Metagenome / Metatranscriptome Family F063410

Basic Information
Family ID	F063410
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	126 residues
Representative Sequence	PQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Number of Associated Samples	112
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (12.403 % of family members)
Environment Ontology (ENVO)	Unclassified (50.388 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.566 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.30% β-sheet: 0.00% Coil/Unstructured: 18.70%
Feature Viewer

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Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF03605	DcuA_DcuB	86.05
PF13520	AA_permease_2	4.65
PF04043	PMEI	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2704	Anaerobic C4-dicarboxylate transporter	Carbohydrate transport and metabolism [G]	86.05

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.49%
Environmental	Environmental	45.74%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.49%
Terrestrial	Environmental → Terrestrial	44.96%
Aquatic	Environmental → Aquatic	0.78%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.16%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.55%
Marine	Environmental → Aquatic → Marine	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.40%
Loam	Environmental → Terrestrial → Soil → Loam	10.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	16.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	12.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.33%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.55%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.55%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300022903	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L001-104B-6	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023097	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4	Environmental	Open in IMG/M
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026807	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-11 (SPAdes)	Environmental	Open in IMG/M
3300026905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-10 (SPAdes)	Environmental	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02983230	2088090015	Soil	QSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
4PV_00920780	2170459015	Switchgrass, Maize And Mischanthus Litter	MITGIDNAGVPDTPQGEQSANAISDWADATRDDLEDAEDSLDNEADTLAEAISQLTDAARAIAGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
JGI10216J12902_1016117062	3300000956	Soil	WRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
JGI24747J21853_10263882	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	PDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
JGI24737J22298_102732701	3300001990	Corn Rhizosphere	VAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
JGI24744J21845_100112692	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	SIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0055467_100020941	3300003996	Natural And Restored Wetlands	TIVDELRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATQTMITGIDNAGVPDTAQGEQSANAVSGWADATRNDLEDAQDSLDTEADTLADAVAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0062590_1011906881	3300004157	Soil	TDTMITGIDNAGVPDTPQGEQSANAISDWADATRDDLEDAEDSLDNEADTLAEAIAQLTDAARAIAGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0063356_1022915982	3300004463	Arabidopsis Thaliana Rhizosphere	SATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0062595_1006722482	3300004479	Soil	GSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0070658_102159851	3300005327	Corn Rhizosphere	VAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLEQTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS*
Ga0070676_102716541	3300005328	Miscanthus Rhizosphere	RQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0070683_1016243742	3300005329	Corn Rhizosphere	PQGRPAFIRDGLEQTIEATETMITGVANAGVPDTAQGAQSAKAISDWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS*
Ga0070670_1019809201	3300005331	Switchgrass Rhizosphere	RGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATVDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPQLAAALRDSSTCRQLREETTS*
Ga0070670_1020172951	3300005331	Switchgrass Rhizosphere	GQIESIVDGIRDPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIGNAGVPDTAQGAQSANAISAWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0070666_101146332	3300005335	Switchgrass Rhizosphere	VAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIANAGVPDTAQGAQSANAISGWADGTLDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0070660_1001279921	3300005339	Corn Rhizosphere	GEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0070660_1001306343	3300005339	Corn Rhizosphere	LGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0070689_1007606991	3300005340	Switchgrass Rhizosphere	QGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARALTGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0070692_102888952	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	IVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLENAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0070675_1001081213	3300005354	Miscanthus Rhizosphere	ATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0070675_1022623801	3300005354	Miscanthus Rhizosphere	RDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0070674_1011961582	3300005356	Miscanthus Rhizosphere	NAGVPDTAQGAQSANAISGWADGTLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVEAVADVGRTDPELAAALRDSSTCRQLRKETTS*
Ga0070688_1005174111	3300005365	Switchgrass Rhizosphere	SETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATVDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPQLAAALRDSSTCRQLREETTS*
Ga0070688_1006934622	3300005365	Switchgrass Rhizosphere	VENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0070694_1002243391	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	PDASGSLGVEEPQSETPQGRTTFIRVGLEQTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0070708_1002120461	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQGAQSAKAISGWADTTVNDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVEAVADVGRTDPELAAALRDSSTCRQLREETTS*
Ga0070663_1018942651	3300005455	Corn Rhizosphere	VAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGTQSANAISDWADATLDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPQLAAALRDSSTCRQLREETTS*
Ga0070662_1001944072	3300005457	Corn Rhizosphere	RTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0068853_1012425521	3300005539	Corn Rhizosphere	PQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0070686_1013686161	3300005544	Switchgrass Rhizosphere	VWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLENAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0070695_1007337532	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	QSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0070665_1020304831	3300005548	Switchgrass Rhizosphere	NAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0068855_1018131161	3300005563	Corn Rhizosphere	ATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0070664_1005568821	3300005564	Corn Rhizosphere	VAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQGAQSAKAISGWADTTVNDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0070664_1022856202	3300005564	Corn Rhizosphere	QSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLENAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0068856_1022816872	3300005614	Corn Rhizosphere	FIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATVDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPQLAAALRDSSTCRQLREETTS*
Ga0068861_1012964371	3300005719	Switchgrass Rhizosphere	VDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLENAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0068851_101927031	3300005834	Corn Rhizosphere	EIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLENAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0068870_110822711	3300005840	Miscanthus Rhizosphere	PQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS*
Ga0068870_113924832	3300005840	Miscanthus Rhizosphere	RDGLEQTIEATETMITAIDNAGVPDTAQGAQSAKAISGWADTTVNDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0068858_1021898732	3300005842	Switchgrass Rhizosphere	RDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0068860_1007512311	3300005843	Switchgrass Rhizosphere	IVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0075419_105693811	3300006969	Populus Rhizosphere	QTIEATETMITAIDNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0105245_126264052	3300009098	Miscanthus Rhizosphere	RDPDASGSLGVEEPQSETPQGRTTFIRDGLEQTVEATETMITGIGNAGVPDTAQGTQSANAISDWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS*
Ga0111538_136554092	3300009156	Populus Rhizosphere	LTVEATETMITGIGNAGVPDTAQGAQSANAISAWADATLDDLEDAQDSLDNEADTLAEAISQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETSS*
Ga0075423_108852912	3300009162	Populus Rhizosphere	GQIESIVDGIRDPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQGAQSAKAISGWADTTVNDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS*
Ga0105241_105704402	3300009174	Corn Rhizosphere	QSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0105237_120716141	3300009545	Corn Rhizosphere	QSETPQGRPAFIRDGLEQTIEATETMITGIANAGVPDTAQGAESANAISGWADATRDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVEAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0105238_106263371	3300009551	Corn Rhizosphere	THTMITGVENAGVPDTPQGEQSANAISGWADATRNDLENAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0105238_107525911	3300009551	Corn Rhizosphere	GQIESIVDGIRDPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIANAGVPDTAQGAQSANAISGWADGTLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVEAVADVGRTDPELAAALRDSSTCRQLRKETTS*
Ga0105249_105194612	3300009553	Switchgrass Rhizosphere	VWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0134127_101410041	3300010399	Terrestrial Soil	RATHTMITGVENAGVPDTAQGEQSANAISGWADATRNDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0134127_124494231	3300010399	Terrestrial Soil	VAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQGAQSAKAISGWADTTVNDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVEAVADVGRTDPELAAALRDSSTCRQLRKETTS*
Ga0134121_115392972	3300010401	Terrestrial Soil	VAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSAKAISGWADTTVNDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS*
Ga0157304_10357432	3300012882	Soil	GFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0157285_100160502	3300012897	Soil	IVDELRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0157285_100305781	3300012897	Soil	KQSANAISDWADATRDDLEDAEDSLDNEADTLAEAIAQLTDAARAIAGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0157291_100243282	3300012902	Soil	MITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAVTGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0157286_100909612	3300012908	Soil	MITGVENAGVPDSSQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0157286_101933131	3300012908	Soil	IVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSAKAISGWADTTVNDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0157301_100886311	3300012911	Soil	ANAISGWADATRNDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0157297_100750311	3300012914	Soil	GQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGVANAGVPDTAQGAQSAKAISDWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS*
Ga0157370_120463941	3300013104	Corn Rhizosphere	MITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0157369_118546281	3300013105	Corn Rhizosphere	NAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0157374_104260102	3300013296	Miscanthus Rhizosphere	ITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS*
Ga0163162_123473652	3300013306	Switchgrass Rhizosphere	RQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS*
Ga0157380_117937071	3300014326	Switchgrass Rhizosphere	NAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS*
Ga0157379_115494231	3300014968	Switchgrass Rhizosphere	RNPDASGSLGVEEPQSETPQGRTTFIRAGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATVDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS*
Ga0173481_101090051	3300019356	Soil	VAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGVANAGVPDTAQGAQSAKAISDWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS
Ga0173482_100554472	3300019361	Soil	GEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0206353_109174991	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	PQGRPAFIRDGLEQTIEATETMITGIANAGVPDTAQGAQSANAISGWADGTLDDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0247786_10061381	3300022883	Soil	GVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAVTGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0247786_10628142	3300022883	Soil	IRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0247785_10048582	3300022889	Soil	LERTVRATHTMITGVENAGVPDTSQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAVTGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0247753_10422252	3300022892	Soil	FVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0247787_10583651	3300022893	Soil	RTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0247745_10315281	3300022898	Soil	SVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0247788_10031273	3300022901	Soil	SATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0247788_10442652	3300022901	Soil	QGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIANAGVPDTAQGAESANAISGWADATRDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVEAVADVGRTDPELAAALRDSSTCRQLRKETTS
Ga0247774_11071091	3300022903	Plant Litter	NAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0247797_10292391	3300023057	Soil	LERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0247801_10554252	3300023064	Soil	QGRPAFIRDGLEQTIEATETMITGVANAGVPDTAQGAQSAKAISDWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0247743_10529641	3300023067	Soil	VCGSVAVWRGEIESIVDELRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAVTGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0247799_10060541	3300023072	Soil	MITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAVTGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0247757_100730352	3300023097	Plant Litter	HTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0247798_10578602	3300023260	Soil	QGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0247789_10181051	3300023266	Soil	QPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0247794_100154831	3300024055	Soil	PDTPQGEQSANAISDWADATRDDLEDAEDSLDNEADTLAEAIAQLTDAARAIAGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0247794_101343681	3300024055	Soil	NAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDDEADTLGDAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0207680_102178861	3300025903	Switchgrass Rhizosphere	ETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVEAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0207647_102582652	3300025904	Corn Rhizosphere	QPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPGTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207645_102505592	3300025907	Miscanthus Rhizosphere	VRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207645_108496182	3300025907	Miscanthus Rhizosphere	SRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETT
Ga0207643_110628511	3300025908	Miscanthus Rhizosphere	RDGLEQTIEATETMITAIDNAGVPDTAQGAQSAKAISGWADTTVNDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0207660_102418572	3300025917	Corn Rhizosphere	TPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0207662_104095883	3300025918	Switchgrass Rhizosphere	THTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207659_113003432	3300025926	Miscanthus Rhizosphere	RDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0207706_100714391	3300025933	Corn Rhizosphere	TGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207706_102760031	3300025933	Corn Rhizosphere	TGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0207670_111826132	3300025936	Switchgrass Rhizosphere	QGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARALTGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207669_115055552	3300025937	Miscanthus Rhizosphere	GQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS
Ga0207704_105437862	3300025938	Miscanthus Rhizosphere	GRPAFIRDGLEQTIEATETMITGIANAGVPDTAQGAQSANAISGWADGTLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVEAVADVGRTDPELAAALRDSSTCRQLRKETT
Ga0207711_118999311	3300025941	Switchgrass Rhizosphere	AGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS
Ga0207689_101257511	3300025942	Miscanthus Rhizosphere	GFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207661_114253661	3300025944	Corn Rhizosphere	ETPQGRPAFIRDGLEQTIEATETMITGVANAGVPDTAQGAQSAKAISDWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS
Ga0207667_102857492	3300025949	Corn Rhizosphere	MITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLGNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS
Ga0207651_100947103	3300025960	Switchgrass Rhizosphere	TANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207712_103810252	3300025961	Switchgrass Rhizosphere	FPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207668_110124172	3300025972	Switchgrass Rhizosphere	NPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGVANAGVPDTAQGAQSAKAISDWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0207640_104774661	3300025981	Corn Rhizosphere	ESIVDELRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0207658_111034031	3300025986	Switchgrass Rhizosphere	DGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATVDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS
Ga0207703_106611201	3300026035	Switchgrass Rhizosphere	ATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207703_114216302	3300026035	Switchgrass Rhizosphere	GQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0207708_109499221	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	TETMITGIANAGVPDTAQGAQSANAISGWADGTLDDLEDAQDSLDNEADTLAEAIAQLTDAARAITGAVTSGVEAVADVGRTDPELAAALRDSSTCRQLRKETTS
Ga0207702_105021282	3300026078	Corn Rhizosphere	ELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATVDDLEDAQDSLDNEADTLAEAVAQLTDAARAITGAVTSGVKAVADVGRTDPQLAAALRDSSTCRQLREETTS
Ga0207675_1011404881	3300026118	Switchgrass Rhizosphere	SVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLENAQDSLDEEADTLADAIAQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQELREETTS
Ga0207683_101670753	3300026121	Miscanthus Rhizosphere	TTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0207547_1060791	3300026807	Soil	VENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207516_10140341	3300026905	Soil	ENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0207538_10084212	3300027122	Soil	QGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0268264_109934782	3300028381	Switchgrass Rhizosphere	SIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAARAITGAVTGGVKAVADVARTDPELAAALRDSSTCQQLREETTS
Ga0247828_101600642	3300028587	Soil	SETPQGRPAFIRDGLEQTIEATETMITGIGNAGVPDTAQGAQSANAISAWADATLDDLEDAQDSLDNEADTLAEAISQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETSS
Ga0247826_104025401	3300030336	Soil	STPSEPQSETPQGRPAFIRDGLEQTIEATETMITGIGNAGVPDTAQGAQSANAISAWADATLDDLEDAQDSLDNEADTLAEAISQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETSS
Ga0247826_113151451	3300030336	Soil	SGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0310889_106344602	3300032179	Soil	TFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0310810_102133851	3300033412	Soil	PQGRTGFIRTGLERVVRATDTMITGIDNAGVPDTPQGEQSANAISDWADATRDDLEDAEDSLDNEADTLAEAISQLTDAARAIAGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS
Ga0373948_0124529_3_263	3300034817	Rhizosphere Soil	AQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCRQLREETTS
Ga0373958_0047940_582_890	3300034819	Rhizosphere Soil	MITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAITGAVTSGVKAVADVGRTDPELAAALRDSSTCQQLREETTS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063410

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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