Metagenome / Metatranscriptome Family F060758

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060758
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	85 residues
Representative Sequence	VTVRFSVTVRQVREDGSEAPLDGELAAALAGPAEQFAGLAAWAADEAGYLDHGEREKVIGQEGRELQRRLLQATFD
Number of Associated Samples	110
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.30 %
% of genes near scaffold ends (potentially truncated)	97.73 %
% of genes from short scaffolds (< 2000 bps)	95.45 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.212 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.212 % of family members)
Environment Ontology (ENVO)	Unclassified (34.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.970 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.15% β-sheet: 5.77% Coil/Unstructured: 48.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00106	adh_short	1.52
PF01527	HTH_Tnp_1	1.52
PF08241	Methyltransf_11	0.76
PF09369	MZB	0.76
PF13518	HTH_28	0.76
PF14417	MEDS	0.76
PF13276	HTH_21	0.76
PF00589	Phage_integrase	0.76
PF13185	GAF_2	0.76
PF10014	2OG-Fe_Oxy_2	0.76

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.21 %
Unclassified	root	N/A	28.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.21 %
Unclassified	root	N/A	28.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.21 %
Unclassified	root	N/A	28.79 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	67.42 %
Unclassified	root	N/A	28.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	34.09 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.33 %
Unclassified	root	N/A	28.79 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.76 %

Name	Rank	Taxonomy	Distribution
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	34.09 %
Unclassified	root	N/A	28.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.52 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.76 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.76 %

Name	Rank	Taxonomy	Distribution
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	34.09 %
Unclassified	root	N/A	28.79 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	15.15 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.76 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.76 %

Name	Rank	Taxonomy	Distribution
Staphylococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae	34.09 %
Unclassified	root	N/A	28.79 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	15.15 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.76 %
Microthrixaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae	0.76 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.76 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Staphylococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus	34.09 %
Unclassified	root	N/A	28.79 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	15.15 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.76 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.76 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.76 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.76 %
Candidatus Microthrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix	0.76 %

Name	Rank	Taxonomy	Distribution
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	34.09 %
Unclassified	root	N/A	28.79 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	12.88 %
unclassified Cellulomonas	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas	0.76 %
Candidatus Microthrix parvicella	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	0.76 %
Streptacidiphilus albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus albus	0.76 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.76 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Staphylococcus aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	34.09 %
Unclassified	root	N/A	28.79 %
Frankia sp. KB5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	12.88 %
Cellulomonas sp. URHE0023	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. URHE0023	0.76 %
Candidatus Microthrix parvicella	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	0.76 %
Streptacidiphilus albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus albus	0.76 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.76 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1051621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	515	Open in IMG/M
3300000687\|JGI12487J11892_101636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	500	Open in IMG/M
3300000710\|JGI12294J11894_104703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	514	Open in IMG/M
3300002914\|JGI25617J43924_10264212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	585	Open in IMG/M
3300002914\|JGI25617J43924_10290570	Not Available	561	Open in IMG/M
3300003218\|JGI26339J46600_10138056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus albus	574	Open in IMG/M
3300003219\|JGI26341J46601_10162793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	618	Open in IMG/M
3300003219\|JGI26341J46601_10206886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	531	Open in IMG/M
3300004063\|Ga0055483_10166163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	709	Open in IMG/M
3300004468\|Ga0068977_1017834	Not Available	569	Open in IMG/M
3300005103\|Ga0066813_1008462	Not Available	599	Open in IMG/M
3300005174\|Ga0066680_10426958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300005180\|Ga0066685_10932923	Not Available	578	Open in IMG/M
3300005332\|Ga0066388_108566364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	509	Open in IMG/M
3300005343\|Ga0070687_100664555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	724	Open in IMG/M
3300005450\|Ga0066682_10843853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	550	Open in IMG/M
3300005468\|Ga0070707_101858626	Not Available	569	Open in IMG/M
3300005554\|Ga0066661_10828934	Not Available	541	Open in IMG/M
3300005557\|Ga0066704_10808266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. URHE0023	583	Open in IMG/M
3300005586\|Ga0066691_10743178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	579	Open in IMG/M
3300006050\|Ga0075028_100392745	Not Available	792	Open in IMG/M
3300006102\|Ga0075015_100870816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	545	Open in IMG/M
3300006794\|Ga0066658_10643416	Not Available	580	Open in IMG/M
3300006797\|Ga0066659_11383215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	587	Open in IMG/M
3300009089\|Ga0099828_10853733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	814	Open in IMG/M
3300009090\|Ga0099827_11185919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300009521\|Ga0116222_1141692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	1035	Open in IMG/M
3300009521\|Ga0116222_1384737	Not Available	609	Open in IMG/M
3300009523\|Ga0116221_1314985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	678	Open in IMG/M
3300009524\|Ga0116225_1309193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	705	Open in IMG/M
3300009638\|Ga0116113_1105881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	681	Open in IMG/M
3300009672\|Ga0116215_1455963	Not Available	553	Open in IMG/M
3300009698\|Ga0116216_10942801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	516	Open in IMG/M
3300009700\|Ga0116217_10469794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	793	Open in IMG/M
3300009700\|Ga0116217_10583675	Not Available	697	Open in IMG/M
3300009700\|Ga0116217_10962197	Not Available	523	Open in IMG/M
3300009824\|Ga0116219_10561606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	629	Open in IMG/M
3300010048\|Ga0126373_11858862	Not Available	665	Open in IMG/M
3300010333\|Ga0134080_10130175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1055	Open in IMG/M
3300010339\|Ga0074046_10800443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	551	Open in IMG/M
3300010379\|Ga0136449_100273107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3114	Open in IMG/M
3300010379\|Ga0136449_102313997	Not Available	779	Open in IMG/M
3300010379\|Ga0136449_103623924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	585	Open in IMG/M
3300010379\|Ga0136449_104182560	Not Available	536	Open in IMG/M
3300011077\|Ga0138572_1028868	Not Available	575	Open in IMG/M
3300011087\|Ga0138570_1022712	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300011090\|Ga0138579_1054887	Not Available	658	Open in IMG/M
3300011269\|Ga0137392_11067977	Not Available	662	Open in IMG/M
3300012200\|Ga0137382_10811205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	673	Open in IMG/M
3300012200\|Ga0137382_11094703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	569	Open in IMG/M
3300012206\|Ga0137380_11492447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	561	Open in IMG/M
3300012207\|Ga0137381_11451926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	578	Open in IMG/M
3300012209\|Ga0137379_10929149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	774	Open in IMG/M
3300012210\|Ga0137378_11398281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	613	Open in IMG/M
3300012211\|Ga0137377_10193797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	1951	Open in IMG/M
3300012349\|Ga0137387_10975089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	609	Open in IMG/M
3300012349\|Ga0137387_10983757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	606	Open in IMG/M
3300012350\|Ga0137372_10742813	Not Available	707	Open in IMG/M
3300012351\|Ga0137386_10371490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1029	Open in IMG/M
3300012351\|Ga0137386_10966040	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300012353\|Ga0137367_10922661	Not Available	600	Open in IMG/M
3300012355\|Ga0137369_10577909	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300012355\|Ga0137369_11014322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	549	Open in IMG/M
3300012356\|Ga0137371_11453632	Not Available	500	Open in IMG/M
3300012359\|Ga0137385_10454001	Not Available	1088	Open in IMG/M
3300012359\|Ga0137385_11561769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	524	Open in IMG/M
3300012360\|Ga0137375_10977764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	667	Open in IMG/M
3300012362\|Ga0137361_10459768	Not Available	1169	Open in IMG/M
3300012363\|Ga0137390_11594543	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012363\|Ga0137390_11655214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	576	Open in IMG/M
3300012923\|Ga0137359_10173955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1922	Open in IMG/M
3300014201\|Ga0181537_11114246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	533	Open in IMG/M
3300017928\|Ga0187806_1348868	Not Available	530	Open in IMG/M
3300017942\|Ga0187808_10496730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	565	Open in IMG/M
3300017943\|Ga0187819_10669168	Not Available	586	Open in IMG/M
3300017966\|Ga0187776_11119547	Not Available	586	Open in IMG/M
3300017973\|Ga0187780_11375153	Not Available	520	Open in IMG/M
3300018006\|Ga0187804_10346467	Not Available	652	Open in IMG/M
3300018007\|Ga0187805_10579052	Not Available	530	Open in IMG/M
3300018064\|Ga0187773_11047052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	538	Open in IMG/M
3300018085\|Ga0187772_11150122	Not Available	570	Open in IMG/M
3300018086\|Ga0187769_10994595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	635	Open in IMG/M
3300018089\|Ga0187774_11453070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	505	Open in IMG/M
3300018090\|Ga0187770_10554120	Not Available	912	Open in IMG/M
3300018433\|Ga0066667_11823382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	551	Open in IMG/M
3300021086\|Ga0179596_10673160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300021476\|Ga0187846_10415264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	552	Open in IMG/M
3300021858\|Ga0213852_1420632	Not Available	517	Open in IMG/M
3300025910\|Ga0207684_10940733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300025952\|Ga0210077_1126182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	536	Open in IMG/M
3300026142\|Ga0207698_11594639	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	668	Open in IMG/M
3300026326\|Ga0209801_1131365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1068	Open in IMG/M
3300026532\|Ga0209160_1341567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	513	Open in IMG/M
3300026551\|Ga0209648_10422789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	852	Open in IMG/M
3300026551\|Ga0209648_10666692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	568	Open in IMG/M
3300026852\|Ga0207838_106520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	632	Open in IMG/M
3300026886\|Ga0207982_1009677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	501	Open in IMG/M
3300027497\|Ga0208199_1131709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	510	Open in IMG/M
3300027903\|Ga0209488_10840642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	648	Open in IMG/M
3300027905\|Ga0209415_10567727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	851	Open in IMG/M
3300027905\|Ga0209415_10937983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	584	Open in IMG/M
3300029951\|Ga0311371_10314015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2199	Open in IMG/M
3300030007\|Ga0311338_10477935	Not Available	1313	Open in IMG/M
3300030490\|Ga0302184_10352973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300030503\|Ga0311370_11940729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	591	Open in IMG/M
3300030520\|Ga0311372_10388807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2123	Open in IMG/M
3300030580\|Ga0311355_10487827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1185	Open in IMG/M
3300030706\|Ga0310039_10372362	Not Available	529	Open in IMG/M
3300030707\|Ga0310038_10508384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	508	Open in IMG/M
3300030743\|Ga0265461_12731939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	588	Open in IMG/M
3300031670\|Ga0307374_10610447	Not Available	549	Open in IMG/M
3300031671\|Ga0307372_10535887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	544	Open in IMG/M
3300031672\|Ga0307373_10597093	Not Available	566	Open in IMG/M
3300031723\|Ga0318493_10721099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	559	Open in IMG/M
3300031890\|Ga0306925_11611822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300032041\|Ga0318549_10407953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300032042\|Ga0318545_10164927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	789	Open in IMG/M
3300032160\|Ga0311301_10021468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18066	Open in IMG/M
3300032160\|Ga0311301_12544706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	570	Open in IMG/M
3300032770\|Ga0335085_12357480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	531	Open in IMG/M
3300032782\|Ga0335082_10868758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	764	Open in IMG/M
3300032783\|Ga0335079_12028883	Not Available	553	Open in IMG/M
3300032783\|Ga0335079_12384367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	500	Open in IMG/M
3300032805\|Ga0335078_10218079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2631	Open in IMG/M
3300032805\|Ga0335078_10304712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2140	Open in IMG/M
3300032805\|Ga0335078_12720370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	503	Open in IMG/M
3300032805\|Ga0335078_12740318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. KB5	501	Open in IMG/M
3300032828\|Ga0335080_12237673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	524	Open in IMG/M
3300032892\|Ga0335081_11587243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	719	Open in IMG/M
3300032954\|Ga0335083_10189576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1894	Open in IMG/M
3300033158\|Ga0335077_10844265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Staphylococcaceae → Staphylococcus → Staphylococcus aureus	928	Open in IMG/M
3300033158\|Ga0335077_12022435	Not Available	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.88%
Aquatic	Environmental → Aquatic	11.36%
Plants	Host-Associated → Plants	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.58%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Peat	Environmental → Terrestrial → Peat	4.55%
Marine	Environmental → Aquatic → Marine	1.52%
Sediment	Environmental → Aquatic → Sediment	1.52%
Cave	Environmental → Terrestrial → Cave	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.58%
Loam	Environmental → Terrestrial → Soil → Loam	5.30%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.55%
Clay	Environmental → Terrestrial → Soil → Clay	2.27%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.18%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.27%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.21%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	18.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.30%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.27%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000687	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50	Environmental	Open in IMG/M
3300000710	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004063	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2	Environmental	Open in IMG/M
3300004468	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011077	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011087	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 55 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025952	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026852	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 62 (SPAdes)	Environmental	Open in IMG/M
3300026886	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_10516211	2228664022	Soil	VTVRFSVTVRQVREDGSEAPAEEELAAALAGPAEQFAGLLSWAAEEARFLDLGEREEVIGQEGRELQRRL
JGI12487J11892_1016361	3300000687	Tropical Forest Soil	VTVRFSVTIRQVRDDGSEAPLQQELAAALAAPAEQFAGLAAWAAGEAGYLDHGEREKVIGQEGRELQRRLL
JGI12294J11894_1047031	3300000710	Tropical Forest Soil	VTVRFSVTIRQVRDDGSEAPLQQELAAALAAPAEQFAGLAAWAAGEAGYLDHGEREKVIGQEGRELQRRLLQATFDIDSAGEERAEGV
JGI25617J43924_102642121	3300002914	Grasslands Soil	VTAKFTVTVXQVLDDGSEAPLEGELAAALAAPAEQFAGLAAWAAGEARFCDHGEREKVIGEEGRELQRLVLQASFDVDAAREERPAGPVIS
JGI25617J43924_102905702	3300002914	Grasslands Soil	VAVTFSVTVRQIREDGSEAPADGELAAALAAPVGQFASMLTWSAGEAAGLDHGEREKAIAESGRELQRR
JGI26339J46600_101380561	3300003218	Bog Forest Soil	VTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQE
JGI26341J46601_101627931	3300003219	Bog Forest Soil	VTVKFSVTIRQVCDDGSEAPLEQELAAALAGPAEQFAGLAAWAAGEACYLDHGEREKVIGDEGRELQRRLLQATFDIDA
JGI26341J46601_102068861	3300003219	Bog Forest Soil	VTVRFSVTVRQVREDGSEVPLDGELAAALAAPAEQFAGLAAWAADEAAYLDHGEREKVIGQEGRELQRRLLQATFDV
Ga0055483_101661631	3300004063	Natural And Restored Wetlands	VAARLTVTVRQVLEDGSEAAVDGELAAALEESAEQFAGLVTWAADESRFLDHGEREEAIGREGRELERRLLQATFLLDAAREERAPQVTSAAGVRHRTVEPGQKRGLASIFGPVKVTRMA
Ga0068977_10178341	3300004468	Peatlands Soil	VTVRLSVTVRQVLEDGSEAPVDGELAAALAGPAEQVAGLLSWAAGEAGSLDHGEREEVIGEEGRELQRRL
Ga0066813_10084621	3300005103	Soil	VTVRFSVTVRRVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLLQATFDIDSARE
Ga0066680_104269581	3300005174	Soil	VTVRFSVTVRQVREDGSEAPLDGELAAALAGPAEQFAGLAAWAAGEAGYLDHAEREKVIGQEGRELQRRLLQATF
Ga0066685_109329231	3300005180	Soil	VTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLMQATFDIDSAREERASGVTSAAGIPHGSVEEGHGRGLASV
Ga0066388_1085663642	3300005332	Tropical Forest Soil	VAVRFSVTIRQVREDGSEVPLEGELAAALAAPAEQFAGLAAWAAEEAGYLDHGEREKVIGAEGRELQRRL
Ga0070687_1006645552	3300005343	Switchgrass Rhizosphere	VTVRFSVTVRQVREDGSEAPLDGELAAALAGPAEQFAGLAAWAADEAGYLDHGEREKVIGQEGRELQRRLLQATFD
Ga0066682_108438531	3300005450	Soil	VTAKFTVTVRQVLDDGSEAPLEGELAAALAAPAEQFAGLAAWAAGEARFCDHGEREKVTGEEGRELQRLVLQASFDVDAAREERPAGPVISAAGIRHGIV
Ga0070707_1018586261	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLLQATFDIDSAREERASGVTSAAGIPHGSVEEGHGRGL
Ga0066661_108289341	3300005554	Soil	VAVRFSVTIRQVREDGSEVPLEGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLMQATFDIDSAREERASGVTSAAGIPHGSVEEGHGRGLASV
Ga0066704_108082661	3300005557	Soil	MLGGNHSRQVSGGTAVTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLMQATFDIDSA
Ga0066691_107431781	3300005586	Soil	VTVRFSVTVRQVREDGTEVPVEGELAAALAGPAEQFAGLASWAAEEARFLDHGEREDVIGQEGRELQRRLLQATF
Ga0075028_1003927452	3300006050	Watersheds	MLGGNHSRQASGGTAVTVRFSVTVTQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARCCDHGEREKVIGQEGRELQRRLLQA
Ga0075015_1008708161	3300006102	Watersheds	MMGGNHSRRVSGGAAVTVRFSVTVRQVREDGSEVPLDGELAAALAAPVEQFAGLAAWTAEEAGYLDHGEREKVIGEEGRELQRRLLQAT
Ga0066658_106434161	3300006794	Soil	VTVRFSVTVRQVLEDGTEVPVEEELAAALAGTAERFAGLAAWAADEARFGDLGEREEVIGTGGRELQRR
Ga0066659_113832151	3300006797	Soil	MMSGNHSWQAPGGAAVTVRFSVTVRQVREDGSEAPLDGELAAALAGPAEQFAGLAAWAADEAGYLDHAEREKVIGQEGREL
Ga0099828_108537332	3300009089	Vadose Zone Soil	VTVRFSVTVRQVGEDGSEAPAEEELAAALAGPAEQFAGLLSWAAEEAGYLDHGEREEVIGEEGRELQRRLLEA
Ga0099827_111859192	3300009090	Vadose Zone Soil	MGGKPFLASIGGTAVAVTVSVTVRQVRDDGTEGPADGELAAALADSAEQFAGLLTWAADEARFLDHGVREEVIGAGGRELQRRLLQATFDLDSAREQRI
Ga0116222_11416921	3300009521	Peatlands Soil	MMSGNHSWQAPGGAAVTVRFSVTVRQVREDGSEAPLDGELAAALAGPAEQFAGLAAWAADEAGYLDHGEREKVIGQEGRELQRRLLQATFDVDSAREERADGVTSAAG
Ga0116222_13847372	3300009521	Peatlands Soil	VTVTLSVTVRQVREDGSEAPVDGELAAALSGPAEQFAGLLTWAAEESGFLDHGEREGVIGEEGRELQRRLLEATLTLDSA
Ga0116221_13149852	3300009523	Peatlands Soil	VTVRFSVTVRQVREDGSEAPLGGELAAALAAPAEQFAGLAAWAAGEAGYLDHGEREKVIGDEGRELQRRLLQATFDIDSAREERADGV
Ga0116225_13091931	3300009524	Peatlands Soil	MAGNHSRQESGGAAVTVRFSVTVRQVLEDGSEAPVEGEVAAALAGPAEQFAGLAAWAADEARFCDHGEREQVIGEEGRELQRRLLQAAFDIDSARE
Ga0116113_11058811	3300009638	Peatland	MGRNHPRRAPEGTAAVRITVTIRQVRDDGTEAEVDGDLAAALEESAEQFAGLAGWVGDESRYLDHAEREKALTEEGRELQRRLLQATYELDAAQEERAEGVTSAAGVRHGTLERGCGRGLET
Ga0116215_14559631	3300009672	Peatlands Soil	MGGNHSRQAQEAAVTVRFSVTVRQVLEDGTEVPVEEELAAALAGTAEQFAGLAAWAADEARFCDLGEREEVIGTE
Ga0116216_109428011	3300009698	Peatlands Soil	MAGNHSRQESGGAAVTVRFSVTVRQVLEDGSEAPVEGEVAAALAGPAEQFAGLAAWAADEARFCDHGEREKVI
Ga0116217_104697942	3300009700	Peatlands Soil	VTARFTVTVRQVLEDGTEAPLEGELAAALAGPAEQFAGLAAWAAGEAGYLDHGERENVIGDEGRELQRRLLQATFDVDSAREERAGQVTSAAGI
Ga0116217_105836752	3300009700	Peatlands Soil	MGGNHSRQAQEAAVTVRFSVTVRQVLEDGTEVPVEEELAAALAGTAEQFAGLAAWAADEARFCDLGEREEVIGTEGRELQRRLLLEATLAVDAAREERAARVTSA
Ga0116217_109621971	3300009700	Peatlands Soil	VTVRFSVTVRQVGEDGSEAPAEEGLAAALAGPAEQFAGLAAWATDEARFCDHGEREKVIGQEGRELQRRLLQATS
Ga0116219_105616061	3300009824	Peatlands Soil	VTARFSVTIRQVREDGSEVPLEGELAAALAAPAEQFAGLAAWAASEAGYLDHGEREKVIGAEGRELQRRLLQATFDVDSARE
Ga0126373_118588622	3300010048	Tropical Forest Soil	VARLTVTVRQVLEDGSEAAVNGELAVALEESAEQFAGLLTWAAEESRYADHGEREEAISREGRELERRLLQATFRLDAAREERAVQVTSAAGVRHRTVEAGQERGLASVFG
Ga0134080_101301752	3300010333	Grasslands Soil	MAGNHSRQESGGAAVTAKFTVTVRQVLDDGSEAPLEGELAAALAAPAEQFAGLAAWAAGEARFCDHGEREKVTGEEG
Ga0074046_108004431	3300010339	Bog Forest Soil	MMSGNHSRQASGGTAVTVRFSVTVRRVLEDGSEVPLDGELAAALAGPAEQFAGPAAWAAGEARYLDHGERETAIGEEGRELQRRLLQATFDIDGARE
Ga0136449_1002731071	3300010379	Peatlands Soil	MTPSDSGGPAVAVRVSVTVTQVNDDGSESPADGELAAALAAPAEQFAGLASWAADGARDLYHGERE*
Ga0136449_1023139971	3300010379	Peatlands Soil	VAARLLVTVRQVLEDGSEAAVDGELAAALADSAEQFSGLLTWAAEESGFLDHGEREEAIGREGRELERRLLQATF
Ga0136449_1036239241	3300010379	Peatlands Soil	MAVTVKFSVTIRQVRDDGSEAPLEQELAAALAGPAGQFAGLAAWAAGEACYLDHGERVKVIGDEGRELQ
Ga0136449_1041825601	3300010379	Peatlands Soil	VAVRFSVTIRQVREDGSEVPLEGELAAALAAPAEQIAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLL
Ga0138572_10288681	3300011077	Peatlands Soil	MLGGNHSRQASGGTAVTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLLQATSGIDSAREERASGVTSAAG
Ga0138570_10227121	3300011087	Peatlands Soil	MLGGNHSRQASGGTAVTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLLQASFDVDAAR
Ga0138579_10548872	3300011090	Peatlands Soil	LSVTVRQVLEDGSEAPVDGELAAALAGPAEQVAGLLSWAAGEAGSLDHGEREEVIGEEGRELQRRLLEA
Ga0137392_110679771	3300011269	Vadose Zone Soil	VAARLTVTVRQVLEDGSEAAADGELAAALADSAEQFAGLLTWAAQESGFLDHGEREEAISREGRELERRLLQATFLLDAAREERAPHVTSAAGVRHR
Ga0137382_108112051	3300012200	Vadose Zone Soil	MAGNHSRQESGGAAVTAKFTVTVRQVLDDGSEAPLEGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGEEGRELQRLVLQASFDVDAAREERPAGPVISAAGIRHGIVEAG
Ga0137382_110947031	3300012200	Vadose Zone Soil	VAVRFSVTIRQVREDGSEVPLEGELAAALAAPAEQFAGLAAWAADEAGYLDHGEREKVIGDEGRELQRRLLQATFDIDSAREQRAEG
Ga0137380_114924471	3300012206	Vadose Zone Soil	VTVRFSVTVRQVRQDGSEVPLDGELAAALAGPAEQFAGLAAWTADEAAYLDHGEREKVIGQEGRELQRRLLQATFDVDSAREQRAAQVTSAADPPRHRGRRPRPGRDQR
Ga0137381_114519262	3300012207	Vadose Zone Soil	VTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAAEEAGYLDHGEREKVIGDEGRELQRRLLQATFDIDSAREE
Ga0137379_109291491	3300012209	Vadose Zone Soil	MLAGNHSRQASGGTAVTARFSVTVRHVRDDGSEVPLDGELAAALAAPAEQFAGLAAWAAGEAGYLDHGEREKVIGDEGRELQRRLLQATFDIDAAREER
Ga0137378_113982812	3300012210	Vadose Zone Soil	MAGNHSRQESGGAAVTAKFTVTVRQVLDDGSEAPLEGELAAALAAPAEQFAGLAAWAAGEARFCDHGEREKVIGEEGRELQRLVLQASFDVDAA
Ga0137377_101937971	3300012211	Vadose Zone Soil	MMGGNHSRQASGGTAVAVRFSVTIRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEAGYLDHGEREKVIGDEGRELQRRLLQATFDIDSAREQRAEGVT
Ga0137387_109750892	3300012349	Vadose Zone Soil	VTVRFSVTVRQVREDGTEVPVEGELAAALAGPAEQFAGLASWAAEEARFLDHGEREDVIGQEGRELQRRLLQATFAIDSAREERPAAPVISAAGIRHGT
Ga0137387_109837571	3300012349	Vadose Zone Soil	MAGNHSRQESGGAAVTVRFSVTVRQVRDDGSEAPLEGELAAALAAPAEQFAGLAAWAAGEARFCDHGEREKVIGEEGRELQRLVLQASFDVDA
Ga0137372_107428131	3300012350	Vadose Zone Soil	VTVRFSVTVSQVLEDGSETRADGELAAALAGAAEQFAGLLSWAGEEARFLDHGEREEVIGQEGRELQRRLLQATFDIDSAREERASGVTS
Ga0137386_103714901	3300012351	Vadose Zone Soil	MLAGNHSRQASGGTAVTARFSVTVRHVRDDGSEVPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLL
Ga0137386_109660401	3300012351	Vadose Zone Soil	VTVRFSVTVRQVREDGTEVPVEGELAAALAGPAEQFAGLASWAAEEARFLDHGEREDVIGQEGRERQRRLLQATLAIDS
Ga0137367_109226611	3300012353	Vadose Zone Soil	MLGGNHSRQASGGAAVTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLLQATFDIDSAPEE
Ga0137369_105779091	3300012355	Vadose Zone Soil	MAGNHSRQESGGAAVTVRFSVTVRQVLEDGSEAPVEGEVAAALAGPAEQFAGLAAWAADEARFCDHGEREKVIGEEG
Ga0137369_110143221	3300012355	Vadose Zone Soil	VTVRFSVTIRQVREDGSEAPVDGELAAALAGPAEQFAGLAAWAAGESGFLDHGEREEVIGEE
Ga0137371_114536321	3300012356	Vadose Zone Soil	VAVRFSVTVRQVLEDGSEVPADAEVAAALAGTAEQFAGLAAWAADEARYLDHGEREQVIGEEGRELQ
Ga0137385_104540011	3300012359	Vadose Zone Soil	VAARLTVTVRQVLEDGSEAAVDGELAAALEESAEQFAGLLTWAADESRYLDHGEREKAIMREGRELERRLLQATFRLDAAREERAPQVTSAAGTRHRTVEAGQERGLASVFGP
Ga0137385_115617692	3300012359	Vadose Zone Soil	MGGNSFPAGIGGTAVAVRFSVTVRQVLEDGSEVPVDGELAAALAGPAEQFAGLVTWTAGEARFLDLGEREEVIGAQG
Ga0137375_109777641	3300012360	Vadose Zone Soil	MGGNHSRQASGGTAVAVRFSVTIRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEAGYLDHGEREKVIGDEGRELQRRLLQATFDID
Ga0137361_104597682	3300012362	Vadose Zone Soil	VAVTVSVTVRQVRDDGTEGPADGELAAALADSAEQFAGLLTWAADEARFLDHGVREEVIGAAGRELQRRLLQATFD
Ga0137390_115945432	3300012363	Vadose Zone Soil	MAGNHSRQESGGAAVTAKFTVTVRQVLDDGSEAPLEGELAAALAGPAEQFAGLAAWTADEAAYLDHGEREKV
Ga0137390_116552142	3300012363	Vadose Zone Soil	MGGNHSRQASGGTAVTVRFSVTIRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEAGYLDHGEREKVIGQEGRELQRRLLQATFDIDSAREQRAGGV
Ga0137359_101739552	3300012923	Vadose Zone Soil	MVTVRRVLEDGSEAAAGGELAAALEDSAEQFSGLLTWAAEESRFPGHGEREEAIMREGRELERRMLQATFRLDAAREERAP
Ga0181537_111142461	3300014201	Bog	VVPAVCRERIRDDGRKPFLAGIGGTAVTVRLSVRVMQVREDGSEAPVDGELAAALAGPAEQFAGLLSWAAGEAGLLDHGEREDVIGAEGRELQRRLLEATLALDSAREERVAQVTSAAGI
Ga0187806_13488681	3300017928	Freshwater Sediment	MLGGNHSRQASGGTAVTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRE
Ga0187808_104967301	3300017942	Freshwater Sediment	VTVRLLVTIRQVHEDGTEVPVDGELAAALAGPAEQFAGLLSWAADESGFLDHGEREDAIGTEGRELQRRLLQATSGIDSAREGRGEGVTS
Ga0187819_106691681	3300017943	Freshwater Sediment	VTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLLQATF
Ga0187776_111195471	3300017966	Tropical Peatland	VAARLLVTVRRVLEDGSEAAVDGELGAALADSAEQFPGLLTWAAEESRYLDHGEREEAIMREGRELERRLLQATFRLDA
Ga0187780_113751531	3300017973	Tropical Peatland	VAARLTVTVRQVLEDGSEAALDGELAAALEESAEQFAGLVTGAAEARFLDHGEREEAIMREGRELERRLLQATFRLDAALEERAPGVTSAAGVRHR
Ga0187804_103464671	3300018006	Freshwater Sediment	MLGGNHSRQASGGTAVTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLLQATFDIDSAREERASGVTSAAGIPHGSVEEATAGAWPACSVRSWSPGWP
Ga0187805_105790521	3300018007	Freshwater Sediment	MMSGNHSWQAPGGAAVTVRFSVTVRQVREDGSEAPLDGELAAALAGPAEQFAGLAAWAADEAGDRDHGEREKMISQEGRELQR
Ga0187773_110470521	3300018064	Tropical Peatland	VTVRLSVTVRQAGEDGTEAPLDGELAEALADATEQVAGLLSWTAGEAGFLDDGEREKVLG
Ga0187772_111501221	3300018085	Tropical Peatland	MVTVRQVLEDGSEAAVDGELAAALEESAEQFSGLLTWAAEESRYLDHGEREEAIMREGRELERRLLQ
Ga0187769_109945951	3300018086	Tropical Peatland	MMGGHHSWQAPGGAAVTVRFSVTVRQVREDGSEAPLDGELAAALAGPAEQFAGLAAWAADEAGYLDHGEREKVIGQEGRELQ
Ga0187774_114530701	3300018089	Tropical Peatland	VTVKFSVTIRQVRDDGSEAPLEQELAAALAGPAEQFAGLAAWAADEARYLDHGEREKVIGDEGRELQRLVLQAAF
Ga0187770_105541202	3300018090	Tropical Peatland	VTARFSVTVRQVREDGSEVLLDGELAAALAGPAEQFARLAAWTADEAAYLDHGEREKVIGQEGREL
Ga0066667_118233821	3300018433	Grasslands Soil	VTVRFSVTVRQVREDGTEVPVEGELAAALAGPAEQFAGLASWAAEEARFLDHGEREDVIGQEGRELQRR
Ga0179596_106731602	3300021086	Vadose Zone Soil	VTVRFSVTVRQVLEDGTEVPAEEELAAALAGTAEQFAGLAAWAADEARFCDLGEREEVIGTE
Ga0187846_104152641	3300021476	Biofilm	VTVRFSVTVRQVREDGSEAPLDGELAAALAGPAEQFAGLAAWAADEAGYLDHGEREKAIGDEGRELQRRLLQATFDIDAAREER
Ga0213852_14206321	3300021858	Watersheds	MLGGNHSRQASGGAAVTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAAEESRYLDHGEREKAIGQEGRELQRRLLQATFDI
Ga0207684_109407331	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGGNHSRQAQEAAVTVRFSVTVRQVLEDGTEVPVEEELAAALAGTAEQFAGLAAWAADEARFCDLGEREEVIGTEGRELQRRLLEATLAVDAAREERAAR
Ga0210077_11261821	3300025952	Natural And Restored Wetlands	VAARLAVTVRQVLEDGSEAAVDGELAAALEESAEQFSGLLTWAAEESGLLDHGEREEVISREGRELERRLLQATFRLDAAREERAARVTSAAGVRHRTVEAGQERGLASVF
Ga0207698_115946391	3300026142	Corn Rhizosphere	VTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAAGEARFCDHGEREKVIGEEGRELRVV
Ga0209801_11313652	3300026326	Soil	VTVRFSVTVRQVREDGSEAPLDGELAAALASPAAQFAGLAAWATGEAGYLDHAEREKVIGQEGREL
Ga0209160_13415671	3300026532	Soil	VTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLMQATFDIDSAREERASGVTSA
Ga0209648_104227891	3300026551	Grasslands Soil	VAVRFSVTVRQVREDGSQAPVDGELAAALAGPADQFAGLLAWAADESGFLDHGQREDVIGQEGRELQRRLL
Ga0209648_106666921	3300026551	Grasslands Soil	VAGRLMVTVRRVLEDGSEAAADGELAAALADSAEQFAGLLTWAAQESGFLDHGEREEAISREGRELERRLLQATFLLDAAREERAPHVTSAAGVRHRTVEA
Ga0207838_1065201	3300026852	Tropical Forest Soil	VTVRFSVTIRQVRDDGSEAPLQQELAAALAAPAEQFAGLAAWAAGEAGYLDHGEREKVIGQEGRELQRRLLQATFDIDSAGEERAEGVTS
Ga0207982_10096771	3300026886	Soil	VTVRFSVTVRRVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLLQASFDVDAAREERASGVTSAAGIPHGSVEE
Ga0208199_11317091	3300027497	Peatlands Soil	MVRFSVTVRQVREDGSEAPLDGELAAALAGPAEQFAGLAAWAADEAGYLDHGEREKVIGQEGRELQRRLLQATFDVDSAR
Ga0209488_108406421	3300027903	Vadose Zone Soil	VAARLTVTVRQVLEDGTEVPAEEELAAALAGTAEQFAGLAAWAADEARFCDLGEREEVIGTEGRELQRRLLEATLAAGA
Ga0209415_105677271	3300027905	Peatlands Soil	VTVRFSVTVRQVREDGSEAPLGGELAAALAAPAEQFAGLAAWAAGEAGYLDHGEREKVIGDEGRELQRRLLQATFDIDSAREERAD
Ga0209415_109379831	3300027905	Peatlands Soil	MTVRFSVTVREVRGDGSEAPLEGELAAALAGPAEQFAGLAAWAADEARYLDHGEREKVIGEEGRELQRRLLQAAFGLDAAREERAAGVTSAAGIPHGTVERGCERGL
Ga0311371_103140152	3300029951	Palsa	VTIRQVRDDGTEAEVDEDLAAALEESAEQFAGLAGWAGDESRYLDHAEREKALTDEGRELQRRLLQAT
Ga0311338_104779352	3300030007	Palsa	VARLTVTVRQVLEDGSEAAVDGELAAALEESAGQFAGLLTWAAEESRYAGHGEREEAISREGRELERRLLQATFRLDAAA
Ga0302184_103529731	3300030490	Palsa	MLGGNHSRQASGGTAVTARLSVTIRQVRDDGSEAPLDGELVAALAGPAEQFAGLAAWAAEEAGYLDHGEREKVIGEEGRELQRRLLQATFDIDAAREERA
Ga0311370_119407292	3300030503	Palsa	VAARFTVTVREVREDGSEVPLEEDLAAALAAPAEQFAGLAAWTADEARYLDHGEREKVIGEEGRELQRRLLQATFGLDAAREERAAGVTS
Ga0311372_103888072	3300030520	Palsa	VRITVTIRQVRDDGTEAEVDEDLAAALEESAEQFAGLAGWAGDESRYLDHAEREKALTDEGRELQRRLLQAT
Ga0311355_104878273	3300030580	Palsa	VRITVTIRQVRDDGTEAEVDEDLAAALEESAEQFAGLAGWAGDESRYLDHAEREKALTDEGRELQRRLLQATYELDAARRSGQRG
Ga0310039_103723622	3300030706	Peatlands Soil	VTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQ
Ga0310038_105083841	3300030707	Peatlands Soil	VTVRFSVTVRQVREDGSEAPLDGELSAALAAPAEQFAGLAAWAADEARFCDHGEREKVIGQEGRELQRRLLQATFDIDSAREERASG
Ga0265461_127319391	3300030743	Soil	VTVRFSVTVRQVREDGSEAPLDGELAAALAAPAEQFAGLAAWTADEAGYLDHGEREKVIGKEGRELQRRLLQATFDIGSAREERAGQVTSAAG
Ga0307374_106104471	3300031670	Soil	VTVRFSVTVRQVRDDGSEAPLEGEVAAALAGPAEQFAGLAAWAADEARFCDHGERETAIGQEGRELQRRLLQATFDVDAAREERAAGVTSAAG
Ga0307372_105358871	3300031671	Soil	VTVRFSVTVRQVRDDGSEAPLDGELAAALAGPAEQFAGLAAWAADEARFCDHGEREKAIGQEGRELQRRLLQATFDVDAAREERAAGVTSAAGIPHGSV
Ga0307373_105970931	3300031672	Soil	VTVRFSVTVRQVRDDGSEAPLEGEVAAALAGPAEQFAGLAAWAADEARFCDHGERETAIGQEGRELQRRLLQATFDVDAAREERAAGVTSAAGIPHGSV
Ga0318493_107210991	3300031723	Soil	VTVRFSVTIRQVRDDGSEAPLEQELAAALAAPAEQFAGLAAWAAGEAGYLDHGEREKVIGEEGRELQRRLLQATFDIDSAREERAEGVTSAARIRHGIVEDGHGRGVTSV
Ga0306925_116118221	3300031890	Soil	VTVRFSVTIRQVRDDGSEAPLEQELAAALAAPAEQFAGLAAWAAGEAGYLDHGEREKVIGEEGRELQRRLLQATFDIDSAREERAEGVTSAA
Ga0318549_104079531	3300032041	Soil	VTVRFSVTIRQVRDDGSEAPLEQELAAALAAPAEQFAGLAAWAAGEAGYLDHGEREKVIGEEGRELQRRLLQATFDIDSAREERAEGV
Ga0318545_101649271	3300032042	Soil	VTVRFSVTIRQVRDDGSEAPLQQELAAALTAPAEQFAGLAAWAAGEAGYLDHGEREKVIGEEGRELQRRLL
Ga0311301_100214687	3300032160	Peatlands Soil	VTARFSVTVRQVREDGSEVPLEGEVAAALAAPAEQFAGLAAWAASEAGYLDHGEREKAIGAEGRELQRRLLQAT
Ga0311301_125447062	3300032160	Peatlands Soil	VTVRFSVTVRQVREDGTEVPVEGELAAALAGPAEQFAGLASWAAEEARFLDHGEREDVIGQEGR
Ga0335085_123574801	3300032770	Soil	VTVRLSVTVRQVREDGTEAPLDGELAEALAGAAEQVAGLLSWTAGEAGFLDHGEREEVLGEEGRELQRRLLQATFDLDSAREQRIGQVTSAAGIPHGSVEAGH
Ga0335082_108687581	3300032782	Soil	VTARFSVTIRQVREDGSEVPLEGELAAALAAPAEQFAGLAAWAASEAGYLGHGEREKVIGAEGRELQRRLLQATFDIDAAGE
Ga0335079_120288832	3300032783	Soil	VAARLLVTVRRVLEDGSEAAADGELAAALEDSAEQFSGLLTWAAEESRYLDHGEREEAIGREGRELERRLLQAT
Ga0335079_123843671	3300032783	Soil	VTVKFSVTIRQVRDDGSEAPLEQELAAALAAPAEQFAGLAAWAAGEAGYLDHGEREKVIGEEG
Ga0335078_102180794	3300032805	Soil	VTVRFSVTVRQVRGDGSEVPLDGELAAALAGPAEQFAGLAAWTADEAGYLDHGERERVIGQEGRELQRRLLQATF
Ga0335078_103047121	3300032805	Soil	VTVRFSVTVRRVREDGSEAPLDGELAAALAAPAEQFAGLAAWAAEEARYLDLGEREEAIGREGRELQRRLLQASFDV
Ga0335078_127203701	3300032805	Soil	VAARLLVTVRRVLEDGSEAAADGELAAALEDSAEQFSGLLTWAAEESRYLDHGEREEAIGREGRELERRLLQATFRLDAAREER
Ga0335078_127403181	3300032805	Soil	VAARLMVTVRQVLEDGSEAAVDGELATALADSAEQFSGLLTWAAEESRYLDHGEREEAIMREGRELERRLLQATFRLDAALEERALQVTS
Ga0335080_122376732	3300032828	Soil	VAVRFSVTIRQVREDGSEVPLEGELAAALAAPAEQFAGLAAWAAEEAGYLDHGEREKVIGAEGRELQRRLL
Ga0335081_115872431	3300032892	Soil	VTVRLLVTIRQVHEDGTEVPADGELAAALAGPAEQFAGLLSWAADESGFLDHGEREAAIGTEGRELQRRLLQATFDLDTAREERIAQVTSAAGIPHGSV
Ga0335083_101895761	3300032954	Soil	VTVRFSVTIRQVREDGSEAPLDGELAAALAGPAEQFAGLAAWTAEEAGYLDHGEREKAIGQEGRELQAATG
Ga0335077_108442652	3300033158	Soil	VTARFTVTVRQVLDDGSEAPLEGEVAAALAAPAEQFAGLAAWAADEARYLDHGEREMVIGDEGRELQRLVLQAAFDIDAAREERAAGVTSAAGIGHGIVE
Ga0335077_120224351	3300033158	Soil	VAARLLVTVRRVLEDGSEAAADGELAAALEDSAEQFSGLLTWAAEESRYLDHGEREEAIGREGRELERRLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060758

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences