NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F060958

Metagenome / Metatranscriptome Family F060958

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F060958
Family Type Metagenome / Metatranscriptome
Number of Sequences 132
Average Sequence Length 77 residues
Representative Sequence MSAREIQDQKAIAREMFVQQAAHANADVSASPLRGATICSTKSRRDYTLESTADEFCEAADTSLLPVIRVDAANLMRV
Number of Associated Samples 105
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 97.73 %
% of genes from short scaffolds (< 2000 bps) 90.91 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.424 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(24.242 % of family members)
Environment Ontology (ENVO) Unclassified
(39.394 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(64.394 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.53%    β-sheet: 0.00%    Coil/Unstructured: 75.47%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 132 Family Scaffolds
PF12680SnoaL_2 25.76
PF16925TetR_C_13 7.58
PF00440TetR_N 2.27
PF13977TetR_C_6 0.76
PF03551PadR 0.76
PF11949DUF3466 0.76
PF00561Abhydrolase_1 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 132 Family Scaffolds
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.76
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.76
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.76


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.42 %
UnclassifiedrootN/A7.58 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000903|JGI11872J12872_101689All Organisms → cellular organisms → Bacteria → Acidobacteria700Open in IMG/M
3300001082|JGI12664J13189_1001857All Organisms → cellular organisms → Bacteria → Acidobacteria2441Open in IMG/M
3300001087|JGI12677J13195_1002230All Organisms → cellular organisms → Bacteria → Acidobacteria1919Open in IMG/M
3300001167|JGI12673J13574_1007487All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300001170|JGI12704J13340_1012435All Organisms → cellular organisms → Bacteria → Acidobacteria684Open in IMG/M
3300001648|JGI20242J16303_101861All Organisms → cellular organisms → Bacteria → Acidobacteria1066Open in IMG/M
3300002245|JGIcombinedJ26739_100146222All Organisms → cellular organisms → Bacteria → Acidobacteria2233Open in IMG/M
3300002245|JGIcombinedJ26739_100544769All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1037Open in IMG/M
3300004082|Ga0062384_101223748All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300004092|Ga0062389_101485774All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300004635|Ga0062388_100798990All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli894Open in IMG/M
3300004635|Ga0062388_102841396All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300005439|Ga0070711_101144176All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300005541|Ga0070733_10156962All Organisms → cellular organisms → Bacteria1478Open in IMG/M
3300005541|Ga0070733_11235957Not Available500Open in IMG/M
3300005542|Ga0070732_10296416All Organisms → cellular organisms → Bacteria → Acidobacteria971Open in IMG/M
3300005542|Ga0070732_10356398All Organisms → cellular organisms → Bacteria → Acidobacteria881Open in IMG/M
3300005602|Ga0070762_10300859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1011Open in IMG/M
3300005610|Ga0070763_10618876All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300005921|Ga0070766_10888990All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300006354|Ga0075021_10912413All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300009038|Ga0099829_11379358All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300009090|Ga0099827_10860573All Organisms → cellular organisms → Bacteria → Acidobacteria785Open in IMG/M
3300009616|Ga0116111_1059946All Organisms → cellular organisms → Bacteria → Acidobacteria1063Open in IMG/M
3300009792|Ga0126374_10601450All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300010046|Ga0126384_10200656All Organisms → cellular organisms → Bacteria → Acidobacteria1579Open in IMG/M
3300010358|Ga0126370_11083268All Organisms → cellular organisms → Bacteria → Acidobacteria737Open in IMG/M
3300010361|Ga0126378_10581228All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300010361|Ga0126378_11429661All Organisms → cellular organisms → Bacteria → Acidobacteria783Open in IMG/M
3300010361|Ga0126378_12466599All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300010361|Ga0126378_12947578All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300010376|Ga0126381_100036469All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5922Open in IMG/M
3300010398|Ga0126383_10113062All Organisms → cellular organisms → Bacteria → Acidobacteria2455Open in IMG/M
3300010398|Ga0126383_13690711Not Available500Open in IMG/M
3300010859|Ga0126352_1237388All Organisms → cellular organisms → Bacteria → Acidobacteria880Open in IMG/M
3300011271|Ga0137393_11171697All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300012189|Ga0137388_11374334All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300012201|Ga0137365_10479759All Organisms → cellular organisms → Bacteria → Acidobacteria915Open in IMG/M
3300012351|Ga0137386_11226931All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300012361|Ga0137360_10928974All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300012362|Ga0137361_10624698All Organisms → cellular organisms → Bacteria → Acidobacteria986Open in IMG/M
3300012683|Ga0137398_11132229All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300012924|Ga0137413_11176060All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300014501|Ga0182024_10029322All Organisms → cellular organisms → Bacteria9524Open in IMG/M
3300016750|Ga0181505_10975088All Organisms → cellular organisms → Bacteria → Proteobacteria2031Open in IMG/M
3300017943|Ga0187819_10328929All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300017943|Ga0187819_10333589All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300017946|Ga0187879_10770387All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300017972|Ga0187781_11331467Not Available530Open in IMG/M
3300018007|Ga0187805_10081648All Organisms → cellular organisms → Bacteria1457Open in IMG/M
3300018007|Ga0187805_10223237All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300018024|Ga0187881_10426537All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300018025|Ga0187885_10403692All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300018047|Ga0187859_10487363All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300020581|Ga0210399_10224546All Organisms → cellular organisms → Bacteria1564Open in IMG/M
3300020581|Ga0210399_10669649All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300020582|Ga0210395_10570148All Organisms → cellular organisms → Bacteria → Acidobacteria850Open in IMG/M
3300020582|Ga0210395_11344328All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300021170|Ga0210400_10503812All Organisms → cellular organisms → Bacteria → Acidobacteria999Open in IMG/M
3300021170|Ga0210400_10674562All Organisms → cellular organisms → Bacteria → Acidobacteria850Open in IMG/M
3300021180|Ga0210396_10258540All Organisms → cellular organisms → Bacteria → Acidobacteria1547Open in IMG/M
3300021180|Ga0210396_10540240All Organisms → cellular organisms → Bacteria → Acidobacteria1017Open in IMG/M
3300021180|Ga0210396_10716195All Organisms → cellular organisms → Bacteria → Acidobacteria863Open in IMG/M
3300021181|Ga0210388_10823323All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300021181|Ga0210388_11593656All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300021402|Ga0210385_10881276All Organisms → cellular organisms → Bacteria → Acidobacteria687Open in IMG/M
3300021403|Ga0210397_11172045All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300021404|Ga0210389_11414556All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300021407|Ga0210383_11732758All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300021432|Ga0210384_10321538All Organisms → cellular organisms → Bacteria → Acidobacteria1393Open in IMG/M
3300021433|Ga0210391_10159881All Organisms → cellular organisms → Bacteria1774Open in IMG/M
3300021477|Ga0210398_10304023All Organisms → cellular organisms → Bacteria → Acidobacteria1301Open in IMG/M
3300021477|Ga0210398_10967960All Organisms → cellular organisms → Bacteria → Acidobacteria680Open in IMG/M
3300021560|Ga0126371_11724900All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300022501|Ga0242645_1018179All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300022508|Ga0222728_1041410All Organisms → cellular organisms → Bacteria → Acidobacteria748Open in IMG/M
3300022525|Ga0242656_1021866All Organisms → cellular organisms → Bacteria → Acidobacteria962Open in IMG/M
3300022525|Ga0242656_1142923All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300022721|Ga0242666_1109961All Organisms → cellular organisms → Bacteria → Acidobacteria644Open in IMG/M
3300022724|Ga0242665_10145520All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300022730|Ga0224570_109781All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300024225|Ga0224572_1048544All Organisms → cellular organisms → Bacteria → Acidobacteria793Open in IMG/M
3300024271|Ga0224564_1004875All Organisms → cellular organisms → Bacteria2083Open in IMG/M
3300025916|Ga0207663_11514134All Organisms → cellular organisms → Bacteria → Acidobacteria540Open in IMG/M
3300025928|Ga0207700_10017481All Organisms → cellular organisms → Bacteria → Proteobacteria4791Open in IMG/M
3300026355|Ga0257149_1058063All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300026467|Ga0257154_1073766All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300026551|Ga0209648_10488417All Organisms → cellular organisms → Bacteria → Acidobacteria726Open in IMG/M
3300026551|Ga0209648_10696387All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300026551|Ga0209648_10765366All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300027010|Ga0207839_1022608All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300027073|Ga0208366_1036086Not Available554Open in IMG/M
3300027604|Ga0208324_1126969All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300027648|Ga0209420_1009968All Organisms → cellular organisms → Bacteria → Proteobacteria3432Open in IMG/M
3300027676|Ga0209333_1155541All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300027842|Ga0209580_10329383All Organisms → cellular organisms → Bacteria → Acidobacteria761Open in IMG/M
3300027855|Ga0209693_10423946All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300027862|Ga0209701_10682273All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300028047|Ga0209526_10116642All Organisms → cellular organisms → Bacteria → Proteobacteria1876Open in IMG/M
3300028759|Ga0302224_10466228Not Available516Open in IMG/M
3300028863|Ga0302218_10138707All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300029701|Ga0222748_1140981Not Available501Open in IMG/M
3300029910|Ga0311369_10064868All Organisms → cellular organisms → Bacteria3873Open in IMG/M
3300029943|Ga0311340_10475094All Organisms → cellular organisms → Bacteria → Proteobacteria1125Open in IMG/M
3300029944|Ga0311352_10606842All Organisms → cellular organisms → Bacteria → Acidobacteria873Open in IMG/M
3300029944|Ga0311352_11397017All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300030053|Ga0302177_10502709All Organisms → cellular organisms → Bacteria → Acidobacteria626Open in IMG/M
3300030520|Ga0311372_11501312All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300030524|Ga0311357_10913745All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300030605|Ga0210265_1141209Not Available542Open in IMG/M
3300030730|Ga0307482_1051296All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300030854|Ga0075385_11552319All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300030937|Ga0138302_1067716Not Available565Open in IMG/M
3300030991|Ga0073994_12191835All Organisms → cellular organisms → Bacteria → Acidobacteria1066Open in IMG/M
3300031122|Ga0170822_12795685All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300031231|Ga0170824_116443651All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300031474|Ga0170818_103676432All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300031708|Ga0310686_112525801Not Available634Open in IMG/M
3300031708|Ga0310686_117964454All Organisms → cellular organisms → Bacteria → Acidobacteria1115Open in IMG/M
3300031715|Ga0307476_10028420All Organisms → cellular organisms → Bacteria3696Open in IMG/M
3300031715|Ga0307476_10775137All Organisms → cellular organisms → Bacteria → Acidobacteria709Open in IMG/M
3300031718|Ga0307474_10616918All Organisms → cellular organisms → Bacteria → Acidobacteria855Open in IMG/M
3300031754|Ga0307475_10659825All Organisms → cellular organisms → Bacteria → Acidobacteria835Open in IMG/M
3300031754|Ga0307475_11286723Not Available567Open in IMG/M
3300031754|Ga0307475_11402014All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300031823|Ga0307478_10237475All Organisms → cellular organisms → Bacteria → Acidobacteria1477Open in IMG/M
3300031823|Ga0307478_10620320All Organisms → cellular organisms → Bacteria → Acidobacteria905Open in IMG/M
3300031823|Ga0307478_11293260All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300032261|Ga0306920_100106632All Organisms → cellular organisms → Bacteria4150Open in IMG/M
3300032515|Ga0348332_13967465All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300032895|Ga0335074_11407346All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300033829|Ga0334854_015152All Organisms → cellular organisms → Bacteria → Acidobacteria1868Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil24.24%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil9.09%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.33%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.33%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.58%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.82%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.79%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.79%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.03%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.03%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.27%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.27%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.27%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.52%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.76%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.76%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.76%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.76%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.76%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.76%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.76%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.76%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000903Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1EnvironmentalOpen in IMG/M
3300001082Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3EnvironmentalOpen in IMG/M
3300001087Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3EnvironmentalOpen in IMG/M
3300001167Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2EnvironmentalOpen in IMG/M
3300001170Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2EnvironmentalOpen in IMG/M
3300001648Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010859Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022501Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022730Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2Host-AssociatedOpen in IMG/M
3300024225Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5Host-AssociatedOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026467Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027010Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)EnvironmentalOpen in IMG/M
3300027073Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)EnvironmentalOpen in IMG/M
3300027604Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028863Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030605Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE042SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030854Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030937Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300033829Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11872J12872_10168933300000903Forest SoilMSAREIQDQKAIALEMMVQQAAHANADVSASPLPGDTISSIKSRRDCTLASKAEHRFYEPVDTSLLPVTRVDAANLI
JGI12664J13189_100185743300001082Forest SoilMSAREIQDQKAIEHEMFVQRAAHANADVEASPLRGATICSTKSGRDYILEPTADRFCEAADTSSLPVIRIA
JGI12677J13195_100223043300001087Forest SoilMSVREIQDQRTIAPEMFVQQAAHANADASAIPLRGATICSTKSRRDYTLESTADDFHEAAGASLLPVSRAD
JGI12673J13574_100748723300001167Forest SoilMSGPKIQDQKAIAREMFVQQAAHANGDVSASPLPGDTICSIKSRRDYTLESKAEDGFYEPADTSLLPVTRVDAANLIRALQQLE
JGI12704J13340_101243523300001170Forest SoilMSAHEMQDQKPVAREMLVQQAAYTNADASATRPRGSGICSTESRRGYTLASTADEFCEAADASLLPVMGVDAEDF
JGI20242J16303_10186113300001648Forest SoilMSAREIQDQKTIAREMFVQQAAHANADVPASPLRGTAIYVTESGPAYSRESKADGFREAADTPLLPVNRVDAANLMRVLRQLEVI
JGIcombinedJ26739_10014622213300002245Forest SoilMSAREIQDQKAIEHEMFVQRAAHANADVEASPLRGATICSTKSGRDYILEPTADRFCEAADTSSLPVIR
JGIcombinedJ26739_10054476933300002245Forest SoilMSVREIQDQRTIAPEMFVQQAAHANADASAIPLRGATICSTKSRRDYTLESTADDFHEAAGASLLPVSRA
Ga0062384_10122374813300004082Bog Forest SoilMSGPKIQDQKAIAREMFVQQAAHANADVSASPLPGDTICSIKGRRGYTLESKAEDRFYEPADTSLLPVTRVDAANLIRALQQLEV
Ga0062389_10148577423300004092Bog Forest SoilMSICKIQELKAIAREMFVQQASASPSPRDTICSTVSKRVYTLESTAEDDFYEPADTPLLLVTRA
Ga0062388_10079899013300004635Bog Forest SoilMSAREIRDQKAIAREMFVRQAAHANAEVSASPTPGDAICSTKSKQGYTLESTAQDGFYEPVDTSLFPVTRVDAANLIRALQQLEV
Ga0062388_10284139623300004635Bog Forest SoilMSAREIQDQKTIARGMFVQQAAHANADVMASPLRGATICSTKRRRDYALESTADEFCETVDTSLLPVIRVDPANLM
Ga0070711_10114417623300005439Corn, Switchgrass And Miscanthus RhizosphereMSAREIQDQKTIAREMFVQQAVHVNADVSASPLRGATICSTKGRRDYILESTADEFCEAADTSLLPVIR
Ga0070733_1015696233300005541Surface SoilMAVETLVQQPAPANVDLSAGPRRGVAIRSAKSRRDYALELTGDEFCEAADTSLLSAIRVDATLMRVLH
Ga0070733_1123595723300005541Surface SoilMSTRKIQDQNAIARELLVQQAAHANGEVSASLPLGDAVCSIQNGREHTLEATAEDGFYEPIEPVDTSLLPVTRVDAANLI
Ga0070732_1029641613300005542Surface SoilMMAREIQDQKASAHEMFMPQVAPANEDVSASPMRGATIFSAKSRRDYALEPTAEGFCETADTALLPAIGVDTANFVRVLRQLE
Ga0070732_1035639823300005542Surface SoilMSTREIQDQKAIAREMFVQQAAHAKADVSASPLRGDTSRHDHTLESPAEDGIYELADTSLFPVTRVDAANLIRVLRR
Ga0070762_1030085913300005602SoilMSAREIQDEKVIAPEMFVHQAAYEGADVSVSPLRGATICFPKQRRHYTSGSTADELCEAADASLLPAIRADAT
Ga0070763_1061887613300005610SoilMSAREIQDQKTIAREMFVQQAARANADVLAGPLWGATIYPTESRQDYTRESTANEIHEAADASLPPVNRIDAANLMRVLRQLEV
Ga0070766_1088899013300005921SoilMSAREIQDQKAIAREMFLQQAAHANADVSASPVRRNTICSIKSRRDYTLESTAKDGFFERADTSLLPVTRIDAANLIRV
Ga0075021_1091241313300006354WatershedsMSVREIQDQKAIAREMFVQQATNTNADVLTRPLRGAAICSTKSRRNYALKSTADEFCEDAGTSLLPVIRVDAANLMRVLRRLEVI
Ga0099829_1137935813300009038Vadose Zone SoilMSTREIQDQKAIAREMFVQQAAHANADVSARPLREATICSTKSRRDYSLESTADEFCEAADTSLLPVIRVD
Ga0099827_1086057313300009090Vadose Zone SoilMSTREIQDQKAIAREMFVQQAAHANADVSARPLREATICSTKSRRDYSLESTADEFCEAADTSLLPVIRVDAANLMRVLRQL
Ga0116111_105994633300009616PeatlandMSAREIQDQKAIAHEMFVQQVAHANADVSASPPRGATICSTKSRRDYALESTADEFCEAADTSLLPVIGVDAA
Ga0126374_1060145023300009792Tropical Forest SoilMSAREIQDRKAMAREMFVQQAAHANVDGSASPLREATICSNKSRRNYTLESTADEFCEPADMSLLPVIRVDA
Ga0126384_1020065613300010046Tropical Forest SoilMSAREIQEQKDIAREMFVQQAAHPKVDVSAGPLPEAMICSTESGRNYAPESTADQLCEVPGTSLLPVIRVHAAHLMRVL
Ga0126370_1108326813300010358Tropical Forest SoilMSAREIQDEKAIAREMFVRQAAHADVEVSASPLRGATICSTKSRRDYTLESIAAEFCEASDTSLLPVIRIDAANLMRVL
Ga0126378_1058122823300010361Tropical Forest SoilMSARKIQDQKAIAREKFVQQAAHANADVSASSLRGDTICSIKSRRDYTLESTAEDGFYEPADTSLLPITRVDAANLTR
Ga0126378_1142966123300010361Tropical Forest SoilMSSREIQDQTAIAREMLGHQAAHADADVSASPLRGATIRSTKSRRDYTLESTADEFCEPADTSLLPVIRVDAANLMRVLR*
Ga0126378_1246659913300010361Tropical Forest SoilMSAREIPNQKAIAREMFVQQAAQANADVSASPLSVDTISSIKNRREYTLKSTAEDRFYEPADTSLLP
Ga0126378_1294757813300010361Tropical Forest SoilMSGREIQDQKAIAREMVAQQAANSKEDVSASPLPGATICSTKTEGDYALESTEAEFCEAADTSLPPVIRVDAA
Ga0126381_10003646913300010376Tropical Forest SoilMSTREIQDQKAIAREMLVQQVAHANADVSATPLRRATICTTKGERDYALESAADEFCEALDTSWFPVTQVGAANLMRVLRQL
Ga0126383_1011306243300010398Tropical Forest SoilMSTREIQDPKAIAREMFVQQAAHANTDVSASALRGDTIPSIKSRRDYALESTAENGLYEPADTSLLPVIRVDAA
Ga0126383_1369071113300010398Tropical Forest SoilMSAREIQDQKAITREMFVQQAAHANADVSASSRRGDTICSIKSRRDYTLESTADEFYEPADSLLPITRG
Ga0126352_123738813300010859Boreal Forest SoilMSVRAIQDQKTTAREMFVQQAAHANADVSASPLRAATICSTKSRHDYTLEPPANDFCEAADASLLPVIRVDAANLMRILR
Ga0137393_1117169713300011271Vadose Zone SoilMSAREIQDQKAIAREMFVQQAAHANADVSASPLRGATICSTKSRRDYTLESTADEFCEAADTSLLPVIRVDAANLMRV
Ga0137388_1137433413300012189Vadose Zone SoilMSAGKIQDQKAIAREMFVQQAAHANAEVSASPLRGATICSTKSRRDYTLESTADEFCEAADTSLLPVIRVDAANLMRVLRQLE
Ga0137365_1047975933300012201Vadose Zone SoilMSAREIQDQKAIALEMMVQQAAHANADVSASPLPGDTICSIKSRRDCTLESKAEDRFYEPADTSLLPATRVDAASLMRVLRQLEV
Ga0137386_1122693113300012351Vadose Zone SoilMSGHKIQAQKAIAREMFVQQAAHANGNVSGSPLPVDTICSIKSRRDYTLESTADEFCEAADTSLLPVIRVDAANVIRVLRQL
Ga0137360_1092897413300012361Vadose Zone SoilMSGPKIQDQKAIAREMFVQQAAHANGNVSASPLPVDTICSIKSRRDYTLESKAEDGFYEPTDASLLPTTRVDAANLI
Ga0137361_1062469833300012362Vadose Zone SoilMSGRKIEDQKAIAREMFVQQAAHPNGHVSASPLPVDTICSIKSRRDYTLESKAEDGFYEPTDASLLPT
Ga0137398_1113222913300012683Vadose Zone SoilMSAREIQDQKAIAREMFVQQATHANADVSASPLRGATICSTKSRRDYTLESTADEFCEAADTSLLPVIRVDAANLMRV
Ga0137413_1117606013300012924Vadose Zone SoilMSVSEIQDQKAIGREMFVQQADHANADVSASPLRGAPICSSKSKRDYTLELTADEFCEVADTSLLAVTRV
Ga0182024_1002932263300014501PermafrostMSAREIQDQKASAHEMFVPQVAPVSEDVSASPMRGATICSAKSRRNYALEPTAEGFCKTADTSLLPDCFR*
Ga0181505_1097508813300016750PeatlandMSAREIQDQKTIARELFVQQVAHANADASASPLRGATICSTTICSTKTRRDYTLDSTADEFCQAADTSLLPVIRGDAANLMRVLR
Ga0187819_1032892913300017943Freshwater SedimentMSTREIQDQKAIAREMFVEQAAHAKADVSASPLRGDTSCSFKSRRDYSLESPEEGFYELADTSLFPVTR
Ga0187819_1033358923300017943Freshwater SedimentMSAREIQDQKAIGREMFVQQAAHANTGVSASPLRRDTICSIKSTRDYTLESTAEDGFYEPADTSLLPVTR
Ga0187879_1077038723300017946PeatlandMSARAIQDQKAIAREMFAQQAARTNADVSAGPLRGATICSTKSRRDYTYESTADEFCEAADASLLPLV
Ga0187781_1133146723300017972Tropical PeatlandMSAREIQEPKAIAREMFVQQGAHDTADVSASPLREGTICSIKSRRDCALESTVDCGFYETADTLLQPVTRVEAANLIRVLRQLEV
Ga0187805_1008164833300018007Freshwater SedimentMSAREIQDQKAIAREMFLQQAARANADVSASPLRGATIYAAKSRRDDTRESTADGFCEAADTSLLPVIRVDAANLMRVLRQLEV
Ga0187805_1022323713300018007Freshwater SedimentMSTREIQDQKAIAREMFVQQAAHANADVSASPLRGATICSITSRRDYTLESAAEDRFYEPADTSLLPVTRIDAANLIRLLRH
Ga0187881_1042653723300018024PeatlandMSARDIQDQKTIAREMFVQQAAHANADVSTSPLRGATICSTKSRPDYTLESTADEFCEAADTSLLPVIRVDAANLM
Ga0187885_1040369213300018025PeatlandMSAREIQDEKAIACEMFVQQTAHANADVSASPLRGAAICSTKSTRDYTLESTADEFCEAADTSLLPVIRVD
Ga0187859_1048736323300018047PeatlandMSAYEIQDHMPIAREMFVQEAAHANADVSAGPVRGDAICSIKSRRDYHLESTAQDGFYQPTDTSFLPLTRVDAANLIRVLRQLEVI
Ga0210399_1022454623300020581SoilMSGPKIQDQKAIAHEMFVQQPAYANANVSASPLPADTICSIKSRRDYPLESKTEDRFYEPADASLLP
Ga0210399_1066964913300020581SoilMSARKIQEPKATAREMSAQQAAHANAGVSASPLQGDTICSIKSRRDYAPESTAEDGFYEPEDTSLLPVT
Ga0210395_1057014813300020582SoilVSAREIQDQKTIAREMVVQQPAHANADVSASPLREATICSAKSSRDYTLESTADGFCEAADTSLVPVIRVDANLMRILRQLEVIA
Ga0210395_1134432823300020582SoilMSVREIQDEKAIASEMFVQQGAHANANASTSPLRGATICSTESRRDYTLESTADEFCEAADTSLLPVIRVDAADFMRVWRQME
Ga0210400_1050381233300021170SoilMTARHIQDQKTIAGEMVVQQAARANADVSAGPLRETTIRSKSRRDYTLESRADRFCEAPDTSMLPVI
Ga0210400_1067456223300021170SoilMSEIQDEKAIAREMFVQQAAHANTDVSTSPLRGATICSSKNRRDTLESTADEFCEAADTSLLPVIQV
Ga0210396_1025854013300021180SoilMSAREIQDQKTIAREMFVQQAAHANADVPASPLRGSAIYATESGPAYSRESKADGFREAADTTLLPVDRV
Ga0210396_1054024013300021180SoilMSAREIQGQKAIALEMMVQQAAHANADVSATPLAGDTICSVKSRRDCTLESKAEDGSYEPVDTSLPPVTRVDAANLIRAL
Ga0210396_1071619513300021180SoilMSTRAIQDQKTIAREMFVPPVARANADVSASPLRGATIYPTENRQDYIIESTADEFCEVADSSLLQVNRVDAAILMR
Ga0210388_1082332323300021181SoilMFVQQAAHTNADVSASPPRGATIYATETKRDYTRESTTGGFCDAADTSMLPAIRVAAANLMRV
Ga0210388_1159365623300021181SoilMSASEVLDQKSVAREMFVQQPAHANADVSPSPLREAAIYSTKSRRDYALEPAANEFYEPADASASLLPVNRVDSAILMRVLRQLE
Ga0210385_1088127613300021402SoilMSAHEIPDQKATAREMFVHQATHANADISASPLRGATICSNKSRRDYTLQSTADEFCEAADTSLLPVIRVDAANFMRVLRQL
Ga0210397_1117204513300021403SoilMSAREIQDQKAIAHEMFVQQVAHANADVSASPLRGATICSSKSRRDYALESTADEFCEAADTSLLPVIGVDAANLMRVL
Ga0210389_1141455613300021404SoilMSGPKIQDQKAIAHEMFVQQPAYANANVSASPLPADTICSIKSRRDYPLESKTEDRFYEPADASLLPVTRGDAANLIHALQQLE
Ga0210383_1173275823300021407SoilMSAREIQDQKAIAREMFVQRVAPANADVSASPLPGDTICSIKSRRDCTLESKAEDGFYEPADTSLLPVTRVDAANLIRALRQ
Ga0210384_1032153813300021432SoilMSAREIQNQKAIPREMIVQQAAHANADVSASPLRGDTICSTKSERECTLESTAEDGSYEPVDTSLLPVTRVDAANLIR
Ga0210391_1015988113300021433SoilMSARETQDQKAIAGEMFVQQVARANADLSASPLRVATIRSTKSRRDYILESTADEFYEAADTSLLPVIGIDAANLMRILRQLEV
Ga0210398_1030402313300021477SoilMSAREIPDQKATAREMFVRQATHANADLSDSPLRGATICSTKSRRDHTLESTPDEFCEAADTSLLPVIRVD
Ga0210398_1096796023300021477SoilMSAREIQDQKTIAREMFVQPAAHATADVSASPLRGTTIYANESGQSYTRESTADGFCEAADTSLLRV
Ga0126371_1172490013300021560Tropical Forest SoilMSAREIQDQKAVAREMLVQQAANGNADLPATPLRGATIFSTRSKRDYTLESIADEFGEAADTSLLPVIRVDAADLMRVLRLLEV
Ga0242645_101817913300022501SoilMSAREIQDQKAIALEMMVQQAAHANADVSASPLRGATICSSKSSRDYTLESTADEFCEAADTSLLPVIRVDAAD
Ga0222728_104141023300022508SoilMSAREIQDRKAIAPEMMVQQAAHANSDVSASPLPGDTICSIKSRRDYTLESKAEDRFYEPADTSSLPVTRVDAANLI
Ga0242656_102186613300022525SoilMSGPKIQDQKAIALKMFVQQAAHANPDVSANPLPEETICSIKSRRDYTFESKAENRLYEPADTTLLPVTRVDAANLIRA
Ga0242656_114292323300022525SoilMSAREIQDRKAIAPEMMVQQAAHANSDVSASPLPGDTICSIKSRRVSTFESEVGDGFYEPADTSPLPVTR
Ga0242666_110996113300022721SoilMMAREIQDQKASAHEIFVPQVALANEDVSASPMRGATICSAKSRRDYALEPTAEGFCETADTSLLPVIGLDAANL
Ga0242665_1014552023300022724SoilMSAREIQDEKAIAREMFVQQAAHANADVSSSPLRGATICSTKSRRDYTLESTADEFCEAADTSLLPVIRVDPAN
Ga0224570_10978123300022730RhizosphereMSARAIQDQKTIASGMFVQQAACANADVSASPLRGATICSSKSGWDYTVESTADEFYEAPDASLPPINRVDAAILVRVLRQLEVIAK
Ga0224572_104854423300024225RhizosphereMSVRAIPDQKTSALDMFVQQAAHANADVTASPLRGATICSPKSGRGYTLESTADEFCEAADGSLPPVNRVDAANLIRVLRQVIAK
Ga0224564_100487513300024271SoilMSAREIQDQKAIARETSVQQTAHASADVSASSLRRDTISIQNTRDSTLESTAEDEVYEPADTSLFPVTRLDDT
Ga0207663_1151413413300025916Corn, Switchgrass And Miscanthus RhizosphereMSAREIQDQKAIAREMFVQQAAHANADVSASPLRGATICSTKSRRDYTLEPTADEFCEAADTSLLPAIRGDAANPMRV
Ga0207700_1001748163300025928Corn, Switchgrass And Miscanthus RhizosphereMSASEIQDQKAIGREIFVQQADHANADVSASPLRAATICSSKSKRDYTLELTADESCEAADTSLLAVTRV
Ga0257149_105806323300026355SoilMSVSEIQDQKAIGREMFVQQADHANADVSASPLRGATICSSKSKRDYTLELTADEFCEAADTSLLAVTRVDAANF
Ga0257154_107376613300026467SoilMTARDTQDQKTIAGEMVVQQAARANADVSAGPLRKTTIRSKRRRDYTLESTADGFREAPDTSTLPVIRVDANLIRQAPRIAFKTKGSILL
Ga0209648_1048841723300026551Grasslands SoilMSAREIQDQKAIARETFVQQATHANADVSASPLRGATICSTKSRRDHTLESTADDFCEVADTSLLPVIRIDAANLMRVL
Ga0209648_1069638713300026551Grasslands SoilMSAREIQDEKAIAREMFVQQTAHANTDVSASPLRGATICYTESRRDYTLESTADELCEAADTSLLPVIRVH
Ga0209648_1076536613300026551Grasslands SoilMSAREIQDQKAIAREMFVQQATHANADVSASPLRGATICSTKSRRDYTLESTADEFCEAADTSLLPVIR
Ga0207839_102260823300027010Tropical Forest SoilMRGSIVDARKIQDQKAIARETFVQRAAHANAEVSASPTPGDTICSPKSEREYTFESTAEDGFHEPVDTRLPVTRVD
Ga0208366_103608623300027073Forest SoilMSAREIQDQKAIALEMMVQQAAHANADVSASPLPGDTICSIKGRRDCTLESKAEDRFYEPADTSLLPVTSVDAANLIRVLRQL
Ga0208324_112696923300027604Peatlands SoilMSARDIPDQKAIAREMFVQHAAHANADVSASPLRGDTIWSIKSRRDYTLESTPEDGFYEPADTSLLPVTRIDAANLIRVLRQLE
Ga0209420_100996853300027648Forest SoilMSAREIQDQKASAHEMFVPQVAPVSEDVSASPMRGATICSAKSRRDYALEPTAEGFCKTADTSLLPVIGVDAANLVRVLRQLEV
Ga0209333_115554113300027676Forest SoilMSAREIQDQKAIAREMFVQQAAHANADVSVSPVRRNTICSIKSRRDYTLESTSKDGFYEPANTSLLPVTRIDA
Ga0209580_1032938323300027842Surface SoilMMAREIQDQKASAHEMFMPQVAPANEDVSASPMRGATIFSAKSRRDYALEPAAEGFCETADTSLLPAIGVDAANLVRVLR
Ga0209693_1042394623300027855SoilMSAREIQDQKAVAREMFVQQAAHANADVSASPLRGATICSTKSRRDYTLEPTADEFCEAADTSLLPVIRGDAANLMRVLRQLEVIAK
Ga0209701_1068227323300027862Vadose Zone SoilMSAGKIQDQKAIAREMFVQQAAHANAEVSASPLRGATICSTKSRRDYTLESTADEFYEAADTSLLPVIR
Ga0209526_1011664233300028047Forest SoilMSGPKIQDQKAIAREMFVQQAAHANGDVSASPLVGDTICSTKSRRDYTLESKAEDRFYEPADTSLLPVT
Ga0302224_1046622813300028759PalsaMSVREVQDQKAIAREMFIQPVAHSNSDASAIPLRGTAIYSTKSRRDYIPESTADGFYEAADRSLLLGIRADAAN
Ga0302218_1013870723300028863PalsaMSAREIQDQKAIAHEVFVQQVAHANADVSASPLRGATICSTKSRRDYALESTADEFCEAADTSLLPVIGVDAAKLMRV
Ga0222748_114098123300029701SoilMSAREIQDRKAIALEMMVQQAAHANADVSASPLPGDTICSIKSRRDYTLESKAEDRFYEPADTSSLPVTRVDAAN
Ga0311369_1006486813300029910PalsaMSAREIQDQKAVAREVFVQQAAHANADVSAGPLRGAAICSTKSSQDCALESTADEFCEAADTSLLPVIR
Ga0311340_1047509413300029943PalsaMSAREIQDQKTIAREMVVQQPAYANADVPAGPLRGATICSTKSIGDYSLESTADQFCEAADASLLPVNRADANLMRVLRQLEVIA
Ga0311352_1060684223300029944PalsaMSAREIQDQKAVAHQMFVQQAARANADVLASPLRGAPIRSTKNGRDYTLESKADEFCEAADTSLLPLIR
Ga0311352_1139701713300029944PalsaMSAREIQDQKAIAHEVFVQQVAHANADVSASPLRGATICSTKSRRDYALESTADEFCEAADTSLLPVIGVDAAKLMRVFR
Ga0302177_1050270923300030053PalsaMSARDIQVQKAIPGEMFVQPAARTHAEVSASRPGGVPICSTESRRDYALESIADEFCEAADPSLLPIRVDAANLM
Ga0311372_1150131223300030520PalsaMSAREIQDQKAIAREMFVQQVAYANADVSASPLRGATICSTKSRRDYALESTADEFCEAADTSLLPVIGVDAAKLMRVF
Ga0311357_1091374513300030524PalsaMSAREIQDQKAIAREMFVQQAAHANADVSARPVRRNTVCSIKSRRDYTLESTAKDGFYEPADTSLLPVTRIDAANLIRVLRQLEVLA
Ga0210265_114120923300030605SoilMSAREIQDQKAIALEMMVQQAAQANADVSASPLPGDTISSIKSRRDCTLESKAEDRFYEPADTSLLPV
Ga0307482_105129623300030730Hardwood Forest SoilMSAREIQYQKAIAREMFVQQAAHANADVPASPVRGDTICFIKSRRDHTLESEDGFYEPADISLLPVTRIDAANLIRVLRQLELIKTTGTT
Ga0075385_1155231913300030854SoilMSAREIQDQKAIAREMFVQQAAHANADVSASPLRGATICSTKSRRDYTLEPTADEFCEAADTSLLPVIRVDAAYLMLVLRQL
Ga0138302_106771623300030937SoilMSTRDIQDQKANPREVFLHQAVHANVDVSANPVRRAMIRSTRSRQDYTLESTADQFSEAADTSLLPVIRVDAANLTRILR
Ga0073994_1219183523300030991SoilMSAREIQNQKAIAREMMVQQAAHANADVSASPLPGDTICSIKSRRDCTLESKAEDRFYEPGDTSLLPVTRVDAANLIRALQQLH
Ga0170822_1279568523300031122Forest SoilMSGPKIQDQKAIAREMFVQQAAHANGDVSASPLPGDTICSIKSRRDCALESKAEDRFYEPADTSLLPVTRVDAAN
Ga0170824_11644365123300031231Forest SoilMSAREIQDRKAIARKMVQQASHANADVSAGPLRGATIYSSKSARDYTLESTADEFFEAADTSLLALTRVDAANFMRVLRQFEMIA
Ga0170818_10367643213300031474Forest SoilMSAREIQDQKTIARGMFVQQAAHADADASASPLRGATICSTKSRRDYTLESTADEFCEAADTSLLPVIRVDAA
Ga0310686_11252580123300031708SoilMSVREIQDQKAIARKMFVQQTAHANGDVSASPLPEDTICSIKSRRDYALESSAEDGFDEPVDTLLVTQVDAANLIRALQQLEVIAKR
Ga0310686_11796445433300031708SoilMSASEILDQKPAARELFIQQAAHATADVSASPLRETAIYSAKSRRDYTLEPTADEFYQAADASASLLPVSRLDAAILTR
Ga0307476_1002842033300031715Hardwood Forest SoilMSAREIQDQKAIAREMFVQQATHANADVSASPLPGDTFCSIKSRRDCTLESKAEDGFYEPADTSLLPVTRVDAANLIRA
Ga0307476_1077513713300031715Hardwood Forest SoilMSTREIQDQKAIAREMFVEQAAHAEADVSASPLQGDASCSFKRRRDYTLASPAEDGFYEVADTTLFPVTRVDAANL
Ga0307474_1061691813300031718Hardwood Forest SoilMTARDIQDQKTIASEMVVQQADRANADVSAGPLRETTIRSKSRQDYNVEPTADGFCEAPDTSMLPVIRVDANLIRQAPRIA
Ga0307475_1065982533300031754Hardwood Forest SoilMSAREIQDQKAIALELIVQQAAHANADVSASPLPGDTICSIKSRRDCTLESKVEDRLYEPSDTSLLP
Ga0307475_1128672323300031754Hardwood Forest SoilMSGRKIQDREAIAREMFVQQAAHANGDVSASPLPGDTICSIKSRRDYPLESKAEDRFYEPADTSWLPVTRVDAANLIRAVQQL
Ga0307475_1140201413300031754Hardwood Forest SoilMSAREIQDQKAIAREMFVQQVAHANADVSASPRRGATICSSKSRRDYALESTADEFCEAADTSLLPVIGVDA
Ga0307478_1023747533300031823Hardwood Forest SoilMSAREIQDQKTIAREMFVQQAAHANADVPASPLRGTAIYATESGPAYSRESKADGFREAADTPLLPVNRVDAAN
Ga0307478_1062032013300031823Hardwood Forest SoilMSAREIQDEKAIAREMFVQQAAHANADGSASPLRGATICSTKSRRDYTLESTADEFCEAADTSLLPVVRVDAANLTRVLRQLEVIA
Ga0307478_1129326023300031823Hardwood Forest SoilMSAREIQDQKATAREMLVQQAAHASADVSASPLRGATICSIKSRRDYALESPAEDGFYESADTSLLPVIRGDAPTLMRVLRQLEVIAK
Ga0306920_10010663213300032261SoilMSAREIHDQKAIAREMFVQQAAHANADVSASPLRGATIRSTKSRRDYALESTTDEFCEAADTSLLPVIRVDAANLMRVLRHLEVI
Ga0348332_1396746513300032515Plant LitterMSAREIQDQKAIAREMFVPQGAHANTDVSASPLRGATICSTKSIGDYTLESTAGEFCEATDASLLPVNRADANLMRVLRQ
Ga0335074_1140734623300032895SoilMSARDIQDQKTLAREMLVQQAAHTNADVPAGPLRGATMCSTKRRRDSTLESTAGEFCAAADTSLLPVIRVDAANLMRVLRQL
Ga0334854_015152_2_2113300033829SoilMSAREYQDQKTIAREVFVRRAAHADADVSAGPLRGATICSTNSRCDYTLESTADEFCEAADTSLLPVIRG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.