Metagenome / Metatranscriptome Family F061737

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061737
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	100 residues
Representative Sequence	SGVIGFAPGTKVTMVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPKH
Number of Associated Samples	104
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.09 %
% of genes near scaffold ends (potentially truncated)	84.73 %
% of genes from short scaffolds (< 2000 bps)	80.15 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.076 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (41.221 % of family members)
Environment Ontology (ENVO)	Unclassified (54.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.885 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.77% β-sheet: 10.00% Coil/Unstructured: 49.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF04773	FecR	8.40
PF01575	MaoC_dehydratas	3.82
PF14305	ATPgrasp_TupA	3.05
PF01183	Glyco_hydro_25	2.29
PF13528	Glyco_trans_1_3	1.53
PF02563	Poly_export	0.76
PF00535	Glycos_transf_2	0.76
PF13807	GNVR	0.76
PF07690	MFS_1	0.76
PF01479	S4	0.76
PF14907	NTP_transf_5	0.76
PF01177	Asp_Glu_race	0.76
PF01179	Cu_amine_oxid	0.76
PF10082	BBP2_2	0.76
PF01872	RibD_C	0.76
PF00892	EamA	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	2.29
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.76
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.76
COG3733	Cu2+-containing amine oxidase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.08 %
Unclassified	root	N/A	9.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.08 %
Unclassified	root	N/A	9.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.08 %
Unclassified	root	N/A	9.92 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	82.44 %
Unclassified	root	N/A	9.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	82.44 %
Unclassified	root	N/A	9.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	64.12 %
Unclassified	root	N/A	9.92 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.29 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.12 %
Unclassified	root	N/A	9.92 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.29 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.76 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.12 %
Unclassified	root	N/A	9.92 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2.29 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.76 %
Herbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.12 %
Unclassified	root	N/A	9.92 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2.29 %
Oscillatoriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae	0.76 %
unclassified Herbaspirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.12 %
Unclassified	root	N/A	9.92 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.53 %
Oscillatoria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria	0.76 %
Herbaspirillum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp.	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.12 %
Unclassified	root	N/A	9.92 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.53 %
unclassified Oscillatoria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → unclassified Oscillatoria	0.76 %
Herbaspirillum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp.	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	64.12 %
Unclassified	root	N/A	9.92 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.53 %
Oscillatoria sp. PCC 10802	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → unclassified Oscillatoria → Oscillatoria sp. PCC 10802	0.76 %
Herbaspirillum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp.	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17098872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5502	Open in IMG/M
2228664022\|INPgaii200_c1032644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1870	Open in IMG/M
3300000890\|JGI11643J12802_10365614	Not Available	567	Open in IMG/M
3300002899\|JGIcombinedJ43975_10034085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	835	Open in IMG/M
3300005172\|Ga0066683_10460617	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	778	Open in IMG/M
3300005179\|Ga0066684_10712954	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300005180\|Ga0066685_10179841	All Organisms → cellular organisms → Bacteria → Proteobacteria	1446	Open in IMG/M
3300005187\|Ga0066675_10031425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3118	Open in IMG/M
3300005187\|Ga0066675_10272369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1216	Open in IMG/M
3300005187\|Ga0066675_10326418	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1116	Open in IMG/M
3300005187\|Ga0066675_11250971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300005328\|Ga0070676_10017033	All Organisms → cellular organisms → Bacteria → Proteobacteria	4018	Open in IMG/M
3300005334\|Ga0068869_100152198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1795	Open in IMG/M
3300005339\|Ga0070660_100250893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1443	Open in IMG/M
3300005451\|Ga0066681_10032541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2763	Open in IMG/M
3300005451\|Ga0066681_10559078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300005451\|Ga0066681_10853790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300005457\|Ga0070662_100001891	All Organisms → cellular organisms → Bacteria	12835	Open in IMG/M
3300005518\|Ga0070699_100354724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1322	Open in IMG/M
3300005536\|Ga0070697_100978859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300005539\|Ga0068853_100569397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1074	Open in IMG/M
3300005540\|Ga0066697_10125048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1509	Open in IMG/M
3300005540\|Ga0066697_10272775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	999	Open in IMG/M
3300005553\|Ga0066695_10783277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300005554\|Ga0066661_10320265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300005556\|Ga0066707_10010832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → unclassified Oscillatoria → Oscillatoria sp. PCC 10802	4477	Open in IMG/M
3300005569\|Ga0066705_10446790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	810	Open in IMG/M
3300005574\|Ga0066694_10220738	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	899	Open in IMG/M
3300005576\|Ga0066708_10033400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2767	Open in IMG/M
3300005576\|Ga0066708_10597273	Not Available	707	Open in IMG/M
3300005587\|Ga0066654_10538158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300005598\|Ga0066706_10202961	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1523	Open in IMG/M
3300005598\|Ga0066706_10384129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1117	Open in IMG/M
3300005598\|Ga0066706_10477108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	994	Open in IMG/M
3300006031\|Ga0066651_10512893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300006032\|Ga0066696_10029212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2928	Open in IMG/M
3300006034\|Ga0066656_10014406	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4086	Open in IMG/M
3300006046\|Ga0066652_100245340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1565	Open in IMG/M
3300006046\|Ga0066652_101638614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300006046\|Ga0066652_102037258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300006791\|Ga0066653_10031133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp.	2102	Open in IMG/M
3300006791\|Ga0066653_10414941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300006796\|Ga0066665_10379342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1162	Open in IMG/M
3300006796\|Ga0066665_10592531	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	893	Open in IMG/M
3300006797\|Ga0066659_11103297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300007255\|Ga0099791_10301734	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	764	Open in IMG/M
3300007258\|Ga0099793_10271010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	822	Open in IMG/M
3300009012\|Ga0066710_103143657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300009092\|Ga0105250_10068364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1434	Open in IMG/M
3300009137\|Ga0066709_100731749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1426	Open in IMG/M
3300009137\|Ga0066709_101780195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	866	Open in IMG/M
3300009137\|Ga0066709_102120423	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300009137\|Ga0066709_103892598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300010321\|Ga0134067_10437541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300010322\|Ga0134084_10141193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300010322\|Ga0134084_10458682	Not Available	509	Open in IMG/M
3300010329\|Ga0134111_10172362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	865	Open in IMG/M
3300010333\|Ga0134080_10219598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	829	Open in IMG/M
3300010335\|Ga0134063_10061977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1651	Open in IMG/M
3300010373\|Ga0134128_11531962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	734	Open in IMG/M
3300010396\|Ga0134126_11511011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300011270\|Ga0137391_10636769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	891	Open in IMG/M
3300012198\|Ga0137364_11064254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	610	Open in IMG/M
3300012198\|Ga0137364_11079623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	605	Open in IMG/M
3300012199\|Ga0137383_10236110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1340	Open in IMG/M
3300012200\|Ga0137382_10187354	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1418	Open in IMG/M
3300012201\|Ga0137365_11317950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300012202\|Ga0137363_10154023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1808	Open in IMG/M
3300012204\|Ga0137374_10722898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300012204\|Ga0137374_11257308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300012207\|Ga0137381_10979269	Not Available	730	Open in IMG/M
3300012210\|Ga0137378_10075016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	3075	Open in IMG/M
3300012285\|Ga0137370_10559026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300012349\|Ga0137387_11098087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300012349\|Ga0137387_11336767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300012358\|Ga0137368_10853704	Not Available	559	Open in IMG/M
3300012361\|Ga0137360_11281333	Not Available	633	Open in IMG/M
3300012362\|Ga0137361_10499819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1117	Open in IMG/M
3300012582\|Ga0137358_10487416	Not Available	831	Open in IMG/M
3300012923\|Ga0137359_10911655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300012929\|Ga0137404_10121980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2132	Open in IMG/M
3300012972\|Ga0134077_10456746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300013297\|Ga0157378_11750975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300014157\|Ga0134078_10445054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300017654\|Ga0134069_1024202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1836	Open in IMG/M
3300017657\|Ga0134074_1336322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300017659\|Ga0134083_10257957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	731	Open in IMG/M
3300018028\|Ga0184608_10007620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3586	Open in IMG/M
3300018051\|Ga0184620_10009239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2190	Open in IMG/M
3300018433\|Ga0066667_10332842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1198	Open in IMG/M
3300018482\|Ga0066669_10347745	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1230	Open in IMG/M
3300019878\|Ga0193715_1100107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300019886\|Ga0193727_1004751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5541	Open in IMG/M
3300019886\|Ga0193727_1159785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300021344\|Ga0193719_10251766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	746	Open in IMG/M
3300022534\|Ga0224452_1218165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300025271\|Ga0207666_1013253	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1156	Open in IMG/M
3300025315\|Ga0207697_10039482	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1936	Open in IMG/M
3300025923\|Ga0207681_10646617	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300026296\|Ga0209235_1166016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300026301\|Ga0209238_1166193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300026306\|Ga0209468_1028393	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300026306\|Ga0209468_1131151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	717	Open in IMG/M
3300026326\|Ga0209801_1133536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1057	Open in IMG/M
3300026332\|Ga0209803_1162281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	855	Open in IMG/M
3300026490\|Ga0257153_1008526	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300026528\|Ga0209378_1079187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1490	Open in IMG/M
3300026536\|Ga0209058_1128174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1240	Open in IMG/M
3300026537\|Ga0209157_1044985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2394	Open in IMG/M
3300026537\|Ga0209157_1301305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300026540\|Ga0209376_1033187	All Organisms → cellular organisms → Bacteria	3197	Open in IMG/M
3300026547\|Ga0209156_10002435	All Organisms → cellular organisms → Bacteria	14551	Open in IMG/M
3300026547\|Ga0209156_10021134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3895	Open in IMG/M
3300026547\|Ga0209156_10174500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1034	Open in IMG/M
3300026548\|Ga0209161_10059053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2466	Open in IMG/M
3300026548\|Ga0209161_10216515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1040	Open in IMG/M
3300026550\|Ga0209474_10004774	All Organisms → cellular organisms → Bacteria	11648	Open in IMG/M
3300026552\|Ga0209577_10145419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1870	Open in IMG/M
3300026820\|Ga0207603_105366	Not Available	561	Open in IMG/M
3300027748\|Ga0209689_1418967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300027846\|Ga0209180_10116677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1530	Open in IMG/M
3300028711\|Ga0307293_10078489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1041	Open in IMG/M
3300028793\|Ga0307299_10260884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	651	Open in IMG/M
3300028814\|Ga0307302_10493920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300028819\|Ga0307296_10099605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1557	Open in IMG/M
3300028828\|Ga0307312_10087201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1918	Open in IMG/M
3300030917\|Ga0075382_11298097	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.37%
Host-Associated	Host-Associated	7.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.08%
Plants	Host-Associated → Plants	7.63%
Aquatic	Environmental → Aquatic	2.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.05%
Sediment	Environmental → Aquatic → Sediment	2.29%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.29%
Loam	Environmental → Terrestrial → Soil → Loam	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.53%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	48.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	41.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.53%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026820	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-A (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02874460	2088090014	Soil	VIGFAPGTKVTLVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH
INPgaii200_10326442	2228664022	Soil	LVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH
JGI11643J12802_103656142	3300000890	Soil	GTKVTLVEQADSVSTVTDGAYQFKVLSSQLTNDLDLAASVATADYTAQAQIAELVAKSAQEYSQQQRDAFIASEKEKAQKKTGKKTPRRASPNPKR*
JGIcombinedJ43975_100340853	3300002899	Soil	ASLPIDSGVIGFAPGTKVTLVEQADSVSTVTDGEYQFKVPSSQLTNDLDLAASVATADYTAQAQIAELVAKSAQEYSQQQRDAFIASEKEKAQKKTGKKTPRRASPTPKR*
JGI25390J43892_101574941	3300002911	Grasslands Soil	QYQFEVQSSQLTNDLDIAASIAKADYTAQAQITELTAKWAQEYSQQQRDAFIASEKGRAQKKTRPRVTPRATPKH*
Ga0066683_104606172	3300005172	Soil	LDQGDSASTVTDGQYQFTVPSFQLTNDLDIAASVAKSDYAAQAQLADLTAKWTQEYNQQQRDAFIASEKEREQKKTRSRTARRTPTPAQHR*
Ga0066684_107129542	3300005179	Soil	TDGQYQFEVQSSQLTNDLDIAASIAKADYTAQAHLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRATPRATPKH*
Ga0066685_101798412	3300005180	Soil	SGVIGFAPGTKVTMVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPKH*
Ga0066675_100314254	3300005187	Soil	DSGSTVTDGQYQFTVQSSYLTNDLDIAARVATTDYAAQARIAEQIGKSIQEYDQQQRDVLVASEKEKAHKKTRPRGAPRAPTPAKHK*
Ga0066675_102723691	3300005187	Soil	VGQGASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYITQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPKH*
Ga0066675_103264182	3300005187	Soil	VGQGASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYTAQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKPRPRASPRATPKH*
Ga0066675_112509711	3300005187	Soil	KIDSGVIGFAPGTKVALLDQGDSASTVTDGQYQFTVPSSQLTNDLDIAASVAKSDYAAQAQLADLTAKWAREYNQQQRDAFIASEKEKEQKKTRPGTARRTPTPTQRR*
Ga0070676_100170335	3300005328	Miscanthus Rhizosphere	VFFLLQRASLPIDSGVIGFAPGTKVTLVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH*
Ga0068869_1001521981	3300005334	Miscanthus Rhizosphere	LVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH*
Ga0070660_1002508933	3300005339	Corn Rhizosphere	VFFLLQRASLPIDSGVIGFAPGTKVTLVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRHPSPTPRR*
Ga0066681_100325413	3300005451	Soil	LLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLAELTAKWVQEYNQRQREAFITSEKEKAQKKPRPRATPRASNR*
Ga0066681_105590782	3300005451	Soil	RTDSGVIGFAPGTKVTLIEQGNSASKVTDGQYQFEVSPSQLTNDLDIAASVAQSDYAEQVRITELTGKWAQEYARQQREAFIASEKEKAQKKTRPRPTPQAPR*
Ga0066681_108537901	3300005451	Soil	VGQGASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYTAQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRASPRATPKH*
Ga0070662_10000189110	3300005457	Corn Rhizosphere	VIGFAPGTKVTLVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH*
Ga0070699_1003547242	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RIESGVIGFAPGTKVTLLDQGDSASKVTDGQYQFEVPPSQLTNDLDIAASVAQSDYAEQARITELTGKWAQEYAQQQRDALAASEKERAQEKTRPRPTPRAPR*
Ga0070697_1009788591	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GDSASTVTDGQYQFTVPSSQLTNDLDLAASIAKSDYTAQAQLSELTAKWAQEYAQQQREAFIASEKEKAQKKTRPRPTPRAPR*
Ga0068853_1005693972	3300005539	Corn Rhizosphere	LVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRHPSPTPRR*
Ga0066697_101250481	3300005540	Soil	GDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRASPRAAPKH*
Ga0066697_102727751	3300005540	Soil	GFAPGTKVTLLNQNDSGSTVTDGQYQFTVQSSYLTNDLDIAARVATTDYAAQARIAEQIGKSIQEYDQQQRDVLVASEKEKAHKKTRPRGAPRAPTPAKHK*
Ga0066695_107832771	3300005553	Soil	LVGQGASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYTAQAQLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRATPRATPKH*
Ga0066661_103202652	3300005554	Soil	VTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLGELTAKWVQEYNQRQREAFIASEKEKAQKKPRSRATPRASNR*
Ga0066707_100108326	3300005556	Soil	VGQGASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYTAQAQLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRATPRATPKH*
Ga0066705_104467902	3300005569	Soil	IDSGVIGFAPGTKVTLLDQGNSASTVTDGQYQFAVPLSQLTNDLDIAADVAKSDYAAQAQLVELTAKWVQEYNQRQREMFIASEKQKAQKKPRPRATPRAPNR*
Ga0066694_102207382	3300005574	Soil	LERASLRIDSGVIGFAPGTKVTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLAELTAKWVQEYNQRQREAFITSEKEKAQKKPRPRATPRASNR*
Ga0066708_100334003	3300005576	Soil	LVGQGASASTVTDGQYQFEVQSSQLTNDLDIAANIVKADYTAQAQLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRAAPRAPSPPQRR*
Ga0066708_105972732	3300005576	Soil	IESGVIGFAPGTKVTLVGQGASASTVTDGQYQFEVQSSQLTNDLDIAANIAKADYTAQAQLTELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRAAPRAPSPPQRR*
Ga0066654_105381581	3300005587	Soil	SLPIDSGVIGFAPGTKVTMVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRASPRAAPKH*
Ga0066706_102029611	3300005598	Soil	EGTFFLLERASLPIDSGVIGFAPGTKVTLVGQGASASTVTDGQYQFEVQSSQLTNDLDIAANIAKADYTAQAQLTELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRAAPRAPSPPQRR
Ga0066706_103841292	3300005598	Soil	STVTDGQYQFTVQSSYLTNDLDIAARVATTDYAAQARIAEQIGKSIQEYDQQQRDVLVASEKEKAHKKTRPRGAPRAPTPAKHK*
Ga0066706_104771083	3300005598	Soil	LDQGDSASTVTDGQYQFTVPSSRLTNDLDIAESVAKSDYAAQAQLADLTAKWTQEYNQQQRDAFIASEKEKEQKKTRSRTPRRTPTPTQRR*
Ga0066651_105128931	3300006031	Soil	LLDQGDSASTVTDGQYQFTVPSSRLTNDLDIAESVAKSDYAAQAQLADLTAKWTQEYNQQQRDAFIASEKEREQKKTRSRTARRTPTPAQRR*
Ga0066696_100292124	3300006032	Soil	LERASLPIESGVIGFAPGTKVTLVGQGASASTVTDGQYQFEVQSSQLTNDLDIAANIVKADYTAQAQLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRAAPRAPSPPQRR*
Ga0066656_100144061	3300006034	Soil	QGDSASTVTDGQYQFTVPSSQLTNDLDIAASVAKSDYAAQAQLADLTAKWAREYNQQQRDAFIASEKEKEQKKTRPRTARRTPTPTQRR*
Ga0066652_1002453404	3300006046	Soil	KIDSGVIGFAPGTKVALLDQGNSASTVTDGRYRFTVPSSQLTNDLDIAASVAQSDYAEQVRITELTGKWAQEYARQQREAFIASEKEKAQKKTRPRPTPQAPR*
Ga0066652_1016386142	3300006046	Soil	APEGTFFLLQRASLPIDSGVIGFAPGTKVTMVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPRH*
Ga0066652_1020372582	3300006046	Soil	PGTKVALLDQGDSASTVTDGQYQFTVPSSRLTNDLDIAESVAKSDYAAQAQLADLTAKWTQEYNQQQRDAFIASEKEKEQKKTRSRTARRTPTPAQRR*
Ga0066653_100311333	3300006791	Soil	VIGFAPGTKVTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLAELTAKWVQEYNQRQREAFITSEKEKAQKKPRPRATPRASNR*
Ga0066653_104149411	3300006791	Soil	RASVPIDSGVIGFAPGTKVTLLEQADSASTVTDGQYQFKVQSSQLTNDLDIAAGIAKSDYTAQAQLAELTAKWAREYAQQQRDALAASEKEKAQKAQKKTPPHARHP*
Ga0066665_103793422	3300006796	Soil	IDSGVIGFAPGTKVTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLGELTAKWVQEYNQRQREAFIASEKEKAQKKPRPRATPRASNR*
Ga0066665_105925312	3300006796	Soil	GDSASTVTDGQYQFTVPSSQLTNDLDIAASVAKSDYAAQAQLADLTAKWTQEYNQQQRDAFIASEKEREQKKTRSRTARRTPTPAQHR*
Ga0066659_111032972	3300006797	Soil	ASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLGELTAKWVQEYNQRQREAFIASEKEKAQKKPRSRATPRASNR*
Ga0099791_103017342	3300007255	Vadose Zone Soil	IGFAPGTKVTMVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRASPKATPKH*
Ga0099793_102710102	3300007258	Vadose Zone Soil	VTDGQYQFTVQSSQLTNDLDLAASVAKADYTAQAQITELTAKWAQEYSQQQRDAFIASEKEKGQKKTRPRASPRATPKH*
Ga0066710_1031436571	3300009012	Grasslands Soil	LQRTSLPIDSGVIGFAPGTKVTLVEETNSVSTVTDGEYQFKVPSSQLTNDLDLAASVASADYAAQAQIAELTAKRAQEYSQQQRDAFIASEKEKAQKKTGKKTSRRPSPTPKR
Ga0105250_100683642	3300009092	Switchgrass Rhizosphere	APQGVFFLLQRASLPIDSGVIGFAPGTKVTLVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH*
Ga0066709_1007317493	3300009137	Grasslands Soil	LVGQGASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYTAQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKPRPRASPRATPKH*
Ga0066709_1017801952	3300009137	Grasslands Soil	TFFLLERASLPIESGVIGFAPGTKVTLVGQGASASTVTDGQYQFEVQSSQLTNDLDIAANIAKADYTAQAQLTELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRAAPRAPSPPQRR*
Ga0066709_1021204232	3300009137	Grasslands Soil	VGQGASASTVTDGQYQFEVQSSQLTNDLDIAANIVKADYTAQAQLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRAAPRAPSPPQRR*
Ga0066709_1038925982	3300009137	Grasslands Soil	QGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRASPKATPKH*
Ga0134067_104375412	3300010321	Grasslands Soil	DGQYQFEVRSSQLTNDLDIAASIAKADYTAQAQLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRATPRATPKH*
Ga0134084_101411931	3300010322	Grasslands Soil	RASLKTDSGVIGFAPGTKVTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLAELTAKWVQEYNQRQREAFITSEKEKAQKKPRPRATPRASNR*
Ga0134084_104586822	3300010322	Grasslands Soil	NKNDSGSTVTDGQYQFTVQASYLTNDLDIAASVAKSDYAAQAKIAEQIGKSIQEYDQQQRDVLVASEKEKAQKKTGPRAARRAPSPAKHK*
Ga0134111_101723621	3300010329	Grasslands Soil	APEGTFFLLQRASLPIDSGVIGFAPGTKVTMVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPKH*
Ga0134080_102195981	3300010333	Grasslands Soil	GVIGFAPGTKVTLLEQVDSASTVVTDGQYQFKVQSSQLTNDLDIAASIAKSDYTAQAQLAELTAKWAREYAQQQRDALAASEKEKAQKAQKKTPPHARHP*
Ga0134063_100619773	3300010335	Grasslands Soil	TDGQYQFEVQSSQLTNDLDIAANIVKADYTAQAQLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRAAPRAPSPPQRR*
Ga0134128_115319622	3300010373	Terrestrial Soil	ASLPIDSGVIGFAPGTKVTLVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH*
Ga0134126_115110112	3300010396	Terrestrial Soil	LAPQGVFFLLQRASLPIDSGVIGFAPGTKVTLVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH*
Ga0137391_106367691	3300011270	Vadose Zone Soil	RASLRIDSGVIDFAPGTKVTLLDQGNSASTVTDGQYQFAVPASQLTNDLDIAAGAAKSDYAAQAQLAELTAKWLQEYNQRQREAFIASEKEKAQKKPRPRATPRAPNR*
Ga0137364_106598291	3300012198	Vadose Zone Soil	FVSTVTDGEYPCKVPSSQLTNDLDVAESVAKADYTAQAQIAEVAAKWAQQYSQQQRDAFIASEKEKAAKKTGKKTPRRPSPTPKR*
Ga0137364_110642542	3300012198	Vadose Zone Soil	GFAPGTKVTLLEQADSASTVTDGQYQFKVQSSQLTNDLDIAASIAKSDYTAQAQLAELTAKWAREYAQQQRDALAASEKEKAQKAQKKTPPHARHP*
Ga0137364_110796232	3300012198	Vadose Zone Soil	GFAPGTKVTLLEQADSASTVTDGQYQFKVQSSQLTNDLDIAASIAKSDYTAQAQLAELTAKWAREYAQQQRDALAASEREKAQKAQKKTPPHSRHP*
Ga0137383_102361101	3300012199	Vadose Zone Soil	TFFLLERASLPLESGVIGFAPGTKVTLVGQGASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYTAQAQLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRATPRATPKH*
Ga0137382_101873543	3300012200	Vadose Zone Soil	LVGQGASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYITQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPKH*
Ga0137365_113179502	3300012201	Vadose Zone Soil	FLLERASLRTDSGVIGFTPGTKVTLVDQGASASTVTDGQYQFTVPSSQLTNDLDLAASVAQSDYAEQVRITELTGKWAQEYAQQQREALAAWEKAQKRPTPRAPK*
Ga0137363_101540235	3300012202	Vadose Zone Soil	TYFLLQRASLTTNSGVVGFAPGTKVTLLEQGNSASKVTDGQYQFEVQPSQLTNDLDIAASVAQSDYTTQARIAELTGKWIQEFDQQQRDALSASEKEKAQKKTGKRTAPRAPTPPGHR*
Ga0137374_107228981	3300012204	Vadose Zone Soil	FFLLQRTSLPIDSGVIGFAPGTKVTLVEQADSVSTVTDGEYQFKVPSSQLTNDLDLAASVAKADYTAQAQIAELAAKWAQEYNQRQRDAFTASEKEKAEKKTGKKTPRRPSPTPKR*
Ga0137374_112573082	3300012204	Vadose Zone Soil	QRVSLKTDSGVIGFAPGIKVTMIEQGDPMSTVSDGQYQFTVASSQLTNDLDIADNVAKYDYAAQAQIAELTAKRAQEYSQQQRDALIASEKEKEQKKTGKKTARRPSPTPKR*
Ga0137381_109792691	3300012207	Vadose Zone Soil	PGTKVTLLDQVDSTNTVTDGRYQYHVPASKLTNDLDIAASIAKTDYTAQAQLAESTAKDADEYALQQRDALVGSEKEKAQKKTRPRAAPRAATPVGRR*
Ga0137378_100750163	3300012210	Vadose Zone Soil	PGTKVTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLAELTAKWVQEYNQRQRETFIASEKEKAQKKPRPRATPRAPNR*
Ga0137370_105590261	3300012285	Vadose Zone Soil	IDSGVIGFAPGTKVTLVGQGASASTVTDGQYQFEVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPKH*
Ga0137387_110980871	3300012349	Vadose Zone Soil	LLQRTSLPIDSGVIGFAPGTKVTLVEQTDSVSTVTDGEYQFKVPSSQLTNDLDLAASVASADYAALAQIAELTAKWAQQYSQQQRDAFIASEKEKAQKKTGKKTSRRPSPTPKR*
Ga0137387_113367672	3300012349	Vadose Zone Soil	ERASLRIDSGVIGFAPGTKVTLVDQGASASTVTDGQYQFTVPSSQLTNDLDLAASVAQSDYAEQVRITELTGKLAQEYARQQREAFIASEKERAQKKTRPRPTPQAPR*
Ga0137368_108537041	3300012358	Vadose Zone Soil	IGFAPGTKVTLVEQTDSVSTVTDGEYQFKVPSSQLTNDLDLAASVASADYAAQAQIAEFTAKRAQEYSQQQRDAFIASEKEKEQKKSGKKTARRPSPTPKR*
Ga0137360_112813332	3300012361	Vadose Zone Soil	GFAPGTKVALLDQGDSASTVTDGRYRFTVPSSQLTNDLDIAASVAQSDYAEQVRITELTGKWAQEYAQQQRDALAAWEKAQKRPTPRAPK*
Ga0137361_104998192	3300012362	Vadose Zone Soil	LPIDSGVIGFAPGTKVTMVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRASPRATPKH*
Ga0137358_104874161	3300012582	Vadose Zone Soil	VIGFAPGTKVTLLDQVDSANTVTDGRYQFHVPASQLTNDLDIAASIAKSDYTAQAQLAELTAKDADEYALQQRDALVGSEKAKAQKKTRPRAAPRAPTPVGRR*
Ga0137359_109116552	3300012923	Vadose Zone Soil	GTFFLLQRASLPIDSGVIGFAPGTKVTLLDQVDSANTVTDGRYQFHVPASQLTNDLDIAASIAKSDYTAQAQLAELTAKDADEYALQQRDALVGSEKAKAQKKTRPRAAPRAPTPVGRR*
Ga0137404_101219801	3300012929	Vadose Zone Soil	RASLKIDSGVVGFAPGTKVALLDHGDSASTVTDGQYQFTVLSSQLTNDLDIAASVAKSDYAAQAQLADLTAKWTQEYNQQQRDAFIASEKEREQKKTRSRTARRTPTPAQHR*
Ga0134077_104567461	3300012972	Grasslands Soil	TYFLLERASLRIDSGVIGFAPGTKVTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLAELTAKWVQEYNQRQREAFIASEKEKAQKKPRPRATPRASNR*
Ga0157378_117509751	3300013297	Miscanthus Rhizosphere	RTDSGVIGFAPGTKVTLVDQGDSASTVTDGQYQFTVPSSQLTNDLDLAASIAKSDYTAQAQLSELTAKWAQEYAQQQREAFIASEKEKAQKKTRPRPTPRAPR*
Ga0134078_104450541	3300014157	Grasslands Soil	VTDGQYQFTVQASYLTNDLDIAASVAKSDYAAQAKIAEQIGKSIQEYDQQQRDVLVASEKEKAQKKTGPRAARRAPSPAKHK*
Ga0134069_10242023	3300017654	Grasslands Soil	DSGVIGFAPGTKVTMVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRASPKATPKH
Ga0134074_13363222	3300017657	Grasslands Soil	RASLPIESGVIGFAPGTKVTLIGQGASASTVTDGQYQFEVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPRH
Ga0134083_102579572	3300017659	Grasslands Soil	SASTVTDGQYQFTVPSSRLTNDLDIAESVAKSDYAAQAQLADLTAKWTQEYNQQQRDAFIASEKEREQKKTRSRTARRTPTPAQHR
Ga0184608_100076204	3300018028	Groundwater Sediment	LLERVDSASTVTDGQYQFKVQSSQLTNDLDIAAGIAKSDYTAQAQLAELTAKWAHEYAQQQRDALAASEKEKAQKAQKKTPPRVRHRQP
Ga0184620_100092392	3300018051	Groundwater Sediment	LLEQVDSASTVTDGQYQFKVQSSQLTNDLDIAAGIAKSDYTAQAQLAELTAKWAHEYAQQQRDALAASEKEKAQKAQKKTPPRVRHRQP
Ga0066667_103328421	3300018433	Grasslands Soil	GASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYTAQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKPRPRASPRATPKH
Ga0066669_103477452	3300018482	Grasslands Soil	LVERASLPIESGVIGFAPGTKVTLLNQNDSGSTVTDGQYQFTVQSSYLTNDLDIAARVATTDYAAQARIAEQIGKSIQEYDQQQRDVLVASEKEKAHKKTRPRGAPRAPTPAKHK
Ga0193715_11001071	3300019878	Soil	QGDSESTVTDGQYQFKVPSSQLTNDLDLAASAAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRASPRATPKH
Ga0193727_10047512	3300019886	Soil	VIGFAPGTKVTLIEQADSVSTVTDGEYQFKVPSSQLTNDLDLGASVANADYTAQAQIAELTARRAQAYSQQQRDAFIASENEKAGKKTGKKTPRRPSPTPKR
Ga0193727_11597851	3300019886	Soil	TFFLLQRASLPIDSGVIGFPPGTKVTLLEQVDSASTVTDGQYQFRVQSSQLTNDLDIAAGIAKSDYTAQAQLAELTAKWAHEYAQQQRDALAASEREKAQKAQKKTPPRPRHR
Ga0193719_102517661	3300021344	Soil	IGFAPGTKVTMVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRASPKATPKH
Ga0224452_12181651	3300022534	Groundwater Sediment	VVGFPPGTKVTLVEQADSGSTVTDGEYQFKVPSSQLTNDLDLAASVAKADYTAQTQIAELAAKWAQEYNQRQRDAFTASEKEKAQKKTGQKTPRRTASPTPKR
Ga0207666_10132532	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	VFFLLQRASLPIDSGVIGFAPGTKVTLVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH
Ga0207697_100394822	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	EEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVATEDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRHPSPTPRR
Ga0207681_106466172	3300025923	Switchgrass Rhizosphere	VFFLLQRASLPIDSGVIGFAPGTKVTLVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRHPSPTPRR
Ga0207704_114995592	3300025938	Miscanthus Rhizosphere	NSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH
Ga0209235_11660162	3300026296	Grasslands Soil	LLERASLRIDSGVIGFAPGTKVTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLGELTAKWVQEYNQRQREAFIASEKEKAQKKPRSRATPRASNR
Ga0209238_11661931	3300026301	Grasslands Soil	RASLRIDSGVIGFAPGTKVTLLDQGNSASTVTDGQYQFAVPLSQLTNDLDIAADVAKSDYAAQAQLAELTAKWVQEYNQRQRETFIASEKQKAQKKPRPRATPRAPNR
Ga0209468_10283931	3300026306	Soil	VTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLAELTAKWVQEYNQRQREAFITSEKEKAQKKPRPRATPRASNR
Ga0209468_11311511	3300026306	Soil	LLEQADSASTVTDGQYQFKVQSSQLTNDLDIAAGIAKSDYTAQAQLAELTAKWAREYAQQQRDALAASEKEKAQKAQKKTPPHARHP
Ga0209801_11335361	3300026326	Soil	TSQPRLAPEGTFFLLERASLPIESGVIGFAPGTKVTLVGQGASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYTAQAQLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRATPRATPKH
Ga0209803_11622812	3300026332	Soil	FAPGTKVTLLDQGNSASTVTDGQYQFAVPLSQLTNDLDIAADVAKSDYAAQAQLVELTAKWVQEYNQRQREMFIASEKQKAQKKPRPRATPRAPNR
Ga0257153_10085262	3300026490	Soil	KVTLLEQGDSTSKVTDGQYHFEVPSSQLTNDLDIAASVAQSDYAEQARITELTGKWAQEYAQQQRDALAASEKERAQKNTRPRPTPQAPK
Ga0209378_10791871	3300026528	Soil	TKVTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLAELTAKWVQEYNQRQRETFIASEKEKAQKKPRPRATPRAPNR
Ga0209058_11281742	3300026536	Soil	FAPGTKVTLVGQGASASTVTDGQYQFEVQSSQLTNDLDIAANIVKADYTAQAQLAELTAKGAHEYALQQRDALVASEKERAQKKTRPRAAPRAPSPPQRR
Ga0209157_10449853	3300026537	Soil	ASLKIDSGVIGFAPGTKVALLDQGDSASTVTDGQYQFTVPSSQLTNDLDIAASVAKSDYAAQAQLADLTAKWAREYNQQQRDAFIASEKEKEQKKTRPGTARRTPTPTQRR
Ga0209157_13013051	3300026537	Soil	TDEQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPKH
Ga0209376_10331871	3300026540	Soil	IDSGVIGFAPGTKVTMVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPKH
Ga0209156_100024351	3300026547	Soil	PVTSQPRLAPEGTFFLLERASLPIESGVIGFAPGTKVTLIGQGASASTVTDGQYQFEVQSSQLTNDLDIAASIAKADYTAQAHLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRATPRATPKH
Ga0209156_100211342	3300026547	Soil	MVEQGDSASTVTDGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRASPRAAPKH
Ga0209156_101745001	3300026547	Soil	DSASTVTNGQYQFTVQSSQLTNDLDLAASVAKADYTTQAQITELTAKWAQEYSQQQRDAFIASEKGKAQKKTRPRATPRATPKH
Ga0209161_100590531	3300026548	Soil	LLERASLRIDSGVIGFAPGTKVTLLDQGNSASTVTDGQYQFAVPPSQLTNDLDIAAGVAKSDYAAQAQLAELTAKWVQEYNQRQRETFIASEKEKAQKKPRPRATPRAPNR
Ga0209161_102165152	3300026548	Soil	RASLPIESGVIGFAPGTKVTLVGQGASASTVTDGQYQFEVQSSQLTNDLDIAANIAKADYTAQAQLTELTAKWAQEYSQQQRDAFIASEKEKAQKKTRPRAAPRAPSPPQRR
Ga0209474_100047741	3300026550	Soil	VTLVGQGASASTVTDGQYQFEVQSSQLTNDLDIAANIVKADYTAQAQLAELTAKGAHEYALQQRDALVASEKEKAQKKTRPRAAPRAPSPPQRR
Ga0209577_101454191	3300026552	Soil	TPQRRVAPEGTYFLLERASLRIDSGVIGFAPGTKVTLLEQGDSTSKVTDGQYKFEVPLSQLSNDLDIAASVAQSDYAEQARITELTGKWAQEYAQQQRDALAASEKERVQKKTRPRPTPQAPK
Ga0207603_1053662	3300026820	Soil	GFAPGTKVTLVEEANSVSTVTDGDYQFKVPSSQLTNDLDVAASVASDDYAKQAQIAELTAKRAQQYSQQQRDAFIASEKEKAQKKTGKKTPRRPSPTPRH
Ga0209689_14189671	3300027748	Soil	LTTDSGVIGFAPGTKVTLLDQVDSANTVTDGRYQFHVPASQLTNDLDIAASIAKSDYTAQAQLAELTAKDADEYALQQRDALVGSEKAKAQKKTRPRAAPRAPTPVGRR
Ga0209180_101166771	3300027846	Vadose Zone Soil	TLLDQGNSASTVTDGQYQFAVPASQLTNDLDIAAGVAKSDYAAQAQLAELTAKWFQEYNQRQREAFIASEKEKAQKKPRPRATPRAPNR
Ga0307293_100784892	3300028711	Soil	PPGTKVTLLEQVDSASTVTDGQYQFKVQSSQLTNDLDIAAGIAKSDYTAQAQLAELTAKWAHEYAQQQRDALAASEKEKAQKAQKKTPPHPRHRQP
Ga0307299_102608841	3300028793	Soil	SLPIDSGVIGFPPGTKVTLLEQVDSASTVTDGQYQFKVQSSQLTNDLDIAAGIAKSDYTAQAQLAELTAKWAHEYAQQQRDALAASEKEKAQKAQKKTPPRVRHRQP
Ga0307302_104939202	3300028814	Soil	EGTFFLLQRASLPIDSGVIGFPPGTKVTLVEQADSVSTVTDGEYQFKVPSSQLTNDLDLAASVAKADYTAQTQIAELAAKWAQEYNQRQRDAFTASEKEKAQKKTGQKTPRRTASPTPKR
Ga0307296_100996051	3300028819	Soil	LLQRASLPIDSGVIGFPPGTKVTLLEQVDSASTVTDGQYQFKVQSSQLTNDLDIAAGIAKSDYTAQAQLAELTAKWAHEYAQQQRDALAASEKEKAQKAQKKTPPRVRHRQP
Ga0307312_100872013	3300028828	Soil	LLEQVDSASTVTDGQYQFRVQSSQLTNDLDIAAGIAKSDYTAQAQLAELTAKWAHEYAQQQRDALAASEKEKAQKAQKKTPPRVRHRQP
Ga0075382_112980971	3300030917	Soil	SLPIDSGVIGFAPGTQVTLVEQGESASTVTDGQYQFKVQWSQLTNDLDIAASAAKSDYNAQAKLAELTAKGAQEYAQQQRDALVDSEKEKPQKKTRPHPTPRAPKR
Ga0170834_1017260201	3300031057	Forest Soil	DGQYQFTVPSSQLTNDLDIAASVAQSDYAEQARITDLTGKWAEEYAQQQRDALAASEKERTQEKTRPRPTPRAPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061737

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences