Metagenome / Metatranscriptome Family F059983

Basic Information
Family ID	F059983
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	40 residues
Representative Sequence	TQNARLYLTETTRLFTQLWASLQSGEADGGVVRHMR
Number of Associated Samples	107
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.76 %
% of genes near scaffold ends (potentially truncated)	96.24 %
% of genes from short scaffolds (< 2000 bps)	59.40 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (71.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater (26.316 % of family members)
Environment Ontology (ENVO)	Unclassified (55.639 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.489 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.94% β-sheet: 0.00% Coil/Unstructured: 64.06%
Feature Viewer

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Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01645	Glu_synthase	9.02
PF09360	zf-CDGSH	5.26
PF08975	2H-phosphodiest	4.51
PF13610	DDE_Tnp_IS240	3.76
PF03466	LysR_substrate	3.76
PF02826	2-Hacid_dh_C	3.01
PF16925	TetR_C_13	3.01
PF11746	DUF3303	2.26
PF00589	Phage_integrase	2.26
PF02515	CoA_transf_3	2.26
PF13419	HAD_2	2.26
PF00005	ABC_tran	1.50
PF13343	SBP_bac_6	1.50
PF00171	Aldedh	1.50
PF04303	PrpF	1.50
PF07045	DUF1330	1.50
PF08521	2CSK_N	1.50
PF03480	DctP	1.50
PF00440	TetR_N	1.50
PF14311	DUF4379	0.75
PF12849	PBP_like_2	0.75
PF13640	2OG-FeII_Oxy_3	0.75
PF07943	PBP5_C	0.75
PF13738	Pyr_redox_3	0.75
PF04519	Bactofilin	0.75
PF02738	MoCoBD_1	0.75
PF07883	Cupin_2	0.75
PF08240	ADH_N	0.75
PF14026	DUF4242	0.75
PF11074	DUF2779	0.75
PF01047	MarR	0.75
PF13202	EF-hand_5	0.75
PF13378	MR_MLE_C	0.75
PF13193	AMP-binding_C	0.75
PF07693	KAP_NTPase	0.75
PF00126	HTH_1	0.75
PF13411	MerR_1	0.75
PF01263	Aldose_epim	0.75
PF05610	DUF779	0.75
PF07729	FCD	0.75
PF16912	Glu_dehyd_C	0.75
PF01144	CoA_trans	0.75
PF13564	DoxX_2	0.75
PF13561	adh_short_C2	0.75
PF00092	VWA	0.75
PF12680	SnoaL_2	0.75
PF00491	Arginase	0.75
PF04542	Sigma70_r2	0.75
PF13460	NAD_binding_10	0.75
PF12833	HTH_18	0.75
PF03601	Cons_hypoth698	0.75
PF00486	Trans_reg_C	0.75
PF13302	Acetyltransf_3	0.75
PF05199	GMC_oxred_C	0.75
PF00848	Ring_hydroxyl_A	0.75
PF04290	DctQ	0.75
PF00378	ECH_1	0.75
PF16113	ECH_2	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	9.02
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	9.02
COG5255	Uncharacterized conserved protein	Function unknown [S]	4.51
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.26
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.50
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.50
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.50
COG2828	2-Methylaconitate cis-trans-isomerase PrpF (2-methyl citrate pathway)	Energy production and conversion [C]	1.50
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.50
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.50
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.50
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.75
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.75
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.75
COG4928	Predicted P-loop ATPase, KAP-like	General function prediction only [R]	0.75
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.75
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.75
COG3564	Uncharacterized conserved protein, DUF779 family	Function unknown [S]	0.75
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.75
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.75
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.75
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.75
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.75
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.75
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.75
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.75
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.75
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.91 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	45.86 %
Unclassified	root	N/A	28.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.52 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	38.35 %
Unclassified	root	N/A	28.57 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	5.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.01 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	18.80 %
unclassified Rhodobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales	9.77 %
Oleiphilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae	4.51 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	3.76 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	2.26 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.75 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.75 %
Oceanospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Rhodobacterales bacterium HTCC2255	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	7.52 %
Oleiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	4.51 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	2.26 %
Rhodobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium	2.26 %
Nitratireductor	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor	2.26 %
Sulfitobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter	1.50 %
Roseicitreum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Roseicitreum	1.50 %
Ruegeria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria	0.75 %
unclassified Oceanospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → unclassified Oceanospirillaceae	0.75 %
Niveispirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Niveispirillum	0.75 %
Pelagibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium	0.75 %
Shimia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Shimia	0.75 %
Marinovum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum	0.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Rhodobacterales bacterium HTCC2255	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	7.52 %
Oleiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	4.51 %
Rhodobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium	2.26 %
Roseicitreum antarcticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Roseicitreum → Roseicitreum antarcticum	1.50 %
Rhodobacteraceae bacterium HTCC2150	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2150	1.50 %
Shimia thalassica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Shimia → Shimia thalassica	0.75 %
unclassified Marinovum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum	0.75 %
unclassified Nitratireductor	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → unclassified Nitratireductor	0.75 %
unclassified Ruegeria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria	0.75 %
Niveispirillum irakense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Niveispirillum → Niveispirillum irakense	0.75 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	0.75 %
Oceanospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → unclassified Oceanospirillaceae → Oceanospirillaceae bacterium	0.75 %
Nitratireductor soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor soli	0.75 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.75 %
unclassified Sulfitobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter	0.75 %
Pelagibacterium luteolum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium luteolum	0.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Rhodobacterales bacterium HTCC2255	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	7.52 %
Oleiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	4.51 %
Rhodobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium	2.26 %
Roseicitreum antarcticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Roseicitreum → Roseicitreum antarcticum	1.50 %
Rhodobacteraceae bacterium HTCC2150	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2150	1.50 %
Marinovum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	0.75 %
Sulfitobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	0.75 %
Nitratireductor sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → unclassified Nitratireductor → Nitratireductor sp.	0.75 %
Ruegeria sp. TrichCH4B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. TrichCH4B	0.75 %
Shimia thalassica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Shimia → Shimia thalassica	0.75 %
Niveispirillum irakense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Niveispirillum → Niveispirillum irakense	0.75 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	0.75 %
Oceanospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → unclassified Oceanospirillaceae → Oceanospirillaceae bacterium	0.75 %
Nitratireductor soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor soli	0.75 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	0.75 %
Pelagibacterium luteolum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium luteolum	0.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10115820	Not Available	1069	Open in IMG/M
3300000101\|DelMOSum2010_c10187107	Not Available	710	Open in IMG/M
3300000116\|DelMOSpr2010_c10000375	All Organisms → cellular organisms → Bacteria → Proteobacteria	29225	Open in IMG/M
3300001344\|JGI20152J14361_10059085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300001344\|JGI20152J14361_10110402	Not Available	534	Open in IMG/M
3300001347\|JGI20156J14371_10019182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium	3772	Open in IMG/M
3300001348\|JGI20154J14316_10161965	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300001349\|JGI20160J14292_10054746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	1760	Open in IMG/M
3300001351\|JGI20153J14318_10003713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2150	10091	Open in IMG/M
3300001351\|JGI20153J14318_10007056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HTCC2150	6678	Open in IMG/M
3300001351\|JGI20153J14318_10039971	Not Available	1869	Open in IMG/M
3300001352\|JGI20157J14317_10050181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1930	Open in IMG/M
3300002186\|JGI24539J26755_10063874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1096	Open in IMG/M
3300003247\|JGI26116J46587_1000968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	3821	Open in IMG/M
3300003265\|JGI26118J46590_1001993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	3361	Open in IMG/M
3300003271\|JGI26114J46594_1070005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	512	Open in IMG/M
3300003428\|JGI26111J50215_1003071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	2809	Open in IMG/M
3300004279\|Ga0066605_10029720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2623	Open in IMG/M
3300006419\|Ga0075496_1431175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → unclassified Nitratireductor → Nitratireductor sp.	1355	Open in IMG/M
3300007557\|Ga0102821_1206089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Roseicitreum → Roseicitreum antarcticum	502	Open in IMG/M
3300007647\|Ga0102855_1004942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	3732	Open in IMG/M
3300007667\|Ga0102910_1005714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2826	Open in IMG/M
3300007667\|Ga0102910_1027583	Not Available	1285	Open in IMG/M
3300007670\|Ga0102862_1015395	Not Available	1728	Open in IMG/M
3300007718\|Ga0102852_1000813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter	5300	Open in IMG/M
3300007862\|Ga0105737_1096028	Not Available	746	Open in IMG/M
3300007863\|Ga0105744_1121667	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300007981\|Ga0102904_1115047	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300008961\|Ga0102887_1125869	Not Available	801	Open in IMG/M
3300008995\|Ga0102888_1103238	Not Available	581	Open in IMG/M
3300009003\|Ga0102813_1016413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2818	Open in IMG/M
3300009003\|Ga0102813_1204685	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300009049\|Ga0102911_1178187	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300009074\|Ga0115549_1085108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1073	Open in IMG/M
3300009074\|Ga0115549_1190982	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300009076\|Ga0115550_1088846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1163	Open in IMG/M
3300009142\|Ga0102885_1071597	Not Available	830	Open in IMG/M
3300009423\|Ga0115548_1084493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1057	Open in IMG/M
3300009434\|Ga0115562_1006741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	7026	Open in IMG/M
3300009434\|Ga0115562_1123700	Not Available	993	Open in IMG/M
3300009435\|Ga0115546_1039958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1854	Open in IMG/M
3300009438\|Ga0115559_1042647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2007	Open in IMG/M
3300009442\|Ga0115563_1222296	Not Available	715	Open in IMG/M
3300009495\|Ga0115571_1125245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	1093	Open in IMG/M
3300009495\|Ga0115571_1352224	Not Available	581	Open in IMG/M
3300009495\|Ga0115571_1393355	Not Available	541	Open in IMG/M
3300009505\|Ga0115564_10009919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium luteolum	7001	Open in IMG/M
3300009505\|Ga0115564_10020141	All Organisms → cellular organisms → Bacteria	4491	Open in IMG/M
3300009507\|Ga0115572_10005730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. TrichCH4B	9475	Open in IMG/M
3300009507\|Ga0115572_10007793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7983	Open in IMG/M
3300009508\|Ga0115567_10174132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium	1411	Open in IMG/M
3300020169\|Ga0206127_1142107	Not Available	940	Open in IMG/M
3300020175\|Ga0206124_10018181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → unclassified Oceanospirillaceae → Oceanospirillaceae bacterium	3578	Open in IMG/M
3300020182\|Ga0206129_10029824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	3907	Open in IMG/M
3300020185\|Ga0206131_10060350	All Organisms → cellular organisms → Bacteria → Proteobacteria	2446	Open in IMG/M
3300020185\|Ga0206131_10163217	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300020185\|Ga0206131_10294340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	729	Open in IMG/M
3300020187\|Ga0206130_10091776	Not Available	1833	Open in IMG/M
3300020352\|Ga0211505_1116613	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300021085\|Ga0206677_10014217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	5188	Open in IMG/M
3300021365\|Ga0206123_10096522	Not Available	1418	Open in IMG/M
3300021371\|Ga0213863_10214877	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300021378\|Ga0213861_10233150	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300021389\|Ga0213868_10223187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	1116	Open in IMG/M
3300021389\|Ga0213868_10461644	Not Available	690	Open in IMG/M
3300021957\|Ga0222717_10000905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	24814	Open in IMG/M
3300021957\|Ga0222717_10421862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Niveispirillum → Niveispirillum irakense	733	Open in IMG/M
3300021959\|Ga0222716_10428360	Not Available	761	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10048226	Not Available	2052	Open in IMG/M
3300023704\|Ga0228684_1064905	Not Available	569	Open in IMG/M
3300024180\|Ga0228668_1062272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	716	Open in IMG/M
3300024192\|Ga0228637_1006101	Not Available	2597	Open in IMG/M
3300024221\|Ga0228666_1011249	Not Available	2419	Open in IMG/M
3300024231\|Ga0233399_1002989	All Organisms → cellular organisms → Bacteria → Proteobacteria	5951	Open in IMG/M
3300024237\|Ga0228653_1028630	All Organisms → cellular organisms → Bacteria → Proteobacteria	1308	Open in IMG/M
3300024247\|Ga0228675_1000851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	11163	Open in IMG/M
3300024248\|Ga0228676_1011544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2035	Open in IMG/M
3300024250\|Ga0228677_1000071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	17628	Open in IMG/M
3300024250\|Ga0228677_1006046	All Organisms → cellular organisms → Bacteria → Proteobacteria	2063	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10061833	All Organisms → cellular organisms → Bacteria → Proteobacteria	1844	Open in IMG/M
3300024292\|Ga0228630_1000909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	12240	Open in IMG/M
3300024297\|Ga0228658_1000217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	19434	Open in IMG/M
3300024314\|Ga0228657_1083658	Not Available	650	Open in IMG/M
3300024315\|Ga0228618_1011861	Not Available	1109	Open in IMG/M
3300024315\|Ga0228618_1086761	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300024319\|Ga0228670_1037821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	1142	Open in IMG/M
3300024320\|Ga0233398_1142769	Not Available	533	Open in IMG/M
3300024326\|Ga0228652_1000221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	35183	Open in IMG/M
3300024332\|Ga0228659_1000401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	10919	Open in IMG/M
3300024332\|Ga0228659_1003581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3813	Open in IMG/M
3300024343\|Ga0244777_10046679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	2769	Open in IMG/M
3300024359\|Ga0228628_1015771	All Organisms → cellular organisms → Bacteria → Proteobacteria	1921	Open in IMG/M
3300025456\|Ga0209776_1042910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	921	Open in IMG/M
3300025483\|Ga0209557_1043426	Not Available	1191	Open in IMG/M
3300025483\|Ga0209557_1050659	Not Available	1051	Open in IMG/M
3300025483\|Ga0209557_1119001	Not Available	517	Open in IMG/M
3300025577\|Ga0209304_1138696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Roseicitreum → Roseicitreum antarcticum	513	Open in IMG/M
3300025590\|Ga0209195_1038744	All Organisms → cellular organisms → Bacteria → Proteobacteria	1287	Open in IMG/M
3300025640\|Ga0209198_1093477	Not Available	954	Open in IMG/M
3300025696\|Ga0209532_1034787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2193	Open in IMG/M
3300025701\|Ga0209771_1005873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor soli	6350	Open in IMG/M
3300025704\|Ga0209602_1128429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium	846	Open in IMG/M
3300025704\|Ga0209602_1232962	Not Available	523	Open in IMG/M
3300025705\|Ga0209374_1021990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2836	Open in IMG/M
3300025876\|Ga0209223_10039926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp.	2964	Open in IMG/M
3300025880\|Ga0209534_10081464	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300025880\|Ga0209534_10116675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1481	Open in IMG/M
3300025886\|Ga0209632_10018990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Shimia → Shimia thalassica	5042	Open in IMG/M
3300025886\|Ga0209632_10043495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	2939	Open in IMG/M
3300026447\|Ga0247607_1038045	Not Available	831	Open in IMG/M
3300026479\|Ga0228622_1008062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	3500	Open in IMG/M
3300026511\|Ga0233395_1001524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	11169	Open in IMG/M
3300026511\|Ga0233395_1041593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1404	Open in IMG/M
3300026517\|Ga0228607_1095803	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300027077\|Ga0208941_1002690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	2892	Open in IMG/M
3300027170\|Ga0208963_1008501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1981	Open in IMG/M
3300027183\|Ga0208798_1024265	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300027192\|Ga0208673_1015657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	1321	Open in IMG/M
3300027367\|Ga0208801_1011095	Not Available	1541	Open in IMG/M
3300027406\|Ga0208965_1036921	Not Available	1151	Open in IMG/M
3300027413\|Ga0208950_1023451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	1759	Open in IMG/M
3300027506\|Ga0208973_1008787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	3470	Open in IMG/M
3300027582\|Ga0208971_1002137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	10881	Open in IMG/M
3300028008\|Ga0228674_1110052	Not Available	952	Open in IMG/M
3300028127\|Ga0233401_1015946	Not Available	1997	Open in IMG/M
3300028129\|Ga0228634_1102405	Not Available	627	Open in IMG/M
3300028287\|Ga0257126_1057296	Not Available	1570	Open in IMG/M
3300028297\|Ga0228617_1004477	All Organisms → cellular organisms → Bacteria → Proteobacteria	5872	Open in IMG/M
3300028419\|Ga0228625_1003677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	4632	Open in IMG/M
3300031519\|Ga0307488_10087420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2303	Open in IMG/M
3300031774\|Ga0315331_10008001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium HTCC2255	7878	Open in IMG/M
3300031774\|Ga0315331_10014067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	5933	Open in IMG/M
3300032088\|Ga0315321_10004335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	10923	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	29.32%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	27.07%
Pelagic	Environmental → Aquatic → Marine → Pelagic	22.56%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	13.53%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.51%
Inlet	Environmental → Aquatic → Marine → Inlet	2.26%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	29.32%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	22.56%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	14.29%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	13.53%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	12.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.51%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	26.32%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	16.54%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	12.78%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	11.28%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	11.28%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	6.02%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.01%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.26%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.26%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.26%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.50%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.50%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.75%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.75%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.75%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001351	Pelagic Microbial community sample from North Sea - COGITO 998_met_03	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300002186	Marine eukaryotic phytoplankton communities from the Norwegian Sea - 10m ARK-5M Metagenome	Environmental	Open in IMG/M
3300003247	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_03_M0_10	Environmental	Open in IMG/M
3300003265	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10	Environmental	Open in IMG/M
3300003271	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_18_M0_10	Environmental	Open in IMG/M
3300003428	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_04_M0_20	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300006419	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007667	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007718	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3	Environmental	Open in IMG/M
3300007862	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2um	Environmental	Open in IMG/M
3300007863	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2um	Environmental	Open in IMG/M
3300007981	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300008995	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3	Environmental	Open in IMG/M
3300009003	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009142	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020352	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300023704	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 35R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024180	Seawater microbial communities from Monterey Bay, California, United States - 82D	Environmental	Open in IMG/M
3300024192	Seawater microbial communities from Monterey Bay, California, United States - 47D	Environmental	Open in IMG/M
3300024221	Seawater microbial communities from Monterey Bay, California, United States - 80D	Environmental	Open in IMG/M
3300024231	Seawater microbial communities from Monterey Bay, California, United States - 43D	Environmental	Open in IMG/M
3300024237	Seawater microbial communities from Monterey Bay, California, United States - 65D	Environmental	Open in IMG/M
3300024247	Seawater microbial communities from Monterey Bay, California, United States - 36D_r	Environmental	Open in IMG/M
3300024248	Seawater microbial communities from Monterey Bay, California, United States - 48D_r	Environmental	Open in IMG/M
3300024250	Seawater microbial communities from Monterey Bay, California, United States - 58D_r	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024292	Seawater microbial communities from Monterey Bay, California, United States - 37D	Environmental	Open in IMG/M
3300024297	Seawater microbial communities from Monterey Bay, California, United States - 71D	Environmental	Open in IMG/M
3300024314	Seawater microbial communities from Monterey Bay, California, United States - 70D	Environmental	Open in IMG/M
3300024315	Seawater microbial communities from Monterey Bay, California, United States - 20D	Environmental	Open in IMG/M
3300024319	Seawater microbial communities from Monterey Bay, California, United States - 85D	Environmental	Open in IMG/M
3300024320	Seawater microbial communities from Monterey Bay, California, United States - 38D	Environmental	Open in IMG/M
3300024326	Seawater microbial communities from Monterey Bay, California, United States - 64D	Environmental	Open in IMG/M
3300024332	Seawater microbial communities from Monterey Bay, California, United States - 73D	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024359	Seawater microbial communities from Monterey Bay, California, United States - 34D	Environmental	Open in IMG/M
3300025456	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_10m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025483	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025577	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)	Environmental	Open in IMG/M
3300025590	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)	Environmental	Open in IMG/M
3300025640	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025701	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025705	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300026447	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 125R_r (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026479	Seawater microbial communities from Monterey Bay, California, United States - 26D	Environmental	Open in IMG/M
3300026511	Seawater microbial communities from Monterey Bay, California, United States - 27D	Environmental	Open in IMG/M
3300026517	Seawater microbial communities from Monterey Bay, California, United States - 8D	Environmental	Open in IMG/M
3300027077	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C27A4_35 (SPAdes)	Environmental	Open in IMG/M
3300027170	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C43A7_35 (SPAdes)	Environmental	Open in IMG/M
3300027183	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571 (SPAdes)	Environmental	Open in IMG/M
3300027192	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715 (SPAdes)	Environmental	Open in IMG/M
3300027367	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02 (SPAdes)	Environmental	Open in IMG/M
3300027406	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_07_M0_10 (SPAdes)	Environmental	Open in IMG/M
3300027413	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_54_BLW_10 (SPAdes)	Environmental	Open in IMG/M
3300027506	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10 (SPAdes)	Environmental	Open in IMG/M
3300027582	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_18_M0_10 (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028127	Seawater microbial communities from Monterey Bay, California, United States - 49D	Environmental	Open in IMG/M
3300028129	Seawater microbial communities from Monterey Bay, California, United States - 42D	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300028297	Seawater microbial communities from Monterey Bay, California, United States - 18D	Environmental	Open in IMG/M
3300028419	Seawater microbial communities from Monterey Bay, California, United States - 30D	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059983

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_101158203	3300000101	Marine	SPCITQNARLYLAETARLFTQLWASLQSGEADGGVD*
DelMOSum2010_101871071	3300000101	Marine	YLAETTRLFTQLWASLQSGEADGGVVRQTRARIISLI*
DelMOSpr2010_1000037528	3300000116	Marine	PCITQKARLYLTETTQLFTQLWTSLQSGEADGGVVRQSLTRLKLAP*
JGI20152J14361_100590851	3300001344	Pelagic Marine	TYITQNARLYLTETTRLFTQLRASLQSGEADGGVR*
JGI20152J14361_101104022	3300001344	Pelagic Marine	SPCIKQKARLYLPETTRLFTQLWASLQSGEADGGACRHKG*
JGI20156J14371_100191821	3300001347	Pelagic Marine	MHPQNARLYLIETTQLFTQLWASFQSGEADGGAVGQMRARIRL
JGI20154J14316_101619651	3300001348	Pelagic Marine	NARLYLPETTQLFTQLWASLQSGEADGGVVRHMR*
JGI20160J14292_100547461	3300001349	Pelagic Marine	ITQNARLYLAETTQLFTQLWASLQSGEADGGVARHTR*
JGI20153J14318_1000371312	3300001351	Pelagic Marine	YITQNARLYLTETTRLFTQLRASLQSGEADGGVD*
JGI20153J14318_100070568	3300001351	Pelagic Marine	CIKQKARLYLPETTRLFTQLWASLQSGEADGGVVRHAK*
JGI20153J14318_100399712	3300001351	Pelagic Marine	QGLSPCITQNARLYLPETTRLFTQLWASLQSGEADGGAVRQIRSRI*
JGI20157J14317_100501814	3300001352	Pelagic Marine	KARLHLPETTRLFTQLWASLQSGEADGGVVRHAK*
JGI24539J26755_100638742	3300002186	Marine	MHTQNXRXYLTETTXLFTQLWASLQSGEADGGAVRQIRSRI*
JGI26116J46587_10009686	3300003247	Marine	PCITQKARLYLPETTQLFTQLWASLQSGEADGGVVSHMXSRI*
JGI26118J46590_10019936	3300003265	Marine	MHQQNACLYLAETTWLFTQLWASLQSGEADGGALRQIRSRI*
JGI26114J46594_10700051	3300003271	Marine	RLYLTETTRLFTQLWASLQSGEADGGVLRHTTTYIRSLR*
JGI26111J50215_10030711	3300003428	Marine	QQNACLYLAETTWLFTQLWASLQSGEADGGALRQIRSRI*
Ga0066605_100297201	3300004279	Marine	PCITQNARLYLTETTQLFTQLWASLQSGEADGGVHRHKR*
Ga0075496_14311753	3300006419	Aqueous	ETTRLFTQLWASLQSGEADGGVVRHTTTYIRSLR*
Ga0102821_12060892	3300007557	Estuarine	PCITQNARLYLTETTRLFTQLWASLQSGEADGGAVRQIRSRI*
Ga0102855_10049424	3300007647	Estuarine	ARLYLPEIKRLFTQLWASLQSGEADGGVQRHKRYGIDHT*
Ga0102910_10057141	3300007667	Estuarine	GLSPCITQNARLYLTETTRLFTQLWASLQSGEADGGVG*
Ga0102910_10275831	3300007667	Estuarine	SPCITQNARLYLTETTRLFTQLWASLQSGEADGGVVRQSLTRIKVL*
Ga0102862_10153951	3300007670	Estuarine	NFGPCITQNARLYLTETTRLFTQLWASLQSGEADGGAVRQIRSRI*
Ga0102852_10008132	3300007718	Estuarine	MHQQNACLYLAETTWLFTQLWASLQSGEADGGVARHTRSNIK*
Ga0105737_10960282	3300007862	Estuary Water	GLSPCITQNARLYLTETTRLFTQLWASLQSGEADGGVVRHAR*
Ga0105744_11216671	3300007863	Estuary Water	IGQYKEPSRSTTQNARLYLTETTRLFTQLWASLQSGEADGGALRQIRSRI*
Ga0102904_11150472	3300007981	Estuarine	MGRCLSPCITQNARLYLPETTQLFTQLWASLQSGEAD
Ga0102887_11258692	3300008961	Estuarine	YLAETTRLFTQLWASLQSGEADGGVVRQSLTRIKVL*
Ga0102888_11032381	3300008995	Estuarine	QNARLYLPEITRLFTQLWASLQSGEADGGVQRHKRYGIDHT*
Ga0102813_10164135	3300009003	Estuarine	MHQQNACLYLAETTRLFTQLWASLQSGEADGGALRQIR
Ga0102813_12046851	3300009003	Estuarine	TQNARLYLTETTRLFTQLWASLQSGEADGGALRQIRSRI*
Ga0102911_11781871	3300009049	Estuarine	RLYLTETTRLFTQLWASLQSGEADGGAVRQIRSRI*
Ga0115549_10851081	3300009074	Pelagic Marine	SPCIKQKARLYLPETTRLFTQLWASLQSGEADGGVVRHAK*
Ga0115549_11909821	3300009074	Pelagic Marine	MGRCLSPCITQNARLYLPETTQLFTQLWASLQSGEADG
Ga0115550_10888461	3300009076	Pelagic Marine	QGLSPCITQNARLYLPETTRLFTQLWASLQSGEADGGVVRHAK*
Ga0102885_10715971	3300009142	Estuarine	QNARLYLTETTQLFTQLWASLQSGEADGGAHRHKR*
Ga0115548_10844931	3300009423	Pelagic Marine	CLSPCIKQKARLYLPETTRLFTQLWASLQSGEADGGVVRHAK*
Ga0115562_10067411	3300009434	Pelagic Marine	YQDFGTYITQNARLYLTETTRLFTQLRASLQSGEADGGVD*
Ga0115562_11237001	3300009434	Pelagic Marine	GLSASATQSARLYLAETTRLFTQLWASLQSGEADGGVARHTRSYII*
Ga0115546_10399581	3300009435	Pelagic Marine	PCITQNVRLYLAETTRLFTQLWASLQSGEADGGAFRQIKSRI*
Ga0115559_10426471	3300009438	Pelagic Marine	ARLYFTETMQLFTQLWASLQSGEADGGVVRQSLTHLKISR*
Ga0115563_12222961	3300009442	Pelagic Marine	RLYLAETTRLFTQLWASLQSGEADGGVARHTRSYII*
Ga0115571_11252451	3300009495	Pelagic Marine	QNARLYLPETTQLFTQLWASLQSGEADGGALRQIRSRI*
Ga0115571_13522241	3300009495	Pelagic Marine	QDFGTYITQNARLYLTETTRLFTQLRASLQSGEADGGAHRHKR*
Ga0115571_13933551	3300009495	Pelagic Marine	GLSPCITQNARLYLPETTRLFTQLWASLQSGEADGGVH*
Ga0115564_100099191	3300009505	Pelagic Marine	RLYLTETTRLFTQLWASLQSGEADGGVVRQSLTRIKVPR*
Ga0115564_100201411	3300009505	Pelagic Marine	QNARLYLAETTRLFTQLWASLQSGEADGGVARQMR*
Ga0115572_100057307	3300009507	Pelagic Marine	FRCYPCLSPCIKQKARLYLPETTRLFTQLWASLQSGEADGGVLRHAR*
Ga0115572_100077931	3300009507	Pelagic Marine	SSITQNARLYLIETTQLFTQLWASFQSGEADGGVR*
Ga0115567_101741323	3300009508	Pelagic Marine	SPCIKQKARLYLPETTRLFTQLWASLQSGEADGGVD*
Ga0206127_11421071	3300020169	Seawater	YQGLSPCITQNARLYLPETTRLFTQLWASLQSGEADGGVG
Ga0206124_100181811	3300020175	Seawater	GLSPCITQNARLYLPETTRLFTQLWASLQSGEADGGETGIL
Ga0206129_100298241	3300020182	Seawater	CITQNARLYLPETTQLFTQLWASLQSGEADGGVARHTR
Ga0206131_100603501	3300020185	Seawater	SPCIKQKARLYLPETTRLFTQLWASLQSGEADGGVR
Ga0206131_101632171	3300020185	Seawater	DFGTYITQNARLYLTETTRLFTQLRASLQSGEADGGVR
Ga0206131_102943402	3300020185	Seawater	QNACLYLAETTWLFTQLWASLQSGEADGGALRQIRSRI
Ga0206130_100917761	3300020187	Seawater	CITQNAHLYLAETTQLFTQLWASLQSGEADGGALRQIRSRI
Ga0211505_11166132	3300020352	Marine	TQNARLYLTITTRLFTQLWASLQSVEADGGVVRQTKSHIR
Ga0206677_100142176	3300021085	Seawater	MHQQNACLYLAETTWLFTQLWASLQSGEADGGALRQIRSRI
Ga0206123_100965221	3300021365	Seawater	PCITQNARLYLTETMRLFTQLWASLQSGEADGGVD
Ga0213863_102148771	3300021371	Seawater	KQKARLYLPETTRLFTQLWASLQSGEADGGVVRHTTTYIRSLR
Ga0213861_102331501	3300021378	Seawater	GLSPCITQNARLYLPETTQLFTQLWASLQSGEADGGVD
Ga0213868_102231872	3300021389	Seawater	LSPCITQNARLYLPETTQLFTQLWASLQSGEADGGALRQIRSRI
Ga0213868_104616442	3300021389	Seawater	QYARLYLTETTQLFTQLWSSLQSGEADGGVVRQTR
Ga0222717_1000090523	3300021957	Estuarine Water	NARMYLTETTRLFTQLWASLQSGEADGGVVRQSLTRLKLAP
Ga0222717_104218621	3300021957	Estuarine Water	YQGLSPCITQNARLYLTETTRLFTQLWASLQSGEADGGVD
Ga0222716_104283602	3300021959	Estuarine Water	QGLSPCITQNARLYLTETMRLFTQLWASLQSGEADGGAFRQIKSRI
(restricted) Ga0233426_100482261	3300022920	Seawater	TQNARLYLTETTRLFTQLWASLQSGEADGGVVRHMR
Ga0228684_10649052	3300023704	Seawater	LYLPEITQLFTQLWASLQSGEADGGVVRQNLTHLKVL
Ga0228668_10622721	3300024180	Seawater	MHQQNACLYLAETTWLFTQLWASLQSGEADGGVARHTRSNIK
Ga0228637_10061013	3300024192	Seawater	QNSRLYLTETTRLFTQLRASLQSGEADGGAVRRSLTHLKVL
Ga0228666_10112491	3300024221	Seawater	PCITKNERLYLAETTRLFTQLWASLQSGEADGGVGRPVR
Ga0233399_10029891	3300024231	Seawater	CITQNARLYLPEIKRLFTQLWASLQSGEADGGVARQTIVCIQLF
Ga0228653_10286301	3300024237	Seawater	LAETTRLFTQLWASLQSGEADGGVARQTIVCIQLF
Ga0228675_100085110	3300024247	Seawater	LYLPETTQLFTQLWASLQSGEADGGVVKHARTCIK
Ga0228676_10115443	3300024248	Seawater	CITQKARLYLPETTQLFTQLWASLQSGEADGGVVSHMRSRI
Ga0228677_10000711	3300024250	Seawater	YQGLSPCITQNARLYLPETTQLFTQLWASLQSGEADGGVVKHARTCIK
Ga0228677_10060461	3300024250	Seawater	PCITQNARLYLTETTQLFTQLWASLQSGEADGGVARQTIVCIQLF
(restricted) Ga0233438_100618331	3300024255	Seawater	LSPCITQNARLYLTETTRLFTQLWASLQSGEADGGVLRHAR
Ga0228630_10009091	3300024292	Seawater	TQNARLYLTETMRLFTQLWASLQSGEADGGAFRQIKSRI
Ga0228658_10002171	3300024297	Seawater	PCITQNARLYLPEIKRLFTQLWASLQSGEADGGAFRQIKSRI
Ga0228657_10836582	3300024314	Seawater	RPASATQSARLYLPEIKRLFTQLWASLQSGEADGGVD
Ga0228618_10118611	3300024315	Seawater	FSLSPCITQNARLYLPEITQLFTQLWASLQSGEADGGVVRQNLTHLKVL
Ga0228618_10867611	3300024315	Seawater	PCITQNARLYLHEITRLFTQLWASLQSGEADGGVARQTIVCIQLF
Ga0228670_10378212	3300024319	Seawater	ARLYLPETTRLFTQLWASLQSGEADGGVVSHMRSRI
Ga0233398_11427691	3300024320	Seawater	QGLSPCITQNARLYLPETTQLFTQLWASLQSGEADGGVVRHTTIHII
Ga0228652_10002211	3300024326	Seawater	NARLYLAETTRLFTQLWASLQSGEADGGVVKHARTCIK
Ga0228659_10004011	3300024332	Seawater	QNARLYLPETTQLFTQLWASLQSGEADGGVVKHARTCIK
Ga0228659_10035814	3300024332	Seawater	QNARLYLPETTRLFTQLRASLQSGEADGGAVRRSLTHLKVL
Ga0244777_100466792	3300024343	Estuarine	MGRCLSPCITQNARLYLTETTQLFTQLWASLQSGEADGGVLRHAR
Ga0228628_10157713	3300024359	Seawater	TQNARLYLPEITRLFTQLWASLQSGEADGGVARQTIVCIQLF
Ga0209776_10429102	3300025456	Marine	NFGPCITQNARLYLTETTRLFTQLWASLQSGEADGGAVRQIRSRI
Ga0209557_10434261	3300025483	Marine	PCITQNARLYLAETTRLFTQLWASLQSGEADGGVLRHAR
Ga0209557_10506591	3300025483	Marine	PCITQKARLYLPETTRLFTQLWASLQSGEADGGVARQTIVCIQLF
Ga0209557_11190011	3300025483	Marine	YQGHSPCITQNARLYLTETTRLFTQLWASLQSGEADGGVA
Ga0209304_11386961	3300025577	Pelagic Marine	QNASLYLAETTRLFTQLWASLQSGEADGGAVRQIRSRI
Ga0209195_10387441	3300025590	Pelagic Marine	SPCITQNARLYLPETTRLFTQLWASLQSGEADGGVR
Ga0209198_10934772	3300025640	Pelagic Marine	GLSPCITQNARLYLPETTQLFTQLWASLQSGEADGGVR
Ga0209532_10347871	3300025696	Pelagic Marine	ITQNARLYLAETTRLFTQLWASLQSGEADGGVARHTR
Ga0209771_10058731	3300025701	Marine	PCITQNARLYLTETTRLFTQLWASLQSGEADGGVLRHTTT
Ga0209602_11284293	3300025704	Pelagic Marine	PCITQNARLYLPETTQLFTQLWASLQSGEADGGVD
Ga0209602_12329621	3300025704	Pelagic Marine	CITQNARLYLTEPMPLYTQLWASLQSGEADGGVGSLLRTSL
Ga0209374_10219903	3300025705	Marine	CITQNARLYLTETTQLFTQLWASLQSGEADGGVHRHKR
Ga0209223_100399261	3300025876	Pelagic Marine	QNARLYLPETTRLFTQLWASLQSGEADGGSTGTRRL
Ga0209534_100814643	3300025880	Pelagic Marine	PCITQNARLYLTETTRLFTQLWASLQSGEADGGVVRQSLTRIKVPR
Ga0209534_101166754	3300025880	Pelagic Marine	PCIKQKARLYLPETTRLFTQLWASLQSGEADGGVVRHAK
Ga0209632_100189906	3300025886	Pelagic Marine	SNQGLSPCITQNARLYLTETMRLFMQLWASLQSGQADGGVD
Ga0209632_100434957	3300025886	Pelagic Marine	CITQNARLYLAETTQLFTQLWASLQSGEADGGVARHTR
Ga0247607_10380451	3300026447	Seawater	PCITQNARLYLPEITQLFTQLWASLQSGEADGGVVRQNLTHLKVL
Ga0228622_10080621	3300026479	Seawater	IRRPASATQSARLYPPEITRLFTQLWASLQSGEADGGVD
Ga0233395_100152410	3300026511	Seawater	ARLYLPETTQLFTQLWASLQSGEADGGVVKHARTCIK
Ga0233395_10415931	3300026511	Seawater	PCITQNARMYLTETTRLFTQLWASLQSGEADGGETGIL
Ga0228607_10958031	3300026517	Seawater	PCITQNARLYLTETMRLFTQLWASLQSGEADGGVARQTIVCIQLF
Ga0208941_10026905	3300027077	Marine	QQNACLYLAETTWLFTQLWASLQSGEADGGALRQIRSRI
Ga0208963_10085014	3300027170	Marine	MHQQNACLYLAETTWLFTQLWASLQSGEADGGALRQIRSR
Ga0208798_10242652	3300027183	Estuarine	YKEPSRSTTQNARLYLTETTRLFTQLWASLQSGEADGGALRQIRSRI
Ga0208673_10156571	3300027192	Estuarine	QNARLYLTETTRLFTQLWASLQSGEADGGAVRQIRSRI
Ga0208801_10110952	3300027367	Estuarine	CLYLAETTWLFTQLWASLQSGEADGGALRQIRSRI
Ga0208965_10369211	3300027406	Marine	PCITQNARLYLTETTQLFTQLWASLQSGEADGGVD
Ga0208950_10234513	3300027413	Marine	MGRCLSPCITQNARLYLPETTQLFTQLWASLQSGEADGI
Ga0208973_10087871	3300027506	Marine	LYLTETTQLFTQLWASLQSGEADGGVVKHARTCIK
Ga0208971_100213710	3300027582	Marine	RLYLPEIKRLFTQLWASLQSGEADGGVVKHARTCIK
Ga0228674_11100522	3300028008	Seawater	LSPCITQNARLYLPEITRLFTQLWASLQSGEADGGVARQTIVCIQLF
Ga0233401_10159463	3300028127	Seawater	TQNVRLYLAETTRLFTQLWANLQSGEADGGVGRPVR
Ga0228634_11024052	3300028129	Seawater	ITQNARLYLTETTRLFTQLWASLQSGEADGGVIRQTNYTI
Ga0257126_10572961	3300028287	Marine	QYARLYLTETTQLFTQLWASLQSGEADGGVVRHMR
Ga0228617_10044771	3300028297	Seawater	ITQNARLYLTETMRLFTQLWASLQSGEADGGVARQTIVCIQLF
Ga0228625_10036771	3300028419	Seawater	LSPCITQNARLYLTETTQLFTQLWASLQSGEADGGVARQTIVCIQLF
Ga0307488_100874203	3300031519	Sackhole Brine	QDLSPCITQNARMYLTETTRLFTQLWASLQSGEADGGVD
Ga0315331_100080017	3300031774	Seawater	PCITQNARLYLPETTRLFTQLWASLQSGEADGGVIKHTR
Ga0315331_100140676	3300031774	Seawater	LDLTETTRLFTQLWASLQSGEADGGVARQTIVCIQLF
Ga0315321_1000433510	3300032088	Seawater	TQNARLYLPETTQLFTQLWASLQSGEADGGVVKHARTCIK

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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