Metagenome / Metatranscriptome Family F060413

Basic Information
Family ID	F060413
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	45 residues
Representative Sequence	MSQGMSPEFALGYRAMMLDGITREAEITKKVIAAVPDAASSYKP
Number of Associated Samples	119
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.90 %
% of genes near scaffold ends (potentially truncated)	96.24 %
% of genes from short scaffolds (< 2000 bps)	89.47 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (93.985 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.023 % of family members)
Environment Ontology (ENVO)	Unclassified (19.549 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.887 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.67% β-sheet: 0.00% Coil/Unstructured: 58.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01063	Aminotran_4	79.70
PF00072	Response_reg	0.75
PF02604	PhdYeFM_antitox	0.75
PF13231	PMT_2	0.75
PF04552	Sigma54_DBD	0.75
PF13200	DUF4015	0.75
PF05163	DinB	0.75
PF01566	Nramp	0.75
PF13407	Peripla_BP_4	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	159.40
COG1508	DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog	Transcription [K]	0.75
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.75
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.75
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.74 %
Unclassified	root	N/A	5.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.74 %
Unclassified	root	N/A	5.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.98 %
Unclassified	root	N/A	5.26 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	88.72 %
Unclassified	root	N/A	5.26 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	78.20 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.02 %
Unclassified	root	N/A	5.26 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.76 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.76 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.50 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.20 %
Unclassified	root	N/A	5.26 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10188186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300001356\|JGI12269J14319_10175514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300001471\|JGI12712J15308_10086299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300001867\|JGI12627J18819_10246746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300002245\|JGIcombinedJ26739_100129100	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300004082\|Ga0062384_100177527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1235	Open in IMG/M
3300004091\|Ga0062387_101610344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	524	Open in IMG/M
3300004092\|Ga0062389_102698631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300004092\|Ga0062389_104363047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300004631\|Ga0058899_12279336	All Organisms → cellular organisms → Bacteria → Acidobacteria	1198	Open in IMG/M
3300004635\|Ga0062388_101901798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300005167\|Ga0066672_10605629	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300005184\|Ga0066671_10155929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1336	Open in IMG/M
3300005345\|Ga0070692_10078565	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300005437\|Ga0070710_11167254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300005437\|Ga0070710_11422862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	519	Open in IMG/M
3300005439\|Ga0070711_100483943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300005439\|Ga0070711_101565514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300005518\|Ga0070699_101666655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005529\|Ga0070741_11042564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300005548\|Ga0070665_100140435	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300005568\|Ga0066703_10754528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300005569\|Ga0066705_10727391	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300005591\|Ga0070761_10558636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300005607\|Ga0070740_10276830	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300005616\|Ga0068852_100463894	Not Available	1256	Open in IMG/M
3300006028\|Ga0070717_10003539	All Organisms → cellular organisms → Bacteria	11199	Open in IMG/M
3300006102\|Ga0075015_100086719	All Organisms → cellular organisms → Bacteria → Acidobacteria	1551	Open in IMG/M
3300009521\|Ga0116222_1418629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300009522\|Ga0116218_1396919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300009616\|Ga0116111_1023400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2110	Open in IMG/M
3300009683\|Ga0116224_10242571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300010339\|Ga0074046_10752850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300010358\|Ga0126370_11646081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300010373\|Ga0134128_11762372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300010379\|Ga0136449_101462715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300010379\|Ga0136449_103040185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300010398\|Ga0126383_10966506	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300011120\|Ga0150983_12021668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1276	Open in IMG/M
3300011120\|Ga0150983_12289027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300012210\|Ga0137378_10022910	All Organisms → cellular organisms → Bacteria	5493	Open in IMG/M
3300012354\|Ga0137366_11147719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300012929\|Ga0137404_12123826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300012930\|Ga0137407_12274837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300013100\|Ga0157373_10214270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1358	Open in IMG/M
3300016404\|Ga0182037_10752610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300017822\|Ga0187802_10102282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300017822\|Ga0187802_10173809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300017823\|Ga0187818_10227332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300017924\|Ga0187820_1316082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300017928\|Ga0187806_1155229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300017936\|Ga0187821_10268236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300017946\|Ga0187879_10005985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8013	Open in IMG/M
3300017948\|Ga0187847_10271684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300017948\|Ga0187847_10519787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300017959\|Ga0187779_10103894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1714	Open in IMG/M
3300017972\|Ga0187781_11301347	Not Available	536	Open in IMG/M
3300017972\|Ga0187781_11473121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300018006\|Ga0187804_10083918	Not Available	1291	Open in IMG/M
3300018012\|Ga0187810_10459634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300018043\|Ga0187887_10910699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300018046\|Ga0187851_10037130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3269	Open in IMG/M
3300018057\|Ga0187858_10885484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300018085\|Ga0187772_10108617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1795	Open in IMG/M
3300018086\|Ga0187769_11103252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300018090\|Ga0187770_10475824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300019278\|Ga0187800_1712810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300019278\|Ga0187800_1790193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266	Open in IMG/M
3300021171\|Ga0210405_11346844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300021402\|Ga0210385_10663082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300021406\|Ga0210386_10214947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1632	Open in IMG/M
3300021406\|Ga0210386_10447569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300021406\|Ga0210386_11208716	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	639	Open in IMG/M
3300021433\|Ga0210391_10064224	All Organisms → cellular organisms → Bacteria	2910	Open in IMG/M
3300021474\|Ga0210390_10307920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1342	Open in IMG/M
3300021477\|Ga0210398_10668637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300021479\|Ga0210410_10193085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1823	Open in IMG/M
3300022505\|Ga0242647_1005721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300022528\|Ga0242669_1066401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300022733\|Ga0224562_1002166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1436	Open in IMG/M
3300024271\|Ga0224564_1082676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300025320\|Ga0209171_10187318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300025463\|Ga0208193_1085969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300025906\|Ga0207699_10747834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300025916\|Ga0207663_10849988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300026088\|Ga0207641_11340161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300026142\|Ga0207698_12571667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300026557\|Ga0179587_10255551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1122	Open in IMG/M
3300026916\|Ga0208066_100904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300027164\|Ga0208994_1043044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300027842\|Ga0209580_10335258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300027853\|Ga0209274_10758685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300027884\|Ga0209275_10559530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300027986\|Ga0209168_10625986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300028047\|Ga0209526_10281982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1129	Open in IMG/M
3300028747\|Ga0302219_10203630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300028759\|Ga0302224_10376991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300028866\|Ga0302278_10379137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300028906\|Ga0308309_11733977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300029915\|Ga0311358_10540374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300029922\|Ga0311363_11561043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300029943\|Ga0311340_10721964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300030399\|Ga0311353_11266268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300030659\|Ga0316363_10441365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300030706\|Ga0310039_10079138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1402	Open in IMG/M
3300030706\|Ga0310039_10386271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300030730\|Ga0307482_1029124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1218	Open in IMG/M
3300031040\|Ga0265754_1032314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300031057\|Ga0170834_108371293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300031231\|Ga0170824_104287304	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1991	Open in IMG/M
3300031474\|Ga0170818_115258415	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300031715\|Ga0307476_10301240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300031753\|Ga0307477_10340084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300031754\|Ga0307475_11116560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300031820\|Ga0307473_10566465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300031823\|Ga0307478_11674629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300031823\|Ga0307478_11775066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300031910\|Ga0306923_12243904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300031962\|Ga0307479_10549808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300032160\|Ga0311301_11010505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300032261\|Ga0306920_103208990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300032783\|Ga0335079_10737374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300032805\|Ga0335078_11520313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300032895\|Ga0335074_11613270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300032954\|Ga0335083_10115342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2610	Open in IMG/M
3300032955\|Ga0335076_10460198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300033004\|Ga0335084_11658585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300033134\|Ga0335073_11561248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300033824\|Ga0334840_049840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1248	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.24%
Host-Associated	Host-Associated	3.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.20%
Aquatic	Environmental → Aquatic	18.05%
Plants	Host-Associated → Plants	3.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.18%
Freshwater	Environmental → Aquatic → Freshwater	16.54%
Peat	Environmental → Terrestrial → Peat	6.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.75%
Sediment	Environmental → Aquatic → Sediment	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.11%
Loam	Environmental → Terrestrial → Soil → Loam	17.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.26%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.50%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.02%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.27%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.02%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.51%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.51%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.01%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.26%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.50%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.50%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.75%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026916	Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN109 (SPAdes)	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060413

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101881862	3300000567	Peatlands Soil	MSEQCMTPEFAQGYCAMTLDGIMREAEITKKVIAAVPDAAS
JGI12269J14319_101755142	3300001356	Peatlands Soil	MSHGLTPEFVLGYRAMMLDGLNREAEITEKVIAAVPDAKSDYK
JGI12712J15308_100862991	3300001471	Forest Soil	MSQGLTPEFALGYRAMMVDGITREVETTKKVISAVPDAASSFKPDPVARSAKDL
JGI12627J18819_102467462	3300001867	Forest Soil	MSQMTPEFALGFRAAMLDSFKNEAEITKRVIAAIPDAKSDYRPDPNA
JGIcombinedJ26739_1001291005	3300002245	Forest Soil	MSQGMSPEFALGYRAMMLDGITREAEITKKVIAAVPDAASSYKPDPKARTAKE
Ga0062384_1001775272	3300004082	Bog Forest Soil	MSQQGLTPEFAQGYCAMTLDGILREAEITKKVIAAVPDAA
Ga0062387_1016103441	3300004091	Bog Forest Soil	MSQQPTPEFVLGFRAVMLDGFKREAETTKKVIAAVPDAKSDYRPDP
Ga0062389_1026986311	3300004092	Bog Forest Soil	MSEQGLTPEFARSYCAMTLGGILREVELTKKVIGAVPDAASSYKPDPK
Ga0062389_1043630472	3300004092	Bog Forest Soil	MSAPQGFTPEFAAGYCAMMLDGIAREAEVTKKVIAAVPDAASSYK
Ga0058899_122793362	3300004631	Forest Soil	MSQGMSPEFALGYCAMMLDGITREAEITKKVIAAVPDAASSYKPDPKARTAKEL
Ga0062388_1019017982	3300004635	Bog Forest Soil	MSEQGLTPEFAKGYCVVTLDGIMREAETTKRVIAAVPDTAS
Ga0066672_106056291	3300005167	Soil	MSEQQGLTAEFAQGYRAMTLDGITREAEITKKVIAAVPDAASSYRPD
Ga0066671_101559291	3300005184	Soil	MSQGLTPEFAEGYRWMMLDGIKREAEITKKVLAAIPDAKSDYKPDPH
Ga0070692_100785651	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MATAQQGPTPEFALGMREMMLDGIAREVEITKKVLAAVPDDKADYRPDPH
Ga0070710_111672541	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSQGLTPEFALGYRAMMLDSITREAECTKKVIAAVPDAKS
Ga0070710_114228622	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSQGMTPEFAAGLRALMLDGIEREAECTKRVIAAVPDTKSDYR
Ga0070711_1004839431	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSQGLTPDFILGYRAMMLDGIAREAECTKKVIAAVPDAKSDY
Ga0070711_1015655142	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSQGLTPEFAAGLRAMMLDGIAREAEITKRVIGAVPDAKSEYRPD
Ga0070699_1016666552	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSQGLTPEFVLCYRAMMLDGIAREAEVTKKVIGAIPDAKSDYRPDPNART
Ga0070741_110425642	3300005529	Surface Soil	MSQGMTPEFAAGLCAMMLDGIQREAECTKRVLAAVPDDK
Ga0070665_1001404351	3300005548	Switchgrass Rhizosphere	MSQGLTPEFAMGYRAMMLDSIKREAEITKKVFAAIPDAKSD
Ga0066703_107545281	3300005568	Soil	MSQGLTPDFILGYRAMMLDGIAREAECTKKVIAAVPD
Ga0066705_107273911	3300005569	Soil	MSQGLTPEFVLGYRAMMLDGITREAEITKKIIAAVPDAASSYKPDP
Ga0070761_105586361	3300005591	Soil	MSHQGLTPEFAQGYCAMSLDGILREAETTKKVIAAVPDAASS
Ga0070740_102768301	3300005607	Surface Soil	MSQGMTPEFVLGYRAMMLDGITREAETTKKVLAAVPDDKADYR
Ga0068852_1004638941	3300005616	Corn Rhizosphere	MSQGLTPEFAMGYRAMMLDSIMREAEITKKVFAAIPDAKSDYKPDPHAR
Ga0070717_1000353914	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSQMTPEVALGYRAITLDGFKNEVEITKKVIAAVPDAKSDY
Ga0075015_1000867191	3300006102	Watersheds	MSQGLTPEFVLGYRAMMLDGITREAEITKKVIAAVPDENSHYK
Ga0116222_14186291	3300009521	Peatlands Soil	MSHGLTPEFVLGYRAMMLDGLNREAEITEKVIAAVPDAKSDYKPD
Ga0116218_13969192	3300009522	Peatlands Soil	MTPEFVLGLRAVMLEGFKNEAEITKKVIAAIPDAKSDYR
Ga0116111_10234001	3300009616	Peatland	MSQQGLTPEFAIGYRDLMLDGFKNEAEVTKKVIAAVPV
Ga0116224_102425712	3300009683	Peatlands Soil	MPDMTPEFALGLRAVMLDGFKMEAEITKKVIAAVPDAKSDYRPDP
Ga0074046_107528502	3300010339	Bog Forest Soil	MSQGLTPEFASGYCAMMLDGITREAEITKKVIAAVPDAASSY
Ga0126370_116460812	3300010358	Tropical Forest Soil	MTPEFALGLRAMMLDGILREAECTKRVIGAVPDAKADY
Ga0134128_117623722	3300010373	Terrestrial Soil	MTPDFAAGLCAMMLDGIQREAECTKRVLAAVPDDKSDYRPDPNARTAREL
Ga0136449_1014627152	3300010379	Peatlands Soil	MSEQQGLTAEFAQGYCAMTLDGILREAEITKKVIAAVPDAASSYRPDPNAR
Ga0136449_1030401851	3300010379	Peatlands Soil	MSHGLTPEFALGYRAMMLDGINREAQTTRRVIAAIPD
Ga0126383_109665062	3300010398	Tropical Forest Soil	MSQGLTPEFALGMRAVMLDGIAREAECTKRVLSAVPDGASD*
Ga0150983_105123072	3300011120	Forest Soil	MNPEFAIGLCHMMIDGVTRELETTKKVLAAIPDNKTDYKPDPHTRTAFEL
Ga0150983_120216682	3300011120	Forest Soil	MSAPQGFTSEFAVGYRALMLGGIVREAEVTRKVIAAVPD
Ga0150983_122890271	3300011120	Forest Soil	MSQGLTPEFVLGYRAMMLDGITREAEITKKVIAAVPD
Ga0137378_100229101	3300012210	Vadose Zone Soil	MTPEFALGYRAVTLEGFKNEVEITKKVIAAVPDAKSDY
Ga0137366_111477191	3300012354	Vadose Zone Soil	MTPEFALGYRAVTLEGFKNEVEITKKVIAAVPDAKSDYRPDPCARS
Ga0137404_121238261	3300012929	Vadose Zone Soil	MSEQQGMSPEFALGFRAVMLDGVMREVEITKKVIGAVPDAASSYKPDPNAR
Ga0137407_122748372	3300012930	Vadose Zone Soil	MSPEFVLGYRAVLLDGLTREAEITKKVIAAIPDGASSYKPD
Ga0157373_102142703	3300013100	Corn Rhizosphere	MTPEFAAGLCAMMLDGIQREAECTKRVLAAVPDDKSDYRPDPNA
Ga0182037_107526102	3300016404	Soil	MSPGLTPEFALGFRGTMLDGIAREAEITKRVIGAVPEAASEYR
Ga0187802_101022821	3300017822	Freshwater Sediment	MSHQGLSPEFALAYRAMMLDGILREAECTKKVIAAVPDAQS
Ga0187802_101738092	3300017822	Freshwater Sediment	MSQGMTPEFVLGYRAMMLDGIAREAECTKKIIAAVPDAKSDYKPDPHARTAKE
Ga0187818_102273322	3300017823	Freshwater Sediment	MHAPTPEFVAAYRAMMLDGVTREAEITKKVIAAVPDSKSSYRPDP
Ga0187820_13160822	3300017924	Freshwater Sediment	MSQMTPEFALGYRAAMLASFKNEAEITKKVIAAIPDAKSDYRPDP
Ga0187806_11552292	3300017928	Freshwater Sediment	MSQGLTPDFVLGYRAMMLDGIAREAECTKRVIAAVPDAKSDYR
Ga0187821_102682362	3300017936	Freshwater Sediment	MSQMTPEVALGYRAITLDGFKNEVEITKKVIAAVPDAKSDYRPDA
Ga0187879_100059858	3300017946	Peatland	MSDQQGITPEFALGYCAMTLDGILREAEITKKVIAAVPDAASSYRPDP
Ga0187847_102716841	3300017948	Peatland	MSDQQDITREFALGYCAMTLDGILREAEITKKVIAAVPDAASSYRPDPKARTAKE
Ga0187847_105197872	3300017948	Peatland	MSQQGMTPEFALGYCAMMLDGIQREAESTKRVIAAIPDEKSEYRHDPNGRTAK
Ga0187817_100636021	3300017955	Freshwater Sediment	MATAQQALTPEMAAGFRAVMLDGVTRELEITKKVLSAIPDAKANYRPDPHARTAWELAWH
Ga0187779_101038943	3300017959	Tropical Peatland	MSQGMTPEFVLGYRAMMLDGIQREAEITKKVIAAVPDAASSYKPDPNA
Ga0187781_113013471	3300017972	Tropical Peatland	MSQHGVTPEFALGYCAMMLDGITREAECTKKVIAAIPDAKSD
Ga0187781_114731212	3300017972	Tropical Peatland	MSQGMTPEFVLAYRAMMLNGIAREAECTKKIIAAVPDANSDYKPDPHARTAK
Ga0187804_100839182	3300018006	Freshwater Sediment	MHAPTPDFVAAYRTLMLDGVTREAEITKKVIAAVPDSKSGYRPDPCARTAWEL
Ga0187810_104596342	3300018012	Freshwater Sediment	MSEQGLTAEFAQGYCAMTLDGILREAEITKKVIAAVPDAASSYKPDPNARSAK
Ga0187887_109106991	3300018043	Peatland	MSQQGMTPEFALGYCATMLDGIQREAESTKRVIPAIPDEKSEYRHDPNGRT
Ga0187851_100371301	3300018046	Peatland	MSDQQGITPEFALGYCAMTLDGILREAEITKKVIAAVPDAASSYRPDPNARTA
Ga0187858_108854842	3300018057	Peatland	MSQQGMSPEFALGYRAMMLDGITREAEITKKVIAAVPDAASSYKP
Ga0187772_101086173	3300018085	Tropical Peatland	MSAQALTPEFAAAYCAMMIDGITREAEITKKVIAA
Ga0187769_111032522	3300018086	Tropical Peatland	MSQGMTPEFALGYRAMMLDGVLREAEVTKKVIAAVPDAKSDYRHDPNG
Ga0187770_104758241	3300018090	Tropical Peatland	MSQGLTPEFALGYRARMLEGLNREAETTKRVIAAVPD
Ga0187800_17128102	3300019278	Peatland	MSAQQGLTPEFAAVYCAMMLDGISREAEITKKVIAAVPDAASGYRPDPCSRTAKELA
Ga0187800_17901932	3300019278	Peatland	MSEQGFTPEFAQTYCAMMLDGILREVEITKKVIAAVPDAASHYKPDPN
Ga0187797_16193472	3300019284	Peatland	MATAQQGLTPEFAMGFCQMMLDGVSREQEITRKVIAAIPDARSDYKPDPHA
Ga0210401_106130162	3300020583	Soil	MADSQQALTPELAAAFCAVMLDGVTREMEVTKKVLAAIPDAKAQYKPDPNARTAWQLAWH
Ga0210405_113468441	3300021171	Soil	MSEGLTPDFVLAYRAMMLDGIQREAECTKRVISAVPDEKSDYRPDPKAR
Ga0210385_106630821	3300021402	Soil	MSQITPEFVLGLRTLMLDGFKRETEITKKVIAAVPDAK
Ga0210386_102149473	3300021406	Soil	MSEQGLTPEFAQGYCAMTLDGILREAEITKKVIAAVPDA
Ga0210386_104475692	3300021406	Soil	MSQITPEFVLGLRTLMLDGFKRETEITKKVIAAVPDAKS
Ga0210386_112087162	3300021406	Soil	MSQGLTPEFVLGYRAMMLDGIAREAEITKKVIGAVPDAKAEHRPDPHA
Ga0210391_100642241	3300021433	Soil	MSQITPEFVLGLRTLMLDGFKRETEITKKVIAAVPDA
Ga0210390_103079202	3300021474	Soil	MSQGLTPDFILGYRAMMLDGIAREAECTKKVIAAVPDAKSDYRPDAH
Ga0210398_106686371	3300021477	Soil	MSAQQGLTPEFALGYCAMTLDGILREAEITKKVIAAVPDAASSYKHDPNG
Ga0210410_101930852	3300021479	Soil	MSQGMSPEFALGYRAMMLDGIVREAQVTKKVIAAVPDASSSYKPDPCAR
Ga0242647_10057211	3300022505	Soil	MSEQGLTPEFAQGYCAMTLDGILREAEITKKVIAAV
Ga0242669_10664011	3300022528	Soil	MSEQGLTPEFAQGYCAMTLDGILREAEITKKVIAAVPDAASSYKPDPKARTAKEL
Ga0224562_10021661	3300022733	Soil	MSDQQGLTPEFALGFRAVMLDGVTRELELTKKVLAAIPDAKSDYRPDPS
Ga0224564_10826761	3300024271	Soil	MSEQQGLTAEFAQGYCAMTLDGIMREAEITKKIIAAVPDAASSYK
Ga0209171_101873182	3300025320	Iron-Sulfur Acid Spring	MSQGMTPEFAQGYCAMMVDGIMREAEITKKIIAAVPDAASSYKP
Ga0208193_10859691	3300025463	Peatland	MSAQQGLTPEFALGYCAMMLDGITREAEITKKVIAAVPDAASGYKSDPCAR
Ga0207699_107478341	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSQGMTPEFAAGLCAMMLDGIQREAECTKRVLAAVPDDKSDYRPDPNARTAR
Ga0207663_108499882	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSQGMTPEFAAGLCAMMLDGIQREAECTKRVLAAVPD
Ga0207641_113401611	3300026088	Switchgrass Rhizosphere	MSQGLTPEFAMGYRAMMLDSIKREAEITKKVFAAIPDAKSDYKPD
Ga0207698_125716671	3300026142	Corn Rhizosphere	MSQGLTPEFAMGYRAMMLDSIMREAEITKKVFAAIPDAKSDYKPDPHARTGWE
Ga0179587_102555512	3300026557	Vadose Zone Soil	MSQQGLSPEFVLGYRAVMLDGLTREAEITKKVIAAVPDAASSYKPDAN
Ga0208066_1009041	3300026916	Soil	MSQQGLSPEFALGYRAVLLDGFTREAEITKKVIAA
Ga0208994_10430441	3300027164	Forest Soil	MSQGLTPEFALGYRAMMVDGITREVETTKKVISAVPDAAS
Ga0209580_103352582	3300027842	Surface Soil	MSQGMSPEFALGYRAMMLDGIVREAEVTRKVIAAIPDA
Ga0209274_107586852	3300027853	Soil	MSQGMSPEFALGYCAMMLNGITREAEITKKVIAAVPDAASSYKPDPHARTAK
Ga0209275_105595301	3300027884	Soil	MSQGMSPEFALGYRAMMLDGITREAEITKKVIAAVPDAASSYKP
Ga0209168_106259861	3300027986	Surface Soil	MSAQECLTAEFVTGYRAMMLDGIMREAEITKKVIAAVPEA
Ga0209526_102819821	3300028047	Forest Soil	MSDQGMTPEFAQGYCAMMLDGIMREAEITKKIIAAVP
Ga0302219_102036302	3300028747	Palsa	MSQGMSPEFALGYCAMMLDGITREAEITKKVIAAVPDAASSYKPDPKART
Ga0302224_103769911	3300028759	Palsa	MSQGMSPEFALGYCAMMLDGITREAEITKKVIAAVPDAASSYKPDPKARTAK
Ga0302278_103791371	3300028866	Bog	MSNQQGITPEFALGYCAMTLDGILREAEITKKVIAAVPDAASSYR
Ga0308309_117339772	3300028906	Soil	MSQQGMTPEFALGYCAMMLDGIQREAECTKRVIAAVPDEKSDYRHDPNGRTAKDL
Ga0311358_105403742	3300029915	Bog	MSDQQGITPEFALGYCAMTLDGILREAETTKKVIAAVPDAASSYRPDP
Ga0311363_115610432	3300029922	Fen	MSNQQGITPEFALGYCAMTLDGILREAEITKKVIAAVPDAASSYRPDPKARTAK
Ga0311340_107219642	3300029943	Palsa	MSQGMSPEFALGYRAMMLDGITREAEITKKVIAAVPDAASSY
Ga0311353_112662681	3300030399	Palsa	MTEQQAQGMPAEFALGYRQMMLDGLSRELEITKKVIAA
Ga0316363_104413651	3300030659	Peatlands Soil	MSEQQGLTAEFAQGYCAMTLDGILREAEITKKVIAAVPDAAS
Ga0310039_100791382	3300030706	Peatlands Soil	MSQGMSPEFALGYRAMMLDGIQREAEVTKKVIAAVPDAA
Ga0310039_103862711	3300030706	Peatlands Soil	MSHGLTPEFALGYRAMMLDGINREAQTTRRVIAAIP
Ga0307482_10291242	3300030730	Hardwood Forest Soil	MSQQGLTPEFALGYRAMMLDGIVREAEVTKRVIAAVPDAASSYKPDPNA
Ga0265754_10323141	3300031040	Soil	MSQGMSPEFALGYRAMMLDGITREAETTKKVIAAVPDSASSYKPDPVARTAKEL
Ga0170834_1083712932	3300031057	Forest Soil	MSQGLTPEFALGYRAMMVDGITREVETTKKVISAVPDAASSFKP
Ga0170824_1042873041	3300031231	Forest Soil	MSQPTGISTEVALGYRAIMVDGFRREIETTKKVIAAIPDTQS
Ga0170818_1152584153	3300031474	Forest Soil	MSQGLTPDFILGYRAMMLDGIAREAECTKKVIAAVPDAKSDYRPDPHA
Ga0307476_103012402	3300031715	Hardwood Forest Soil	MSQGLTPEFVLGYRAMMLDGITREAEITKKVIAAVPDAASGYKPDPN
Ga0307477_103400842	3300031753	Hardwood Forest Soil	MSQGLTPEFVLGYRAMMLDGITREAEVTKKVIAAVPDAASN
Ga0307475_111165601	3300031754	Hardwood Forest Soil	MSQQGLTPEFALGYRAMMLDGIVREAEVTKRVIAAVPDAASS
Ga0307473_105664651	3300031820	Hardwood Forest Soil	MSQGLTPDFILGYRAMMLDGIAREAECTKKVIAAVPDAKSDYRPDPHARTA
Ga0307478_116746292	3300031823	Hardwood Forest Soil	MSQQGLTPEFVLGYRAMMLDGITREAEITKKVIAAVPDAASSYKPDPN
Ga0307478_117750661	3300031823	Hardwood Forest Soil	MSQGLTPEFALGYRAMMLDGVVREAATTQKVISAIPD
Ga0306923_122439042	3300031910	Soil	MSQGLTPEFALGFRGTMLDGIAREAEITKRVIGAVPEAASEYRP
Ga0307479_105498082	3300031962	Hardwood Forest Soil	MSQSLTPDFILGYRAMMLDGIAREAECTKKVIAAVPD
Ga0311301_110105051	3300032160	Peatlands Soil	MSEQGLTPEFAQGYCAMTLDGILREAETTKKVIAAVPDA
Ga0306920_1032089901	3300032261	Soil	MSQGLTPEFALGFRAVMLDGIAREAECTKRVIGAVPEAGSDYRPDPHARNAKEL
Ga0335079_107373741	3300032783	Soil	MSQGLTPEFALGLRAMMLDGFLREAEVTKKVLAAVPDAKSDYKPDPHAR
Ga0335078_115203131	3300032805	Soil	MSQGLTPEFALGYRAMMLDGIQREAECTKKVIAAIPDTQSDYRP
Ga0335074_116132701	3300032895	Soil	MSQQGLSPEFALAYRAMMLDGIVREAETTKKVITAVPDAQS
Ga0335083_101153421	3300032954	Soil	MSQQPTPEFVLGLRAYLLEGFKNEAEITKKVIGAVPDAKSD
Ga0335076_104601981	3300032955	Soil	MSEGMTPEFALGYRAVMLEGIQREAEVTKKVIRAVP
Ga0335084_116585851	3300033004	Soil	MSQALTPEFAAGLRALMLDGIAREAEITKRVIGAVPDAKSEYR
Ga0335073_115612481	3300033134	Soil	MSQQGLSPEFALAYRAMMLDGIVREAETTKKVITAVPDAQSHYKPDPHARTAMELASHLA
Ga0334840_049840_1129_1248	3300033824	Soil	MSDQQGITPEFALGYCAMTLDGILREAETTKKVIAAVPDA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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