Metagenome / Metatranscriptome Family F062953

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062953
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	59 residues
Representative Sequence	HYPMFRHRSATPAGVTGNGEVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGSGQPR
Number of Associated Samples	104
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.69 %
% of genes near scaffold ends (potentially truncated)	76.92 %
% of genes from short scaffolds (< 2000 bps)	87.69 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.846 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.462 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.46% β-sheet: 0.00% Coil/Unstructured: 68.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF13655	RVT_N	11.54
PF00072	Response_reg	1.54
PF08867	FRG	1.54
PF00578	AhpC-TSA	0.77
PF03992	ABM	0.77
PF13358	DDE_3	0.77
PF07596	SBP_bac_10	0.77
PF07691	PA14	0.77
PF13424	TPR_12	0.77
PF00884	Sulfatase	0.77
PF13701	DDE_Tnp_1_4	0.77
PF08535	KorB	0.77
PF13175	AAA_15	0.77
PF01695	IstB_IS21	0.77
PF16640	Big_3_5	0.77
PF00672	HAMP	0.77
PF00535	Glycos_transf_2	0.77
PF13545	HTH_Crp_2	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2165	Type II secretory pathway, pseudopilin PulG	Cell motility [N]	1.54
COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	Cell cycle control, cell division, chromosome partitioning [D]	0.77
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.85 %
Unclassified	root	N/A	26.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.85 %
Unclassified	root	N/A	26.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.85 %
Unclassified	root	N/A	26.15 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	63.08 %
Unclassified	root	N/A	26.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.54 %

Name	Rank	Taxonomy	Distribution
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	63.08 %
Unclassified	root	N/A	26.15 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	62.31 %
Unclassified	root	N/A	26.15 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	56.92 %
Unclassified	root	N/A	26.15 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	56.92 %
Unclassified	root	N/A	26.15 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	55.38 %
Unclassified	root	N/A	26.15 %
Paludisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera	0.77 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	0.77 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Singulisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera	55.38 %
Unclassified	root	N/A	26.15 %
unclassified Aquisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera	0.77 %
Paludisphaera borealis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	0.77 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Singulisphaera sp. GP187	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	54.62 %
Unclassified	root	N/A	26.15 %
Aquisphaera sp. JC669	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	0.77 %
Singulisphaera sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp.	0.77 %
Paludisphaera borealis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	0.77 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02HJKY7	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	504	Open in IMG/M
2170459006\|GBPF9FW02IN60Q	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	563	Open in IMG/M
3300000567\|JGI12270J11330_10178566	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M
3300000567\|JGI12270J11330_10252794	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	567	Open in IMG/M
3300000699\|JGI12536J11923_101546	Not Available	818	Open in IMG/M
3300002867\|Ga0006816J43186_102015	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300003218\|JGI26339J46600_10075359	Not Available	858	Open in IMG/M
3300003368\|JGI26340J50214_10101780	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	737	Open in IMG/M
3300004091\|Ga0062387_101627413	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	522	Open in IMG/M
3300004473\|Ga0068919_1072703	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	734	Open in IMG/M
3300004477\|Ga0068971_1578541	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	520	Open in IMG/M
3300004598\|Ga0068975_1044498	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1070	Open in IMG/M
3300004599\|Ga0068933_1268983	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300004604\|Ga0068943_1030422	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	607	Open in IMG/M
3300004605\|Ga0068952_1057208	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	772	Open in IMG/M
3300004631\|Ga0058899_12102131	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	853	Open in IMG/M
3300004799\|Ga0058863_11942724	Not Available	1062	Open in IMG/M
3300004801\|Ga0058860_12008036	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	627	Open in IMG/M
3300005332\|Ga0066388_103632396	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	787	Open in IMG/M
3300005458\|Ga0070681_11385085	Not Available	627	Open in IMG/M
3300005536\|Ga0070697_101104421	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	706	Open in IMG/M
3300005569\|Ga0066705_10501291	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	760	Open in IMG/M
3300005602\|Ga0070762_11310186	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	503	Open in IMG/M
3300005713\|Ga0066905_100771520	Not Available	831	Open in IMG/M
3300005713\|Ga0066905_101639857	Not Available	589	Open in IMG/M
3300005764\|Ga0066903_105357847	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	677	Open in IMG/M
3300005764\|Ga0066903_106732589	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	597	Open in IMG/M
3300006050\|Ga0075028_100329649	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	858	Open in IMG/M
3300006059\|Ga0075017_100940816	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	671	Open in IMG/M
3300006059\|Ga0075017_101218870	Not Available	589	Open in IMG/M
3300006059\|Ga0075017_101356998	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	558	Open in IMG/M
3300006102\|Ga0075015_100314074	Not Available	865	Open in IMG/M
3300006102\|Ga0075015_100354548	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	818	Open in IMG/M
3300006102\|Ga0075015_100376547	Not Available	796	Open in IMG/M
3300006175\|Ga0070712_101308163	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	632	Open in IMG/M
3300006579\|Ga0074054_12036945	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	565	Open in IMG/M
3300006804\|Ga0079221_11387717	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	558	Open in IMG/M
3300009147\|Ga0114129_13023653	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	552	Open in IMG/M
3300009520\|Ga0116214_1274640	Not Available	643	Open in IMG/M
3300009521\|Ga0116222_1020353	All Organisms → cellular organisms → Bacteria	3011	Open in IMG/M
3300009524\|Ga0116225_1146119	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	1080	Open in IMG/M
3300009700\|Ga0116217_10579579	Not Available	700	Open in IMG/M
3300009824\|Ga0116219_10401962	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	764	Open in IMG/M
3300009824\|Ga0116219_10797262	Not Available	515	Open in IMG/M
3300009839\|Ga0116223_10702561	Not Available	580	Open in IMG/M
3300010154\|Ga0127503_10428154	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	587	Open in IMG/M
3300010164\|Ga0063827_185866	Not Available	2681	Open in IMG/M
3300010339\|Ga0074046_10053068	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2687	Open in IMG/M
3300010339\|Ga0074046_10696293	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	597	Open in IMG/M
3300010339\|Ga0074046_10729740	Not Available	581	Open in IMG/M
3300010339\|Ga0074046_10911282	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	510	Open in IMG/M
3300010371\|Ga0134125_10914170	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	964	Open in IMG/M
3300010379\|Ga0136449_100078673	All Organisms → cellular organisms → Bacteria	6976	Open in IMG/M
3300010379\|Ga0136449_100876407	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1468	Open in IMG/M
3300010379\|Ga0136449_100999463	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	1347	Open in IMG/M
3300010379\|Ga0136449_101310064	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	1128	Open in IMG/M
3300010379\|Ga0136449_101969108	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	865	Open in IMG/M
3300010379\|Ga0136449_101971864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	864	Open in IMG/M
3300010379\|Ga0136449_102183771	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300010379\|Ga0136449_104548107	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	509	Open in IMG/M
3300010861\|Ga0126349_1258100	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	532	Open in IMG/M
3300011015\|Ga0138535_100200	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	639	Open in IMG/M
3300011054\|Ga0138523_1050361	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	555	Open in IMG/M
3300011087\|Ga0138570_1099517	Not Available	844	Open in IMG/M
3300011107\|Ga0151490_1634282	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	505	Open in IMG/M
3300012212\|Ga0150985_102451524	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	529	Open in IMG/M
3300012212\|Ga0150985_110120515	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	576	Open in IMG/M
3300012362\|Ga0137361_11745392	Not Available	541	Open in IMG/M
3300012685\|Ga0137397_11074364	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	588	Open in IMG/M
3300012922\|Ga0137394_11416532	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	555	Open in IMG/M
3300012986\|Ga0164304_11526098	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	554	Open in IMG/M
3300014158\|Ga0181521_10020689	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	5499	Open in IMG/M
3300014162\|Ga0181538_10509522	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	633	Open in IMG/M
3300014501\|Ga0182024_10377895	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1841	Open in IMG/M
3300014501\|Ga0182024_11591909	Not Available	741	Open in IMG/M
3300014501\|Ga0182024_12885450	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	509	Open in IMG/M
3300015356\|Ga0134073_10274328	Not Available	592	Open in IMG/M
3300015373\|Ga0132257_102472464	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	674	Open in IMG/M
3300016422\|Ga0182039_11000092	Not Available	750	Open in IMG/M
3300016750\|Ga0181505_10426947	Not Available	567	Open in IMG/M
3300017823\|Ga0187818_10053494	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	1736	Open in IMG/M
3300017943\|Ga0187819_10103912	Not Available	1697	Open in IMG/M
3300017966\|Ga0187776_11458557	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	524	Open in IMG/M
3300017970\|Ga0187783_10016627	All Organisms → cellular organisms → Bacteria	5431	Open in IMG/M
3300018033\|Ga0187867_10024470	All Organisms → cellular organisms → Bacteria	3841	Open in IMG/M
3300018064\|Ga0187773_10895432	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	573	Open in IMG/M
3300018086\|Ga0187769_10097572	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300018086\|Ga0187769_10676990	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	780	Open in IMG/M
3300018468\|Ga0066662_10795421	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300019245\|Ga0187791_1491093	Not Available	672	Open in IMG/M
3300019265\|Ga0187792_1452330	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	771	Open in IMG/M
3300020581\|Ga0210399_11078583	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	644	Open in IMG/M
3300021168\|Ga0210406_11354267	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	510	Open in IMG/M
3300021406\|Ga0210386_10127636	Not Available	2109	Open in IMG/M
3300025453\|Ga0208455_1006184	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp.	3145	Open in IMG/M
3300027497\|Ga0208199_1109459	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	568	Open in IMG/M
3300027568\|Ga0208042_1006711	Not Available	3173	Open in IMG/M
3300027570\|Ga0208043_1017993	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → unclassified Aquisphaera → Aquisphaera sp. JC669	2270	Open in IMG/M
3300027587\|Ga0209220_1136229	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	638	Open in IMG/M
3300027662\|Ga0208565_1181376	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	605	Open in IMG/M
3300027701\|Ga0209447_10028296	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300027824\|Ga0209040_10042472	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	2794	Open in IMG/M
3300027825\|Ga0209039_10368587	Not Available	554	Open in IMG/M
3300027902\|Ga0209048_10099261	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	2245	Open in IMG/M
3300029943\|Ga0311340_11583501	Not Available	510	Open in IMG/M
3300030659\|Ga0316363_10115288	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	1180	Open in IMG/M
3300030706\|Ga0310039_10041878	Not Available	2064	Open in IMG/M
3300030706\|Ga0310039_10394274	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	510	Open in IMG/M
3300030707\|Ga0310038_10461693	Not Available	542	Open in IMG/M
3300030975\|Ga0099845_1572266	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	677	Open in IMG/M
3300031236\|Ga0302324_103324100	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	526	Open in IMG/M
3300031446\|Ga0170820_14531329	Not Available	548	Open in IMG/M
3300031708\|Ga0310686_109456609	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	554	Open in IMG/M
3300031708\|Ga0310686_111173058	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	987	Open in IMG/M
3300031763\|Ga0318537_10058188	Not Available	1409	Open in IMG/M
3300031782\|Ga0318552_10617343	Not Available	553	Open in IMG/M
3300031792\|Ga0318529_10370795	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	666	Open in IMG/M
3300031798\|Ga0318523_10452868	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	636	Open in IMG/M
3300031821\|Ga0318567_10626602	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	611	Open in IMG/M
3300031860\|Ga0318495_10476668	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	546	Open in IMG/M
3300031879\|Ga0306919_11157220	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	589	Open in IMG/M
3300031946\|Ga0310910_11192601	Not Available	591	Open in IMG/M
3300032076\|Ga0306924_12207726	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	561	Open in IMG/M
3300032160\|Ga0311301_10171863	All Organisms → cellular organisms → Bacteria	3824	Open in IMG/M
3300032160\|Ga0311301_11130436	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300032160\|Ga0311301_12257309	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	621	Open in IMG/M
3300032261\|Ga0306920_102041226	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	802	Open in IMG/M
3300032896\|Ga0335075_10796364	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	887	Open in IMG/M
3300032898\|Ga0335072_11579716	Not Available	555	Open in IMG/M
3300033290\|Ga0318519_10816122	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.38%
Host-Associated	Host-Associated	4.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.46%
Aquatic	Environmental → Aquatic	16.92%
Plants	Host-Associated → Plants	3.08%
Human	Host-Associated → Human	1.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.92%
Freshwater	Environmental → Aquatic → Freshwater	11.54%
Sediment	Environmental → Aquatic → Sediment	5.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.31%
Peat	Environmental → Terrestrial → Peat	1.54%
Digestive System	Host-Associated → Human → Digestive System	1.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.00%
Loam	Environmental → Terrestrial → Soil → Loam	9.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.54%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.54%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.08%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.54%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.54%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.77%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	30.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.46%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.62%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.08%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.54%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.54%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.54%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.54%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.54%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.54%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.54%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.77%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000699	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79	Environmental	Open in IMG/M
3300002867	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 17 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004473	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004477	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004598	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 72 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004599	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 21 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004604	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 31 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004605	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 40 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010164	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 61 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011015	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 13 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011054	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 1 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011087	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 55 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019245	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030975	Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_00293960	2170459005	Grass Soil	MFRHRSATPAGVTGNGEVRSLGDNVSSILGSVVNARADTATASITAVGGQQSGTGQPRYSADK
L01_04817220	2170459006	Grass Soil	MFRHRSAAPAGVTGNGEVRSPGDNVTSIERSAVNARAKTATASIAAVGGQPSGTG
JGI12270J11330_101785663	3300000567	Peatlands Soil	MFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARANTATASITAVGGQQSGTGQSK*
JGI12270J11330_102527941	3300000567	Peatlands Soil	HYPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR*
JGI12536J11923_1015461	3300000699	Tropical Forest Soil	TPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR*
Ga0006816J43186_1020151	3300002867	Peatlands Soil	MVFRHYPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR*
JGI26339J46600_100753591	3300003218	Bog Forest Soil	HRSATPAGVAGNGEVRSLGNNVTSIYGSVVKARVDTTTASTKAVGGQQSGVRSTQVKY*
JGI26340J50214_101017801	3300003368	Bog Forest Soil	MVFRYYPMFRHWSATPAGVTGNGDVRSLGDNVTSILGSAVNARAXTATASITXVGGQQSGTGQXRCSADKGREQKQA*
Ga0062387_1016274132	3300004091	Bog Forest Soil	MFHHRSATPAGVAGNGEVRSLGNNVTSIYGSVVKARADTTTASTKAVGGQQSGVRSTQVKC*
Ga0068919_10727031	3300004473	Peatlands Soil	MFRHRSATPAGVAGNGEVRSLGNNVTSIYGSVVKARADTTTASITAVEGQQSGARSTQVKC*
Ga0068971_15785411	3300004477	Peatlands Soil	MFRHRSATPTGVAGNGEVRSLGNNVTSIYGSVVKARADTTTASTKAVGGQQSGVRSTQVKC*
Ga0068975_10444981	3300004598	Peatlands Soil	MVFRHYPMFRHRSATPAGVPGNGDVRSLGDNVTSILGPAVNARADTATASITAVGGQQSGTGQPR*
Ga0068933_12689831	3300004599	Peatlands Soil	MVFRHYPMFRHWSATPAGVTGNGNVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR
Ga0068943_10304221	3300004604	Peatlands Soil	RHYPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR*
Ga0068952_10572082	3300004605	Peatlands Soil	MFHHWSATPAGVAGNGEVRSLGNNVTSIYGSVVKARADTTTASITAVEGQQSGARSTQVKC*
Ga0058899_121021311	3300004631	Forest Soil	KEVFRHYPMFRHRSATPAGVTGNGEVRSLGDNVTSIFGSIVNARADTATASITAVGDQQSGAWSTQVKCC*
Ga0058863_119427242	3300004799	Host-Associated	MFRHRSATPAGVTSNGEVRSLGDNVTSISRSVVNARAETATASITAVGGQQFGDRSTQVKC*
Ga0058860_120080361	3300004801	Host-Associated	RHYPMFRHRSATPAGVAGNGEVRSLGDNVTSIERSVVEVRADTTTASITAVGGQQSGSGQLR*
Ga0066388_1036323962	3300005332	Tropical Forest Soil	MFRHRSATPAGVTGNGGVRSLGDNVTSILGSAVGARADTATASITAVGGQPS
Ga0070681_113850852	3300005458	Corn Rhizosphere	MFRHRSATPTGVTGNGEVPSLGDNASSILGSAVDARADTATASITAVGGQQSGEWSIHLKCR*
Ga0070697_1011044212	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRIAQEGFRHYPMFRHRSATPAGVAGNGEVRSLGDNEASILGSAVGARADTATASITAVGS*
Ga0066705_105012911	3300005569	Soil	MFRHRSATPAGVTGNGEVRSLGDNVTSILGSAVNARADTATASITAVGG
Ga0070762_113101862	3300005602	Soil	MRIAQEGFRHYPMFRHRSATPAGVAGNGEVRSLGDNVASILGSAGNARADLATASITAVG
Ga0066905_1007715201	3300005713	Tropical Forest Soil	SATPAGVTGNGEVRSLGDNVTSILGSAVNARAKTATASITAVGGQPSGTGQPR*
Ga0066905_1016398571	3300005713	Tropical Forest Soil	SATPAGVTGNGEVRSLGDNVTSILGSAVNARAKTATASIMAVGGQPSGTGQPR*
Ga0066903_1053578472	3300005764	Tropical Forest Soil	MFRHRSATPAGVAGNDEVRSLGDNGASIQGSAGNARADPVTASITAVGT*
Ga0066903_1067325892	3300005764	Tropical Forest Soil	ALCKEVFRHYPMFRHRSATPAGVTGNGEVRSPGDNVTSIERSAVDARADTATARITAVGGQPSGSGQPR*
Ga0075028_1003296492	3300006050	Watersheds	MFRHRSATPAGVAGNDEVRSLGDNGASILGSAGNAPADSATASITAVGS*
Ga0075017_1009408161	3300006059	Watersheds	MRIAQEGFRHYPMFRHRSATPAGVAGNGEVRSLGDNEASILGSAENARADSATASITAVGS*
Ga0075017_1012188702	3300006059	Watersheds	SATPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR*
Ga0075017_1013569981	3300006059	Watersheds	HYPMFRHRSATPAGVTGNGEVRSLGDNVTSILGSAVDARADTATASITAVGGQQSGSGQPR*
Ga0075015_1003140742	3300006102	Watersheds	YPMFRHWSATPAGVTGNGDVRSLGDNVTSILGSAVNARAHTATASITAVGGQQSGTGQSR
Ga0075015_1003545481	3300006102	Watersheds	MFRHRSATPTGVAGNGEVRSLGNNVTSIYGSVVKARADTTTASTKAVGG
Ga0075015_1003765472	3300006102	Watersheds	SATPAGVTGNGEVRSLGDNVTSILGSAVDARADTATASITAVGGQQSGSGQPR*
Ga0070712_1013081632	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MFRHRSATPAGVTGNGEVRSLGDNVTSILGSAVNARADTATASITAVGGQQPGQVNPGEVLIKA
Ga0074054_120369451	3300006579	Soil	HYPMFRHRSATPAGVAGNGEVRSPGDNVTSILGSAVDARADTATASIMAVGGQQSGSGQPR*
Ga0079221_113877172	3300006804	Agricultural Soil	MFRHRSATPAGVAGNDEVRSLGDNAASILGSAGNAPADSATASITAVGS*
Ga0114129_130236531	3300009147	Populus Rhizosphere	RHYPMFRHRSATLAGVTGNGEVRSLGDNVTSISGSAVGARADTATARITAVGGQPSGSGQPR*
Ga0116214_12746401	3300009520	Peatlands Soil	MFRHRSATPEGVAGNGEVRSLGNNVTSIYGSVVKARADTTTANTKAVGGQQSGVRSTQVK
Ga0116222_10203531	3300009521	Peatlands Soil	MFHHRSATPAGVAGNGEVRSLGNNVTSIYGSVVKARADTTTASTKTVGGQQSGVRSGSITV*
Ga0116225_11461192	3300009524	Peatlands Soil	MVFRHYPMFRHWSVTPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAV
Ga0116217_105795791	3300009700	Peatlands Soil	MFRHWSATPAGVTGNGDVRSLGHNVTSSLGSAVNARADTATASITAVGGQESGTGQPR
Ga0116219_104019623	3300009824	Peatlands Soil	MVFRHYPMFRHRSATPAGVPGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSG
Ga0116219_107972621	3300009824	Peatlands Soil	MFRHRSATPAGVTGDGEVRSPGDNVTSILGSAVNARADTATASITAVG
Ga0116223_107025611	3300009839	Peatlands Soil	SATPACVTGNGEVRSLGDNVTSILGSAVDARADTATVSITAVGGQQSGARSTQVKC*
Ga0127503_104281541	3300010154	Soil	HYPMFRHRSATPAGVTGNGEVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGSGQPR*
Ga0063827_1858662	3300010164	Peatlands Soil	MVCRHYPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR*
Ga0074046_100530683	3300010339	Bog Forest Soil	MFRQRSATPAGVTGNGDVRSLGDNVTSILGSAVNVRADTATASITAVGGQQSGTGQPR*
Ga0074046_106962931	3300010339	Bog Forest Soil	YPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARADMATASITAVGNQQSGTGQPR
Ga0074046_107297401	3300010339	Bog Forest Soil	SATPAGVTGNGDVRSLGDNVTSILGSAVNARAHTATASITAVGGQQSGTGQSR*
Ga0074046_109112821	3300010339	Bog Forest Soil	MFRHRSATPAGVPGNGDVRSLGDNVTLILGSAVNAQADTAIASITAVGGQQSGTGQPRCSADKGREQKQA*
Ga0134125_109141701	3300010371	Terrestrial Soil	MRYAKEGFRHYPMFRHRSATPAGVISNGEVRSPGDNVTSISRSVVDARAETATASITAVG
Ga0136449_10007867311	3300010379	Peatlands Soil	MFRHRSATPAGVTGNGEVRSLGDNVTSILGSAVDARADTATASITAVGGQQSGAWSTQ
Ga0136449_1008764072	3300010379	Peatlands Soil	MRYVKEVFWYYPMFRHRSATPAGVTGNGEVRSLGNNVTSILGSAVNARADTATVSIKVVGGQQSGARSTQVKCC*
Ga0136449_1009994631	3300010379	Peatlands Soil	MVFRHYPMFRHRSATSAGVTGNRDVRSLGDNVTSILGSAVNARADTATASITAVGGRQ
Ga0136449_1013100641	3300010379	Peatlands Soil	MFRHRSATPAGVTGNGEVRSLGDNVTSILGSAVNARANTATASITAVRGQQSGVRSI
Ga0136449_1019691081	3300010379	Peatlands Soil	MFRHRSATPAGVTGNGEVRSLGDNVTSILGSAVDARADTATASITAVGGQQSGS
Ga0136449_1019718641	3300010379	Peatlands Soil	MFHHRSVTPAGIAGNGEVRSLGNNVTSIYGSVVKARADTTTASTKAVGGQQSGVRS
Ga0136449_1021837711	3300010379	Peatlands Soil	HYPMFRHRSATPAGVTGNGGVRSLGDNVTSILGSAANARADAATASIKAVGGQQSGTGQPR*
Ga0136449_1045481071	3300010379	Peatlands Soil	MFRHRSATPAGVPGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSG
Ga0126349_12581001	3300010861	Boreal Forest Soil	MFRHRSATPAGVAGNGEVRSLGNNVTSIYGSVVTVRADTTTASTKAVGGQQSGVRLTQ
Ga0138535_1002001	3300011015	Peatlands Soil	AKMVFRHYPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR*
Ga0138523_10503611	3300011054	Peatlands Soil	SMFRHRSATPAGVAGNGEVRSLGNNVTSIYGSVVKARADTTTASTKAVGGQQSGVRSTQVKC*
Ga0138570_10995171	3300011087	Peatlands Soil	AGVTGNGDVRSLGDNVTSILGSAVNARADTATASIMAVGGQQSGTGQPR*
Ga0151490_16342822	3300011107	Soil	NALCKEVFRHYPMFRHRSATPAGVTGNGEVRSPGDNVTSIERSAVGARADTATASITAVGGQQSGSGQPR*
Ga0150985_1024515241	3300012212	Avena Fatua Rhizosphere	MFRHRSATPAGVTGNGEVRSLGDNGTSILGSAVDARADTATASITAVGGQQSGSGQPR
Ga0150985_1101205151	3300012212	Avena Fatua Rhizosphere	RHYPMFRHRSATPAGVTGNGEVRSLGDNVASIFGSAVDARADTATASITAVGSQQSGTRSTHVKC*
Ga0137361_117453921	3300012362	Vadose Zone Soil	TPAGVTGNGGVRSLGDNVTSILGSVVNAPADTATASITAVGGQQSGSGQPR*
Ga0137397_110743641	3300012685	Vadose Zone Soil	HYPMFRHRSATPAGVAGNGGVRSLGDNVTSILGSAVGARADTATASITAVGGQQSGSGQLR*
Ga0137394_114165321	3300012922	Vadose Zone Soil	CKEVFRHYPMFRHRSATPAGGAGNGAVRSLGDNVTSILGSAVDARADTATASITAVGGQQSGSGQPR*
Ga0164304_115260981	3300012986	Soil	FKEVSRHYPMFRHRSATPAGAAGNGEVRSLGDNVTSIERSAVGARADTATASITAVGSQQFGTGSTYVKCR*
Ga0181521_100206896	3300014158	Bog	MFRHRSATPAGVAGNGEVRSLGNNVTSIYGSVVKARADTTTASTKAVGG
Ga0181538_105095221	3300014162	Bog	MFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQP
Ga0182024_103778953	3300014501	Permafrost	MFRHWSATPAGVTGNGEVRSLGDNVTSILGSVVNARADTATASIKAVGG
Ga0182024_115919092	3300014501	Permafrost	MFRHWPATSAGVTGNGEVRSLGDNVTSILGSVVNARADTATASIKAVGG
Ga0182024_128854501	3300014501	Permafrost	MFRHRSATSAGVAGNGEVRSLGDNVTSILGSVVNARADTATASIKAVGGQQSG
Ga0134073_102743282	3300015356	Grasslands Soil	AGVTGNGEVRSLGDNVTSIKGSAVDARADTATASITAVGGQQSGSGQPR*
Ga0132257_1024724641	3300015373	Arabidopsis Rhizosphere	HGSVMRIAQEGFRHYPMFRHRSATLAGVAGNDEVRSLGDNGASILESAENAPVDSATASIRAVGT*
Ga0182039_110000921	3300016422	Soil	GGFGHYPMFRHRSATPAGLTGNGEVRSPGDNVTSIKGSAVGARADTATASITAVGGQPSGSGQPR
Ga0181505_104269471	3300016750	Peatland	HRSATPAGVTGNGEVRSLGNNVTSIFGSVVNARADTATASIKAVGGQQPGARSTQVKCR
Ga0187818_100534942	3300017823	Freshwater Sediment	MVFRHYPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARADTTTASITAVGGQQSGTGQPR
Ga0187819_101039121	3300017943	Freshwater Sediment	MVFRHYPMFRHRSATPVGVTGNGDVRSLGDNVTSILGSAVNARADTTTASITAVGGQQSGTGQPR
Ga0187776_114585571	3300017966	Tropical Peatland	RHYPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGLGQPR
Ga0187783_100166275	3300017970	Tropical Peatland	MFRHRSATPAGVTGNGEVRSLGDNVTSILGSVVNARADTATASITAVGGQQSSVDRGQELSHFRGQN
Ga0187867_100244701	3300018033	Peatland	MVFRHYPMFRHRSATPVGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR
Ga0187773_108954321	3300018064	Tropical Peatland	MFRHRSATPAGVTGNGEVRSLGDNVTSIRGSAVNARADTATASITAVGGQQSGSGQPR
Ga0187769_100975722	3300018086	Tropical Peatland	YPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNAQADTATASITAVGGQQSGTGQPR
Ga0187769_106769901	3300018086	Tropical Peatland	MVCRHYPMFRHRSATPAGVTGNEEVRSLGDNVTSILGSAVNARADTATASITAVGGQQSG
Ga0066662_107954211	3300018468	Grasslands Soil	MFRHRSATPAGVTGNGGVRSLGDNVTSILGSAVDARADTATASITAVGGQQSGTG
Ga0187791_14910931	3300019245	Peatland	PAGVTGNGEVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR
Ga0187792_14523301	3300019265	Peatland	YPMFRHRSATPAGVTGNGEVRSLGDNVTSILGSVVDARADTATASITAVGGQQSGRSQPR
Ga0210399_110785831	3300020581	Soil	IAQEGFRHYPMFRHRSATPAGVAGNGEVRSLGDNVTSILGSAGNARADSATASITAVGS
Ga0210406_113542671	3300021168	Soil	MRYAKEVSRHYPMFRHRSATPAGVTGNGEVRSLGDNVTSIERSAVGARADTATASITAVGGQQSGRGQ
Ga0210386_101276362	3300021406	Soil	AGVTGNGEVRSLGDNVTSILGSAVDARADTATASITAVGGQQSGSGQPR
Ga0208455_10061842	3300025453	Peatland	MVFRHYPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQPR
Ga0208199_11094591	3300027497	Peatlands Soil	MVFRHYPMFRHWSATPAGVTGNGNVRSLGDNVTSILGSAVNARADTATASITAVGGQQSG
Ga0208042_10067112	3300027568	Peatlands Soil	MVFRHYPMFRHRSATPAGVPGNGDVRSLGDNVTSILGPAVNARADTATASITAVGGQQSGTGQPR
Ga0208043_10179931	3300027570	Peatlands Soil	MVFRHYPMFRHRSATPGGVTGNGDVRSLGDNVTSILGSAVNAQADTATASITAVGGQQSGTGQLR
Ga0209220_11362291	3300027587	Forest Soil	HYPMFRHRSATPAGVAGNGEVRSLGDNVTSILGSAVNARADTATASITAVGGQQSGTGQP
Ga0208565_11813761	3300027662	Peatlands Soil	MFHHRSATPAGVAGNGEVRSLGNNVTSIYGSVVKARADTTTASTKAVGGQQSGVRSTQVK
Ga0209447_100282962	3300027701	Bog Forest Soil	MRIAQEGFRHYPMFRHRSATPAGVAGNGEVRSLGDNVTSILGSVVDARADTATASITAVGGQQSGSGQPR
Ga0209040_100424724	3300027824	Bog Forest Soil	MVFRHYPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNARAGTATASITAVGGQQSGTGQPR
Ga0209039_103685871	3300027825	Bog Forest Soil	RSATPAGVAGNGEVRSLGNNVTSIYGSVVKARVDTTTASTKAVGGQQSGVRSTQVKY
Ga0209048_100992612	3300027902	Freshwater Lake Sediment	MVFRHYPMFRHRSATPAGVTGNGDVRSLGDNVTSILGSAVNAQADTATASITAVGGQQSGTGQPR
Ga0311340_115835011	3300029943	Palsa	ATPAGVTGNGEVRSLGNNVTSILGSVVNARADTTTASITAVGGQQSGSGQPR
Ga0316363_101152881	3300030659	Peatlands Soil	MFRHRSATPAGVAGNGEVRSLGDNVTSILGSAVDARADTATVSITAVGGQQSGA
Ga0310039_100418781	3300030706	Peatlands Soil	PYQTTTPSTSHPNSSSALGVTGNGDVRSLGDNVTSILGSAVNAQADTATASITAVGGQQSGTGQLR
Ga0310039_103942741	3300030706	Peatlands Soil	FRHRSATPAGVTGNGEVRSLGDNVTSILGSAVDARADTATASITAVGGQQSGAWSTQVKC
Ga0310038_104616931	3300030707	Peatlands Soil	MRYAKEVFRHYPMFRHWSATPAGVTGNGDIRSLGDNVTSMLGSAVNAQADTATASITTVGGQ
Ga0099845_15722661	3300030975	Boreal Forest Soil	HYPMFRHRSATPAGVTGNGEVRSLGDNVASILGSAGNARADPATASITAVGSQQSGARSTHVKC
Ga0302324_1033241002	3300031236	Palsa	PMFRHRSATPAGVTGNGEVRSLGNNVTSILGSVVNARADTATASIKAVGGQQSGARSTQVKRC
Ga0170820_145313291	3300031446	Forest Soil	ATPAGVTGNGEVRSLGDNVTSIFRSAVDARADTATASITAVGGQQSGSGQPR
Ga0310686_1094566091	3300031708	Soil	MFRHRSATPAGVTGNGGVRSLGDNVTSILGSAVNARANTATASITAVGGQQS
Ga0310686_1111730581	3300031708	Soil	MFRHWSATPAGITGNGEVRSLGDNVTSIERSAVNARADTATASIKAVGGQ
Ga0318537_100581881	3300031763	Soil	CNASRKEVSRHYPMFRHRSATPAGVAGNGGVRSPGDNVTSILGSAVDARADTATASITAVGGQQSGSGQPR
Ga0318552_106173432	3300031782	Soil	ATPAGVTGNGEVRSLGDNVTSIFGSVVDARADTATASITAVGG
Ga0318529_103707952	3300031792	Soil	FRHDPMFRHRSATPAGVTGNGEVRSLGDNVTSIFGSVVDARADTATASITAVGG
Ga0318523_104528681	3300031798	Soil	HALRQGGFRHDPMFRHRSATPAGVTGNGEVRSLGDNVTSIFGSVVDARADTATASITAVG
Ga0318567_106266022	3300031821	Soil	MFRHRSATPAGVTGNGEVRSLGDNVTSIFGSAVGARADTATASITAVG
Ga0318495_104766682	3300031860	Soil	MFRHRSATPAGVTGNGEVRSPGDNVTSIQGSAVGARADTATASITAVGGQPSGSGQPR
Ga0306919_111572201	3300031879	Soil	MFRHRSATPAGVTGNGEVRSPGDNVTSIQGSAVDARADTATASITAVG
Ga0310910_111926011	3300031946	Soil	RSATPAGVTGNGGVRSLGDNVTSILGSAVNARADTATASIAAVGGQQSGSGQLR
Ga0306924_122077261	3300032076	Soil	MFRHRSATPAGVTGNGGVRSPGDNVTSIQGSAVGARADTATASIAAVGG
Ga0311301_101718633	3300032160	Peatlands Soil	MFHHRSATPAGVAGNGEVRSLGNNVTSIYGSVVKARADTTTASTKAVGGRQSGVRSTQVK
Ga0311301_111304363	3300032160	Peatlands Soil	MFRHRSATPAGVAGNDEVRSLGNNVTSIYGSVVKARADTTTASTKAVGGQQSGVRST
Ga0311301_122573091	3300032160	Peatlands Soil	MFRHRSATPEGVAGNGEVRSLGNNVTSIYGSVVKARADTTTANTKAVGGQQS
Ga0306920_1020412261	3300032261	Soil	MFRHRSATPAGVTGNGEVRSPGENVTSILGSAVGARADTATASVTAVGGQQSGSGQPT
Ga0335075_107963641	3300032896	Soil	MRYAKEVFRHYPMFRHRSATPAGVTGNGEVRSLGDNVTSILGSVVNARADTATASIKAVGGQQSGAWSTQVQC
Ga0335072_115797161	3300032898	Soil	FHHRSATPAGVTGNGEVRSPGDNVTSILGSVVDARADTATASITAVGGQQSGAGSTQVKC
Ga0318519_108161221	3300033290	Soil	FSTCHALRQGGFRHDPMFRHRSATPAGVTGNGEVRSLGDNVTSIFGSVVDARADTATASITAVGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062953

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences