Metagenome / Metatranscriptome Family F062737

Basic Information
Family ID	F062737
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	43 residues
Representative Sequence	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Number of Associated Samples	113
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.62 %
% of genes near scaffold ends (potentially truncated)	63.85 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (67.692 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.769 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.385 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.10% β-sheet: 0.00% Coil/Unstructured: 61.90%
Feature Viewer

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Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00549	Ligase_CoA	56.92
PF02629	CoA_binding	20.77
PF08328	ASL_C	3.08
PF01553	Acyltransferase	1.54
PF02782	FGGY_C	0.77
PF01642	MM_CoA_mutase	0.77
PF13180	PDZ_2	0.77
PF08442	ATP-grasp_2	0.77
PF01029	NusB	0.77
PF13344	Hydrolase_6	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0045	Succinyl-CoA synthetase, beta subunit	Energy production and conversion [C]	57.69
COG0074	Succinyl-CoA synthetase, alpha subunit	Energy production and conversion [C]	56.92
COG0015	Adenylosuccinate lyase	Nucleotide transport and metabolism [F]	3.08
COG0458	Carbamoylphosphate synthase large subunit	Amino acid transport and metabolism [E]	1.54
COG0026	Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)	Nucleotide transport and metabolism [F]	0.77
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.77
COG1042	Acyl-CoA synthetase (NDP forming)	Energy production and conversion [C]	0.77
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.77

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.69 %
Unclassified	root	N/A	32.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.69 %
Unclassified	root	N/A	32.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.69 %
Unclassified	root	N/A	32.31 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.00 %
Unclassified	root	N/A	32.31 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.31 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	23.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.31 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.08 %
Ferrovales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales	1.54 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.31 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.08 %
Ferrovaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae	1.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.31 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.08 %
Ferrovum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum	1.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.31 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.08 %
Ferrovum myxofaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → Ferrovum myxofaciens	1.54 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_260473_len_1005_cov_11_758209	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c005486	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300000953\|JGI11615J12901_11494905	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300001686\|C688J18823_10047246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2976	Open in IMG/M
3300001686\|C688J18823_11041295	Not Available	519	Open in IMG/M
3300004058\|Ga0055498_10008017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1303	Open in IMG/M
3300004062\|Ga0055500_10000208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5232	Open in IMG/M
3300004081\|Ga0063454_101104611	Not Available	648	Open in IMG/M
3300004463\|Ga0063356_104557732	Not Available	596	Open in IMG/M
3300005168\|Ga0066809_10185364	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005295\|Ga0065707_10050202	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300005336\|Ga0070680_101132107	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005438\|Ga0070701_10767745	Not Available	655	Open in IMG/M
3300005526\|Ga0073909_10477763	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005564\|Ga0070664_102289006	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005764\|Ga0066903_108519909	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300005836\|Ga0074470_11308519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6097	Open in IMG/M
3300005844\|Ga0068862_100361956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1348	Open in IMG/M
3300006578\|Ga0074059_11590797	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300006806\|Ga0079220_10152146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1278	Open in IMG/M
3300006844\|Ga0075428_100002865	All Organisms → cellular organisms → Bacteria → Proteobacteria	18808	Open in IMG/M
3300006847\|Ga0075431_100995100	Not Available	805	Open in IMG/M
3300006847\|Ga0075431_101597928	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300006852\|Ga0075433_10002489	All Organisms → cellular organisms → Bacteria	14019	Open in IMG/M
3300006853\|Ga0075420_101229535	Not Available	643	Open in IMG/M
3300006880\|Ga0075429_101110738	Not Available	690	Open in IMG/M
3300006918\|Ga0079216_10029969	All Organisms → cellular organisms → Bacteria → Proteobacteria	2168	Open in IMG/M
3300006918\|Ga0079216_10804967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	691	Open in IMG/M
3300007265\|Ga0099794_10084628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1568	Open in IMG/M
3300009053\|Ga0105095_10054879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2143	Open in IMG/M
3300009078\|Ga0105106_10838149	Not Available	655	Open in IMG/M
3300009081\|Ga0105098_10465720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	638	Open in IMG/M
3300009147\|Ga0114129_10153117	All Organisms → cellular organisms → Bacteria	3155	Open in IMG/M
3300009156\|Ga0111538_12882905	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300009177\|Ga0105248_11432821	Not Available	782	Open in IMG/M
3300009814\|Ga0105082_1053817	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300009840\|Ga0126313_10992882	Not Available	687	Open in IMG/M
3300010322\|Ga0134084_10387576	Not Available	542	Open in IMG/M
3300010361\|Ga0126378_13386149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300010403\|Ga0134123_11212130	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300010403\|Ga0134123_12273163	Not Available	605	Open in IMG/M
3300012142\|Ga0137343_1007706	All Organisms → cellular organisms → Bacteria → Proteobacteria	1286	Open in IMG/M
3300012159\|Ga0137344_1082884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	591	Open in IMG/M
3300012164\|Ga0137352_1111112	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300012212\|Ga0150985_100504499	Not Available	830	Open in IMG/M
3300012212\|Ga0150985_105762329	Not Available	723	Open in IMG/M
3300012469\|Ga0150984_119612939	Not Available	765	Open in IMG/M
3300012484\|Ga0157333_1004622	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300012496\|Ga0157353_1022535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	618	Open in IMG/M
3300012900\|Ga0157292_10087897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	905	Open in IMG/M
3300012929\|Ga0137404_11346394	Not Available	659	Open in IMG/M
3300012944\|Ga0137410_11080629	Not Available	686	Open in IMG/M
3300012944\|Ga0137410_11529511	Not Available	583	Open in IMG/M
3300012961\|Ga0164302_10832331	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012961\|Ga0164302_11589028	Not Available	543	Open in IMG/M
3300015245\|Ga0137409_10166088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2010	Open in IMG/M
3300015371\|Ga0132258_11726552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1579	Open in IMG/M
3300015371\|Ga0132258_12174758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1393	Open in IMG/M
3300018053\|Ga0184626_10225481	Not Available	790	Open in IMG/M
3300018422\|Ga0190265_10291256	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300018422\|Ga0190265_12650781	Not Available	598	Open in IMG/M
3300018432\|Ga0190275_12432351	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300018920\|Ga0190273_12413029	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300020202\|Ga0196964_10103015	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300020202\|Ga0196964_10285313	Not Available	780	Open in IMG/M
3300020202\|Ga0196964_10510973	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300021066\|Ga0196980_1053304	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300021082\|Ga0210380_10325800	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300021090\|Ga0210377_10368753	Not Available	861	Open in IMG/M
3300024246\|Ga0247680_1010514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1359	Open in IMG/M
3300024284\|Ga0247671_1033009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	790	Open in IMG/M
3300024287\|Ga0247690_1032174	Not Available	607	Open in IMG/M
3300024290\|Ga0247667_1018050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → Ferrovum myxofaciens	1376	Open in IMG/M
3300024323\|Ga0247666_1018909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1483	Open in IMG/M
3300025318\|Ga0209519_10122010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1538	Open in IMG/M
3300025318\|Ga0209519_10133325	All Organisms → cellular organisms → Bacteria → Proteobacteria	1468	Open in IMG/M
3300025899\|Ga0207642_10656042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	658	Open in IMG/M
3300025904\|Ga0207647_10147398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Ferrovales → Ferrovaceae → Ferrovum → Ferrovum myxofaciens	1377	Open in IMG/M
3300025906\|Ga0207699_10818403	Not Available	685	Open in IMG/M
3300025906\|Ga0207699_11311689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	536	Open in IMG/M
3300025929\|Ga0207664_10917062	Not Available	786	Open in IMG/M
3300025931\|Ga0207644_11038193	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300025937\|Ga0207669_11784066	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300025938\|Ga0207704_10144256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1670	Open in IMG/M
3300025944\|Ga0207661_10776305	All Organisms → cellular organisms → Bacteria → Proteobacteria	882	Open in IMG/M
3300025945\|Ga0207679_11912708	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300025965\|Ga0210090_1006407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1605	Open in IMG/M
3300026047\|Ga0208658_1015537	Not Available	612	Open in IMG/M
3300026088\|Ga0207641_10038359	All Organisms → cellular organisms → Bacteria → Proteobacteria	4005	Open in IMG/M
3300026523\|Ga0209808_1297179	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300026815\|Ga0207442_101458	Not Available	917	Open in IMG/M
3300026820\|Ga0207603_100895	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300027378\|Ga0209981_1004563	All Organisms → cellular organisms → Bacteria → Proteobacteria	1820	Open in IMG/M
3300027713\|Ga0209286_1010363	Not Available	3296	Open in IMG/M
3300027775\|Ga0209177_10313238	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300027821\|Ga0209811_10034039	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300027882\|Ga0209590_10953987	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300027886\|Ga0209486_10145201	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300027886\|Ga0209486_11023765	Not Available	556	Open in IMG/M
3300027886\|Ga0209486_11113380	Not Available	537	Open in IMG/M
3300027903\|Ga0209488_11040240	Not Available	564	Open in IMG/M
3300027979\|Ga0209705_10106448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1523	Open in IMG/M
3300028293\|Ga0247662_1030078	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300028590\|Ga0247823_11205770	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300028802\|Ga0307503_10636280	Not Available	593	Open in IMG/M
3300028812\|Ga0247825_10632714	Not Available	767	Open in IMG/M
3300030006\|Ga0299907_10914538	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300030294\|Ga0311349_10186788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1950	Open in IMG/M
3300031152\|Ga0307501_10231696	Not Available	542	Open in IMG/M
3300031199\|Ga0307495_10061696	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300031538\|Ga0310888_10326842	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300031538\|Ga0310888_10641015	Not Available	648	Open in IMG/M
3300031720\|Ga0307469_10013893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4099	Open in IMG/M
3300031731\|Ga0307405_10848069	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300031852\|Ga0307410_11801172	Not Available	544	Open in IMG/M
3300031854\|Ga0310904_11414768	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031892\|Ga0310893_10159606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	883	Open in IMG/M
3300031903\|Ga0307407_11311566	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300031908\|Ga0310900_11205975	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300032002\|Ga0307416_103895529	Not Available	500	Open in IMG/M
3300032017\|Ga0310899_10264872	Not Available	786	Open in IMG/M
3300032144\|Ga0315910_10343315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1138	Open in IMG/M
3300032144\|Ga0315910_10401788	All Organisms → cellular organisms → Bacteria → Proteobacteria	1049	Open in IMG/M
3300032211\|Ga0310896_10312661	Not Available	816	Open in IMG/M
3300032256\|Ga0315271_11048027	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300033550\|Ga0247829_10732903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	823	Open in IMG/M
3300033551\|Ga0247830_10613983	Not Available	861	Open in IMG/M
3300034384\|Ga0372946_0025997	Not Available	2584	Open in IMG/M
3300034417\|Ga0364941_013753	All Organisms → cellular organisms → Bacteria → Proteobacteria	1565	Open in IMG/M
3300034819\|Ga0373958_0175452	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.15%
Host-Associated	Host-Associated	23.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.85%
Plants	Host-Associated → Plants	23.85%
Aquatic	Environmental → Aquatic	12.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.46%
Freshwater	Environmental → Aquatic → Freshwater	6.15%
Sediment	Environmental → Aquatic → Sediment	3.85%
Marine	Environmental → Aquatic → Marine	2.31%
Peat	Environmental → Terrestrial → Peat	0.77%
Floodplain	Environmental → Terrestrial → Floodplain	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.85%
Sand	Environmental → Terrestrial → Soil → Sand	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.31%
Lake	Environmental → Aquatic → Freshwater → Lake	0.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.15%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.85%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	3.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.08%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.54%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.77%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	3.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.08%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.31%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.31%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.54%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.54%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.54%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.54%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.77%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.77%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.77%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.77%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.77%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012142	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT499_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012484	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510	Environmental	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021066	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3_10-13C	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025965	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026047	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026815	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4w-12 (SPAdes)	Environmental	Open in IMG/M
3300026820	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-A (SPAdes)	Environmental	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00913650	2088090008	Soil	MHVVHTAAEPPNQGRMIFAMIGWTSNNRNADRKIVAA
ARSoilOldRDRAFT_0054862	3300000044	Arabidopsis Rhizosphere	PAEPPNQGRICFAMIGWTRNSRNDERKIVAAYGSVATREYGLASV*
JGI11615J12901_114949051	3300000953	Soil	HGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV*
C688J18823_100472465	3300001686	Soil	VHTPAEPPNHGRICLAMIGCTRNSRNDERKIVVAYGSVAASG*
C688J18823_110412952	3300001686	Soil	PAEPPNHGRICFAMIGCTRNSRNDERKIVPAYGIVLNSGVRIT*
Ga0055498_100080173	3300004058	Natural And Restored Wetlands	PNHGRICLAMIGWTRNSRNDERKIVAAYGRVAASGARITWA*
Ga0055500_100002084	3300004062	Natural And Restored Wetlands	MHVVHTAAPPPNQGRIRRAISGWTRNSRNDDRKIVTAYSRGAGFRC*
Ga0063454_1011046112	3300004081	Soil	PAEPPNHGRICLAMIGCTRNSRNDERKIVVAYGSVAASG*
Ga0063356_1045577321	3300004463	Arabidopsis Thaliana Rhizosphere	ASSTLWKNTRQVVHTAAEPPNHGRICLAMIGWTRNSRNDERKMVAAYGSVATSG*
Ga0066809_101853642	3300005168	Soil	VFQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATRE*
Ga0065707_100502022	3300005295	Switchgrass Rhizosphere	VVQTPAEPPNHGRICFAMIGWTRNSRNDERKIVAAYGSVATREYGLTSV*
Ga0070680_1011321072	3300005336	Corn Rhizosphere	RQVVHTPAEPPNHGRICLAMIGWTRNSRNDDRKIVPAYGMVLNSGVRIT*
Ga0070701_107677452	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VHTAAEPPNHGRICLAMIGCTRKSRNDERKIVPAYGSVASRG*
Ga0073909_104777632	3300005526	Surface Soil	KNTRQVVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATRE*
Ga0070664_1022890062	3300005564	Corn Rhizosphere	PNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV*
Ga0066903_1085199092	3300005764	Tropical Forest Soil	NHGRICLAMIGWTRNSRNDDRKMVAAYGSVASSGWRIT*
Ga0074470_113085194	3300005836	Sediment (Intertidal)	MQVVHTAAVPPNQGRIWRAISGCTRNNRNEDRKIVAA*
Ga0068862_1003619563	3300005844	Switchgrass Rhizosphere	RMLWKNTRHVVHTAAEPPNHGRICLAMIGCTRNSRKDERKMVAA*
Ga0074059_115907972	3300006578	Soil	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATRE*
Ga0079220_101521463	3300006806	Agricultural Soil	EPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVAASGVRIT*
Ga0075428_1000028656	3300006844	Populus Rhizosphere	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAA*
Ga0075431_1009951002	3300006847	Populus Rhizosphere	QVVHTAAEPPNHGRICLAMIGCTRNSRNEERKIVPA*
Ga0075431_1015979281	3300006847	Populus Rhizosphere	TAAEPPNQGRICLAMIGCTRNSRNDERKIVAAYGSVAASG*
Ga0075433_1000248920	3300006852	Populus Rhizosphere	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV*
Ga0075420_1012295352	3300006853	Populus Rhizosphere	NTRQVVHTAAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVATSGVRAARV*
Ga0075429_1011107382	3300006880	Populus Rhizosphere	ASSTLWKNTRQVVHTAAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVATSGVRAARV
Ga0079216_100299693	3300006918	Agricultural Soil	VVHTPAEPPNQGRICLAMIGWTRNSRNDERKIVAA*
Ga0079216_108049672	3300006918	Agricultural Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNDDRKIVAA*
Ga0099794_100846283	3300007265	Vadose Zone Soil	WKNTRQVAHTAAEPPNHGRICFAMIGCTRNSRNDERKIVAA*
Ga0105095_100548793	3300009053	Freshwater Sediment	VVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGRVAASGSLAT*
Ga0105106_108381491	3300009078	Freshwater Sediment	NSNRNWKNTRQVVHTAADPPNHGRICFAMTGWTRKSKKALVNIVAA*
Ga0105098_104657202	3300009081	Freshwater Sediment	VVHTAAEPPNQGRICLAMMGWTRNSRNDERNIVAAYGSVASSESGVATE*
Ga0114129_101531175	3300009147	Populus Rhizosphere	VVHTPAEPPNHGRICLAMIGCTRNSRNDDRKIVAAYGSAAASG*
Ga0111538_128829052	3300009156	Populus Rhizosphere	VVHTPAEPPNHGRICLAMIGWTRNSRKDERKIVAA*
Ga0105248_114328211	3300009177	Switchgrass Rhizosphere	AWKNTRQVAQTATLPPKRGRISLAMIGWTRNSRNDERKIVAA*
Ga0105082_10538172	3300009814	Groundwater Sand	VVHTAAEPPNQGRICLAMIGWTRNSRNDDRKIVAAYGSVATSEYRVARV*
Ga0126313_109928822	3300009840	Serpentine Soil	LWKNTRQVVHTPAEPPNHGRICFAMIGCTRNSRNDERKIVPA*
Ga0134084_103875761	3300010322	Grasslands Soil	NTMHVVHTAADPPNHGRICLAMIGCTRNSRNDERKIVAA*
Ga0126378_133861491	3300010361	Tropical Forest Soil	MHVVHTAADPPNHGRINLAKTGWIRNRRNAAKKIADP*
Ga0134123_112121302	3300010403	Terrestrial Soil	AEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV*
Ga0134123_122731632	3300010403	Terrestrial Soil	AEPPNQGRICLAMIGWTRNSRNDDRKIVPAYGRVASRG*
Ga0137343_10077062	3300012142	Soil	VVQTAAEPPNHGRICLAMIGWTRKSRNDDRKIVAA*
Ga0137344_10828842	3300012159	Soil	VVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATSEYRVARV*
Ga0137352_11111122	3300012164	Soil	VVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAA*
Ga0150985_1005044992	3300012212	Avena Fatua Rhizosphere	PNHGRICLAMIGCTRNSRNDERNIVAAYGSVATIG*
Ga0150985_1057623292	3300012212	Avena Fatua Rhizosphere	VVQTPAEPPNQGRICLAMIGWTRNSRNDERKIVAA*
Ga0150984_1196129391	3300012469	Avena Fatua Rhizosphere	EPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVANSEYGLTSV*
Ga0157333_10046222	3300012484	Soil	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATREYGLASV*
Ga0157353_10225352	3300012496	Unplanted Soil	MQVVQTAEVPPNQGRICLAMIGWTRNSRNDERKIVAA*
Ga0157292_100878972	3300012900	Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKVVAAYGSVATRE*
Ga0137404_113463941	3300012929	Vadose Zone Soil	NTRQVVHTAAEPPNHGRICLAMIGWTRNSRNDERKMVAAYGRLASSGKRIT*
Ga0137410_110806292	3300012944	Vadose Zone Soil	MLWKKTRQVVHTAAEPPNHGRICLAMIGWTRNSRNEERKIVAA*
Ga0137410_115295112	3300012944	Vadose Zone Soil	GRICLAMIGCTRNSRNDERKIVAAYGIDPNSGVRIT*
Ga0164302_108323311	3300012961	Soil	VVQTPAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVAIRE*
Ga0164302_115890282	3300012961	Soil	NQGRICLAMIGWTRNSRNDDRKIVPAYGRVASRG*
Ga0137409_101660882	3300015245	Vadose Zone Soil	MQVVHTAEVPPNHGRICLAMIGWTRNSRNDERKIVAA*
Ga0132258_117265522	3300015371	Arabidopsis Rhizosphere	VVQTPAEPPNQGRICFAMIGWTRNSRNDERKIVAAYGSVATREYGLASV*
Ga0132258_121747583	3300015371	Arabidopsis Rhizosphere	WKKTRQVVHTPAEPPNHGRICLAMIGCTRNSRNDERKIVAA*
Ga0184626_102254812	3300018053	Groundwater Sediment	VDWKKTRHVVQTAAEPPNHGRICLAMIGWTRNSRNDERKMVAA
Ga0190265_102912563	3300018422	Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGRVAARGRRAT
Ga0190265_126507811	3300018422	Soil	LWKNTRQVVHTAAEPPNHGRICLAMIGWTRNSRNDDRKMVAAYGSVATSG
Ga0190275_124323511	3300018432	Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKMVAAYGSVATSG
Ga0190273_124130292	3300018920	Soil	VVHTPAEPPNHGRICLAMIGYTRNSRNDERKIVAA
Ga0196964_101030151	3300020202	Soil	PAEPPNHGRICLAMIGWTRNSRNDDRKIVPAYGSVAAKVRRAT
Ga0196964_102853132	3300020202	Soil	EPPNHGRICLAMIGWTRNRRNEERKIVAAYGSVASSG
Ga0196964_105109732	3300020202	Soil	PASSTLWKKTRHVVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0196980_10533042	3300021066	Soil	WKNTRQVVQTAAEPPNHGRICLAMIGCTRNSRNEDRKTVAA
Ga0210380_103258001	3300021082	Groundwater Sediment	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATRE
Ga0210377_103687532	3300021090	Groundwater Sediment	ASSRLWKNTMQVVHTPAEPPNQGRICLAMTGWTRNSRNDERKIVAA
Ga0247680_10105141	3300024246	Soil	HTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV
Ga0247671_10330092	3300024284	Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVPA
Ga0247690_10321741	3300024287	Soil	LVQPITAAEPPNHGRICLAMIGWTRNSRNDERKIVPA
Ga0247667_10180501	3300024290	Soil	TRHVVHTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV
Ga0247666_10189093	3300024323	Soil	PAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV
Ga0209519_101220103	3300025318	Soil	PARSTLWKKTRQVVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGRVAASGSLAT
Ga0209519_101333252	3300025318	Soil	VVHTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVAASG
Ga0207642_106560422	3300025899	Miscanthus Rhizosphere	MHVVQTAALPPNQGRMSRAISGCTRKSRNDERNIVAAYGSVATIG
Ga0207647_101473981	3300025904	Corn Rhizosphere	WKNTRQVVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0207699_108184032	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TRQVVHTLAEPPNHGRICLAMIGCTRKSRNDERKIVAAYGSVATSG
Ga0207699_113116891	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VVHTAALPPNHGRISRAISGWTRNSRNDDRKIVAA
Ga0207664_109170621	3300025929	Agricultural Soil	WKKTRQVVHTLAEPPNHGRICLAMIGCTRKSRNDERKIVAAYGSVATSG
Ga0207644_110381931	3300025931	Switchgrass Rhizosphere	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0207669_117840662	3300025937	Miscanthus Rhizosphere	MQVVQTTAVPPNQGRICLARRGWTRKSRKALRKIVAA
Ga0207704_101442561	3300025938	Miscanthus Rhizosphere	MLWKNTRHVVHTAAEPPNHGRICLAMIGCTRNSRNDERKIVAA
Ga0207661_107763052	3300025944	Corn Rhizosphere	QVVQTLAAPPNHGRICFAMIGWTRNSRNDDRKIVAAYGNVAASG
Ga0207679_119127082	3300025945	Corn Rhizosphere	PNHGRICLAMIGWTRNSRNDERKIVAAYGSVPSREYGRTRV
Ga0210090_10064072	3300025965	Natural And Restored Wetlands	SMHVVHTAAPPPNQGRIRRAISGWTRNSRNDDRKIVTAYSRGAGFRC
Ga0208658_10155372	3300026047	Natural And Restored Wetlands	TLWKNTRQVVHTAAEPPNHGRICLAMMGWTRNSRNDERKIVAAYGRVAARGARITWA
Ga0207641_100383592	3300026088	Switchgrass Rhizosphere	VFQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0209808_12971792	3300026523	Soil	AYPASSTLWKKTRQVVHTPAEPPNHGRICLAMIGCTRNSRNDDRKIVPA
Ga0207442_1014582	3300026815	Soil	MQVVHTAALPPNHGRICLAMIGWTRNSRKDERKIVAA
Ga0207603_1008952	3300026820	Soil	VFQTPAEPPNHGRICLAMIGWTRNSRNDERKVVAAYGSVATRE
Ga0209981_10045633	3300027378	Arabidopsis Thaliana Rhizosphere	STLWKKTRQVVHTAAEPPNQGRICLAMIGCTRNSRNDERKIVAA
Ga0209286_10103633	3300027713	Freshwater Sediment	VVQTAAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGRVAASGSLAT
Ga0209177_103132381	3300027775	Agricultural Soil	TRQVVHTPAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVAASGVRIT
Ga0209811_100340392	3300027821	Surface Soil	VVHTAAEPPNHGRICLAMIGWTRNSRNEERKIVPA
Ga0209590_109539872	3300027882	Vadose Zone Soil	TRQVVQTPAEPPNQGRICLAMIGWTRNSRNEERKIVPA
Ga0209486_101452012	3300027886	Agricultural Soil	VVQTAAEPPNHGRICLAMIGWTRNSRNDDRKIVAA
Ga0209486_110237651	3300027886	Agricultural Soil	RQVVHTAAEPPNHGRICLAMIGWTRNSRNDDRKMVAAYGNVATSG
Ga0209486_111133801	3300027886	Agricultural Soil	TLWKKTRQVVHTAAEPPNHGRICFAMIGCTRNSRNDERKIVAAYGSVATSE
Ga0209488_110402402	3300027903	Vadose Zone Soil	LWKNTMQVVHTAAEPPNHGRICLAMIGCTRNSRNEERKIVPA
Ga0209705_101064483	3300027979	Freshwater Sediment	KNTRHVVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0247662_10300782	3300028293	Soil	AYPASSTLWKKTRQVVHTPAEPPNHGRICLAMIGCTRNNRNDERKIVAA
Ga0247823_112057701	3300028590	Soil	LWKNNRQVVHTAAEPPNQGRICLAMIGCTRKSRNEDRKMVAAYGRVATSGVRAASV
Ga0307503_106362801	3300028802	Soil	WKNTMQVVHTPAEPPNQGRICLAITGCTRNSRNDDRKIVAA
Ga0247825_106327141	3300028812	Soil	KKTRQVVHTAAEPPNQGRICLAMIGCTRNSRKDERKIVAAYGSVATRE
Ga0299907_109145382	3300030006	Soil	VVQTPAEPPNQGRICLAMIGCTKNSRNDERKIVAAYGSVASRE
Ga0311349_101867882	3300030294	Fen	VLWKKTRQVVQTAAEPPNHGRICFAMIGWSRNSRNALVKIVRADYSMGGCDR
Ga0307501_102316961	3300031152	Soil	RQVVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVPA
Ga0307495_100616961	3300031199	Soil	QTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATREYGLARV
Ga0310888_103268421	3300031538	Soil	WKNTRQVVQTPAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVATRE
Ga0310888_106410151	3300031538	Soil	RQVVQTAAEPPNQGRICPAMIGCTRNSRNDERKIVAAYGSVATREYGLARV
Ga0307469_100138931	3300031720	Hardwood Forest Soil	PPNHGRICLAMIGWTRNSRKDERKMVAAYGRLASSGKRIT
Ga0307405_108480692	3300031731	Rhizosphere	VVHTAAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0307410_118011722	3300031852	Rhizosphere	TRQVVHTAAEPPNQGRICLAMIGCTRNSRNDDRKMVAAYGSVATSGVRAASV
Ga0310904_114147681	3300031854	Soil	VVHTAADPPNHGRICFAMIGWTRNSRNDDRKIVPAYGSVASRG
Ga0310893_101596062	3300031892	Soil	MQVVHTAEVPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0307407_113115662	3300031903	Rhizosphere	PAEPPNQGRICLAMIGWTRNSRNDDRNIVAAYGNVPASE
Ga0310900_112059752	3300031908	Soil	KKTMHVVHTPSEPPNHGRICLAITGCTRNSRNDDRNIVAA
Ga0307416_1038955291	3300032002	Rhizosphere	TLWKKTRHVVQTAAEPPNHGRICLAMIGCTMNSRNDERKIVPAYGSVASNG
Ga0310899_102648721	3300032017	Soil	VVQTPAEPPNQGRICLAMIGCTRNSRNDERKIVAA
Ga0315910_103433152	3300032144	Soil	VVHTPAEPPNHGRICLAMIGWTRNSRNDERKIVAA
Ga0315910_104017882	3300032144	Soil	WKNTLQVVHTPADPPNHGRICLAMTGCTRNSRNDDRNIVAA
Ga0310896_103126612	3300032211	Soil	VHTAAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVATREYGLARV
Ga0315271_110480271	3300032256	Sediment	NSMQVVYTAAVPPNQGRICRAINGCTRNSKNEDKKIVAA
Ga0247829_107329032	3300033550	Soil	VVQTAAEPPNQGRICLAMMGWTRNSRNDERNIVAAYGSVASSESGVATE
Ga0247830_106139831	3300033551	Soil	QVVHTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVASSE
Ga0372946_0025997_2471_2578	3300034384	Soil	VVQTAAEPPNQGRICLAMIGCTRNSRNDERKIVAA
Ga0364941_013753_906_1037	3300034417	Sediment	VVQTPAEPPNHGRICLAMIGWTRNSRNDERKIVAAYGSVATRD
Ga0373958_0175452_2_121	3300034819	Rhizosphere Soil	PAEPPNHGRICLAMIGCTRNSRNDERKIVAAYGSVATRE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062737

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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