Metagenome / Metatranscriptome Family F060143

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060143
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	58 residues
Representative Sequence	MHRAHRYIASLFLTAALAAPVSMMAAPVPQEGVQVRVYDRDHKDYHNWDD
Number of Associated Samples	101
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.21 %
% of genes near scaffold ends (potentially truncated)	91.73 %
% of genes from short scaffolds (< 2000 bps)	84.21 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.714 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.820 % of family members)
Environment Ontology (ENVO)	Unclassified (30.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.925 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 29.49% β-sheet: 0.00% Coil/Unstructured: 70.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF14534	DUF4440	5.26
PF02627	CMD	1.50
PF03551	PadR	1.50
PF00027	cNMP_binding	1.50
PF00691	OmpA	1.50
PF01977	UbiD	1.50
PF00378	ECH_1	0.75
PF13732	DUF4162	0.75
PF01300	Sua5_yciO_yrdC	0.75
PF00180	Iso_dh	0.75
PF00144	Beta-lactamase	0.75
PF10067	DUF2306	0.75
PF00436	SSB	0.75
PF05491	RuvB_C	0.75
PF07676	PD40	0.75
PF13738	Pyr_redox_3	0.75
PF07719	TPR_2	0.75
PF13649	Methyltransf_25	0.75
PF00069	Pkinase	0.75
PF07730	HisKA_3	0.75
PF00326	Peptidase_S9	0.75
PF12867	DinB_2	0.75
PF07366	SnoaL	0.75
PF01425	Amidase	0.75
PF00578	AhpC-TSA	0.75
PF14520	HHH_5	0.75
PF00190	Cupin_1	0.75
PF00496	SBP_bac_5	0.75
PF00196	GerE	0.75
PF00149	Metallophos	0.75
PF11752	DUF3309	0.75
PF00107	ADH_zinc_N	0.75
PF02922	CBM_48	0.75
PF08308	PEGA	0.75
PF02652	Lactate_perm	0.75
PF13545	HTH_Crp_2	0.75
PF00118	Cpn60_TCP1	0.75
PF01156	IU_nuc_hydro	0.75
PF13620	CarboxypepD_reg	0.75
PF07238	PilZ	0.75
PF04972	BON	0.75
PF03404	Mo-co_dimer	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.01
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	1.50
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.50
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.50
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.50
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.50
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.50
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.75
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.75
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.75
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.75
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.75
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.75
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	0.75
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	0.75
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.75
COG1620	L-lactate permease	Energy production and conversion [C]	0.75
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.75
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.17 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	45.11 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.54 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.11 %
Unclassified	root	N/A	14.29 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.28 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.51 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.11 %
Unclassified	root	N/A	14.29 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11.28 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	3.76 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.11 %
Unclassified	root	N/A	14.29 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	6.77 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3.01 %
Paludibaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum	0.75 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.75 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.11 %
Unclassified	root	N/A	14.29 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	6.02 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.01 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.75 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.75 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.75 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.11 %
Unclassified	root	N/A	14.29 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	6.02 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.01 %
Granulicella sp. dw_53	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	0.75 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.75 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.75 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1029059	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300002245\|JGIcombinedJ26739_101687956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	532	Open in IMG/M
3300002909\|JGI25388J43891_1061660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	566	Open in IMG/M
3300004080\|Ga0062385_10663328	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300004082\|Ga0062384_100880924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300004092\|Ga0062389_100044060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3492	Open in IMG/M
3300004092\|Ga0062389_103175438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300005434\|Ga0070709_11590371	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005591\|Ga0070761_10002751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10704	Open in IMG/M
3300005591\|Ga0070761_10793958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	595	Open in IMG/M
3300005602\|Ga0070762_10012712	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4263	Open in IMG/M
3300005921\|Ga0070766_10478893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300005921\|Ga0070766_10600805	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005921\|Ga0070766_11101079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005950\|Ga0066787_10046335	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300006052\|Ga0075029_101245621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300006176\|Ga0070765_101638301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300006893\|Ga0073928_10079550	All Organisms → cellular organisms → Bacteria	2811	Open in IMG/M
3300006893\|Ga0073928_10224312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1454	Open in IMG/M
3300006893\|Ga0073928_10568253	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300009839\|Ga0116223_10706759	Not Available	578	Open in IMG/M
3300010343\|Ga0074044_10203166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1316	Open in IMG/M
3300010379\|Ga0136449_104559756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300013832\|Ga0120132_1086187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300014199\|Ga0181535_10669340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300014489\|Ga0182018_10144814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1361	Open in IMG/M
3300014489\|Ga0182018_10196155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300014489\|Ga0182018_10203863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300014654\|Ga0181525_10485107	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300015082\|Ga0167662_1016251	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300017822\|Ga0187802_10441479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300018009\|Ga0187884_10373248	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300018034\|Ga0187863_10755825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300018044\|Ga0187890_10091087	All Organisms → cellular organisms → Bacteria → Acidobacteria	1777	Open in IMG/M
3300019788\|Ga0182028_1521809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1885	Open in IMG/M
3300020579\|Ga0210407_10557448	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300020579\|Ga0210407_11369164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300020579\|Ga0210407_11419096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300020580\|Ga0210403_10665300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300020580\|Ga0210403_11324559	Not Available	549	Open in IMG/M
3300020582\|Ga0210395_10313258	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300020583\|Ga0210401_10152628	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300020583\|Ga0210401_10338639	All Organisms → cellular organisms → Bacteria → Acidobacteria	1366	Open in IMG/M
3300020583\|Ga0210401_10368974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1297	Open in IMG/M
3300021088\|Ga0210404_10321985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300021088\|Ga0210404_10788297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300021171\|Ga0210405_10473504	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300021178\|Ga0210408_10029641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4330	Open in IMG/M
3300021178\|Ga0210408_11143994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	597	Open in IMG/M
3300021180\|Ga0210396_11563166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300021180\|Ga0210396_11661973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300021180\|Ga0210396_11683801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300021401\|Ga0210393_10324870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	1251	Open in IMG/M
3300021403\|Ga0210397_10230421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1336	Open in IMG/M
3300021404\|Ga0210389_11188484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300021406\|Ga0210386_11674228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300021407\|Ga0210383_11503121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300021420\|Ga0210394_10603150	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300021420\|Ga0210394_11356314	Not Available	606	Open in IMG/M
3300021432\|Ga0210384_10122340	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300021433\|Ga0210391_10703268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	792	Open in IMG/M
3300021433\|Ga0210391_11414453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	534	Open in IMG/M
3300021474\|Ga0210390_11190599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300021478\|Ga0210402_10472674	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300021478\|Ga0210402_10669919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300021478\|Ga0210402_11910692	Not Available	519	Open in IMG/M
3300021479\|Ga0210410_11635903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300021559\|Ga0210409_10263542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1558	Open in IMG/M
3300021559\|Ga0210409_10694343	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300021559\|Ga0210409_11651619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300022557\|Ga0212123_10479296	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300023250\|Ga0224544_1003015	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300024227\|Ga0228598_1043269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300025320\|Ga0209171_10508577	Not Available	595	Open in IMG/M
3300025527\|Ga0208714_1028369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300025986\|Ga0207658_11482848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300026291\|Ga0209890_10125670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300026551\|Ga0209648_10212111	All Organisms → cellular organisms → Bacteria → Acidobacteria	1467	Open in IMG/M
3300027334\|Ga0209529_1040766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	791	Open in IMG/M
3300027591\|Ga0209733_1112557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300027629\|Ga0209422_1101317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300027652\|Ga0209007_1019546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1753	Open in IMG/M
3300027667\|Ga0209009_1190074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300027674\|Ga0209118_1216530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300027767\|Ga0209655_10126564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	849	Open in IMG/M
3300027795\|Ga0209139_10066017	Not Available	1268	Open in IMG/M
3300027842\|Ga0209580_10188306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300027842\|Ga0209580_10661495	Not Available	516	Open in IMG/M
3300027855\|Ga0209693_10427675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300027855\|Ga0209693_10470806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300027867\|Ga0209167_10829030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300027879\|Ga0209169_10002062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12202	Open in IMG/M
3300027889\|Ga0209380_10250762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	1039	Open in IMG/M
3300027895\|Ga0209624_10459858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300027895\|Ga0209624_10866689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	591	Open in IMG/M
3300027905\|Ga0209415_10721678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300027908\|Ga0209006_11459158	Not Available	520	Open in IMG/M
3300028036\|Ga0265355_1023859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300028047\|Ga0209526_10684456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	648	Open in IMG/M
3300028536\|Ga0137415_11233432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300030054\|Ga0302182_10000923	All Organisms → cellular organisms → Bacteria → Acidobacteria	16592	Open in IMG/M
3300030058\|Ga0302179_10017248	All Organisms → cellular organisms → Bacteria	3562	Open in IMG/M
3300030520\|Ga0311372_13059691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300030580\|Ga0311355_10155100	All Organisms → cellular organisms → Bacteria → Acidobacteria	2455	Open in IMG/M
3300030737\|Ga0302310_10197562	Not Available	1178	Open in IMG/M
3300030739\|Ga0302311_10309079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	1145	Open in IMG/M
3300030906\|Ga0302314_10727988	Not Available	1007	Open in IMG/M
3300030991\|Ga0073994_10061236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2027	Open in IMG/M
3300031018\|Ga0265773_1036574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300031090\|Ga0265760_10200366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300031090\|Ga0265760_10218513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300031090\|Ga0265760_10308021	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031231\|Ga0170824_112506672	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300031344\|Ga0265316_10327005	All Organisms → cellular organisms → Bacteria → Acidobacteria	1113	Open in IMG/M
3300031525\|Ga0302326_11448227	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300031708\|Ga0310686_109432890	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	580	Open in IMG/M
3300031708\|Ga0310686_113683677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1497	Open in IMG/M
3300031708\|Ga0310686_117791273	Not Available	1046	Open in IMG/M
3300031823\|Ga0307478_10625026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300031962\|Ga0307479_11679287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300032160\|Ga0311301_11307492	Not Available	916	Open in IMG/M
3300032160\|Ga0311301_12041254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300032160\|Ga0311301_12957906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	513	Open in IMG/M
3300032174\|Ga0307470_11060060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300032180\|Ga0307471_100099329	All Organisms → cellular organisms → Bacteria	2635	Open in IMG/M
3300033547\|Ga0316212_1042491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.24%
Host-Associated	Host-Associated	3.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.95%
Aquatic	Environmental → Aquatic	17.29%
Plants	Host-Associated → Plants	3.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Freshwater	Environmental → Aquatic → Freshwater	12.78%
Peat	Environmental → Terrestrial → Peat	6.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.01%
Sediment	Environmental → Aquatic → Sediment	0.75%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.12%
Loam	Environmental → Terrestrial → Soil → Loam	18.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.26%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.28%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.51%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.02%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.27%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.02%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.51%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.51%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.01%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.26%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.75%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.75%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015082	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11c, vegetated hydrological feature)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028011	Plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE1	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10290592	3300001084	Forest Soil	MHRAHRYIASLCLTAALAAPVAMLAAPAPQDRVYDRDHK
JGIcombinedJ26739_1016879562	3300002245	Forest Soil	MHRANRYITSLFLTAALAAPVAIMAIPVPQEDRTQNRVYDKEHKDYHNWDDNENKAWGQYRS
JGI25388J43891_10616601	3300002909	Grasslands Soil	MHLSHRYIAALFLTAALVAPVAIMAAPAPQEARVQLRVYDKQHKDYHNWDDNENRAWGQYLAQNHRNSREFSKV
Ga0062385_106633281	3300004080	Bog Forest Soil	MHRVNRYIASIFLTAALVAPVATMAAPGPQATVQIRVYDSGHKDYHYWDDHEDHA
Ga0062384_1008809241	3300004082	Bog Forest Soil	MRSKSGFISSLLLTAALAAPVAIMAAAKPQEASVQVRVYDKNHKDYHNWDDNEN
Ga0062389_1000440601	3300004092	Bog Forest Soil	MHRSYRFIASLFLAAALVAPVSIMAAPAPQTSVQIRVYDRDHHDYHNWDDRED
Ga0062389_1031754382	3300004092	Bog Forest Soil	MHRPHHYLASLFLTAAIAAPISMFAAPVPQDAGVQVRVYDRSHKDYHNW
Ga0070709_115903711	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMNRACRLASSLFLAAAIAAPVSMLAAPASQDASVQVRVYDRDHKYYHNWDDNEN
Ga0070761_100027511	3300005591	Soil	MHRAHRYVASLFLTAALAVPVSMMAAPVPQEAGVQVRVYDRDHKDYHNW
Ga0070761_107939581	3300005591	Soil	MHRAHRYIASLFLTAALAAPVSMMAAPVPQEGVQVRVYDRDHKDYHNWDDHERHAWGVF
Ga0070762_100127121	3300005602	Soil	MHSIRGYIASLFLTAGLVAPVSIMAVPIPQEAHDQNRVYDKDHKDYHNWDDKENKAW
Ga0070766_104788932	3300005921	Soil	MHRIHGYIASLFLTAALAAPVSIMAVPMPQEAHDQNRVYDKDHKDYHNWDDKENKAW
Ga0070766_106008052	3300005921	Soil	MNGKHLYIASLFLTAAFVTPVAMMAAPAPQRAGVQVRVYDSGHKDYHNWDDNENHAWGLY
Ga0070766_111010791	3300005921	Soil	MHRPHHYIASFFLTAAFAAPLSIMAMPTPQEAGLQVRVYDRRHRDYHNWDDNENR
Ga0066787_100463351	3300005950	Soil	MHIAHRYISSIFLAAALVAPASIIAAPKPQDVQVRVYDRDHKDYHNWDDHENAA
Ga0075029_1012456211	3300006052	Watersheds	MHLAHRYVASLFLTAALAAPVAIMAAPVPQEASVQVRVYDKDHKDYHDWNENENRAWGQFQTDNHQKHYEFSKAN
Ga0070765_1016383011	3300006176	Soil	MRSKSVFISSLLLTAALAAPVAIMAAARPQEASVQVRVYDKNHKDYHNWDDNENRAWGQFLSDNHRDHHEYAKSNKKEQA
Ga0073928_100795504	3300006893	Iron-Sulfur Acid Spring	MHRPHTIASLLLTAVLAAPLSVMAAPVPQEAGVQVRVYDRNHKDYHNWDDHENRAW
Ga0073928_102243124	3300006893	Iron-Sulfur Acid Spring	MHRANRYITSLFLTAALAAPAALMAIPAPQEDHNQNRVYDKEHKDYHNWDDNENKAWGQYLSDNHKSSHEY
Ga0073928_105682532	3300006893	Iron-Sulfur Acid Spring	MHRVNRYITSLFLTAALAAPVAMIAAPIPQEDHNQKRVYDKDHKDYHNWDDNENKAWGQYLSDNHKSSH
Ga0116223_107067592	3300009839	Peatlands Soil	MRFTHRYISSLILAAAIAAPVVIMAAPAPKDDSVSVRVYDRNHRDYHNWDDHEN
Ga0074044_102031662	3300010343	Bog Forest Soil	MHLAHRYVVSLFLTAAIAAPAAIMAVPVPQQASAQVRVYDKDHKDYHDWNQNENHAWGQYQTDNH
Ga0136449_1045597561	3300010379	Peatlands Soil	MNGKHLYVASLFLTAALVMPVAMMAAPAPQRASVQFRVYDSGHKDYHNWDDNEN
Ga0120132_10861871	3300013832	Permafrost	MHRANRYITSLFLTAALAAPVALMAIPAPQEDRNQNRVYDKEHKDYHNWNDNENKAWGQY
Ga0181535_106693403	3300014199	Bog	MYHAHRYISALFLAAALATPVAIVAAAEPQSVQIRVYDRDHKDYHNWDDNENRAYG
Ga0182018_101448142	3300014489	Palsa	MHRAHRYIASLFLIAALAAPLSVMAVPMPQEASAQVRVYDKGHKDYHNWDDNENRAW
Ga0182018_101961551	3300014489	Palsa	MHRSHHYIASLFLTAALAAPMPIMATPVPQEAGVQVRVYDKDHKDYHNWDGNENRAWNQYLTENHRDA
Ga0182018_102038631	3300014489	Palsa	MHRSHHYIASLFLTAALAAPMSIMATPVPQEAGVQVRVYDKDHKDYHNWDGNENRAWNQYLTENHRDA
Ga0181525_104851072	3300014654	Bog	MHRPHHYLASFFLTAALAAPISLLAAPGPQEANVQVRVYDRDHKDYHNWDDNENRAWGQFLVENHRDHHEYAKSNR
Ga0167662_10162513	3300015082	Glacier Forefield Soil	MHRAKIYIGALFLVGALGMPVAIKAVPVPQENREHRVYDREHKDYHNWDDR
Ga0187802_104414791	3300017822	Freshwater Sediment	MHLSHRYLAPLFLTAALAAPVAIMAVPVPQEAHDQNRVYDKDHKDYHNWDDNENRAWGK
Ga0187816_105583812	3300017995	Freshwater Sediment	MRFTNRYIRSLVLVAALAVPAAILANAMPQEASVQVRVYNRDHKDYH
Ga0187884_103732482	3300018009	Peatland	MHRPHLYLASLFMTAALAAPLSIMATPTPQEGVQVRVYDKGHKDYHNWDDNENRAW
Ga0187880_14435981	3300018016	Peatland	MHHLNRYVASLFLAAAIAGPMSIMAVPSPGGATVQVRVYDRNHRDYHNWDDRE
Ga0187863_107558252	3300018034	Peatland	MHPAHRYISTLFLAAALATPAAMMAAEPQAASVQVRVYDRDHKDYHNWDDK
Ga0187875_101350191	3300018035	Peatland	MHHTRRYVASLFLAAALAGPMSIMAVPRPEGGTVTVRVYDRNHK
Ga0187862_108383921	3300018040	Peatland	MHYAHRYVASLFLAAAFAGPMAIMAAPTPQGAAVQVRVYDRNHRDYHNWD
Ga0187871_105641732	3300018042	Peatland	MHYAHRYVASLFLAAAFAGPMAIMAAPTPQGAAVQVRVYDR
Ga0187890_100910873	3300018044	Peatland	MQRAHGYIASLLLAAALAAPVAIIAVPVPQEVQVRVYDKDHKDYHNW
Ga0182028_15218091	3300019788	Fen	MHRTHHYVASFFLAAALAGPMLIMAAPRPEEAKVQVRVYDRNHKDYHNWDDHENQTW
Ga0210407_105574481	3300020579	Soil	MHRTHRYIASLVLTAAIAAPVWLMAAPVPQEARVQVRVYDRQHKDYH
Ga0210407_113691642	3300020579	Soil	MHGSSHYIASLFLTAALAAPLSLMAAPRPQEASVQVRVYDKQHRDYHNWDDNEN
Ga0210407_114190961	3300020579	Soil	MHRPHHYIASFFLTAAFAAPLSIMAMPTPQEAGLQVRVYDRRHRDYHNWDDNENRAWNQYLTENHRD
Ga0210403_106653002	3300020580	Soil	MRNSNRFISSLFLAAALAAPVAMMAAPGPQAVGVQVRVYDRDHKDYHNWDDHERS
Ga0210403_113245592	3300020580	Soil	MHRAHCVIASLFLRAVLASPVSMMAAPMPQSDGVQVRVYDKSYKDYHDYDDNEKQVY
Ga0210395_103132582	3300020582	Soil	MRSTHLYIGSLFLAAALAAPVAMVAAPAPNDSGVQVRVYDRDHRDYHNWDDRENHAW
Ga0210401_101526282	3300020583	Soil	MYRAHSYIASLFLTAVLATPVAMVAVPVPQEAGVQVRVYDKGHKDYHNWDDNENCAWGQYLTENHRSSHEFAKANKKE
Ga0210401_103386393	3300020583	Soil	MHRAHRYVASLFLTAALAAPVSMMAAPLPQEAGVQVRVYDRDHKDYHNWDDH
Ga0210401_103689741	3300020583	Soil	MHHTHRYIAALFLTAALAAPVSMMAAPVPQEAGVQVRVYDSGHHDYHNWDDHERHAWGVYLS
Ga0210404_103219851	3300021088	Soil	MNGKHLYVASLFLTAALVMPVAMMAAPAPQRAKVQLRVYDSGHKDYHNWDDNENHAWGLYLTENNRKPH
Ga0210404_107882971	3300021088	Soil	MRCAHGYIASLLLTAALVAPVALMAAPVPQEASVHVRVYDRTHKDYHNWDDNENQAWGRYLNENHRNNHEYARSNRR
Ga0210406_101803982	3300021168	Soil	MVTALHGADIQSLEDYNMQLSSRYLASLFLTAALAAPVAIMAAPVPQEASVQVRVYDKNHNDYHQWNDNENRAWDRYNTENHHKSHEF
Ga0210405_104735041	3300021171	Soil	MRSTHLYIGSLFLAAALAAPVAMVAAPAPNDAGVQVRVYDRDHRDYHNWDDRENHAWG
Ga0210408_100296415	3300021178	Soil	MNGKHLYVASLFLTAALVMPVAMMAAPAPQRAKVQLRVYDSGHKDYHNWDDNENHAWGL
Ga0210408_111439941	3300021178	Soil	MHRTHKYIASLFLTAALVAPVAIIAAPAPQEANVQLRYYDRHHKDYHNWDENENRSWGQYLTQKHRNSH
Ga0210396_115631661	3300021180	Soil	MQTLHRYISGALLTAALAVPAALVAAPMPQEAKVQVRVYDSEHKDYHNWDDHENEAWVR
Ga0210396_116619731	3300021180	Soil	MHRPHHYLAALFLTAAVAAPVSMLATPAPQEAGVQVRVYDKNHKDYHNWDDNENRAWGAYLTENHRSPHEYA
Ga0210396_116838012	3300021180	Soil	MRSTHPYIGSLFLAAALAAPVAMVAAPAPNDAGVQVRVYDRDHRDYHNWDDRENH
Ga0210393_103248701	3300021401	Soil	MHRTHRYFASLFLTAALAAPLSMMAAPVPQEAGVQVRVYDSGHHDYHNWDDH
Ga0210397_102304213	3300021403	Soil	MHRAHRYIASIFLTAALAVPVSIMAAPVPQEGHDQNQVYDKEHKDYHNWDDNENR
Ga0210389_111884841	3300021404	Soil	MHRAHRYIASIFLTAALAVPVSIMAAPVPQEGHDQNQVYDKGHKDYHNWDDNENRAWGQYLTENHKKSHEFSKAN
Ga0210386_116742281	3300021406	Soil	MHRPHHYIASFFLTAAFAAPLSIMAMPTPQEAGLQVRVYDRRHRDYHNWDDNENRAWNQYLTEN
Ga0210383_115031212	3300021407	Soil	MHSPHRYIASLFLTAALVAPVVLMSAPVPQASVQFRVYDSRHKDYHNWDDNENRVWG
Ga0210394_106031501	3300021420	Soil	MHRSYRFVAALFLATAIAAPASMMAAPVPQDASVQVRVYDSGHKDYHNWDDR
Ga0210394_113563142	3300021420	Soil	MMNQTYRFVSSLFLAAAIAAPVSILAAPKAQDAAVQVRVYDDDNKDYHNWDDRENERWHEYLKENR
Ga0210384_101223403	3300021432	Soil	MRKIHRYVQSLVLASALVAPAIVFAGAAPQDASVQFRVYDRDHRDYHNWDDRED
Ga0210391_107032681	3300021433	Soil	MHRAHRYIASLFLTAALAAPVSMMAAPVPQEGVQVRVYDRDHKDYHNWDDH
Ga0210391_114144531	3300021433	Soil	MQRAHRYVASLFLTAALAAPVSMMAAPAPQAVQVRVYDRDHHDYHNWDDHERHA
Ga0210390_111905992	3300021474	Soil	MHRPHHYLASFFLTAALAAPLSIMAAPAPQDASVQVRVYDKNHKDYHNWD
Ga0210402_104726742	3300021478	Soil	MRSKYGSIASLLLTVALAVPVVVMAVPGPQEAGVQVRVYDKNHKDYHNWDDNENRAWGQ
Ga0210402_106699191	3300021478	Soil	MNGAYRYIFLLLLTAALMMPVAMMAAPPQSAGVQVRVYDSRHKDYHNWDDSENRQWGL
Ga0210402_119106922	3300021478	Soil	MMNQTYRFVSSLFLAAAIATPVSILAAPKAQDAAVQVRVYDDDNKDYHNW
Ga0210410_116359031	3300021479	Soil	MHRPHHYLASLFLTAAIAAPISMIAMPSPQEAGVQVRVYDKNHKDYHNWDDNENRAWGVYLTENHKNHHDY
Ga0210409_102635421	3300021559	Soil	MNGKHLYVASLFLTAALVMPVAMMAAPAPQRAKVQLRVYDSGHKDYHNWDDNENHAWGLPYGK
Ga0210409_106943431	3300021559	Soil	MHVSHRYLAPFFLAAALVAPVVIVAGPVPQDARVQVRVYDKDHKDYHDWNDNENRAWGQYQTENRQKSHEFSKANHKQQS
Ga0210409_116516191	3300021559	Soil	MHRPHHYIASFFLTAAFAAPLSIMAMPTPQEAGLQVRVYDRRHRDYHNWDDNENRAWN
Ga0212123_104792962	3300022557	Iron-Sulfur Acid Spring	MHRVNRYITSLFLTAALAAPVAMIAAPIPQEDHNQKRVYDKDHKDYHNWDDNENKAWGQYLSDNHKSSHEYA
Ga0224544_10030156	3300023250	Soil	MRHTHRYIGSLFLAAVLSAPVAIMAAPVPQDTSVQVRVYDRDHKDYHNWDDNENRQW
Ga0228598_10432692	3300024227	Rhizosphere	MHRAHGYIASLFLIAGLVAPVSMMAAPVPQEASVQVRVYDRDHKDYHNWDDNENRAWGRFLNENHRNSHEFAKSN
Ga0209171_105085771	3300025320	Iron-Sulfur Acid Spring	MHQVHRYFASLFLIAAIAAPTSIMAAPAPQRSGAHIRYYDKSHK
Ga0208714_10283691	3300025527	Arctic Peat Soil	MQRIHGYIASLFLTAALAAPVSTLAVPIPQEARDQKRVYDKDHKDYHNWDDKEDKAWGQ
Ga0207658_114828481	3300025986	Switchgrass Rhizosphere	MHRADHYIASLFLSDAIAAPGAIMAIPVPQQVGVQVRVYDRSHKDYHNWDEN
Ga0209890_101256701	3300026291	Soil	MHRAHRYIASLFLTAALAGPAVIMATPVPEDAHVQVRVYDKGHKDYHNW
Ga0209648_102121111	3300026551	Grasslands Soil	MHLSHRYVASLFLTAALAAPVAIMAAPAPQESRVQVRVYDKQHKDYHNWDDNENRAWGQYLTDNHRNPHEFSK
Ga0209529_10407662	3300027334	Forest Soil	MHRAHRYIASLFLTAALAAPVSMMAAPVPQQVRVYDRDHKDYHNWDDHERHAWGVFLTD
Ga0209733_11125571	3300027591	Forest Soil	MHRTHRYIASLFLTAALVAPVVIMAAPAPQEARVQLRIYDRQHKDYHNWDDNENRAWG
Ga0209422_11013171	3300027629	Forest Soil	MHISHRYLAPFFLAAALVAPVAIVAIPVPQEAKVQVRVYDKNHKDYHDWNDKENHAWGQY
Ga0209007_10195461	3300027652	Forest Soil	MHRPHHHFASFLLTAALAAPLSIMAMPTPQDASVQVRVYDKDHKDYHNWDDN
Ga0209009_11900741	3300027667	Forest Soil	MYRAHSYIASLFLTAVLATPVAMVAVPIPQEAGVQVRVYDKGHKDYHNWDDNENR
Ga0209118_12165301	3300027674	Forest Soil	MHRTHRYIASLFLTAAIAAPVWLMAAPVPQEASVQIRVYDKQHKDYHNWDDNENRAWGQYLNDNHRNSHEFSK
Ga0209655_101265642	3300027767	Bog Forest Soil	MHRTHRYVVALFLTAALAAPVSMMAAPVPQEAGVQVRVYDSGHHDYHNWDDHERHAWGVYLSD
Ga0209139_100660171	3300027795	Bog Forest Soil	MHRTHRYVAALFLTAVLAAPVSMMAAPVPQEGVRVRVYDSGHHDYHNWDDHERHAWGVNL
Ga0209580_101883061	3300027842	Surface Soil	MMNRAYRLASSLFLAAAIAAPVSMLAAPAAQDAAVQVRVYDRDHKDYHNWDDNENKR
Ga0209580_106614952	3300027842	Surface Soil	MHSAHRYIASLLLSAALAAPLSMMAAPGPQSANVQIRIYDKNHKDYHNW
Ga0209693_104276752	3300027855	Soil	MHRANRYITSLFLTVALAAPVAMMAIPVPQEDGHQNRVYDKEHKDYHNWDDNENKAWG
Ga0209693_104708061	3300027855	Soil	MHSIRGYIASLFLTAVLAAPVSIMAVPIPQEAHDQNRVYDKDHKDYHNWDDKENKAWGQW
Ga0209167_108290301	3300027867	Surface Soil	MHRSNRFAASLFLAAAIAAPVSIMAAPAPQEAGVQIRVYDRDHKDYHNWDDREDRAYRGF
Ga0209169_100020621	3300027879	Soil	MHRAHRYIASLFLTAALAAPVSMMAAPVPQEGVQVRVYDRDHKDYHNWDD
Ga0209380_102507621	3300027889	Soil	MHRAHRYIASLFLTAALAAPVSVMGAGIPQEAGVQVRVYDRDHKDYHNWDDNENRAWG
Ga0209624_104598583	3300027895	Forest Soil	MHRPHRYIASFLFTAALAAPLSIMAAPAPQEAGVQVRVYDKQHKDYHNWDDNENRAWNQYLTENHRDAHEYSK
Ga0209624_108666891	3300027895	Forest Soil	MQRPQHYIASLFITAALAAPVLVMALPIPQEAGVQVRVYDKRHKDYHNWDENENRAWGRYLTENHRDAHEYAKSNKREQ
Ga0209415_107216782	3300027905	Peatlands Soil	MHRAHSYIASLVLTAALAAPVAIMAVPVPQEVQVRVYDKDHKDYHNW
Ga0209006_114591582	3300027908	Forest Soil	MHRAHRYIVSLFITAALAAPVLTMAAPTPQKASVQIRVYDRDHKDYHN
Ga0265344_1008832	3300028011	Plant Litter	MRSKSGFISSLLLTAALAAPVAVMATRGPQEASVQVRVYDKNHKDY
Ga0265355_10238591	3300028036	Rhizosphere	MHRPHRYIASFLFTAALAAPLSSMATPTPQEAGVQVRVYDKQHKDYHN
Ga0209526_106844561	3300028047	Forest Soil	MNGKHLYIASLFLTAALVMPVAMMAAPAPQRAGVQVRVYDSGHKDYHN
Ga0137415_112334321	3300028536	Vadose Zone Soil	MHRTHRYIASLFLTAAIAAPVWLMAAPVPQEARVQVRVYDRNHKDYHNWDDNENRAWGQY
Ga0302182_100009231	3300030054	Palsa	MNRAYRYIASALLAGALVSPASIIAALPQDHDPNRVYDRDHKDYHNWDDHENQAWHHYLE
Ga0302179_100172481	3300030058	Palsa	MHLAHRYIASLFLTAALVAPVSILAAAAPQDATVQVRVYDRDHKDYHNWDDN
Ga0311372_130596911	3300030520	Palsa	MRTTQRVIASLFLTAILAAPVAIMAAPAAQDASVSVRVYDPGARQYHNWDDNENKAWGAYLV
Ga0311355_101551001	3300030580	Palsa	MRTTQRVIASLFLTAILAAPVAIMAAPAAQDASVSVRVYDPGARQYHNWDDNENKAWGAYLVQNHRKP
Ga0302310_101975622	3300030737	Palsa	MRHTHRYIGSLFLAAVLSAPVAIMAAPVPQDTSVQVRVYDRDHKDYHNWDDNENRQWGIF
Ga0302311_103090792	3300030739	Palsa	MRTTQRVIASLFLTAILAAPVAIMAAPAAQDASVSVRVYDPGARQYHNWDDNENKAWGAYLVQNHRKPHD
Ga0302314_107279881	3300030906	Palsa	MRHTHRYIGSLFLAAVLSAPVAIMAAPVPQDASVQVRVYDRDHKDYHNWDDNENRQWG
Ga0073994_100612363	3300030991	Soil	MHLSHRYIASLFLTAALAAPVAIMAAPAPQESRAQVRVYDKQHKDYHNWDDNENR
Ga0265773_10365742	3300031018	Soil	MRSKSGFISSLLLTAALAAPVAVLATRGPQEASVQVRVYDKNHKDYHNWDDNENRAWGQFLSDN
Ga0265760_102003661	3300031090	Soil	MRSKSGFISSLLLNAALVAPVAVLATRGPQEASVQVRVYDKNHKDYHNWDDNENR
Ga0265760_102185131	3300031090	Soil	MHRPHHYLAPLFLTAALAAPLSMMAAPAPQEASVQVRVYDRQHKDYHNWDDNENRAWNQ
Ga0265760_103080211	3300031090	Soil	MMHRTKRFAVSLFLAASIVAPASIMAAPSPQAAVSVRVYDSGHKD
Ga0170824_1125066722	3300031231	Forest Soil	MHLAHRFMSTLLLTAALAAPVAIIAAPAPQRVGVQLRIYDRHHKDYHDWDDRE
Ga0265316_103270053	3300031344	Rhizosphere	MYHARRYITSLFLAAALATPAAIMAMPKPQNASVQVRVYDRDHKDYHNWDDREDRAY
Ga0302326_114482271	3300031525	Palsa	MHRSHRFITSLFLAAVLTAPVSVMAAAAPQTASVQVRVYDKDHKDYHNWDD
Ga0310686_1094328901	3300031708	Soil	MHRAHRYIASLFLTAAIAAPVGIMAAATSQGVGVQVQVYDKGHK
Ga0310686_1136836771	3300031708	Soil	MRSKSGFISSLLLTAALAAPVAVMATRGPQEASVQVRVYDKNHKDYHNWDDNENRAWGQFLV
Ga0310686_1177912731	3300031708	Soil	MFRTHRFVASLILGAALLAPVSILAAANPQDVSVRVYDRNHKDYHNWDDNE
Ga0307478_106250262	3300031823	Hardwood Forest Soil	MHRTHRYIASLVLTAAIAAPVWLMAAPVPQEARVQIRVYDRQHKDYHNWDDNENRAWGQYLNDNHKNSH
Ga0307479_116792871	3300031962	Hardwood Forest Soil	MHHAHRYIASLFLTAALVAPVAILGAPAPQEASVQIRVYDRNHKDYHNWDDNENRAWGQYQTEHHKNSHE
Ga0311301_113074923	3300032160	Peatlands Soil	MHSAHRYIASLFLTAALVAPASIMAAPVPQGASVQVRVYDKEHKDYHNWDDNENRAWGQYLTENHKKS
Ga0311301_120412541	3300032160	Peatlands Soil	MHLAHRCIASLFLTAALAAPVSTMAAPAPQEVGVQVRVYDRDHKDYHNWDEREERAYRG
Ga0311301_129579062	3300032160	Peatlands Soil	MHRTHRYVASLFLTAALAAPVAIVAAPAPQDAGVQVRVYDRDHKDYHNWDDHENRAWGI
Ga0307470_110600601	3300032174	Hardwood Forest Soil	MHRSHHYIASLFLTAALAAPMSIMAAPLPQEASVQVRVYDRNHKDYHNWDGNENRAWNQYLTE
Ga0307471_1000993291	3300032180	Hardwood Forest Soil	MHRPHGYIASLLLTAALAAPVAIMAVPVPQEASVRVRVYDRNHKDYHNWDDNENRAWGHFLTENHRN
Ga0316212_10424912	3300033547	Roots	MRSKSGFISSLLLTAAFAAPVAVMATRGPQEASVQVRVYDKNHKDYHNWDDNENRAWG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060143

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences