Metagenome Family F061029

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061029
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	67 residues
Representative Sequence	MADTNTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKP
Number of Associated Samples	101
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	46.21 %
% of genes near scaffold ends (potentially truncated)	34.85 %
% of genes from short scaffolds (< 2000 bps)	80.30 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.788 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (10.606 % of family members)
Environment Ontology (ENVO)	Unclassified (35.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.848 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.88% β-sheet: 6.45% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF06742	DUF1214	4.55
PF13637	Ank_4	4.55
PF00072	Response_reg	3.79
PF00150	Cellulase	3.03
PF00293	NUDIX	2.27
PF13229	Beta_helix	2.27
PF01988	VIT1	2.27
PF04545	Sigma70_r4	1.52
PF00069	Pkinase	1.52
PF12833	HTH_18	0.76
PF13407	Peripla_BP_4	0.76
PF07683	CobW_C	0.76
PF00441	Acyl-CoA_dh_1	0.76
PF08323	Glyco_transf_5	0.76
PF12840	HTH_20	0.76
PF01757	Acyl_transf_3	0.76
PF04972	BON	0.76
PF02371	Transposase_20	0.76
PF09900	DUF2127	0.76
PF12796	Ank_2	0.76
PF00899	ThiF	0.76
PF13857	Ank_5	0.76
PF07452	CHRD	0.76
PF16162	DUF4868	0.76
PF09826	Beta_propel	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.06
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	4.55
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	4.55
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	3.03
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	3.03
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	2.27
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	2.27
COG0297	Glycogen synthase	Carbohydrate transport and metabolism [G]	0.76
COG0438	Glycosyltransferase involved in cell wall bisynthesis	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0523	Zinc metallochaperone YeiR/ZagA and related GTPases, G3E family	General function prediction only [R]	0.76
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
All Organisms	root	All Organisms	45.45 %
Polyangium	genus	Polyangium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
cellular organisms	root	All Organisms → cellular organisms	45.45 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.45 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.30 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.52 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.76 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	14.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.55 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.52 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	14.39 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.27 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.52 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.76 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.76 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	8.33 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	5.30 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.27 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.52 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.76 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.76 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.27 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.52 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	1.52 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20	0.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.76 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.76 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.76 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.76 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.27 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	1.52 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.52 %
unclassified Oscillospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae	0.76 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.76 %
Myxococcales bacterium 68-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	0.76 %
Aeromonas veronii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas veronii	0.76 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20	0.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.27 %
Verrucomicrobium spinosum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	1.52 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.52 %
Oscillospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	0.76 %
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	0.76 %
Myxococcales bacterium 68-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	0.76 %
Aeromonas veronii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas veronii	0.76 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20	0.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.27 %
Verrucomicrobium spinosum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	1.52 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.52 %
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	0.76 %
Oscillospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	0.76 %
Myxococcales bacterium 68-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	0.76 %
Aeromonas veronii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas veronii	0.76 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20	0.76 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003321\|soilH1_10180101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1572	Open in IMG/M
3300003465\|P52013CM_1115267	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300004081\|Ga0063454_101449302	Not Available	584	Open in IMG/M
3300004156\|Ga0062589_100171774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1522	Open in IMG/M
3300004156\|Ga0062589_100920417	Not Available	807	Open in IMG/M
3300004156\|Ga0062589_102420414	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300004463\|Ga0063356_100048749	All Organisms → cellular organisms → Bacteria	4252	Open in IMG/M
3300004463\|Ga0063356_101932275	Not Available	890	Open in IMG/M
3300004463\|Ga0063356_105509264	Not Available	543	Open in IMG/M
3300004479\|Ga0062595_100209998	Not Available	1216	Open in IMG/M
3300004633\|Ga0066395_10002237	All Organisms → cellular organisms → Bacteria	6725	Open in IMG/M
3300005093\|Ga0062594_100179830	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300005093\|Ga0062594_101193416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	753	Open in IMG/M
3300005093\|Ga0062594_102350089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300005184\|Ga0066671_10433793	Not Available	843	Open in IMG/M
3300005329\|Ga0070683_100021607	All Organisms → cellular organisms → Bacteria	5744	Open in IMG/M
3300005329\|Ga0070683_100252693	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300005329\|Ga0070683_100371970	Not Available	1361	Open in IMG/M
3300005329\|Ga0070683_102328141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	514	Open in IMG/M
3300005331\|Ga0070670_100006488	All Organisms → cellular organisms → Bacteria	9902	Open in IMG/M
3300005331\|Ga0070670_100595528	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300005332\|Ga0066388_102973054	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300005334\|Ga0068869_101164106	Not Available	677	Open in IMG/M
3300005335\|Ga0070666_11087055	Not Available	594	Open in IMG/M
3300005340\|Ga0070689_100124291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2063	Open in IMG/M
3300005340\|Ga0070689_100898326	Not Available	784	Open in IMG/M
3300005341\|Ga0070691_10799810	Not Available	574	Open in IMG/M
3300005354\|Ga0070675_101305718	Not Available	669	Open in IMG/M
3300005355\|Ga0070671_100119564	Not Available	2217	Open in IMG/M
3300005355\|Ga0070671_101024104	Not Available	724	Open in IMG/M
3300005356\|Ga0070674_101860154	Not Available	546	Open in IMG/M
3300005364\|Ga0070673_100023083	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4541	Open in IMG/M
3300005434\|Ga0070709_10602454	Not Available	846	Open in IMG/M
3300005438\|Ga0070701_11002708	Not Available	582	Open in IMG/M
3300005440\|Ga0070705_101332653	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005456\|Ga0070678_101836326	Not Available	572	Open in IMG/M
3300005457\|Ga0070662_100142832	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300005458\|Ga0070681_10051366	All Organisms → cellular organisms → Bacteria → Proteobacteria	4112	Open in IMG/M
3300005466\|Ga0070685_11511276	Not Available	518	Open in IMG/M
3300005535\|Ga0070684_102102138	Not Available	533	Open in IMG/M
3300005544\|Ga0070686_100686847	Not Available	815	Open in IMG/M
3300005614\|Ga0068856_101253795	Not Available	757	Open in IMG/M
3300005618\|Ga0068864_100676865	Not Available	1006	Open in IMG/M
3300005618\|Ga0068864_102610451	Not Available	511	Open in IMG/M
3300005764\|Ga0066903_100028400	All Organisms → cellular organisms → Bacteria	6242	Open in IMG/M
3300005764\|Ga0066903_107190178	Not Available	576	Open in IMG/M
3300005843\|Ga0068860_101933197	Not Available	611	Open in IMG/M
3300006046\|Ga0066652_101771318	Not Available	560	Open in IMG/M
3300006046\|Ga0066652_101781145	Not Available	557	Open in IMG/M
3300006196\|Ga0075422_10155824	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	915	Open in IMG/M
3300006623\|Ga0101568_10674788	Not Available	595	Open in IMG/M
3300006881\|Ga0068865_100349627	Not Available	1197	Open in IMG/M
3300009094\|Ga0111539_10005569	All Organisms → cellular organisms → Bacteria	16284	Open in IMG/M
3300009137\|Ga0066709_101728805	Not Available	884	Open in IMG/M
3300009156\|Ga0111538_10020679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	8601	Open in IMG/M
3300010362\|Ga0126377_12619258	Not Available	580	Open in IMG/M
3300010398\|Ga0126383_10038117	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	3893	Open in IMG/M
3300010403\|Ga0134123_10810643	Not Available	931	Open in IMG/M
3300010403\|Ga0134123_12371820	Not Available	595	Open in IMG/M
3300011417\|Ga0137326_1139938	Not Available	559	Open in IMG/M
3300011432\|Ga0137428_1227632	Not Available	552	Open in IMG/M
3300012231\|Ga0137465_1062234	Not Available	1107	Open in IMG/M
3300012354\|Ga0137366_10016251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas veronii	5836	Open in IMG/M
3300012910\|Ga0157308_10204218	Not Available	669	Open in IMG/M
3300012914\|Ga0157297_10067528	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300012955\|Ga0164298_10069898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1761	Open in IMG/M
3300012961\|Ga0164302_10672197	Not Available	762	Open in IMG/M
3300013297\|Ga0157378_11842359	Not Available	653	Open in IMG/M
3300014318\|Ga0075351_1012133	Not Available	1243	Open in IMG/M
3300014326\|Ga0157380_10900965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	910	Open in IMG/M
3300014745\|Ga0157377_10571251	Not Available	802	Open in IMG/M
3300014969\|Ga0157376_12208244	Not Available	589	Open in IMG/M
3300015371\|Ga0132258_10012992	All Organisms → cellular organisms → Bacteria	17600	Open in IMG/M
3300015371\|Ga0132258_10033217	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20	11567	Open in IMG/M
3300015371\|Ga0132258_10714988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	2522	Open in IMG/M
3300015371\|Ga0132258_11110136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1999	Open in IMG/M
3300015371\|Ga0132258_12540276	Not Available	1281	Open in IMG/M
3300015374\|Ga0132255_100048559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5513	Open in IMG/M
3300015374\|Ga0132255_101830247	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300018067\|Ga0184611_1192214	Not Available	726	Open in IMG/M
3300018081\|Ga0184625_10034151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2502	Open in IMG/M
3300018083\|Ga0184628_10035584	All Organisms → cellular organisms → Bacteria	2492	Open in IMG/M
3300018083\|Ga0184628_10259923	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300018469\|Ga0190270_11201194	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300018481\|Ga0190271_12894168	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300019361\|Ga0173482_10570557	Not Available	563	Open in IMG/M
3300019361\|Ga0173482_10789885	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	502	Open in IMG/M
3300020005\|Ga0193697_1031544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1323	Open in IMG/M
3300022756\|Ga0222622_10083105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	1920	Open in IMG/M
3300024187\|Ga0247672_1005796	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1984	Open in IMG/M
3300025271\|Ga0207666_1024439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	902	Open in IMG/M
3300025315\|Ga0207697_10203915	Not Available	870	Open in IMG/M
3300025315\|Ga0207697_10560206	Not Available	502	Open in IMG/M
3300025899\|Ga0207642_10039895	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300025903\|Ga0207680_10684660	Not Available	735	Open in IMG/M
3300025906\|Ga0207699_11348703	Not Available	528	Open in IMG/M
3300025912\|Ga0207707_10191438	Not Available	1784	Open in IMG/M
3300025920\|Ga0207649_11110195	Not Available	624	Open in IMG/M
3300025925\|Ga0207650_10085675	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2397	Open in IMG/M
3300025925\|Ga0207650_10377620	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300025926\|Ga0207659_10083932	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300025926\|Ga0207659_11799007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300025930\|Ga0207701_10070154	All Organisms → cellular organisms → Bacteria	3182	Open in IMG/M
3300025930\|Ga0207701_11377805	Not Available	576	Open in IMG/M
3300025931\|Ga0207644_10971236	Not Available	713	Open in IMG/M
3300025931\|Ga0207644_11527762	Polyangium → Polyangium aurulentum	560	Open in IMG/M
3300025938\|Ga0207704_11502340	Not Available	578	Open in IMG/M
3300025940\|Ga0207691_10509754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1021	Open in IMG/M
3300025944\|Ga0207661_11220035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	692	Open in IMG/M
3300025944\|Ga0207661_11736264	Not Available	569	Open in IMG/M
3300025960\|Ga0207651_10568219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	988	Open in IMG/M
3300025986\|Ga0207658_10779987	Not Available	867	Open in IMG/M
3300026047\|Ga0208658_1023232	Not Available	519	Open in IMG/M
3300026078\|Ga0207702_10535950	Not Available	1144	Open in IMG/M
3300026078\|Ga0207702_11034641	Not Available	815	Open in IMG/M
3300026078\|Ga0207702_11902972	Not Available	586	Open in IMG/M
3300026116\|Ga0207674_11684167	Not Available	602	Open in IMG/M
3300026118\|Ga0207675_101865640	Not Available	620	Open in IMG/M
3300027874\|Ga0209465_10006503	All Organisms → cellular organisms → Bacteria	5124	Open in IMG/M
3300027907\|Ga0207428_10063543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2916	Open in IMG/M
3300028145\|Ga0247663_1085581	Not Available	564	Open in IMG/M
3300028379\|Ga0268266_11176476	Not Available	742	Open in IMG/M
3300028589\|Ga0247818_11379511	Not Available	508	Open in IMG/M
3300028768\|Ga0307280_10002726	All Organisms → cellular organisms → Bacteria	4431	Open in IMG/M
3300028819\|Ga0307296_10699773	Not Available	554	Open in IMG/M
3300030336\|Ga0247826_11695561	Not Available	516	Open in IMG/M
3300031547\|Ga0310887_10927126	Not Available	553	Open in IMG/M
3300031858\|Ga0310892_10071041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1807	Open in IMG/M
3300032000\|Ga0310903_10513922	Not Available	627	Open in IMG/M
3300032002\|Ga0307416_100918394	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300032003\|Ga0310897_10543955	Not Available	568	Open in IMG/M
3300032012\|Ga0310902_10136137	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1370	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.58%
Host-Associated	Host-Associated	42.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.52%
Plants	Host-Associated → Plants	42.42%
Aquatic	Environmental → Aquatic	6.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.70%
Sediment	Environmental → Aquatic → Sediment	6.06%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.82%
Loam	Environmental → Terrestrial → Soil → Loam	18.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.52%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.06%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.52%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.09%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.30%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.03%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.03%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.27%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006623	Soil microbial communities from the Leymus chinensis steppe, China - after adding 5.25 g N m- 2, yr-1	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026047	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilH1_101801013	3300003321	Sugarcane Root And Bulk Soil	MGDTKSAGSNCPVCKLPVGESKHFCHLCRAAGRDVRFDSETCGADHLMKTHTQEEIDRFDAAQTSAKP*
P52013CM_11152672	3300003465	Ore Pile And Mine Drainage Contaminated Soil	MAEKNAAGTCPICQLPIGESKHFCHLCRANGLEVRFDSGPCEAEHLTKAHTEDEIERFDSEKT
Ga0063454_1014493022	3300004081	Soil	MADTDGANSNCPVCKLPVGESKHFCHLCRAAGRDIRFDSEPCGAEHLTKTHTQEEIDRFDAAQSTTSKP*
Ga0062589_1001717742	3300004156	Soil	MADANTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP*
Ga0062589_1009204172	3300004156	Soil	MADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG*
Ga0062589_1024204142	3300004156	Soil	MADTNCPVCKLPIGESKHFCHLCRAAGRDVRFDSETCGADHLVKTHTQEEIDRFDAAQTRTKG*
Ga0063356_1000487493	3300004463	Arabidopsis Thaliana Rhizosphere	MWVLWGPMADKNVNCPICQLPIGESKHFCHLCRAAGHEVRFDSGPCEAEHLTKVHSQDEIDRFDSAKTQTIPKP*
Ga0063356_1019322751	3300004463	Arabidopsis Thaliana Rhizosphere	MTTVNPNECPICHLPVADNKHICHLCKAAGREVRFDSGPCEAEHMAKAHTVDELEHFDA
Ga0063356_1055092641	3300004463	Arabidopsis Thaliana Rhizosphere	MAETNANCPICQLPIGESKHFCHLCKANGREVRFDSGPCEAEHMSKNHTVDEIEHFDAAKTQTINKP*
Ga0062595_1002099983	3300004479	Soil	MADTNTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP*
Ga0066395_100022376	3300004633	Tropical Forest Soil	VEYSPRMADATTAGPSCPICRRPVGDSKHFCHLCRANGRDVRFDTGRCEAEHLATMHTHEEIERFDAAQTIKN*
Ga0062594_1001798302	3300005093	Soil	MTTANPNECPICHLPVADNKHICHLCKAAGREVRFDSGPCEAEHMEKAHTVEELEHFDAAKTMTKP*
Ga0062594_1011934162	3300005093	Soil	WIVMGATDQPNTECPVCKLPVADNKHVCHLCRAAGREVRFDSGPCEAEHVEKSHTVEEIERFDAAQTITK*
Ga0062594_1023500892	3300005093	Soil	MADKNVNCPICQLPIGESKHFCHLCRAAGHEVRFDSGPCEAEHLTKVHSQDEIDRFDSAKTQTITKP*
Ga0066671_104337931	3300005184	Soil	CKLPVGESKHFCHLCRAAGRDILFDSEQCGAEHLVKSHTQDEIDRFDAAQTTTTIKP*
Ga0070683_1000216075	3300005329	Corn Rhizosphere	MADANTNCPVCKLPVGESKHFCHLCRAAGRDVRFDSETCGADHLIKTHTQEEIDRFDAAQTTIKP*
Ga0070683_1002526931	3300005329	Corn Rhizosphere	MADSKTAGLNCPICQLPIGETKHYCHLCRANGRDIRFDSGPCEAEHLSKEHTQEEIEEFDAAQTIKVRVDDL*
Ga0070683_1003719703	3300005329	Corn Rhizosphere	MADTKSAGPSCPICSLPVGDSKFVCHLCRANGQVVRFDSGPCEAEHLSKAHTQEEIENFDAAQTIKVRVDDL*
Ga0070683_1023281412	3300005329	Corn Rhizosphere	MADTNCPVCKLPIGESKHFCHLCRAAGRDVRFDSETCGADHLVKTHTQEEIDRFDAAQT
Ga0070670_1000064886	3300005331	Switchgrass Rhizosphere	MSDAANSGPACPVCRLPVADSKFVCHLCRADGKEVRFDSGPCEAEHLEKAHTVEEVERFDAAKTIAK*
Ga0070670_1005955282	3300005331	Switchgrass Rhizosphere	MEYPPRMAEPNTSCPICKLPIGDNKFFCHLCKAKGLDVRFDSGPCEAEHLTKTHTVEEIEHFDSARTQTIVKP*
Ga0066388_1029730542	3300005332	Tropical Forest Soil	MAETESSGPPCPICKLPVVDSKHICHLCKTNGRDVRFDSGPCEAEHLTKAHTPEEIERFDAAQTIKQ*
Ga0068869_1011641062	3300005334	Miscanthus Rhizosphere	MADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP*
Ga0070666_110870551	3300005335	Switchgrass Rhizosphere	MADANTNCPVCKLPVGESKHFCHLCRAAGRDIRFDSEQCGAEHLIKTHTQEEIDRFDAAQTTSKP*
Ga0070689_1001242914	3300005340	Switchgrass Rhizosphere	MADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVERFDVEQTIRKG*
Ga0070689_1008983262	3300005340	Switchgrass Rhizosphere	MADANTNCPVCKLPVGESKHFCHLCRAAGRDVRFDSETCGADHLIKTHTQEEIDRFDA
Ga0070691_107998102	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	YARVMADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG*
Ga0070675_1013057182	3300005354	Miscanthus Rhizosphere	MSDAANSGPACPVCRLPVADSKFVCHLCRANGKDVRFDSGPCEAEHLEKAHTVEEVERFDAAKTIAK*
Ga0070671_1001195645	3300005355	Switchgrass Rhizosphere	MADTNTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKP*
Ga0070671_1010241042	3300005355	Switchgrass Rhizosphere	MADTKGANANCPVCKLPVGDSKHFCHLCRAAGREIRFDSEPCGAEHLTKTHTQDEIDSFDAAQTTSIKL*
Ga0070674_1018601541	3300005356	Miscanthus Rhizosphere	VCKLPVGESKHFCHLCRAAGRDIRFDSEQCGAEHLIKTHTQEEIDRFDAAQTTSKP*
Ga0070673_1000230832	3300005364	Switchgrass Rhizosphere	MSDAANSGPACPVCRLPVADSKFVCHLCRANGRDVRFDSGPCEAEHLEKAHTVEEVERFDAAKTIAK*
Ga0070709_106024541	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SAGPSCPICSLPVGDSKFVCHLCRANGQVVRFDSGPCEAEHLSKAHTQEEIENFDAAQTIKVRVDDL*
Ga0070701_110027082	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	SGPRGANVLRPARSQRWYARVMADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG*
Ga0070705_1013326531	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLEKAHTVEEVERFDAA
Ga0070678_1018363262	3300005456	Miscanthus Rhizosphere	CPICHLPVADNKHICHLCKAAGREVRFDSGPCEAEHMEKAHTVEELEHFDAAKTINKP*
Ga0070662_1001428324	3300005457	Corn Rhizosphere	MADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVERFDVEQ
Ga0070681_100513666	3300005458	Corn Rhizosphere	MADSKTAGLNCPVCQLPIGETKHYCHLCRANGRDIRFDSGPCEAEHLSKEHTQEEIEEFDAAQTIKVRVDDL*
Ga0070685_115112762	3300005466	Switchgrass Rhizosphere	MTTANPNECPICHLPVVDNKHICHLCKAAGREVRFDSGPCEAEHMEKAHTVEELEHFDAAKTINKP*
Ga0070684_1021021381	3300005535	Corn Rhizosphere	MAESKTAGLTCPICQLPIGETRHFCHLCWANGREVCFDSGPCEAEHLSKAHTQEEIENFDAAQTIKVRVDDL*
Ga0070686_1006868471	3300005544	Switchgrass Rhizosphere	NTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP*
Ga0068856_1012537952	3300005614	Corn Rhizosphere	MGDPKKPVLSCPICQLPVGDSKFICHLCRANGHEVRFDSGPCEAEHLAKTHTVEEIENFDAAQTIKVKVDDI*
Ga0068864_1006768652	3300005618	Switchgrass Rhizosphere	MAEAKAAGPNCPICQLPVGESKHFCHLCRANGSEVRFDSGPCEAEHMRKSHTEEEIEHFDAAQTIKVHIDDI*
Ga0068864_1026104511	3300005618	Switchgrass Rhizosphere	REVKASLQLVPGRTTPPPQRWYCRRMADANTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP*
Ga0066903_1000284001	3300005764	Tropical Forest Soil	ADATTAGPSCPICRRPVGDSKHFCHLCRANGRDVRFDTGRCEAEHLATMHTHEEIERFDAAQTIKN*
Ga0066903_1071901782	3300005764	Tropical Forest Soil	MADSKNAGPACPICSLPVGESRHFCHLCKANGHEVRFDSGPCEAEHLTKAHTAEEIEHFDAAQ
Ga0068860_1019331973	3300005843	Switchgrass Rhizosphere	NCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG*
Ga0066652_1017713181	3300006046	Soil	RLPVADSKFVCHLCRAKGREVRFDSGPCEAEHLSKVHTEEEIEHFDAARTQTINKP*
Ga0066652_1017811452	3300006046	Soil	RASSTLPAMADAKTAGPSCPICRRPVGDSQHFCFLCRASGRDVRFDSGRCEAEHLATMHTHEEVERFDAAQTIKN*
Ga0075422_101558243	3300006196	Populus Rhizosphere	GPHMTTVNPNECPICHLPVADNKHICHLCKAAGREVRFDSGPCEAEHMSKEHTVEELEHFDAAKTIAKP*
Ga0101568_106747882	3300006623	Soil	MGNTNCPVCKLPVGESKHFCHLCRAAGRDIQFDSGPCEAEHLTKTHTQDEIDRFDAAQTTSKP*
Ga0068865_1003496273	3300006881	Miscanthus Rhizosphere	MADANTNCPVCKLPVGESKHFCHLCRAAGRDIRFDSEQCGAEHLMKTHTQEEIDRFDAAQTTSKP*
Ga0111539_100055699	3300009094	Populus Rhizosphere	MTTVNPNECPICHLPVADNKHICHLCKAAGREVRFDSGPCEAEHMSKEHTVEELEHFDAAKTIAKP*
Ga0066709_1017288051	3300009137	Grasslands Soil	MADTEEANSNCPVCKLPVGESKHFCHLCRAAGRNIRFDSEPCGAEHLTKAHTQEEIDRFDAAQTTSTE*
Ga0111538_100206799	3300009156	Populus Rhizosphere	MTTVNPNECPICHLPVADNKHICHLCKAAGREVRFDSGLCEAEHMSKEHTVEELEHFDAAKTIAKP*
Ga0126377_126192581	3300010362	Tropical Forest Soil	MADTNTNCPVCKLPVGDSKFRCHLCRAAGKDVRFDSGPCEAEHLTKAHTQAEVERFDVEQTIRKP*
Ga0126383_100381172	3300010398	Tropical Forest Soil	MADATTAGPSCPICRRPVGDSKHFCHLCRANGRDVRFDTGRCEAEHLATMHTHEEIERFDAAQTIKN*
Ga0134123_108106433	3300010403	Terrestrial Soil	RMADANTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP*
Ga0134123_123718202	3300010403	Terrestrial Soil	MADTNTNCPICKLPVGESKFRCHLCRAAGRDVRFDSGPCEAEHLTKAHTQAEIERFDVEQTIRKP*
Ga0137326_11399381	3300011417	Soil	MTTANPNECPICHLPVVDNKHICHLCKAAGREVRFDSGPCEAEHMAKAHTIDELEHFDAAKTIITKP*
Ga0137428_12276322	3300011432	Soil	MTTANPNECPICHLPVADNKHICHLCKAAGREVRFDSGPCEAEHMAKAHTIDELEHFDAAKTIITKP*
Ga0137465_10622343	3300012231	Soil	MTSANPNECPICHLPVVDNKHICHLCKAAGREIRFDSGPCEAEHMSKAHTIEELEHFDAAKTMTKP*
Ga0137366_1001625115	3300012354	Vadose Zone Soil	MADTEGANSNCPVCKLPVGESKHFCHLCRAAGRDIRFDSEPCGAEHLTKAHTQEEIDRFDAAQTSSTG*
Ga0157308_102042182	3300012910	Soil	MSDAANSGPACPVCRLPVADSKFVCHLCRANGRDVRFDSGPCEAEHLEKAHTVEELEHFDAAKTINKP*
Ga0157297_100675283	3300012914	Soil	MSDAANSGPACPVCRLPVADSKFVCHLCRANGRDVRFDSGPCEAEHLEKAHTVEEVERFDAAIER
Ga0164298_100698984	3300012955	Soil	ANANCPVCKLPVGESKHFCHLCRAAGRDIRFDSEPCGAEHLVKTHTQDEIDRFDAAQTTSKP*
Ga0164302_106721973	3300012961	Soil	MADTNCPVCKLPIGESKHFWHLCRAAGRDVRFDSETCGADHLVKTHTQEEIDRFDAAQTRTKG*
Ga0157378_118423591	3300013297	Miscanthus Rhizosphere	MADANTNCPVCKLPVGESKFICHLCRAAGREVRFASGPCEAEHLTKAHSQAEIDRFDVEQTIRKP*
Ga0075351_10121333	3300014318	Natural And Restored Wetlands	MADTNTNCPVCKLPVGDSKFRCHLCRAAGKDVRFDSGPCEAEHLTKAHTKAEIERFDVEQTIRKP*
Ga0157380_109009652	3300014326	Switchgrass Rhizosphere	MADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDV
Ga0157377_105712512	3300014745	Miscanthus Rhizosphere	MTTANPNECPICHLPVSDNKHICHLCKAAGREIRFDSGPCEAEHMSKAHTVEELEHFDAAKTINKP*
Ga0157376_122082441	3300014969	Miscanthus Rhizosphere	MGDPKKPVLSCPICQLPVGDSKFICHLCRANGHEVRFDSGPCEAEHLAKTHTVE
Ga0132258_1001299213	3300015371	Arabidopsis Rhizosphere	MTASQGSGSDCPVCKLPVGDSKFVCHLCRANGREVRFDSGPCEAEHLSKMHTQEEVERFDAAKTIAKP*
Ga0132258_100332171	3300015371	Arabidopsis Rhizosphere	CPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG*
Ga0132258_107149882	3300015371	Arabidopsis Rhizosphere	MAEKNADCPICQLPIGESKHFCHLCKANGREVRFDSGPCEAEHMSKAHTTDEIEHFDAAKTQTINKP*
Ga0132258_111101364	3300015371	Arabidopsis Rhizosphere	MPQSPNTTCPVCQLPVADNRHICHLCKAKGLDVRFDSGPCEAEHMEKLHTVEEMEDFDAAQTIITKP*
Ga0132258_125402761	3300015371	Arabidopsis Rhizosphere	MADKNANCPICQLPIGESKHFCHLCRAAGHEIRFDSGPCEAEHLMKVHTQDEIDRFDSAKTQTIPKP*
Ga0132255_1000485597	3300015374	Arabidopsis Rhizosphere	MADTNTNCPVCKLPVGESKFICHLCQAAGRDVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG*
Ga0132255_1018302472	3300015374	Arabidopsis Rhizosphere	MAETNANCPICQLPIGESKHFCHLCKANGQEVRFDSGPCEAEHMSKTHTTDEIEHFDAAKTQTINKP*
Ga0184611_11922142	3300018067	Groundwater Sediment	MSDAANSGPACPVCRLPVADSKFVCHLCRANGKEVRFDSGPCEAEHVEKAHTVEEVERFDAAKTIAK
Ga0184625_100341512	3300018081	Groundwater Sediment	MGATDQPNTECPVCKLPVADNKHVCHLCRAAGREVRFDSGPCEAEHMEKAHTVEELERFDAAQTITK
Ga0184628_100355843	3300018083	Groundwater Sediment	MTTANPNECPICHLPVADNKHICHLCKAAGREIRFDSGPCEAEHMSKAHTVEELEHFDAAKTINKP
Ga0184628_102599232	3300018083	Groundwater Sediment	MADTNANCPVCKLPIGESKFICHLCKASGRDVRFDSGPCEAEHLTKAHTADEIEHFDAAKTISKP
Ga0190270_112011942	3300018469	Soil	MSDAANPGPACPVCRLPVADSKFVCHLCRANGKEVRFDSGPCEAEHLEKAHTVEEIEHFDAAQTIAK
Ga0190271_128941681	3300018481	Soil	LIVMGATDQPNTECPVCKLPVADNKHVCHLCRAAGREIRFDSGPCEAEHMEKAHTVEELERFDAAQTITK
Ga0173482_105705572	3300019361	Soil	MADANTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP
Ga0173482_107898851	3300019361	Soil	MADTNCPVCKLPIGESKHFCHLCRAAGRDVRFDSETCGADHLVKTHTQEEIDR
Ga0193697_10315442	3300020005	Soil	MGATDQPNTECPVCKLPVADNKHVCHLCRAAGREVRFDSGPCEAEHMEKAHTVEELERFDAAKTITK
Ga0222622_100831053	3300022756	Groundwater Sediment	MAETNANCPICQLPIGESKHFCHLCKANGREVRFDSGPCEAEHMSKSHTTDEIEHFDAAKTQTINKP
Ga0247672_10057963	3300024187	Soil	MGDTKTAGPDCPVCKLPIGEAKHVCHLCRAAGREVRFDSGPCEAEHLSKAHTQAEIDRFDAAQTIGKP
Ga0207666_10244391	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	CPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG
Ga0207697_102039151	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MADANTNCPVCKLPVGESKHFCHLCRAAGRDIRFDSEQCGAEHLMKTHTQEEIDRFDAAQTTSKP
Ga0207697_105602061	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MTTANPNECPICHLPVSDNKHICHLCKAAGREIRFDSGPCEAEHMSKAHTVEELEHFDAAKTINKP
Ga0207642_100398953	3300025899	Miscanthus Rhizosphere	MADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG
Ga0207680_106846601	3300025903	Switchgrass Rhizosphere	MADANTNCPVCKLPVGESKHFCHLCRAAGRDIRFDSEQCGAEHLIKTHTQEEIDRFDAAQTTSKP
Ga0207699_113487031	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ADTKSAGPSCPICSLPVGDSKFVCHLCRANGQVVRFDSGPCEAEHLSKAHTQEEIENFDAAQTIKVRVDDL
Ga0207707_101914384	3300025912	Corn Rhizosphere	MADSKTAGLNCPVCQLPIGETKHYCHLCRANGRDIRFDSGPCEAEHLSKEHTQEEIEEFDAAQTIKVRVDDL
Ga0207649_111101952	3300025920	Corn Rhizosphere	MADANTNCPVCKLPVGESKHFCHLCRAAGRDVRFDSETCGADHLIKTHTQEEIDRFDAAQTTIKP
Ga0207650_100856756	3300025925	Switchgrass Rhizosphere	MSDAANSGPACPVCRLPVADSKFVCHLCRANGKEVRFDSGPCEAEHLEKAHTVEEVERFDAAKTIAK
Ga0207650_103776202	3300025925	Switchgrass Rhizosphere	MEYPPRMAEPNTSCPICKLPIGDNKFFCHLCKAKGLDVRFDSGPCEAEHLTKTHTVEEIEHFDSARTQTIVKP
Ga0207659_100839323	3300025926	Miscanthus Rhizosphere	MTTANPNECPICHLPVVDNKHICHLCKAAGREVRFDSGPCEAEHMEKAHTVEELEHFDAAKTINKP
Ga0207659_117990072	3300025926	Miscanthus Rhizosphere	SVMSDAANSGPACPVCRLPVADSKFVCHLCRANGKDVRFDSGPCEAEHLEKAHTVEEVERFDAAKTIAK
Ga0207701_100701543	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MADKNVNCPICQLPIGESKHFCHLCRAAGHEVRFDSGPCEAEHLTKVHSQDEIDRFDSAKTQTITKP
Ga0207701_113778052	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TPPPQRWYCRRMADANTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP
Ga0207644_109712362	3300025931	Switchgrass Rhizosphere	MADTKGANANCPVCRLPVGDSKHFCHLCRAAGREIRFDSEPCGAEHLTKTHTQDEIDSFDAAQTTSIKL
Ga0207644_115277622	3300025931	Switchgrass Rhizosphere	MADTNCPVCKLPIGESKHFCHLCRAAGRDVRFDSETCGADHLVKTHTQEEIDRFDAAQTRTKG
Ga0207704_115023401	3300025938	Miscanthus Rhizosphere	KNVNCPICQLPIGESKHFCHLCRAAGHEVRFDSGPCEAEHLTKVHSQDEIDRFDSAKTQTITKP
Ga0207691_105097542	3300025940	Miscanthus Rhizosphere	MSDAANSGPACPVCRLPVADSKFVCHLCRANGRDVRFDSGPCEAEHLEKAHTVEEVERFDAAKTIAK
Ga0207661_112200352	3300025944	Corn Rhizosphere	MADTNCPVCKLPIGESKHFCHLCRAAGRDVRFDSETCGADHLVKTHTQEEIDRVLPMAH
Ga0207661_117362642	3300025944	Corn Rhizosphere	MADSKTAGLNCPICQLPIGETKHYCHLCRANGRDIRFDSGPCEAEHLSKEHTQEEIEEFDAAQTIKVRVDDL
Ga0207651_105682191	3300025960	Switchgrass Rhizosphere	MGATDQPNTECPVCKLPVADDKHICHLCRAAGRQVRFDSGPCEAEHMEKAHTVEELERFDAAQTISK
Ga0207658_107799872	3300025986	Switchgrass Rhizosphere	MADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP
Ga0208658_10232322	3300026047	Natural And Restored Wetlands	MADTNTNCPVCKLPVGDSKFRCHLCRAAGKDVRFDSGPCEAEHLTKAHTKAEIERFDVEQTIRKP
Ga0207702_105359501	3300026078	Corn Rhizosphere	AGLNCPICQLPIGEARHFCHLCRANGREVRFDSGPCEAEHLSKEHTQEEIEEFDAAQTIKVRVDDL
Ga0207702_110346412	3300026078	Corn Rhizosphere	MGDPKKPVLSCPICQLPVGDSKFICHLCRANGHEVRFDSGPCEAEHLAKTHTVEEIENFDAAQTIKVKVDDI
Ga0207702_119029721	3300026078	Corn Rhizosphere	MADANTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDV
Ga0207674_116841671	3300026116	Corn Rhizosphere	VHSSRSQRWYARIMADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG
Ga0207675_1018656401	3300026118	Switchgrass Rhizosphere	VKASLQLVPGRTTPPPQRWYCRRMADANTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP
Ga0209465_100065032	3300027874	Tropical Forest Soil	VEYSPRMADATTAGPSCPICRRPVGDSKHFCHLCRANGRDVRFDTGRCEAEHLATMHTHEEIERFDAAQTIKN
Ga0207428_100635435	3300027907	Populus Rhizosphere	MTTVNPNECPICHLPVADNKHICHLCKAAGREVRFDSGPCEAEHMSKEHTVEELEHFDAAKTIAKP
Ga0247663_10855812	3300028145	Soil	PDCPVCKLPIGEAKHVCHLCRAAGREVRFDSGPCEAEHLSKAHTQAEIDRFDAAQTIGKP
Ga0268266_111764762	3300028379	Switchgrass Rhizosphere	MSDAANSGPACPVCRLPVADSKFVCHLCRANGRDVRFDSGPCEAEHLTKAHSQAEIDRFDVEQTIRKP
Ga0247818_113795111	3300028589	Soil	YARVMADTNTTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG
Ga0307280_100027264	3300028768	Soil	MAQTEGANSNCPVCKLPVGESKHFCHLCRAAGRDIRFDSEPCGADHLVKTHTQDEIDRFDAAQTTSKP
Ga0307296_106997732	3300028819	Soil	MADTEGANSNCPVCKLPVGESKHFCHLCRAAGRDIRFDSEPCGAEHLVKSHTQDE
Ga0247826_116955612	3300030336	Soil	LTTPNTKCPICQLPVDDNKHVCHLCKAKGRDIRFDSGPCEAEHMSKEHTVEEIELFDAAKTIRKL
Ga0310887_109271261	3300031547	Soil	ECPICKLPVADNKHVCHLCRAAGREVRFDSGPCEAEHVEKVHTVEEIEEFDAAKTIRKL
Ga0310892_100710411	3300031858	Soil	VTSGPHGANVLRPARSQRWYARVMADTNTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVERFDVEQTIRKG
Ga0310903_105139222	3300032000	Soil	ANPNECPICHLPVTDNKHICHLCKAAGREVRFDSGPCEAEHMSKAHTVEELEHFDAAKTISKP
Ga0307416_1009183941	3300032002	Rhizosphere	FPRAIGYSRTMAETNANCPICQLPIGESKHFCHLCKANGREVRFDSGPCEAEHMSKTHTVDEIEHFDAAKTQTINKP
Ga0310897_105439552	3300032003	Soil	ANVLRPARSQRWYARVMADTNTNCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG
Ga0310902_101361371	3300032012	Soil	RWSPYHSTCPVCKLPVGESKFICHLCRAAGREVRFDSGPCEAEHLTKAHTQAEVDRFDVEQTIRKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061029

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences