Metagenome / Metatranscriptome Family F062048

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F062048
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	80 residues
Representative Sequence	MPNVTQFQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS
Number of Associated Samples	89
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.08 %
% of genes near scaffold ends (potentially truncated)	41.98 %
% of genes from short scaffolds (< 2000 bps)	91.60 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (56.489 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.351 % of family members)
Environment Ontology (ENVO)	Unclassified (51.908 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.855 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.06% β-sheet: 0.00% Coil/Unstructured: 52.94%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03734	YkuD	19.85
PF02796	HTH_7	3.05
PF04392	ABC_sub_bind	2.29
PF00589	Phage_integrase	2.29
PF00999	Na_H_Exchanger	1.53
PF00654	Voltage_CLC	0.76
PF00239	Resolvase	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	19.85
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	19.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.29
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.53
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.53
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.53
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.53
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.53
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.76
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.76
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.49 %
All Organisms	root	All Organisms	43.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.49 %
cellular organisms	root	All Organisms → cellular organisms	43.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.53 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.49 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.49 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10215618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1012	Open in IMG/M
3300005332\|Ga0066388_100347560	Not Available	2129	Open in IMG/M
3300005332\|Ga0066388_102141546	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005332\|Ga0066388_106143415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300005332\|Ga0066388_106454048	Not Available	591	Open in IMG/M
3300005332\|Ga0066388_107121353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300005332\|Ga0066388_108288380	Not Available	518	Open in IMG/M
3300005363\|Ga0008090_15846107	Not Available	929	Open in IMG/M
3300005435\|Ga0070714_101355261	Not Available	695	Open in IMG/M
3300005436\|Ga0070713_101499026	Not Available	654	Open in IMG/M
3300005437\|Ga0070710_10429149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	891	Open in IMG/M
3300005437\|Ga0070710_10730058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300005439\|Ga0070711_100233640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1435	Open in IMG/M
3300005518\|Ga0070699_100304242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1431	Open in IMG/M
3300005764\|Ga0066903_101669561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1212	Open in IMG/M
3300005764\|Ga0066903_102353465	Not Available	1030	Open in IMG/M
3300005764\|Ga0066903_104018700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300005764\|Ga0066903_104986851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300005764\|Ga0066903_105705364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300005764\|Ga0066903_109036020	Not Available	504	Open in IMG/M
3300006028\|Ga0070717_11472834	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300006031\|Ga0066651_10282888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300006046\|Ga0066652_101487926	Not Available	629	Open in IMG/M
3300006057\|Ga0075026_100105654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1402	Open in IMG/M
3300006086\|Ga0075019_11023338	Not Available	534	Open in IMG/M
3300006175\|Ga0070712_100520058	Not Available	999	Open in IMG/M
3300006755\|Ga0079222_10794738	Not Available	771	Open in IMG/M
3300006804\|Ga0079221_10152293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1212	Open in IMG/M
3300009792\|Ga0126374_10386901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	972	Open in IMG/M
3300009792\|Ga0126374_11354828	Not Available	577	Open in IMG/M
3300010048\|Ga0126373_11375949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	771	Open in IMG/M
3300010303\|Ga0134082_10330144	Not Available	643	Open in IMG/M
3300010359\|Ga0126376_10039973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3251	Open in IMG/M
3300010361\|Ga0126378_11205880	Not Available	855	Open in IMG/M
3300010361\|Ga0126378_11735166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300010361\|Ga0126378_13016588	Not Available	536	Open in IMG/M
3300010366\|Ga0126379_11996919	Not Available	682	Open in IMG/M
3300010366\|Ga0126379_13354157	Not Available	536	Open in IMG/M
3300010376\|Ga0126381_103143389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300010398\|Ga0126383_10104696	Not Available	2538	Open in IMG/M
3300010398\|Ga0126383_13260005	Not Available	530	Open in IMG/M
3300012971\|Ga0126369_10948582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300016294\|Ga0182041_10780250	Not Available	852	Open in IMG/M
3300016319\|Ga0182033_11927996	Not Available	537	Open in IMG/M
3300016319\|Ga0182033_12044552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300016357\|Ga0182032_10026650	Not Available	3462	Open in IMG/M
3300016357\|Ga0182032_12026474	Not Available	505	Open in IMG/M
3300016371\|Ga0182034_11239993	Not Available	649	Open in IMG/M
3300016387\|Ga0182040_11384355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300016404\|Ga0182037_10548558	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300016404\|Ga0182037_10878930	Not Available	776	Open in IMG/M
3300016404\|Ga0182037_11187649	Not Available	670	Open in IMG/M
3300016422\|Ga0182039_10119845	All Organisms → cellular organisms → Bacteria → Proteobacteria	1982	Open in IMG/M
3300016422\|Ga0182039_11655538	Not Available	585	Open in IMG/M
3300016445\|Ga0182038_10039048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	3070	Open in IMG/M
3300016445\|Ga0182038_10486644	Not Available	1050	Open in IMG/M
3300018433\|Ga0066667_12299832	Not Available	504	Open in IMG/M
3300018482\|Ga0066669_11797798	Not Available	566	Open in IMG/M
3300021560\|Ga0126371_11616572	Not Available	774	Open in IMG/M
3300021560\|Ga0126371_12426935	Not Available	634	Open in IMG/M
3300025898\|Ga0207692_10312609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	959	Open in IMG/M
3300025898\|Ga0207692_10734215	Not Available	643	Open in IMG/M
3300025905\|Ga0207685_10088315	Not Available	1299	Open in IMG/M
3300025915\|Ga0207693_10828605	Not Available	712	Open in IMG/M
3300025916\|Ga0207663_10857492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300025928\|Ga0207700_10627683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	957	Open in IMG/M
3300026330\|Ga0209473_1193998	Not Available	775	Open in IMG/M
3300026683\|Ga0208210_100853	Not Available	543	Open in IMG/M
3300026700\|Ga0208474_103561	Not Available	500	Open in IMG/M
3300027070\|Ga0208365_1022331	Not Available	818	Open in IMG/M
3300027874\|Ga0209465_10280047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300031543\|Ga0318516_10165539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1271	Open in IMG/M
3300031543\|Ga0318516_10343732	Not Available	861	Open in IMG/M
3300031543\|Ga0318516_10810620	Not Available	528	Open in IMG/M
3300031544\|Ga0318534_10677576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300031546\|Ga0318538_10231882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	989	Open in IMG/M
3300031572\|Ga0318515_10102600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1501	Open in IMG/M
3300031573\|Ga0310915_10053622	Not Available	2613	Open in IMG/M
3300031573\|Ga0310915_10850525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300031590\|Ga0307483_1027184	Not Available	587	Open in IMG/M
3300031719\|Ga0306917_10419146	Not Available	1047	Open in IMG/M
3300031719\|Ga0306917_10953887	Not Available	670	Open in IMG/M
3300031723\|Ga0318493_10442766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300031748\|Ga0318492_10384999	Not Available	736	Open in IMG/M
3300031751\|Ga0318494_10457895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300031753\|Ga0307477_10230308	Not Available	1285	Open in IMG/M
3300031754\|Ga0307475_11276740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300031765\|Ga0318554_10645207	Not Available	595	Open in IMG/M
3300031770\|Ga0318521_10833868	Not Available	562	Open in IMG/M
3300031771\|Ga0318546_11185113	Not Available	537	Open in IMG/M
3300031777\|Ga0318543_10381512	Not Available	631	Open in IMG/M
3300031780\|Ga0318508_1209589	Not Available	559	Open in IMG/M
3300031792\|Ga0318529_10559347	Not Available	531	Open in IMG/M
3300031795\|Ga0318557_10324467	Not Available	707	Open in IMG/M
3300031795\|Ga0318557_10339423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300031796\|Ga0318576_10604622	Not Available	516	Open in IMG/M
3300031820\|Ga0307473_10201556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1182	Open in IMG/M
3300031823\|Ga0307478_10702419	Not Available	847	Open in IMG/M
3300031833\|Ga0310917_10003259	All Organisms → cellular organisms → Bacteria	8093	Open in IMG/M
3300031833\|Ga0310917_10535397	Not Available	796	Open in IMG/M
3300031833\|Ga0310917_10663093	Not Available	707	Open in IMG/M
3300031833\|Ga0310917_10768932	Not Available	651	Open in IMG/M
3300031859\|Ga0318527_10443628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300031896\|Ga0318551_10103677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1516	Open in IMG/M
3300031897\|Ga0318520_10051016	Not Available	2174	Open in IMG/M
3300031897\|Ga0318520_10657340	Not Available	653	Open in IMG/M
3300031910\|Ga0306923_11421596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300031942\|Ga0310916_10822157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300031942\|Ga0310916_11229648	Not Available	618	Open in IMG/M
3300031947\|Ga0310909_10352387	Not Available	1235	Open in IMG/M
3300031947\|Ga0310909_10475104	Not Available	1049	Open in IMG/M
3300031947\|Ga0310909_11658792	Not Available	506	Open in IMG/M
3300031954\|Ga0306926_11062297	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300032001\|Ga0306922_10320906	All Organisms → cellular organisms → Bacteria → Proteobacteria	1663	Open in IMG/M
3300032010\|Ga0318569_10432276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300032042\|Ga0318545_10218184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300032043\|Ga0318556_10291209	Not Available	853	Open in IMG/M
3300032043\|Ga0318556_10465355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300032059\|Ga0318533_10308432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1149	Open in IMG/M
3300032059\|Ga0318533_10491896	Not Available	899	Open in IMG/M
3300032059\|Ga0318533_10574344	Not Available	827	Open in IMG/M
3300032063\|Ga0318504_10302337	Not Available	757	Open in IMG/M
3300032068\|Ga0318553_10552387	Not Available	603	Open in IMG/M
3300032076\|Ga0306924_10245331	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300032091\|Ga0318577_10469238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300032205\|Ga0307472_100403661	Not Available	1144	Open in IMG/M
3300032261\|Ga0306920_100019464	All Organisms → cellular organisms → Bacteria → Proteobacteria	9426	Open in IMG/M
3300032261\|Ga0306920_102789086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300033289\|Ga0310914_10657128	Not Available	943	Open in IMG/M
3300033289\|Ga0310914_10677206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	926	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.47%
Aquatic	Environmental → Aquatic	1.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.47%
Sediment	Environmental → Aquatic → Sediment	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.81%
Loam	Environmental → Terrestrial → Soil → Loam	23.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.53%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.53%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.29%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026683	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN352 (SPAdes)	Environmental	Open in IMG/M
3300026700	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN350 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_102156182	3300004633	Tropical Forest Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESDWLPPRFVWQNDADLFAS*
Ga0066388_1003475601	3300005332	Tropical Forest Soil	MPNVRQFQPVAWWWTRRQIGRDLRERYNVLKNLPAKLLTLIRTLDATEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS*
Ga0066388_1021415461	3300005332	Tropical Forest Soil	MARIGQGLRERYEVPKEAPPKLLALLVKLDATEGDYLLRYTPPLERRSVGESDWLPPRFVWENDVDFWP*
Ga0066388_1061434152	3300005332	Tropical Forest Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESDWLPPKFVWQNDADLFAS*
Ga0066388_1064540481	3300005332	Tropical Forest Soil	VSGMPKVTRWTRELKERYHVLKDLPAKLLTLIRKLDAMEGNFLLRYAPPLERRGVEESDWLPPRFVWQRDADLFLG*
Ga0066388_1071213532	3300005332	Tropical Forest Soil	SMPNVTNFQPVAWWWTRRRIGRVLRERYNVLKDLPPKLLMLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0066388_1082883802	3300005332	Tropical Forest Soil	MPNVTHFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLRELVI
Ga0008090_158461072	3300005363	Tropical Rainforest Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVSESDWLPPRFVWQNDADLFAS*
Ga0070714_1013552612	3300005435	Agricultural Soil	VSSMPNVTNFQPVAWWWTRRRIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0070713_1014990262	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPNVTNFQPVAWWWTRRRIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQN
Ga0070710_104291492	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GHKDGVSSMPNVTQFQPVAWWWTRRQIGRDLRQRHHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS*
Ga0070710_107300581	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EGHKDGVSSMPNVTQFQPVAWWWTRRQIGRDLRQRYNVLKDLPPKLLTLIRKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0070711_1002336403	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPNVTQFQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS*
Ga0070699_1003042422	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPNVTQFQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0066903_1016695612	3300005764	Tropical Forest Soil	MARIGQGLRGHYQVPRELPPKLLALLVKLDAIEGSYLFRYAPPLERRSVDESDWLPPRFVWQNDADLFAG*
Ga0066903_1023534653	3300005764	Tropical Forest Soil	MPNVTRWTRQIGRDLKERYHVLKDLPAKLLTLTRKLDAMEGNFLLRYAPPLERRGVEESDWLPPRFVWQRDADLFLG*
Ga0066903_1040187002	3300005764	Tropical Forest Soil	MPNVTNFQPVAWWWTRRRIGRVLRERYNVLKDLPPKLLMLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0066903_1049868512	3300005764	Tropical Forest Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYVPPLECRSVSESDWLPPRFVWQNDADLFAS*
Ga0066903_1057053641	3300005764	Tropical Forest Soil	WWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS*
Ga0066903_1090360201	3300005764	Tropical Forest Soil	MPNVTHFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESD
Ga0070717_114728341	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HEGHKDGVSSMPNVTNFQPVAWWWTRRRIGRVLRERYNVLKDLPPKLLMLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0066651_102828882	3300006031	Soil	MPNVTHFQPVAWWWARRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVDESDWLPPRFVWQNDADLFAS*
Ga0066652_1014879262	3300006046	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVDESDWLPPRFVWQNDADLFAS*
Ga0075026_1001056541	3300006057	Watersheds	MPNVTHFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0075019_110233381	3300006086	Watersheds	MPNVTHFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLRELVIQNLDRRLADRHFNRDMALVN
Ga0070712_1005200582	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPNVTQFQPVAWWWTRRQIGRDLRQRHHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS*
Ga0079222_107947382	3300006755	Agricultural Soil	MPNVTNFQPVAWWWTRRRIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0079221_101522933	3300006804	Agricultural Soil	MPNVTQFQPVAWWWTRRQIGRDLRQRYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0126374_103869013	3300009792	Tropical Forest Soil	MPNVTRWTRELKERYHVLKDLPAKLLTLIRKLDAMEGNFLLRYAPPLERRGVEESDWLPPRFVWQRDADLFLG*
Ga0126374_113548281	3300009792	Tropical Forest Soil	THFQPVAWWWTRRQIGRVLRERYDGLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFGR*
Ga0126373_113759492	3300010048	Tropical Forest Soil	MCGNRLKFPELNTTEGHKDGVSSMPNVTHFQPVAWWWTRRQIGRVLRERYNVLKGLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0134082_103301442	3300010303	Grasslands Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPQLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS*
Ga0126376_100399735	3300010359	Tropical Forest Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQDNADLFAS*
Ga0126378_112058802	3300010361	Tropical Forest Soil	MKGTKDGVSSMPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGNYLLRYAPPLERRSVSESDWLPPRFVWQNDADLFAS*
Ga0126378_117351661	3300010361	Tropical Forest Soil	MPNVTNFQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS*
Ga0126378_130165882	3300010361	Tropical Forest Soil	YHVLKDLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGETDWLPPRLVWQNDVDLFGD*
Ga0126379_119969192	3300010366	Tropical Forest Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVSESDWLPPKFVWQNDADLFAS*
Ga0126379_133541572	3300010366	Tropical Forest Soil	MPNVKQFQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGNYLLRYAPPLERRGVGESDWLPPRFVWQDDADLFAS*
Ga0126381_1031433891	3300010376	Tropical Forest Soil	MPNVTNFQPVAYWWTRRRIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPVGGRSVEESDWLPPRFVWQNDTDLFAS*
Ga0126383_101046964	3300010398	Tropical Forest Soil	MARIGHGLRTQHQAPKELPPKLLALLVKLDAIEGNYPLRYAPPLERRSVGESDWLPPRFVWQNDVDLFAS*
Ga0126383_132600051	3300010398	Tropical Forest Soil	TQFQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS*
Ga0126369_109485822	3300012971	Tropical Forest Soil	MPNVTHFQPVAWWWTRRQIGRVLRERYTVLKGLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS*
Ga0182041_107802501	3300016294	Soil	SMPNVTQFQPVAWFRERYNVLKDLPPRYLTLLKNLDAIEGKYLLRYGPPLERGSVGESDWLPPSFVWQYDADLFLG
Ga0182033_109132773	3300016319	Soil	VLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGESDWLPPRFVWQNDADLFAG
Ga0182033_119279961	3300016319	Soil	KDGVSSMPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPELLTLIRKLDAIEGKCLLRYAPPLERRSVSESESVSVSVSVSVSESDWLPPKFVWQNDADLFAS
Ga0182033_120445521	3300016319	Soil	LRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRTVSESDWLPPKFVWQNDADLFAT
Ga0182032_100266507	3300016357	Soil	MPNVTQFQPVAWFGERYNVLKDLPPRYLTLLRNLDAIEGKYLLRYGPPLERGSVGESDWLPPSFVWQYDADLFLG
Ga0182032_120264741	3300016357	Soil	MPNVTRWTRQIGRDLRERYHVLKDLPPKLLMLIRKLDAIEGKYLLRHAPPLERGSVGESDWLPPRFVWQNDADLFAS
Ga0182034_112399931	3300016371	Soil	VLVRIGKGLKDRYQLSKELPPKLLAVISKLDAIEGNYLPRYTPPLERRSVGESDWSPPRFVWQNDVDLFGG
Ga0182040_113843552	3300016387	Soil	GHKDGVSSMPNVTHFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0182037_105485581	3300016404	Soil	MPNVTRWTRQIGRDLRERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHASPLERGSVGESDWLPPRFVWQNDADLFAG
Ga0182037_108789301	3300016404	Soil	MPNVRQFQPVAWWWTRRQIGRDLRERYNVLKNLPPKLLTLIRTLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDA
Ga0182037_111876491	3300016404	Soil	SQRPDEGHKDGVSSMPNVTQFQPVARSRARYNALKDLPPRYLLRNLDAIEGKYLLLYGPPLERGSVGESDWLPPSFVWQYDADLFLG
Ga0182039_101198452	3300016422	Soil	MPIVTRWTRQIGRDLRERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGESDWLPPRFVWQNDADLFAS
Ga0182039_116555383	3300016422	Soil	MPNVTQFQPVAWFRERYNVLKDLPPRYLTLLRNLDAIEGKYLLRYGPPLERGSVGESDWLPPSFVWQYD
Ga0182038_100390488	3300016445	Soil	MPNVTQFQPVAWFGERYNVLKDLPPRYLTLLRNLDAIEGKYLLRYGPPLERGSVGESDWLPPSFVRQYDADLFLG
Ga0182038_104866442	3300016445	Soil	GRDLRERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGECDWLPPRFVWQNDADLFAS
Ga0066667_122998322	3300018433	Grasslands Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVDESDWLPPRFVWQNDADLFAS
Ga0066669_117977981	3300018482	Grasslands Soil	MPNVTQFQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVDESDWLPPRFVWQNDADLFAS
Ga0126371_116165722	3300021560	Tropical Forest Soil	MPNVTHFQPVAWWWTRRQIGRVLRERYNVLKGLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0126371_124269351	3300021560	Tropical Forest Soil	MERIGLGLRERYQFSKQLPPILLSLIRKLDALERNCLLRYAPPLERRSVAENDWLPPKFVWQRDANLFSG
Ga0207692_103126091	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPNVTQFQPVAWWWTRRQIGRDLRQRYNVLKDLPPKLLTLIRKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLFAS
Ga0207692_107342151	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPNVTNFQPVAWWWTRRRIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPR
Ga0207685_100883152	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MPNVTQFQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS
Ga0207693_108286052	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPNVTHFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0207663_108574921	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS
Ga0207700_106276832	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPNVTNFQPVAWWWTRRRIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLFAS
Ga0209473_11939982	3300026330	Soil	MPNVTHFQPVAWWWARRQIGRDLRQRYHVLKNLPPKLVTLIRKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS
Ga0208210_1008531	3300026683	Soil	VSSMPNVTNFQPVAWWWTRRRIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPVGRRSVEESD
Ga0208474_1035612	3300026700	Soil	MPNVTNFQPVAWWWTRRRIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPVGRRSVEESDWLPPR
Ga0208365_10223312	3300027070	Forest Soil	MPNVPQYQPVAWWWTRRQIGRDLRQRYYVLKNFPPKLLTLIRKLDAIEGKYLLRYAPPLKRRSVGESDWLPPRFVWQNDADLFAS
Ga0209465_102800472	3300027874	Tropical Forest Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESDWLPPKFVWQNDADLFAS
Ga0318516_101655392	3300031543	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESESDWLPPKFVWQNDADLFAS
Ga0318516_103437323	3300031543	Soil	MPNVTHFQPVAWWWTRRQIGRVLRERYNVLKGLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDAD
Ga0318516_108106202	3300031543	Soil	MANVTHFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0318534_106775762	3300031544	Soil	GHKDGVSSMPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRTVSESDWLPPKFVWQNDADLFAT
Ga0318538_102318822	3300031546	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRTVSESDWLPPKFVWQNDADLFAT
Ga0318515_101026003	3300031572	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESDWLPPKFVWQNDADLFS
Ga0310915_100536225	3300031573	Soil	MPNVTQFQPVAWFRERYNVLKDLPPRYLTLLRNLDAIEGKYLLRYGPPLERGSVGESDWLPPSFVWQYDADLFLG
Ga0310915_108505252	3300031573	Soil	HVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESDWLPPKFVWQNDADLFAS
Ga0307483_10271842	3300031590	Hardwood Forest Soil	MPNVTNFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPVGRRSVEESDWLPPRFVWQNDADLFAS
Ga0306917_104191462	3300031719	Soil	MPNVRQFQPVAWWWTRRQIGRDLRERYNVLKNLPPKLLTLIRTLDAIEGKYLLRYAPPLERRSVGESD
Ga0306917_109538871	3300031719	Soil	MPNVTRWTRQIGRDLRERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGECDWLPPRFVWQNDADLFAS
Ga0318493_104427661	3300031723	Soil	IGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVSESDWLPPRFVWQNDADLFAS
Ga0318492_103849992	3300031748	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRTVSESDWLPPKFVWQNDADLFAS
Ga0318494_104578952	3300031751	Soil	DGVSSMPNVTHFQPVAWWWTRRQIGRVLRERYNVLKGLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0307477_102303083	3300031753	Hardwood Forest Soil	MPNVTQFQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLCYAPPLERRSVGESDWLPPRFVWQNDADLFAS
Ga0307475_112767402	3300031754	Hardwood Forest Soil	IGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLECRSVGESDWLPPRFVWQNDADLFAS
Ga0318554_106452071	3300031765	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRTVSESDW
Ga0318521_108338681	3300031770	Soil	MPNVTHFQPVAWWWTRRQIGRILRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0318546_111851131	3300031771	Soil	MPNVTRWTRQIGRDLRERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGESDWLPPRFVWQNDADLFAG
Ga0318543_103815121	3300031777	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESDWLPPKFVWQND
Ga0318508_12095891	3300031780	Soil	MPNVTQFQPVAWFGERYNVLKDLPPRYLTLLRNLDAIEGKYLLRYGPPLERGSVGESDWLPPRFVWQNDADLFAG
Ga0318529_105593471	3300031792	Soil	MPNVTHFQPVAWWWTRRQIGRVLRERYNGLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0318557_103244672	3300031795	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVSESDWLPPRFVWQNDADLFAS
Ga0318557_103394232	3300031795	Soil	HEGHKYGVSSMPNVTHFQPVAWWWTRRQIGRVLRERYNVLKGLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0318576_106046221	3300031796	Soil	HKDGVSSMPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESESDWLPPKFVWQNDADLFAS
Ga0307473_102015562	3300031820	Hardwood Forest Soil	MPNVTHFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGHRSVEESDWLPPRFIWQNDADLFAS
Ga0307478_107024192	3300031823	Hardwood Forest Soil	MPNVTNFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0310917_100032592	3300031833	Soil	VSSMPNVTHFQPVAWWWTRRQIGRVLRERYNVLKGLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0310917_105353971	3300031833	Soil	MPNVTQFQPVAWFRERYNVLKDLPPRYLTLLRNLDAIEGKYLLRYGPPLERGSVGESDWLPPSFVWQYDAPGLDPNRTRPTRPVVAAGQTNAPL
Ga0310917_106630931	3300031833	Soil	ERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGESDWLPPRFVWQNDADLFA
Ga0310917_107689321	3300031833	Soil	MPNVTRWTRQIGRDLRERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGECDWLPPRFVWQN
Ga0318527_104436282	3300031859	Soil	EGHKDGVSSMPNVTHFQPVAWWWTRRQIGRVLRERYNVLKGLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0318551_101036773	3300031896	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESESDWL
Ga0318520_100510161	3300031897	Soil	VSSMPNVTQFQPVAWFRERYNVLKDLPPRYLTLLRNLDAIEGKYLLRYGPPLERGSVGESDWLPPSFVWQYDADLFLG
Ga0318520_106573402	3300031897	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESDWLPP
Ga0306923_114215961	3300031910	Soil	RDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRTVSESDWLPPKFVWQNDADLFAT
Ga0310916_108221571	3300031942	Soil	RDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESDWLPPKFVWQNDADLFAS
Ga0310916_112296481	3300031942	Soil	MPNVRQFQPVAWWWTRRQIGRVLRERYNVLKNLPPKLLTLIRTLDAIEGKYLLRYAPPLERRSVGESDWLP
Ga0310909_103523872	3300031947	Soil	MPNVTQFQPVAWFRERYNVLKDLPPRYLTLLRNLDAIEGKYLLRYGPPLERGSVGESDWLPPSFVRQYDADLFLG
Ga0310909_104751041	3300031947	Soil	ERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGECDWLPPRFVWQNDADLFA
Ga0310909_116587922	3300031947	Soil	MPNVTRWTRQIGRDLRERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGESDWLPP
Ga0306926_110622971	3300031954	Soil	MPNVTRWTRQIGRDLKERYHVLKDLPAKLLTLTRKLDAMEGNFLLRYAPPLERRGVEESDWLPPRFVWQRDADLFLG
Ga0306922_103209062	3300032001	Soil	MPNVTRWTRQIGRDLRERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGESDWLPPRFVWQNDADLFAS
Ga0318569_104322762	3300032010	Soil	CTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0318545_102181842	3300032042	Soil	MPNVTHFQPVAWWWTRRQIGRVLRERYNVLKGLPPKLLTLIGKLDAIEGKYLLHYTPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0318556_102912092	3300032043	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESESDWLPPKFVWQNDADLFAN
Ga0318556_104653551	3300032043	Soil	FQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0318533_103084322	3300032059	Soil	MPNVTQYQPVAWWWTRRQIGRNLRQRYHILKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVSESDWLPPRSVWQNDADLFAS
Ga0318533_104918961	3300032059	Soil	TQFQPVAWFGERYNVLKDLPPRYLLRNLDAIEGKYLLLYGPPLERGSVGESDWLPPSFVWQYDADLFLG
Ga0318533_105743441	3300032059	Soil	VSSMPNVRQFQPVAWWWTRRQIGRDLRERYNVLKNLPPKLLTLIRTLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS
Ga0318504_103023373	3300032063	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESDWLPPKFVWQNDADL
Ga0318553_105523872	3300032068	Soil	MPNVTQYQPVAWWWTRRQIGRDLRQRYHVLKNLPPKLLTLIRKLDAIEGKCLLRYAPPLERRSVSESERDWL
Ga0306924_102453313	3300032076	Soil	DLRERYHVLKDLPPKLLTLIRKLDAIEGKYLLRHAPPLERGSVGESDWLPPRFVWQNDADLFAG
Ga0318577_104692382	3300032091	Soil	MPNVAHFQPVAWWWTRRQIGRVLRERYNVLKGLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0307472_1004036613	3300032205	Hardwood Forest Soil	MPNVTHFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS
Ga0306920_1000194642	3300032261	Soil	VSSMPNVTHFQPVAWWWTRRQIGRVLRERYNVLKDLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS
Ga0306920_1027890862	3300032261	Soil	MPNVTQYQPVAWWWTRRQIGRNLRQRYHILKNLPPKLLTLIRKLDAIEGKYLLRYAPPLERRSVSESDWLPPRFVWQNDADLFAS
Ga0310914_106571282	3300033289	Soil	MPNVRQFQPVAWWWTRRQIGRDLRERYNVLKNLPPKLLTLIRTLDAIEGKYLLRYAPPLERRSVGESDWLPPRFVWQNDADLFAS
Ga0310914_106772062	3300033289	Soil	WWWTRRQIGRVLRERYNVLKGLPPKLLTLIGKLDAIEGKYLLHYAPPLGRRSVEESDWLPPRFVWQNDADLFAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062048

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences