root	N/A	13.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.82 %
Unclassified	root	N/A	13.18 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	75.97 %
Unclassified	root	N/A	13.18 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.19 %
Unclassified	root	N/A	13.18 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	51.16 %
Unclassified	root	N/A	13.18 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	25.58 %
Unclassified	root	N/A	13.18 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.10 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.55 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.78 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.78 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.58 %
Unclassified	root	N/A	13.18 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.10 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.55 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.78 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.78 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.58 %
Unclassified	root	N/A	13.18 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.10 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.55 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.78 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.78 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101444101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300001978\|JGI24747J21853_1003353	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300003659\|JGI25404J52841_10141420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300003911\|JGI25405J52794_10067621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	777	Open in IMG/M
3300004114\|Ga0062593_100104328	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300004114\|Ga0062593_100435381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1188	Open in IMG/M
3300004114\|Ga0062593_100702203	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300004114\|Ga0062593_101389622	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300004156\|Ga0062589_101107459	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300004156\|Ga0062589_102017967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300004479\|Ga0062595_100166258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1311	Open in IMG/M
3300004479\|Ga0062595_101921962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300004643\|Ga0062591_101361057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300005093\|Ga0062594_100155771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1507	Open in IMG/M
3300005167\|Ga0066672_10034899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2784	Open in IMG/M
3300005171\|Ga0066677_10300384	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005184\|Ga0066671_10289985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300005184\|Ga0066671_10641034	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005332\|Ga0066388_100094773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3425	Open in IMG/M
3300005332\|Ga0066388_100687720	Not Available	1632	Open in IMG/M
3300005332\|Ga0066388_104492516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300005336\|Ga0070680_100431543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1124	Open in IMG/M
3300005337\|Ga0070682_100006737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6445	Open in IMG/M
3300005338\|Ga0068868_102414229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300005355\|Ga0070671_100768442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	838	Open in IMG/M
3300005434\|Ga0070709_10076084	All Organisms → cellular organisms → Bacteria	2179	Open in IMG/M
3300005437\|Ga0070710_10052363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2295	Open in IMG/M
3300005440\|Ga0070705_101928964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300005445\|Ga0070708_100040156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4097	Open in IMG/M
3300005454\|Ga0066687_10838275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300005539\|Ga0068853_101850890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300005544\|Ga0070686_100101924	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300005549\|Ga0070704_101375387	Not Available	647	Open in IMG/M
3300005564\|Ga0070664_100134145	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300005615\|Ga0070702_100975469	Not Available	669	Open in IMG/M
3300005713\|Ga0066905_100037551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2833	Open in IMG/M
3300005713\|Ga0066905_100283333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1292	Open in IMG/M
3300005764\|Ga0066903_100296497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2553	Open in IMG/M
3300005764\|Ga0066903_102283687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1045	Open in IMG/M
3300005840\|Ga0068870_10398249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	895	Open in IMG/M
3300005937\|Ga0081455_10000836	All Organisms → cellular organisms → Bacteria	39643	Open in IMG/M
3300005937\|Ga0081455_10800007	Not Available	592	Open in IMG/M
3300005983\|Ga0081540_1002691	All Organisms → cellular organisms → Bacteria	14453	Open in IMG/M
3300006032\|Ga0066696_10903647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300006058\|Ga0075432_10014159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2715	Open in IMG/M
3300006806\|Ga0079220_10240891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1075	Open in IMG/M
3300006806\|Ga0079220_10380547	Not Available	912	Open in IMG/M
3300006854\|Ga0075425_100260404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1995	Open in IMG/M
3300006871\|Ga0075434_100572847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1148	Open in IMG/M
3300006871\|Ga0075434_101805415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300006881\|Ga0068865_101137878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300006954\|Ga0079219_10947514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300009012\|Ga0066710_100634839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1623	Open in IMG/M
3300009012\|Ga0066710_101624940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	989	Open in IMG/M
3300009090\|Ga0099827_10685609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300009094\|Ga0111539_12767334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300009137\|Ga0066709_101775502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300009147\|Ga0114129_10839220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1169	Open in IMG/M
3300009840\|Ga0126313_10044587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3103	Open in IMG/M
3300009840\|Ga0126313_10165140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300010038\|Ga0126315_10179739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1266	Open in IMG/M
3300010040\|Ga0126308_10136021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1540	Open in IMG/M
3300010041\|Ga0126312_10010636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6159	Open in IMG/M
3300010043\|Ga0126380_11721912	Not Available	564	Open in IMG/M
3300010045\|Ga0126311_10175667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1546	Open in IMG/M
3300010329\|Ga0134111_10487537	Not Available	539	Open in IMG/M
3300010359\|Ga0126376_11015795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	831	Open in IMG/M
3300010359\|Ga0126376_13196212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300010360\|Ga0126372_10394897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1260	Open in IMG/M
3300010362\|Ga0126377_10692047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1071	Open in IMG/M
3300010362\|Ga0126377_11822243	Not Available	684	Open in IMG/M
3300011119\|Ga0105246_10307511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1283	Open in IMG/M
3300012350\|Ga0137372_10507581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300012354\|Ga0137366_10668063	All Organisms → cellular organisms → Bacteria → Terrabacteria group	742	Open in IMG/M
3300012356\|Ga0137371_10263040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1347	Open in IMG/M
3300012510\|Ga0157316_1024173	Not Available	689	Open in IMG/M
3300012905\|Ga0157296_10034343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1100	Open in IMG/M
3300012913\|Ga0157298_10059395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	912	Open in IMG/M
3300012958\|Ga0164299_10921592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300014497\|Ga0182008_10973017	Not Available	504	Open in IMG/M
3300014969\|Ga0157376_10031818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4230	Open in IMG/M
3300015371\|Ga0132258_11279321	Not Available	1854	Open in IMG/M
3300015374\|Ga0132255_104195592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300018027\|Ga0184605_10071442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1504	Open in IMG/M
3300018061\|Ga0184619_10009074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3856	Open in IMG/M
3300018072\|Ga0184635_10167692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877	Open in IMG/M
3300018073\|Ga0184624_10454894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300018468\|Ga0066662_10007364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5518	Open in IMG/M
3300019356\|Ga0173481_10025653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1840	Open in IMG/M
3300019356\|Ga0173481_10381713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300021445\|Ga0182009_10181826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
3300023261\|Ga0247796_1012909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1223	Open in IMG/M
3300024177\|Ga0247686_1006189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1233	Open in IMG/M
3300024181\|Ga0247693_1072936	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300024232\|Ga0247664_1169253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300024245\|Ga0247677_1011252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1251	Open in IMG/M
3300024310\|Ga0247681_1017271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1022	Open in IMG/M
3300025906\|Ga0207699_10303633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1115	Open in IMG/M
3300025910\|Ga0207684_10193669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1753	Open in IMG/M
3300025920\|Ga0207649_11394332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300025921\|Ga0207652_11485901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300025938\|Ga0207704_11425913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300025939\|Ga0207665_11255267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300025939\|Ga0207665_11604173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300025944\|Ga0207661_10159451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1956	Open in IMG/M
3300025945\|Ga0207679_10818801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300026078\|Ga0207702_10643728	Not Available	1042	Open in IMG/M
3300026116\|Ga0207674_10072303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3464	Open in IMG/M
3300026300\|Ga0209027_1002997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	6376	Open in IMG/M
3300027485\|Ga0207635_1012694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300027765\|Ga0209073_10400308	Not Available	563	Open in IMG/M
3300027882\|Ga0209590_10703516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300027907\|Ga0207428_10004473	All Organisms → cellular organisms → Bacteria	13256	Open in IMG/M
3300028138\|Ga0247684_1021016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300028587\|Ga0247828_10662334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300028722\|Ga0307319_10267885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300028784\|Ga0307282_10245510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300028796\|Ga0307287_10031146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1905	Open in IMG/M
3300031847\|Ga0310907_10853120	Not Available	513	Open in IMG/M
3300031995\|Ga0307409_100189022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1831	Open in IMG/M
3300031996\|Ga0308176_11088130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	845	Open in IMG/M
3300032002\|Ga0307416_100423856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1376	Open in IMG/M
3300032003\|Ga0310897_10221919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300032017\|Ga0310899_10096667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1185	Open in IMG/M
3300032126\|Ga0307415_100125712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1932	Open in IMG/M
3300032160\|Ga0311301_10050354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9563	Open in IMG/M
3300034817\|Ga0373948_0108887	Not Available	659	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.87%
Host-Associated	Host-Associated	27.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.77%
Plants	Host-Associated → Plants	27.13%
Aquatic	Environmental → Aquatic	3.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.18%
Sediment	Environmental → Aquatic → Sediment	3.10%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.94%
Loam	Environmental → Terrestrial → Soil → Loam	17.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.65%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.65%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	4.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.10%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027485	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A3w-11 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1014441011	3300000956	Soil	VSTAVKSFRELDDLVLHLKGLVLVQRVREEGGADEAELGMYRAEIDRVRDELAEYLRGAGR*
JGI24747J21853_10033531	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	RELDDLVLHLKGLVLVRKVQETRGAGHDELHMYGVEIERVRDRLAELVRAGAA*
JGI25404J52841_101414201	3300003659	Tabebuia Heterophylla Rhizosphere	MSAVMQNFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLATVVRESEQAA*
JGI25405J52794_100676211	3300003911	Tabebuia Heterophylla Rhizosphere	MSPALQGFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAAVVRESEQAA*
Ga0062593_1001043282	3300004114	Soil	VTAAAQGFRELDDLVLHLKGLVIVQGLREQSGADELELAQYGAEIERVRDELAAYVRAGR
Ga0062593_1004353812	3300004114	Soil	VSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0062593_1007022032	3300004114	Soil	VSAAAYALRELDDLVLHLKGLVLVRGVREERGADPDELAMYGAEIDRVREQLAAFVKEAEAAAAEAA*
Ga0062593_1013896222	3300004114	Soil	VSAAVYGFRELDDLVLHLKGLVLVRGVRAEGGADEEELAMYGAEIDRVRDRLAAFVQEAQAA*
Ga0062589_1011074592	3300004156	Soil	VSAAVYGFRELDDLVLHLKGLVLVRGVRAEGGADEEELAMYGDEIDRVRDRLAAFVQEAQAA*
Ga0062589_1020179671	3300004156	Soil	MMPEPTFRELDDLVLHLKGLVLVRGLREGRGADEHELHQYDAEIDRLRGRLADS
Ga0062595_1001662582	3300004479	Soil	MSAAVAQGFRELDDLVLHLKGLVLVRGVREQGGADADELEMYRAEIDRVRERLAAVVKETRAA*
Ga0062595_1019219622	3300004479	Soil	MTSFRELDDLVLHLKGLVLVRRLRERSGAEATELAMYGAEIERVRERLAELVQAEAAQAA
Ga0062591_1013610571	3300004643	Soil	VTAATQGFRELDDLVLHLKGLVIVQGLREQSGADELELAQYGAEIERVRDELAAYVRAGR
Ga0062594_1001557711	3300005093	Soil	GGGVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0066672_100348992	3300005167	Soil	MSFRELDDLVLHLKGLVLVRKLRERNGAEAGELAMYGAEIERVHESLARYGLPHP*
Ga0066677_103003842	3300005171	Soil	VTSFRELDDLVLHLKGLVLVRKLRERSGAEATELALYGAEIERVRERLAEVAKAKAA*
Ga0066671_102899852	3300005184	Soil	VKSFRELDDLVLHLKGLVLVRKLRERSGAEPTELAMYGAEIERVRERLAGFVDQARLA*
Ga0066671_106410341	3300005184	Soil	SFRELDDLVLHLKGLVLVRKLRERSGAEATELALYGAEIERVRERLAEVAKAKAA*
Ga0066388_1000947734	3300005332	Tropical Forest Soil	VSTAMAPSFRELDDLVLHLKGLVLVRGVRAERGADDDELAMYGAEIDRVRDRLASLVKRSQAA*
Ga0066388_1006877205	3300005332	Tropical Forest Soil	ELDDLVLHLKGLVLVQGVREQGGADDDELAMYGDEIARVREQLASYVRSAAR*
Ga0066388_1044925162	3300005332	Tropical Forest Soil	VSAAMQNFRELDDLVLHLKGLVLVRGVREQRGADADELAMYGAEIDRVRDRLAAVVRQSEQAA*
Ga0070680_1004315432	3300005336	Corn Rhizosphere	MNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIARVRDQLAEYVRDAGR*
Ga0070682_1000067371	3300005337	Corn Rhizosphere	FRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAGR*
Ga0068868_1024142291	3300005338	Miscanthus Rhizosphere	VSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVREAEQAA*
Ga0070671_1007684422	3300005355	Switchgrass Rhizosphere	VSTAVKSFRELDDLVLHLKGLVLVRRVREEGGADEDELGMYRAEIDRVRDELAAYLRGAGR*
Ga0070709_100760846	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIARVRDQLAEYVRDAGR*
Ga0070710_100523632	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRKQLAEYVRGAAR*
Ga0070705_1019289641	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VSFRELDELVLHLKGLVLVRKLRERDGAEEDELAMYRAEIERVREQLAAAAKLQAA*
Ga0070708_1000401561	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGAGAKSFRELDDLVLHLKGLVLVRSLRERRGAEEEELEMYGAEIDRVRDQLAELVRSDQRAAA*
Ga0066687_108382752	3300005454	Soil	MTSFRELDDLVLHLKGLVLVRKLRERNGAETTELAMYGAEIDRVRERLA
Ga0068853_1018508902	3300005539	Corn Rhizosphere	VSTAVKSFRELDDLVLHLKGLVLVRRVREEGGADEDELGMYRAEIDRVRDELA
Ga0070686_1001019243	3300005544	Switchgrass Rhizosphere	MNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDQELAQYGAEIERVRDQLAEYVRDAGR*
Ga0070704_1013753871	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ELDDLVLHLKGLVLVRKVQETRGAGQDELHMYGAEIERVRDRLAELVRAGA*
Ga0070664_1001341454	3300005564	Corn Rhizosphere	GSVTGEISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERVRNRLADVVKTSD*
Ga0070702_1009754692	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIEGVRDQLAEYVRDAGR*
Ga0066905_1000375515	3300005713	Tropical Forest Soil	MSPALQSFRELDDLVLHLKGLVLVRGVREERGADDDELAMYGAEIDRVRDRLAAVVRASEQAA*
Ga0066905_1002833333	3300005713	Tropical Forest Soil	MSFATQGFRDLDDLVLHLKGLVLVRGVREERGADADELAMYGEEIDRVRDRLADLVRATPQAA*
Ga0066903_1002964973	3300005764	Tropical Forest Soil	MSAAVQGFRELDDLVLHLKGLVLVQGVRERGGADADELDMYGAEIDRVRQQLAEYVRSAAR*
Ga0066903_1022836872	3300005764	Tropical Forest Soil	MSAAVRGFRELDDLVLHLKGLVLVQGVREQGGADALELEMYGAEIDRVRDQLAEYVRGAGR*
Ga0068870_103982492	3300005840	Miscanthus Rhizosphere	MNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAGR*
Ga0081455_100008368	3300005937	Tabebuia Heterophylla Rhizosphere	VSPALQGFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAAVVRESEQAA*
Ga0081455_108000071	3300005937	Tabebuia Heterophylla Rhizosphere	MTVIEYAFRELDDLVLHLKGLVLVHRMREQRGADDSELAMFRAEIDRVRDRLAHIVRAGEEVLA*
Ga0081540_100269121	3300005983	Tabebuia Heterophylla Rhizosphere	MSPALQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDQLAAVVRASEQAA*
Ga0081539_101436583	3300005985	Tabebuia Heterophylla Rhizosphere	MTPFRDLDDLVLHLKGLVLVQELRRDRGADESELMMYGAEIERVRSQLADFLKAAA*
Ga0066696_109036472	3300006032	Soil	MAAFRELDDLVLHLKGLVLVRKVRERNGADKGELEMYRAEIERVRERLADFV
Ga0075432_100141592	3300006058	Populus Rhizosphere	VSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGVEIDRVRDRLAALVRESEQAA*
Ga0079220_102408912	3300006806	Agricultural Soil	VSAAPQGFRELDDLVLHLKGLVLVQGVRERSGADDLELEMYGAEIDRVRAQLAEYVSGAGR*
Ga0079220_103805472	3300006806	Agricultural Soil	VSAAVESFRDLDDLVLHLKGLVLVRGVRERGGADASELAMYRDEIDRIREQLADFVRGAEG*
Ga0075425_1002604042	3300006854	Populus Rhizosphere	MQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGVEIDRVRDRLAALVRESEQAA*
Ga0075434_1005728471	3300006871	Populus Rhizosphere	AMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGVEIDRVRDRLAALVRESEQAA
Ga0075434_1018054151	3300006871	Populus Rhizosphere	VSADVQSFRELDDLVLHLKGLVLVRRLRERGGADDSELVMYGAEIDRVREQLAGLVARSAAA*
Ga0068865_1011378781	3300006881	Miscanthus Rhizosphere	VIGEISKFHELDDLVLHLKGLVLVRKVREARGAETDELDLYGAEIERVRNRLA
Ga0079219_109475141	3300006954	Agricultural Soil	VSAAPQGFRELDDLVLHLKGLVLVQGVRERSGADELELEMYGAEIDRVRAELAEYVRGA
Ga0066710_1006348392	3300009012	Grasslands Soil	MDHSFRQLDDLVLNLKGLVLVPDLRARDGAAPEELDMYRAEIDRVRDRLADLVRADEAQPAAA
Ga0066710_1016249401	3300009012	Grasslands Soil	MDHSFRELDDLVLHLKGLVLVRKLRERRGADAGELAMYGMEIDRVRERLASLVRTGQRQAAA
Ga0099827_106856092	3300009090	Vadose Zone Soil	MAHARGFRELDDLVLHLKGLVLVRRFRERQGADDGELLMYGDEIDRVREQLVNLVRFG*
Ga0111539_127673342	3300009094	Populus Rhizosphere	TAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0066709_1017755022	3300009137	Grasslands Soil	MDHSFRELDDLVLDLKGLVLVRKLRERRGADAGELAMYALEIDRVRERLANLVRTGQQQAAA*
Ga0114129_108392201	3300009147	Populus Rhizosphere	GRGERAFDRAGPGRIRGGGVSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0126313_100445872	3300009840	Serpentine Soil	VSPATQGFRELDDLVLHLKGLVLVRAVREERGADTDELAMYGAEIDRVRDRLAAVVRETEQAA*
Ga0126313_101651402	3300009840	Serpentine Soil	MHGFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIERVRDRLAAVVRETQQAA*
Ga0126315_101797391	3300010038	Serpentine Soil	ATQGFRELDDLVLHLKGLVLVRAVREERGADTDELAMYGAEIDRVRDRLAAVVRETEQAA
Ga0126308_101360212	3300010040	Serpentine Soil	VTVDISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERIRNRLAHVVKTSD
Ga0126312_100106363	3300010041	Serpentine Soil	VSPATQAFRELDDLVLHLKGLVLVRAVREERGADTDELAMYGAEIDRVRDRLAAVVRETEQAA*
Ga0126380_117219121	3300010043	Tropical Forest Soil	VTAVAAQGFRELDDLVLHLKGLVLVQGVRERGGADDDELAMYGVEIDRVREQLASYVRSAAR*
Ga0126311_101756672	3300010045	Serpentine Soil	VSPATQGFHELDDLVLHLKGLVLVRAVREERGADTDELAMYGAEIDRVRDRLAAVVRETEQAA*
Ga0134111_104875371	3300010329	Grasslands Soil	MEHSFRQLDDLVLNLRGLVLVRDLRERDGAATEELDMYGAEIDRVRDRLASFVRYGRAHQAA*
Ga0126376_110157952	3300010359	Tropical Forest Soil	VSPVAQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLATVVRESEQAA*
Ga0126376_131962122	3300010359	Tropical Forest Soil	VTAVAAQGFRELDDLVLHLKGLVLVQGVRERGGADDDELAMYGAEIARVREQLASYVRSAAR*
Ga0126372_103948972	3300010360	Tropical Forest Soil	VSTAVQGFRELDDLVLHLKGLVLVQGVREQGGADDDELAMYGDEIARVREQLASYVRSAAR*
Ga0126377_106920472	3300010362	Tropical Forest Soil	MSPALQSFRELDDLVLHLKGLVLVRGVREQRGADDDELAMYGAEIDRVRDRLAAVVRASEQAA*
Ga0126377_118222432	3300010362	Tropical Forest Soil	MSAAVQGFRELDDLVLHLKGLVLVQGVREQGGADELELEMYGAEINRVRDQLAEYVRGAGR*
Ga0105246_103075112	3300011119	Miscanthus Rhizosphere	MNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADELELAQYGAEIERVRDQQAEYVRDAGR*
Ga0137372_105075812	3300012350	Vadose Zone Soil	MDHSFRELDDLVLHLKGLVLVRKLRERRGADAGELAIYGMEIDRVRERLANLVKTGQQQAAA*
Ga0137372_108352172	3300012350	Vadose Zone Soil	MGQSFLELDDLVLQLKGLVLVSKVRERHGADTGELAMYSVEIDRVRDRLANLMRSVGLDQAVA*
Ga0137366_106680632	3300012354	Vadose Zone Soil	ELDDLVLHLKGLVLVRKLREQGGADEGELLMYGAEIDRLGGRLAELARASNEQVHGERAA
Ga0137371_102630404	3300012356	Vadose Zone Soil	MDHSFSELDDLVLHLKGLVLVRKYRERRGADAGELAMYSLEIDRVRELLANLVKTGQRQAA*
Ga0157316_10241732	3300012510	Arabidopsis Rhizosphere	MQSFRELDDLVLDLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0157296_100343434	3300012905	Soil	RELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA*
Ga0157298_100593952	3300012913	Soil	MQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLPALVRESEQAA*
Ga0164299_109215922	3300012958	Soil	MNAAVQGFRELDDLVLHLKGLVILQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAGR*
Ga0182008_109730172	3300014497	Rhizosphere	RELDDLVLHLKGLVLVRKLRERSGAEPTELAMYGAEIERVRERLAGFVDQARLA*
Ga0157376_100318182	3300014969	Miscanthus Rhizosphere	MNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVSDQLAEYVRDAGR*
Ga0132258_112793212	3300015371	Arabidopsis Rhizosphere	VSAAVVGPSFRELDDLVLHLKGLVLVRGVRAEGGADAAELAMYAAEIDRVRDRLASIVRSQAA*
Ga0132255_1041955922	3300015374	Arabidopsis Rhizosphere	VSAAVAVPSFRELDDLVLHLKGLVLVRGVRAEGGADADELAMYGAEIERVRDRLASIVRS
Ga0184605_100714422	3300018027	Groundwater Sediment	VIAETSGFRELDDLVLHLKGLVLVRKVREARGADVAELELYGVEIDRVRDRLAEFVKTSVQAAA
Ga0184619_100090742	3300018061	Groundwater Sediment	MAETSGFRELDDLVLHLKGLVLVRKVREARGADVAELELYGVEIDRVRDRLAEFVKTSVQAAA
Ga0184635_101676922	3300018072	Groundwater Sediment	MTAAVAQGFRELDDLVLHLKGLVLVRGVREQGGADADELEMYRAEIDRVRDRLASVVKETRAA
Ga0184624_104548941	3300018073	Groundwater Sediment	MGELSKFRELDDLVLHLKGLVLVRKVREARGADADELEMYGAEIDRVRNRLAEFVRAGAQTEYSRA
Ga0066662_100073644	3300018468	Grasslands Soil	MSFRELDDLVLHLKGLVLVRKLRERNGAEAGELAMYGAEIERVHESLARYGLPHP
Ga0173481_100256532	3300019356	Soil	VSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA
Ga0173481_103817132	3300019356	Soil	VSAAVYGFRELDDLVLHLKGLVLVRGVRAEGGADEEELAMYGAEIDRVRDRLAAFVQEAQAA
Ga0182009_101818262	3300021445	Soil	VSTAVKSFRELDDLVLHLKGLVLVQRVREEGGADEAELGMYRAEIDRVRDELAEYLRGAG
Ga0247796_10129092	3300023261	Soil	VSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVREQLAAFVKEAEAAAAEAA
Ga0247686_10061892	3300024177	Soil	MNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIARVRDQLAEYVRDAG
Ga0247693_10729361	3300024181	Soil	MSAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDRLAEYVRGAG
Ga0247664_11692532	3300024232	Soil	MTSFRELDDLVLHLKGLVLVRKLRERNGAETTELAMYGAEIDRVRERLAELVQGEAPQAA
Ga0247677_10112522	3300024245	Soil	VSTAVKSFRELDDLVLHLKGLVLVRRVREEGGADEDELGMYRAEIDRVRDELAAYLRGAG
Ga0247681_10172713	3300024310	Soil	KSFRELDDLVLHLKGLVLVRRVREEGGADEDELGMYRAEIDRVRDELAAYLRGAGR
Ga0207699_103036332	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTSFRELDDLVLHLKGLVLVRKLRERNGAETTELAMYGAEIDRVRERLAQVMQGEASQAA
Ga0207684_101936692	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGAGAKSFRELDDLVLHLKGLVLVRSLRERRGAEEEELEMYGAEIDRVRDQLAELVRSDQRAAA
Ga0207649_113943322	3300025920	Corn Rhizosphere	VTGEISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERVRNRLADVVKTSV
Ga0207652_114859012	3300025921	Corn Rhizosphere	GGMNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAGR
Ga0207704_114259131	3300025938	Miscanthus Rhizosphere	VIGEISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERVRNRLAEVVKTSN
Ga0207665_112552672	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VSFRELDDLVLHLKGLVLVRKLRARDGAEEDELAMYGAEIERVREQLAAVAKL
Ga0207665_116041732	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTSFRELDDLVLHLKGLVLVRKLRERNGAEDAELAMYGEEIERVRERLADLVKLQAA
Ga0207661_101594514	3300025944	Corn Rhizosphere	GNRPRGGSVTGEISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERVRNRLADVVKTSD
Ga0207679_108188011	3300025945	Corn Rhizosphere	MNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIDRVRDQLAEYVRDAG
Ga0207702_106437283	3300026078	Corn Rhizosphere	VSTAVKSFRELDDLVLHLKGLVLVQRVREEGGADEAELGMYRAEIDRVRDELAAYLRGAG
Ga0207674_100723034	3300026116	Corn Rhizosphere	VTGEISKFHELDDLVLHLKGLVLVRKVREARGAEADELDLYGAEIERVRNRLADVVKTSD
Ga0209027_10029976	3300026300	Grasslands Soil	VTSFRELDDLVLRLKGLVLVRKLRERGGAETTELAMYGEEIERVRERLAAAVK
Ga0207635_10126941	3300027485	Soil	VSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRL
Ga0209073_104003082	3300027765	Agricultural Soil	VSAAVESFRDLDDLVLHLKGLVLVQGVRERSGADELELEMYGAEIDRVRAELAEYVRGAG
Ga0209590_107035162	3300027882	Vadose Zone Soil	MAHARGFRELDDLVLHLKGLVLVRRFRERQGADDGELLMYGDEIDRVREQLVNLVRFG
Ga0207428_1000447314	3300027907	Populus Rhizosphere	VSTAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGVEIDRVRDRLAALVRESEQAA
Ga0247684_10210162	3300028138	Soil	MNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRKQLAEYVRGAA
Ga0247828_106623342	3300028587	Soil	MSPAMQSFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRESEQAA
Ga0307319_102678852	3300028722	Soil	MGELSKFRELDDLVLHLKGLVLVRKVREARGADADELEMYGAEIDRVRNRLAEFVR
Ga0307282_102455102	3300028784	Soil	MAETSGFRELDDLVLHLKGLVLVCKVREARGADVAELELYGVEIDRVRDRLAEFVKTSVQAAA
Ga0307287_100311462	3300028796	Soil	MGELSKFRELDDLVLHLKGLVLVRKVREARGADADELQMYGAEIDRVRNRLAEFVRAGAQTEYSRA
Ga0310907_108531202	3300031847	Soil	MSAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAG
Ga0307409_1001890222	3300031995	Rhizosphere	VSPATQGFGFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRETEQAA
Ga0308176_110881302	3300031996	Soil	AEGGGVTAAGYGFRELDDLVLHLKGLVLVRGVREQGGADEEELAMYGAEIDRVRDRLAAFVREAEAA
Ga0307416_1004238562	3300032002	Rhizosphere	VSPATQGFRELDDLVLHLKGLVLVRGVREERGADADELAMYGAEIDRVRDRLAALVRETEQAA
Ga0310897_102219192	3300032003	Soil	MNAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYARDAG
Ga0310899_100966672	3300032017	Soil	MTAAVQGYRELDDLVLHLKGLVIVQGLREQSGADDLELAQYGAEIERVRDQLAEYVRDAG
Ga0307415_1001257121	3300032126	Rhizosphere	VSPATQGFRELDDLVLHLKGLVLVRAVREERGADTDELAMYGAEIDRVRDRL
Ga0311301_100503547	3300032160	Peatlands Soil	MDRPFRELDDLVLHLKGLVLVRSLRERKGADRNELDMYGAEIERTRDRLASFLRRDHELSAA
Ga0373948_0108887_155_340	3300034817	Rhizosphere Soil	MSAAVQGFRELDDLVLHLKGLVIVQGLREQSGADDLELGQYGAEIERVRDQLAEYVRDAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063460

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences