Metagenome / Metatranscriptome Family F061158

Basic Information
Family ID	F061158
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	45 residues
Representative Sequence	FEVIADGERIAERGGNWLTRSFGAGYPDLDSVVEQLEKRRASGAAR
Number of Associated Samples	113
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.53 %
% of genes near scaffold ends (potentially truncated)	68.94 %
% of genes from short scaffolds (< 2000 bps)	87.12 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (84.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.848 % of family members)
Environment Ontology (ENVO)	Unclassified (28.788 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.455 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.73% β-sheet: 9.46% Coil/Unstructured: 60.81%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01740	STAS	3.79
PF07676	PD40	3.03
PF01887	SAM_HAT_N	2.27
PF07505	DUF5131	2.27
PF04456	DUF503	2.27
PF14559	TPR_19	1.52
PF14534	DUF4440	1.52
PF14279	HNH_5	1.52
PF08818	DUF1801	1.52
PF13620	CarboxypepD_reg	1.52
PF12680	SnoaL_2	1.52
PF01979	Amidohydro_1	1.52
PF00072	Response_reg	1.52
PF00589	Phage_integrase	0.76
PF01084	Ribosomal_S18	0.76
PF13671	AAA_33	0.76
PF03169	OPT	0.76
PF13795	HupE_UreJ_2	0.76
PF02517	Rce1-like	0.76
PF00166	Cpn10	0.76
PF14329	DUF4386	0.76
PF13520	AA_permease_2	0.76
PF10012	DUF2255	0.76
PF13683	rve_3	0.76
PF00291	PALP	0.76
PF01648	ACPS	0.76
PF01663	Phosphodiest	0.76
PF12034	DUF3520	0.76
PF00300	His_Phos_1	0.76
PF02954	HTH_8	0.76
PF02371	Transposase_20	0.76
PF01494	FAD_binding_3	0.76
PF03544	TonB_C	0.76
PF00486	Trans_reg_C	0.76
PF13180	PDZ_2	0.76
PF01656	CbiA	0.76
PF00578	AhpC-TSA	0.76
PF11005	DUF2844	0.76
PF07228	SpoIIE	0.76
PF03948	Ribosomal_L9_C	0.76
PF00107	ADH_zinc_N	0.76
PF13418	Kelch_4	0.76
PF03976	PPK2	0.76
PF00526	Dicty_CTDC	0.76
PF02604	PhdYeFM_antitox	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	2.27
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	2.27
COG1550	Stress-induced protein YlxP, DUF503 family	Function unknown [S]	2.27
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.52
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.52
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.52
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.52
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.76
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG1297	Predicted oligopeptide transporter, OPT family	General function prediction only [R]	0.76
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.76
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.76
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.76
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.76
COG0359	Ribosomal protein L9	Translation, ribosomal structure and biogenesis [J]	0.76
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.76
COG0238	Ribosomal protein S18	Translation, ribosomal structure and biogenesis [J]	0.76
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.09 %
Unclassified	root	N/A	15.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.09 %
Unclassified	root	N/A	15.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.09 %
Unclassified	root	N/A	15.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.18 %
Unclassified	root	N/A	15.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	25.76 %
Unclassified	root	N/A	15.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.76 %
Unclassified	root	N/A	15.91 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.76 %
Unclassified	root	N/A	15.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.76 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.76 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.76 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.76 %
Unclassified	root	N/A	15.91 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.76 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.76 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.76 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.76 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.76 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.76 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.76 %
Unclassified	root	N/A	15.91 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	1.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
unclassified Edaphobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → unclassified Edaphobacter	0.76 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.76 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.76 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.76 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.76 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.76 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.76 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.76 %
Unclassified	root	N/A	15.91 %
Granulicella sp. WH15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	1.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Edaphobacter sp. 4G125	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → unclassified Edaphobacter → Edaphobacter sp. 4G125	0.76 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.76 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.76 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.76 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.76 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.76 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.76 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402FQEJ3	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300000724\|JGI12581J11935_102026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300003218\|JGI26339J46600_10007760	All Organisms → cellular organisms → Bacteria	3135	Open in IMG/M
3300003219\|JGI26341J46601_10011703	Not Available	2873	Open in IMG/M
3300003351\|JGI26346J50198_1034329	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300003372\|JGI26336J50218_1009615	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300004005\|Ga0055448_10229301	Not Available	728	Open in IMG/M
3300004091\|Ga0062387_101374048	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300004092\|Ga0062389_100283161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1711	Open in IMG/M
3300004092\|Ga0062389_103125604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300005328\|Ga0070676_10340454	Not Available	1028	Open in IMG/M
3300005439\|Ga0070711_100385345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1134	Open in IMG/M
3300005467\|Ga0070706_101706141	Not Available	573	Open in IMG/M
3300005532\|Ga0070739_10052370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2636	Open in IMG/M
3300005534\|Ga0070735_10336608	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005547\|Ga0070693_100523048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300005591\|Ga0070761_10130188	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300005616\|Ga0068852_100155446	All Organisms → cellular organisms → Bacteria	2130	Open in IMG/M
3300005617\|Ga0068859_101125358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300005843\|Ga0068860_100314309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1536	Open in IMG/M
3300005843\|Ga0068860_100647204	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300006050\|Ga0075028_100357322	Not Available	826	Open in IMG/M
3300006059\|Ga0075017_101234769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300006086\|Ga0075019_10164467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1302	Open in IMG/M
3300006102\|Ga0075015_100011356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3763	Open in IMG/M
3300006102\|Ga0075015_100226496	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300006162\|Ga0075030_101303468	Not Available	570	Open in IMG/M
3300006174\|Ga0075014_100283211	Not Available	868	Open in IMG/M
3300006175\|Ga0070712_101114116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	685	Open in IMG/M
3300006237\|Ga0097621_102184946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300006844\|Ga0075428_100245897	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300006854\|Ga0075425_100183674	All Organisms → cellular organisms → Bacteria → Acidobacteria	2402	Open in IMG/M
3300006854\|Ga0075425_102828457	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300006904\|Ga0075424_100336195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1608	Open in IMG/M
3300006904\|Ga0075424_100382128	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300009087\|Ga0105107_10833754	Not Available	642	Open in IMG/M
3300009162\|Ga0075423_11565842	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300010048\|Ga0126373_10601090	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300010343\|Ga0074044_10358300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	957	Open in IMG/M
3300010366\|Ga0126379_11501288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300010373\|Ga0134128_12477556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300010399\|Ga0134127_12643827	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010400\|Ga0134122_11365892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300010403\|Ga0134123_11100549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300010403\|Ga0134123_12107595	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300011120\|Ga0150983_11608886	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300011120\|Ga0150983_13422053	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300011120\|Ga0150983_16606757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	766	Open in IMG/M
3300011430\|Ga0137423_1132567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300012096\|Ga0137389_11007877	Not Available	714	Open in IMG/M
3300012189\|Ga0137388_10474468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300012202\|Ga0137363_10934075	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300012206\|Ga0137380_10784610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	823	Open in IMG/M
3300012361\|Ga0137360_10668318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	891	Open in IMG/M
3300012361\|Ga0137360_10985615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300012362\|Ga0137361_10341233	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300012582\|Ga0137358_10002055	All Organisms → cellular organisms → Bacteria	11283	Open in IMG/M
3300012925\|Ga0137419_10583253	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300012929\|Ga0137404_11861717	Not Available	560	Open in IMG/M
3300012930\|Ga0137407_10049757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3396	Open in IMG/M
3300012984\|Ga0164309_10578114	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300014200\|Ga0181526_10117643	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300014501\|Ga0182024_12733090	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300017823\|Ga0187818_10081144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300017943\|Ga0187819_10296861	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	939	Open in IMG/M
3300017955\|Ga0187817_10252358	Not Available	1124	Open in IMG/M
3300017970\|Ga0187783_10883342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300017970\|Ga0187783_11125643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300017972\|Ga0187781_10007225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8141	Open in IMG/M
3300017972\|Ga0187781_10180648	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300018006\|Ga0187804_10171076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	921	Open in IMG/M
3300018006\|Ga0187804_10199906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300018012\|Ga0187810_10066943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. WH15	1376	Open in IMG/M
3300018089\|Ga0187774_11243180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	536	Open in IMG/M
3300019284\|Ga0187797_1150643	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300020579\|Ga0210407_10068568	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → unclassified Edaphobacter → Edaphobacter sp. 4G125	2660	Open in IMG/M
3300020579\|Ga0210407_10765757	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300020580\|Ga0210403_10897175	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300020583\|Ga0210401_10181193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1962	Open in IMG/M
3300021181\|Ga0210388_11356983	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300021420\|Ga0210394_10042308	All Organisms → cellular organisms → Bacteria	4012	Open in IMG/M
3300021420\|Ga0210394_11700981	Not Available	528	Open in IMG/M
3300021433\|Ga0210391_10324604	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300022532\|Ga0242655_10272396	Not Available	543	Open in IMG/M
3300022717\|Ga0242661_1134146	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300023250\|Ga0224544_1007811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1441	Open in IMG/M
3300024254\|Ga0247661_1009159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1632	Open in IMG/M
3300025311\|Ga0209343_10600835	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300025915\|Ga0207693_10458508	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300026041\|Ga0207639_11622786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300026557\|Ga0179587_10557361	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300026760\|Ga0207630_107756	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300026845\|Ga0207760_121663	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300026869\|Ga0207821_1008961	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300026887\|Ga0207805_1032173	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	504	Open in IMG/M
3300026921\|Ga0207860_1020361	Not Available	806	Open in IMG/M
3300027645\|Ga0209117_1073820	Not Available	965	Open in IMG/M
3300027655\|Ga0209388_1037144	All Organisms → cellular organisms → Bacteria → Acidobacteria	1401	Open in IMG/M
3300027773\|Ga0209810_1088750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1427	Open in IMG/M
3300027783\|Ga0209448_10049330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1416	Open in IMG/M
3300027812\|Ga0209656_10239141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300027818\|Ga0209706_10417459	Not Available	622	Open in IMG/M
3300027829\|Ga0209773_10386637	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300027911\|Ga0209698_10585789	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	858	Open in IMG/M
3300027986\|Ga0209168_10236154	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300028746\|Ga0302233_10201377	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300028906\|Ga0308309_10631471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	930	Open in IMG/M
3300029636\|Ga0222749_10580308	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300031231\|Ga0170824_109874840	Not Available	739	Open in IMG/M
3300031231\|Ga0170824_123940545	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300031446\|Ga0170820_11001304	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300031715\|Ga0307476_10412320	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031715\|Ga0307476_10593130	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300031720\|Ga0307469_10328037	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300031753\|Ga0307477_10567177	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300031753\|Ga0307477_10582908	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300031754\|Ga0307475_11290235	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300031820\|Ga0307473_10785808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300031823\|Ga0307478_10182600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1680	Open in IMG/M
3300031954\|Ga0306926_10983979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1005	Open in IMG/M
3300031962\|Ga0307479_10449152	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300032180\|Ga0307471_102708493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300032782\|Ga0335082_11671865	Not Available	510	Open in IMG/M
3300032782\|Ga0335082_11717396	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300032892\|Ga0335081_11587888	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300032895\|Ga0335074_10348924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1647	Open in IMG/M
3300032898\|Ga0335072_10012383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12174	Open in IMG/M
3300032898\|Ga0335072_10186088	All Organisms → cellular organisms → Bacteria → Acidobacteria	2485	Open in IMG/M
3300033134\|Ga0335073_10224723	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.15%
Host-Associated	Host-Associated	9.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Aquatic	Environmental → Aquatic	23.48%
Plants	Host-Associated → Plants	9.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.15%
Freshwater	Environmental → Aquatic → Freshwater	15.15%
Sediment	Environmental → Aquatic → Sediment	7.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.79%
Peat	Environmental → Terrestrial → Peat	1.52%
Marine	Environmental → Aquatic → Marine	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.88%
Loam	Environmental → Terrestrial → Soil → Loam	12.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.52%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.58%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.58%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.58%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.06%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.27%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.76%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.76%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000724	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300003372	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1	Environmental	Open in IMG/M
3300004005	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025311	Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026760	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-B (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061158

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_05070580	2189573004	Grass Soil	KTGQFDVIADGERIAERGGNWFTRRFGAGYPDLDSLVEQLDEKRRASGAA
JGI12581J11935_1020261	3300000724	Tropical Forest Soil	VERGGNWLTRSFGAGYPDLDSVVDQIEKYRVIDAAR*
JGI26339J46600_100077604	3300003218	Bog Forest Soil	MKIAERGGNWFTRSFGAGYPDLENVVEQLEKRRASDAAR*
JGI26341J46601_100117032	3300003219	Bog Forest Soil	GKHGQFEVIADGKRIAERGGNWLTRSLGAGYPDLDSVVEQLEKHRAIGAAR*
JGI26346J50198_10343292	3300003351	Bog Forest Soil	VFVDGEKISERGGNWFTRSFGAGYPDLDSVIEQIEEHRAIDLAKPV*
JGI26336J50218_10096151	3300003372	Bog Forest Soil	VVAAGKTGQFEVIADGERVAERGGNWFTRSFGAGYPDLESVVEQLEKRRGG*
Ga0055448_102293011	3300004005	Natural And Restored Wetlands	DVIADGEKIAERGGNWLTRSFGVGYPNLDSVVDELERRQA*
Ga0062387_1013740482	3300004091	Bog Forest Soil	FEVIADGERIAERGGNWLTRSFGAGYPDLDSVVEQLEKRRASGAAR*
Ga0062389_1002831613	3300004092	Bog Forest Soil	KTGQFDVVADGEKIAERGGNWLTRSFGAGYPDLDSVVEKLEKHRK*
Ga0062389_1031256041	3300004092	Bog Forest Soil	PGKTGQFEVIADGERIAERGGNWFTRSFGAGYPDLDSVVEQLEKYRAIDAAR*
Ga0070676_103404542	3300005328	Miscanthus Rhizosphere	TTPGKTGQFEVIADGKRIAERGGNWFTRSFGVGYPDLESVVEELEKHRAGAAAT*
Ga0070711_1003853452	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VIADGERIAERGGNWFTRSFGGGYPDLDSLVQQLDKKRREGGAA*
Ga0070706_1017061411	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KIADGERISERSGSWFTRSFGAGAGYSDLDNMVEQLEKHRANDLAR*
Ga0070739_100523703	3300005532	Surface Soil	VIADGKRIAERGGNWLTRRFRAGYPDLDSVVDLIAKWRADATARETAR*
Ga0070735_103366082	3300005534	Surface Soil	VIRPGRTGQFEVIADGQSIAERGGNWFTRSFGAGYPSLDRVLEELENRAARS*
Ga0070693_1005230481	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VVTPGKTGQFEVIADGETVAQRGGNWLTRSLGAGYPDLDGVVEQLEKRRASNAG*
Ga0070761_101301884	3300005591	Soil	QFDVVADGEKIAERGGNWLTRSFGAGYPDLEGVVEKLEKQRK*
Ga0068852_1001554462	3300005616	Corn Rhizosphere	VVTPGKTGQFTVLADGEPVVERGGNWFTRSFGAGYPDLDSVIDQLQKRSG*
Ga0068859_1011253582	3300005617	Switchgrass Rhizosphere	GQFEVIADGERIAERGGNWFTRIFGAGYPDLDSLVQQLDKKRLRVAQLD*
Ga0074470_1033593015	3300005836	Sediment (Intertidal)	LADGRKVAERGGNWMTRSFGAGYPDPDRVVEQLEKLRAADAAR*
Ga0068860_1003143092	3300005843	Switchgrass Rhizosphere	KRGGNWFTRRFGAGYPDLDSVVEQLVEKRRADGAA*
Ga0068860_1006472042	3300005843	Switchgrass Rhizosphere	VIAEGERIAKRGGNWFTRRFGAGYPDLDSVVEQLNEKRRAGGAA*
Ga0075028_1003573221	3300006050	Watersheds	ERGGNWFTRRFGAGYPDLESVVEQLEKHRTSGTAP*
Ga0075017_1012347691	3300006059	Watersheds	GERIAERGGNWFTRSFGAGYPDLDSVVEQLEKHRAIDASR*
Ga0075019_101644672	3300006086	Watersheds	VIADGETIAERGGNWFTRSFGAGYPDLESVVDQLEKRRG*
Ga0075015_1000113561	3300006102	Watersheds	GDTGQFDVLADGQRIARRGGNFLTRRFGAGYPDLDSVVELLVEKRRVSDAAP*
Ga0075015_1002264963	3300006102	Watersheds	QFEVIADGKRIAERGGNWLTRSFGAGYPDLEGVVEQLKKHRGSDAAR*
Ga0075030_1013034681	3300006162	Watersheds	PVLTPGKTGQFEVIADGKKIAERGGNWFSRKFGAGYPDLNGVVEELEKQRR*
Ga0075014_1002832112	3300006174	Watersheds	QRIARRGGNFLTRRFGAGYPDLDSVVELLVEKRRVSDAAP*
Ga0070712_1011141161	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AKIAERGGNWITRSFGAGYPDLESVVEQLENRRAGEASR*
Ga0097621_1021849462	3300006237	Miscanthus Rhizosphere	VVTPGKTGQFTVLADGQMVAERGGNWLTRSFGAGYPDLNSVVDQLQKRS*
Ga0075428_1002458972	3300006844	Populus Rhizosphere	VVTPGKTGQFDVFADGKKIAERGGNVITRRFGAGYPDLEVVVQQLARLTG*
Ga0075425_1001836741	3300006854	Populus Rhizosphere	VIADGEKIAERGGNWFTRIFGAGYPDFDSLVQQLDKKRRAGGTA*
Ga0075425_1028284571	3300006854	Populus Rhizosphere	TPGKTGQFEVIADGEKIAERGGNWFTRSLGAGYPDLESVVEKLEKRRARDAAP*
Ga0075424_1003361953	3300006904	Populus Rhizosphere	VIAEGERIAKRGGNWFTRRFGAGYPDLDSVVEQLVEKRRADGAA*
Ga0075424_1003821281	3300006904	Populus Rhizosphere	VITPGKTGQFEVIADGDTVAERGGNWLTRSFGAGYPDLEGVVQKLERRDK*
Ga0105107_108337542	3300009087	Freshwater Sediment	ADGKRIAERGGNWFTRSFGGGYPDVDVVIEQLEKHRTSDAAR*
Ga0075423_115658422	3300009162	Populus Rhizosphere	QFEVIADSQTIAKRGGNWFTRSFGAGYPDLDRVVEQLDKHRKSDTAR*
Ga0126373_106010901	3300010048	Tropical Forest Soil	GNKGQFDVIADGQMIAKRGGNFITRSFGVGYPDLDGVVELLVKKQHASGEAR*
Ga0074044_103583001	3300010343	Bog Forest Soil	PGKAGQFEVIADGRKIAERGGNWLTRTFGAGYPDLDAVVEQLKKRGAGGAAR*
Ga0126379_115012883	3300010366	Tropical Forest Soil	VITPGKTGQFEVIADGDTVAERGGNWLTRSFGAGYPDLEGVVEKLERRSK*
Ga0134128_124775561	3300010373	Terrestrial Soil	RGKIGQFEVRVDGEKIVERGGNWITRLFGAGYPDLDKVVDLVQSRTSELR*
Ga0134127_126438273	3300010399	Terrestrial Soil	VTTPGKTGQFEVIADGKTIAERGGNWFTRSFGAGYPDLEGVVEDLEKQRAGT*
Ga0134122_113658921	3300010400	Terrestrial Soil	VDGKKIAERGGNWFTRSFGAGYPSLDKVVEQLVQKHRAIDSA*
Ga0134123_111005491	3300010403	Terrestrial Soil	IAERGGNWFTRSFGAGYPSLDKVVEQLVQKHRAIDSA*
Ga0134123_121075951	3300010403	Terrestrial Soil	KTGQFDVIADGTKIATRGGNWFTRQLGAGYPDLDEVVTLLEKHRTGTAQ*
Ga0150983_116088862	3300011120	Forest Soil	VVTPGKTGQFEVLADGERIAERGGNWFTRSFGAGYPDLDNVVELLQKRITK*
Ga0150983_134220531	3300011120	Forest Soil	VPGKTGQFDVMADGEKIAERGGNWLTRSFGAGYPDLDSVIEKLENHRT*
Ga0150983_166067571	3300011120	Forest Soil	TGQFEVIADGERIAERGGNWITRSFGAGYPDLNGVVEQLQRRATDAAPRQQVC*
Ga0137423_11325671	3300011430	Soil	VIADGERIAERGGNWVTRRFGAGYPELDGVVEQLERRRGRAV*
Ga0137389_110078771	3300012096	Vadose Zone Soil	RIAERGGNWFTRSFGAGYPDLESVVEQLAKHRANDAAR*
Ga0137388_104744681	3300012189	Vadose Zone Soil	PGKTGQFEVIADGETIAERGGSWFTRSFGAGYPDLDSVVEQLVEKHRTSDAAR*
Ga0137363_109340752	3300012202	Vadose Zone Soil	FEVLADGERIAERGGNWFTRSFGAGYPDLDNVVEQLQKRITK*
Ga0137380_107846102	3300012206	Vadose Zone Soil	GQFEVIADGKRIAERGGNWFTRSFGAGYPDLESVVEQLAKHRANDAAR*
Ga0137360_106683181	3300012361	Vadose Zone Soil	VIADGERIAERGGNWFTRSFGAGYPDLDSVVEQLEKHRANDLAR*
Ga0137360_109856152	3300012361	Vadose Zone Soil	VIADGERIAERGGNWFTRSFGAGYPDLDSVVEQLEKHRANDTAR*
Ga0137361_103412333	3300012362	Vadose Zone Soil	ADGEKIAERGGNWFTRSFGAGYPDLESVVEQLEKQRD*
Ga0137358_1000205514	3300012582	Vadose Zone Soil	MPDKTGQLEVIADGERIAERGGNWFTRSFGAGYPDLDSVVEQLEKHRANDTAR*
Ga0137419_105832531	3300012925	Vadose Zone Soil	TPGKLGQFEVIADSERIVERGGNWLTRSFGAGYPDLESVVEQLEKHRKSRSAS*
Ga0137404_118617171	3300012929	Vadose Zone Soil	IADGEKIAERGGNWFTRSFGAGYPDLESVVEQLEKHRA*
Ga0137407_100497572	3300012930	Vadose Zone Soil	VKTPGRTGQFEVIADGKRIAERGGNWLTRSFGAGYPDLDGVVDQLEKHRAGEAAR*
Ga0164309_105781141	3300012984	Soil	ITHGKTGQFDVIADGERIAERGGNWFTRRFGAGYPDLDSLVEQLDEKRRASGAA*
Ga0181526_101176431	3300014200	Bog	IADGERIAERGGNWLTRSFGAGYPDFDSVVEQLEKYRASHAAR*
Ga0182024_127330901	3300014501	Permafrost	TGQFEIIADGERIAERGGNWLTRSFGAGYPDLDRVVERLEQKQTGRVRSG*
Ga0187818_100811442	3300017823	Freshwater Sediment	VVTPGKTGQFDVIADGEKIVERGGNWLTRSFGAGYPDWDNVVKLLEQRRALRG
Ga0187819_102968611	3300017943	Freshwater Sediment	DGERIAERGGNWFTRRFGAGYPDLDSVVEQLDEKRRASGAA
Ga0187817_102523581	3300017955	Freshwater Sediment	ERGGNWFTRSFGAGYPDLNSVVERLEQRRASDTAR
Ga0187783_108833421	3300017970	Tropical Peatland	FDVIADGEKIAERGGNWFTRSFGAGYPDLDNLVELLEKRRDLRG
Ga0187783_111256431	3300017970	Tropical Peatland	FDVIADGEKIAERGGNWFTRSFGAGYPDLDNLVELLEKRRALRG
Ga0187781_100072256	3300017972	Tropical Peatland	VVRSGSTGQFQVIADGETIAERGGNWLTRRFGAGYPDLEGVVSQIEKRLNSQ
Ga0187781_101806482	3300017972	Tropical Peatland	MADGQKIAERGGNWFTRSFGAGYPDLNNVVALLEKRGSARD
Ga0187804_101710762	3300018006	Freshwater Sediment	GQFEVIADGERIAERGGNWFTRRFGAGYPDLDSVVEQLDEKRRASGAG
Ga0187804_101999062	3300018006	Freshwater Sediment	VVTPGKTGQFDVIADGEKIVERGGNWLTRSFGAGYPDLDNVVKLLEQRRALRG
Ga0187810_100669432	3300018012	Freshwater Sediment	GKRIAERGGNWFTRSFGAGYPDLDSVVEQLEKHRASDAAR
Ga0187774_112431802	3300018089	Tropical Peatland	GQFDVIADGKRIAQRGGNWFTRSFGGGYPDLESVVEQLEKNRTSDAAR
Ga0187797_11506431	3300019284	Peatland	QFEVLADGQKIAARGGNWLTRKFGAGYPDLESVLTLLEKRSAGQ
Ga0210407_100685682	3300020579	Soil	KTGQFTVVADGEKIAERGGNWLTRSFGAGYPDLDRVVEKLEN
Ga0210407_107657571	3300020579	Soil	QFEVIADGERIAERGGNWLTRSLGAGYPDLNSVIKQLEQRRTGGTAR
Ga0210403_108971752	3300020580	Soil	DVVADGEKIAERGGNWLTRSFGAGYPDLDSVIEKLEKHRK
Ga0210401_101811932	3300020583	Soil	VIADGEMIAARGGNWFTRRFGAGYPDLDSLVEQLDEKRRASDAD
Ga0210388_113569831	3300021181	Soil	FDVVADGEKIAERGGNWLTRSFGAGYPDLNSVIEKLEKHQK
Ga0210383_107759371	3300021407	Soil	ERGGNWLTRSFGAGYPDLNSVIEQLEHRRASGTAR
Ga0210394_100423081	3300021420	Soil	DEKIAERGGNWLTRSFGAGYPDLDSVIEKLEKHRK
Ga0210394_117009811	3300021420	Soil	TGQFEVIADGERVVERGGNWFTRKLGAGYPDLESVVEQLEKRRAGGGGR
Ga0210391_103246041	3300021433	Soil	ERIAERGGNWLTRSLGAGYPDLNSVIKQLEQRRTGGTAR
Ga0242655_102723961	3300022532	Soil	GKTGQFEVIADGERIVERGGNWFTRSLGAGYPDLDSLVDQLEKRRASGAAR
Ga0242661_11341462	3300022717	Soil	PGKTGQFEVIADGERVAERGGNWFTRKFGAGYPGLDSVVEQLEKRRASGTDR
Ga0224544_10078113	3300023250	Soil	TGQFEVIADGKRIAERGGNWFTRSFGAGYPDLKGVVEQLEKRRGSDAAR
Ga0247661_10091592	3300024254	Soil	VIADGEKIAERGGNWFTRMFGAGYPDFDSLVQQLDKKRRAGGTA
Ga0209343_106008352	3300025311	Groundwater	MVDGKKIAERGGNLITRSFGAGYPDPSNIVDMIEKQAGSDKTS
Ga0207693_104585081	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AKIAERGGNWITRSFGAGYPDLESVVEQLENRRAGEASR
Ga0207639_116227861	3300026041	Corn Rhizosphere	DVFADGEKVVERGGNWFTRSFGAGYPDLDSVVDQLEKRRG
Ga0179587_105573611	3300026557	Vadose Zone Soil	LADGERIAERGGNWFTRSFGAGYPDLDNVVALLENRITK
Ga0207630_1077561	3300026760	Soil	ADGEKIAERGGNWLTRSFGAGYPDLDSVIEKLEKHRK
Ga0207760_1216631	3300026845	Tropical Forest Soil	FEVIADGKRVAERGGNWLTRSFGAGYPDLESVVEQIEKYRAIDAAR
Ga0207821_10089612	3300026869	Tropical Forest Soil	EVIADGKRVAERGGNWLTRSFGAGYPDLESVVEQIEKYRAIDAAR
Ga0207805_10321732	3300026887	Tropical Forest Soil	ERGGNWLTRRFGAGYPDLERVVNRLAEKNRAAARQ
Ga0207860_10203612	3300026921	Tropical Forest Soil	ADGKRVAERGGNWLTRSFGAGYPDLESVVEQIEKYRAIDAAR
Ga0207740_10029072	3300027011	Tropical Forest Soil	VERGGNWLTRSFGAGYPDLDSVVDQIEKYRVIDAAR
Ga0209117_10738201	3300027645	Forest Soil	LFAAEEDGERIAEGGGNWFTRSFGTGYPDLDSVVEQLVEKRRASDVP
Ga0209388_10371442	3300027655	Vadose Zone Soil	DGERVAERGGNWLTRSFGAGYPDLDSVVEQLEKRRRPQG
Ga0209810_10887502	3300027773	Surface Soil	VIADGKRIAERGGNWLTRRFRAGYPDLDSVVDLIAKWRADATARETAR
Ga0209448_100493302	3300027783	Bog Forest Soil	VFVDGEKISERGGNWFTRSFGAGYPDLDSVIEQIEEHRAIDLAKPV
Ga0209656_102391412	3300027812	Bog Forest Soil	MKIAERGGNWFTRSFGAGYPDLENVVEQLEKRRASDAAR
Ga0209706_104174592	3300027818	Freshwater Sediment	ERGGNWFTRSFGGGYPDVDVVIEQLEKHRTSDAAR
Ga0209773_103866371	3300027829	Bog Forest Soil	VPGKTGQFDVVADGEKIAERGGNWFTRSFGVGYPDLDSVVETLEKHRK
Ga0209698_105857893	3300027911	Watersheds	GERIAERGGNWFTRSFGAGYPDLNRVVEQLEKRRASDTAR
Ga0209168_102361542	3300027986	Surface Soil	VIRPGRTGQFEVIADGQSIAERGGNWFTRSFGAGYPSLDRVLEELENRAARS
Ga0302233_102013771	3300028746	Palsa	GKTGQFEVIADGKRIAERGGNWFTRSFGAGYPDLKGVVEQLEKRRGSDAAR
Ga0308309_106314712	3300028906	Soil	LTPVKTGQFDVVADGEKIAERGGNWLTRSFGAGYPDLDSIVEKLEKHRK
Ga0222749_105803082	3300029636	Soil	GQFEVIADGERIAERGGNWFTRSFGVGYPDLDSVVKQLEQRRARDAAR
Ga0170824_1098748401	3300031231	Forest Soil	GERITQRGGNWFTRSFGADYPDLDSVVEQIAKRRVSDAAR
Ga0170824_1239405451	3300031231	Forest Soil	MIAERGGNWFTRSFGLGYPDLEYVVEQLEKRRASDAAR
Ga0170820_110013042	3300031446	Forest Soil	MIAERGGNWFTRSFGLGYPDLENVVEQLEKRRASDAAR
Ga0307476_104123202	3300031715	Hardwood Forest Soil	MADGEKIAERGGNWFTRSFGAGYPDLNNVVALLEKQRSARG
Ga0307476_105931302	3300031715	Hardwood Forest Soil	DVVADGEKIAERGGNWLTRSFGAGYPDLEGVVEKLEKHRT
Ga0307469_103280371	3300031720	Hardwood Forest Soil	IAERAGNWFTRSFGAGYPDVETVVEQLEKYHASEAAR
Ga0307477_105671772	3300031753	Hardwood Forest Soil	ADGERIAERGGNWFTQKFGAGYPDLDSVVEQLEEKRRASGAA
Ga0307477_105829082	3300031753	Hardwood Forest Soil	IAERGGNWFTRSFGAGYPDLDSVLEQLEKRRSSMK
Ga0307475_112902351	3300031754	Hardwood Forest Soil	IADGEKIAERGGNLFTRRFGGGYPDLDSVVEQLGKHRESHSA
Ga0307473_107858082	3300031820	Hardwood Forest Soil	EVIADGEKIAERGGNWFTRSFGAGYPDLDSVVEQLVEKHRASGAT
Ga0307478_101826002	3300031823	Hardwood Forest Soil	VIADGETIAERGGNWFTRKFGAGYPDLDSLVEQLDKKRRASGAA
Ga0306926_109839792	3300031954	Soil	VITPGKTGQFEVIADGETVAERGGNWITRSFGAGYPDLQSVVEELEKRAG
Ga0307479_104491521	3300031962	Hardwood Forest Soil	GKTGQFEVIADGERIAERGGNWLTRSFGAGYPDLNSVIEQLEHRRASGPAR
Ga0307471_1027084931	3300032180	Hardwood Forest Soil	GERIAERGGNWFTRSFGAGYPDLDSVVEQLEKHRRPQG
Ga0335082_116718651	3300032782	Soil	ERGGNWLTRSFGAGYPDLEGVVKQLEKHRTTDAAQ
Ga0335082_117173961	3300032782	Soil	FDVIADGARIARRGGNWLTRSFGAGYPDLDRVVEQLEKIRASRSAR
Ga0335081_115878881	3300032892	Soil	KSGRTGQFEVFADGERIAERGGNWLTRSFGLGYPTLDVIIQQLVQKRQTETNSK
Ga0335074_103489242	3300032895	Soil	MCCSPPGKTGQFDVVADGEKFAERGGNWFTRSFGAGYPDLESVVEKLEKHSK
Ga0335072_1001238311	3300032898	Soil	VIADGEKIASRGGNWFTQRFGAGYPDLDRVVEQIEKRRASDAQR
Ga0335072_101860882	3300032898	Soil	MWMCCSPPGKTGQFDVVADGEKFAERGGNWFTRSFGAGYPDLESVVEKLEKHSK
Ga0335073_102247231	3300033134	Soil	CSPPGKTGQFDVVADGEKFAERGGNWFTRSFGAGYPDLESVVEKLEKHSK

Hidden Markov Model


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