NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F059607

Metagenome Family F059607

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F059607
Family Type Metagenome
Number of Sequences 133
Average Sequence Length 71 residues
Representative Sequence VVKSFVIAQGNEERLELKVVAQLKGKELEDEGFAFGLWLLENASSPFLKGLAEALDEAEIRKKVGLGY
Number of Associated Samples 52
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 76.69 %
% of genes near scaffold ends (potentially truncated) 18.05 %
% of genes from short scaffolds (< 2000 bps) 65.41 %
Associated GOLD sequencing projects 44
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (93.233 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface
(41.353 % of family members)
Environment Ontology (ENVO) Unclassified
(41.353 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(43.609 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.42%    β-sheet: 17.71%    Coil/Unstructured: 46.88%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF00215OMPdecase 30.83
PF06107DUF951 27.82
PF00817IMS 5.26
PF11799IMS_C 3.76
PF11798IMS_HHH 3.01
PF08245Mur_ligase_M 3.01
PF02517Rce1-like 1.50
PF02580Tyr_Deacylase 1.50
PF01649Ribosomal_S20p 1.50
PF02699YajC 1.50
PF01891CbiM 1.50
PF00924MS_channel 0.75
PF01865PhoU_div 0.75
PF07883Cupin_2 0.75
PF14602Hexapep_2 0.75
PF13424TPR_12 0.75
PF09723Zn-ribbon_8 0.75
PF07969Amidohydro_3 0.75
PF00596Aldolase_II 0.75
PF13500AAA_26 0.75
PF09721Exosortase_EpsH 0.75
PF01729QRPTase_C 0.75
PF02426MIase 0.75
PF13408Zn_ribbon_recom 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 133 Family Scaffolds
COG4481Uncharacterized conserved protein, DUF951 familyFunction unknown [S] 27.82
COG0389Nucleotidyltransferase/DNA polymerase DinP involved in DNA repairReplication, recombination and repair [L] 5.26
COG0268Ribosomal protein S20Translation, ribosomal structure and biogenesis [J] 1.50
COG0310ABC-type Co2+ transport system, permease componentInorganic ion transport and metabolism [P] 1.50
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 1.50
COG1490D-aminoacyl-tRNA deacylaseTranslation, ribosomal structure and biogenesis [J] 1.50
COG1862Protein translocase subunit YajCIntracellular trafficking, secretion, and vesicular transport [U] 1.50
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 1.50
COG0157Nicotinate-nucleotide pyrophosphorylaseCoenzyme transport and metabolism [H] 0.75
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 0.75
COG1392Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 familyInorganic ion transport and metabolism [P] 0.75
COG1488Nicotinic acid phosphoribosyltransferaseCoenzyme transport and metabolism [H] 0.75
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 0.75
COG4829Muconolactone delta-isomeraseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.75

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.98 %
UnclassifiedrootN/A6.02 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001782|WOR52_10027196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi5941Open in IMG/M
3300009034|Ga0115863_1013642All Organisms → cellular organisms → Bacteria11389Open in IMG/M
3300009034|Ga0115863_1127260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas → Dehalogenimonas lykanthroporepellens3140Open in IMG/M
3300009034|Ga0115863_1160688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2741Open in IMG/M
3300009034|Ga0115863_1244276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2138Open in IMG/M
3300009034|Ga0115863_1456079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium1471Open in IMG/M
3300009034|Ga0115863_1573778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1280Open in IMG/M
3300009039|Ga0105152_10110765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1117Open in IMG/M
3300009039|Ga0105152_10249625Not Available734Open in IMG/M
3300009105|Ga0117905_1000097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia153885Open in IMG/M
3300009127|Ga0118724_1002836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi24350Open in IMG/M
3300009127|Ga0118724_1011753All Organisms → cellular organisms → Bacteria9803Open in IMG/M
3300009127|Ga0118724_1015762All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia7799Open in IMG/M
3300009150|Ga0114921_10054401All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2517Open in IMG/M
3300009150|Ga0114921_10109358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia1848Open in IMG/M
3300009150|Ga0114921_10140892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1645Open in IMG/M
3300009150|Ga0114921_10215809All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300009150|Ga0114921_10225249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1318Open in IMG/M
3300009150|Ga0114921_10465605All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300009150|Ga0114921_10471356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi915Open in IMG/M
3300009150|Ga0114921_10476688All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300009150|Ga0114921_10612690Not Available801Open in IMG/M
3300009150|Ga0114921_10782744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi707Open in IMG/M
3300009150|Ga0114921_10791109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium703Open in IMG/M
3300009150|Ga0114921_11072295Not Available601Open in IMG/M
3300009150|Ga0114921_11129997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia585Open in IMG/M
3300009150|Ga0114921_11497218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi505Open in IMG/M
3300009488|Ga0114925_10430130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium916Open in IMG/M
3300009488|Ga0114925_10546649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium815Open in IMG/M
3300009488|Ga0114925_10896940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium641Open in IMG/M
3300009488|Ga0114925_10955368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium622Open in IMG/M
3300009488|Ga0114925_11201775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium557Open in IMG/M
3300009488|Ga0114925_11436080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium511Open in IMG/M
3300009499|Ga0114930_10007886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi8332Open in IMG/M
3300009499|Ga0114930_10142861All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium1275Open in IMG/M
3300009499|Ga0114930_10172035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia1125Open in IMG/M
3300009499|Ga0114930_10397250All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300009528|Ga0114920_10047920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2575Open in IMG/M
3300009528|Ga0114920_10146911All Organisms → cellular organisms → Bacteria1542Open in IMG/M
3300009528|Ga0114920_10244793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1201Open in IMG/M
3300009528|Ga0114920_10291575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1099Open in IMG/M
3300009528|Ga0114920_10454177All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300009528|Ga0114920_10659404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium715Open in IMG/M
3300009528|Ga0114920_10690934All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi698Open in IMG/M
3300009528|Ga0114920_11043748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi560Open in IMG/M
3300009528|Ga0114920_11131721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia536Open in IMG/M
3300010302|Ga0116202_10005529All Organisms → cellular organisms → Bacteria7502Open in IMG/M
3300010302|Ga0116202_10028681All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2996Open in IMG/M
3300010302|Ga0116202_10106940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1366Open in IMG/M
3300010319|Ga0136653_10217270All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300010324|Ga0129297_10013315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas4051Open in IMG/M
3300010324|Ga0129297_10514372All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300010328|Ga0129298_10005124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi5831Open in IMG/M
3300010328|Ga0129298_10222151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium880Open in IMG/M
3300010328|Ga0129298_10230888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi861Open in IMG/M
3300010413|Ga0136851_10863607All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300011118|Ga0114922_11411712Not Available560Open in IMG/M
3300012931|Ga0153915_12298342All Organisms → cellular organisms → Bacteria631Open in IMG/M
(restricted) 3300013127|Ga0172365_10070860All Organisms → cellular organisms → Bacteria2264Open in IMG/M
(restricted) 3300013127|Ga0172365_10097916All Organisms → cellular organisms → Bacteria1874Open in IMG/M
(restricted) 3300013128|Ga0172366_10208410Not Available1249Open in IMG/M
(restricted) 3300013128|Ga0172366_10323604All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium953Open in IMG/M
(restricted) 3300013129|Ga0172364_10034925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi3717Open in IMG/M
(restricted) 3300013129|Ga0172364_10078680All Organisms → cellular organisms → Bacteria2321Open in IMG/M
(restricted) 3300013130|Ga0172363_10159611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium1549Open in IMG/M
3300014903|Ga0164321_10126369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1099Open in IMG/M
3300014903|Ga0164321_10259699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium813Open in IMG/M
3300015370|Ga0180009_10015059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas6734Open in IMG/M
3300017963|Ga0180437_10009403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia12115Open in IMG/M
3300017963|Ga0180437_10763869All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium698Open in IMG/M
3300021603|Ga0226659_10265020All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300022221|Ga0224506_10036122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia2547Open in IMG/M
3300022221|Ga0224506_10403722Not Available602Open in IMG/M
3300022221|Ga0224506_10422220Not Available586Open in IMG/M
3300022223|Ga0224501_10557578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi541Open in IMG/M
3300022551|Ga0212089_10033955All Organisms → cellular organisms → Bacteria3124Open in IMG/M
3300022551|Ga0212089_10143704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia1225Open in IMG/M
3300022551|Ga0212089_10346917Not Available685Open in IMG/M
3300022556|Ga0212121_10008459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi10346Open in IMG/M
3300022556|Ga0212121_10062284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi3009Open in IMG/M
3300022556|Ga0212121_10220480All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300024263|Ga0209978_10043886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi2248Open in IMG/M
3300024263|Ga0209978_10061587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia1903Open in IMG/M
3300024263|Ga0209978_10191580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1040Open in IMG/M
3300024263|Ga0209978_10240833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi912Open in IMG/M
3300024263|Ga0209978_10285597All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300024263|Ga0209978_10396639All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300024263|Ga0209978_10420224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia650Open in IMG/M
3300024353|Ga0209979_1007484All Organisms → cellular organisms → Bacteria7973Open in IMG/M
3300024353|Ga0209979_1237334All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300024353|Ga0209979_1270156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia557Open in IMG/M
3300024429|Ga0209991_10000796All Organisms → cellular organisms → Bacteria14111Open in IMG/M
3300024429|Ga0209991_10007592All Organisms → cellular organisms → Archaea → Euryarchaeota → Archaeoglobi → Archaeoglobales → Archaeoglobaceae → Archaeoglobus5135Open in IMG/M
3300024429|Ga0209991_10015665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia3654Open in IMG/M
3300024429|Ga0209991_10028620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2720Open in IMG/M
3300024429|Ga0209991_10052774All Organisms → cellular organisms → Bacteria2011Open in IMG/M
3300024429|Ga0209991_10192088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia1008Open in IMG/M
3300024429|Ga0209991_10239741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi884Open in IMG/M
3300024429|Ga0209991_10338995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium714Open in IMG/M
3300024429|Ga0209991_10348518All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300024432|Ga0209977_10136087All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Candidatus Phycosocius → Candidatus Phycosocius bacilliformis1205Open in IMG/M
3300024432|Ga0209977_10546937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia535Open in IMG/M
3300025136|Ga0209610_1088108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1058Open in IMG/M
3300025143|Ga0209314_10001544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia10054Open in IMG/M
3300025843|Ga0209182_10102451All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300027888|Ga0209635_10454283All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300027893|Ga0209636_10186861All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1916Open in IMG/M
3300027893|Ga0209636_10388045All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300027901|Ga0209427_10818570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium657Open in IMG/M
3300031565|Ga0307379_10843007All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300031772|Ga0315288_10016393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia9222Open in IMG/M
3300031772|Ga0315288_10971884All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300031862|Ga0315280_10012331All Organisms → cellular organisms → Bacteria10351Open in IMG/M
3300031862|Ga0315280_10056366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas3265Open in IMG/M
3300031862|Ga0315280_10071665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2698Open in IMG/M
3300031862|Ga0315280_10114779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1827Open in IMG/M
3300031862|Ga0315280_10191451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1182Open in IMG/M
(restricted) 3300031876|Ga0315310_10187387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi938Open in IMG/M
(restricted) 3300031876|Ga0315310_10381120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium574Open in IMG/M
(restricted) 3300031877|Ga0315314_1007826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia7277Open in IMG/M
3300031885|Ga0315285_10132004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas2110Open in IMG/M
(restricted) 3300031898|Ga0315312_1047111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas1652Open in IMG/M
3300031952|Ga0315294_11090285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium658Open in IMG/M
3300031999|Ga0315274_10155396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia2897Open in IMG/M
3300032020|Ga0315296_10010008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia7224Open in IMG/M
3300032020|Ga0315296_10037657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3345Open in IMG/M
3300032020|Ga0315296_10611004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium558Open in IMG/M
3300032046|Ga0315289_10053341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia5031Open in IMG/M
3300032046|Ga0315289_11054998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi674Open in IMG/M
3300032069|Ga0315282_10028803All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalococcoidales → Dehalococcoidaceae → Dehalococcoides → Dehalococcoides mccartyi7151Open in IMG/M
3300032069|Ga0315282_10054470All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → Dehalogenimonas4265Open in IMG/M
3300032070|Ga0315279_10125583All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium2140Open in IMG/M
3300033991|Ga0334965_0118574All Organisms → cellular organisms → Bacteria1146Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface41.35%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment22.56%
Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment9.02%
Anoxic Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water6.02%
Sediment, IntertidalEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal4.51%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment3.01%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine3.01%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment3.01%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment1.50%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment1.50%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.75%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.75%
Marine SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment0.75%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment0.75%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.75%
Granular SludgeEngineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge0.75%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001782Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_deep_samplesEnvironmentalOpen in IMG/M
3300009034Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, KoreaEnvironmentalOpen in IMG/M
3300009039Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cmEnvironmentalOpen in IMG/M
3300009105Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 900m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300009127Combined Assembly of Gp0137036, Gp0137038EnvironmentalOpen in IMG/M
3300009150Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaGEnvironmentalOpen in IMG/M
3300009488Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaGEnvironmentalOpen in IMG/M
3300009499Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaGEnvironmentalOpen in IMG/M
3300009528Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaGEnvironmentalOpen in IMG/M
3300010302Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 325m metaGEnvironmentalOpen in IMG/M
3300010319Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaGEnvironmentalOpen in IMG/M
3300010324Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaGEnvironmentalOpen in IMG/M
3300010328Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaGEnvironmentalOpen in IMG/M
3300010413Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9EnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300013127 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cmEnvironmentalOpen in IMG/M
3300013128 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cmEnvironmentalOpen in IMG/M
3300013129 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cmEnvironmentalOpen in IMG/M
3300013130 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2EnvironmentalOpen in IMG/M
3300014903Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay12, Core 4567-28, 21-24 cmEnvironmentalOpen in IMG/M
3300015370Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaGEnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300021603Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules spadesEngineeredOpen in IMG/M
3300022221Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_8_1EnvironmentalOpen in IMG/M
3300022223Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_8_1EnvironmentalOpen in IMG/M
3300022551Boni_combined assemblyEnvironmentalOpen in IMG/M
3300022556Kivu_combined assemblyEnvironmentalOpen in IMG/M
3300024263Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024353Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024429Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024432Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025136Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025143Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025843Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm (SPAdes)EnvironmentalOpen in IMG/M
3300027888Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)EnvironmentalOpen in IMG/M
3300027893Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)EnvironmentalOpen in IMG/M
3300027901Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031862Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40EnvironmentalOpen in IMG/M
3300031876 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5EnvironmentalOpen in IMG/M
3300031877 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9EnvironmentalOpen in IMG/M
3300031885Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36EnvironmentalOpen in IMG/M
3300031898 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP7EnvironmentalOpen in IMG/M
3300031952Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032020Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18EnvironmentalOpen in IMG/M
3300032046Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40EnvironmentalOpen in IMG/M
3300032069Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20EnvironmentalOpen in IMG/M
3300032070Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20EnvironmentalOpen in IMG/M
3300033991Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bactEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
WOR52_1002719683300001782Marine SedimentMVRSFVIARGNEEMLELKVVTQLKGKALKEEGLAFGLWLLENASTPFLRGLAEALDEAEVRKKVGLGY*
Ga0115863_1013642143300009034Sediment, IntertidalMWLPQEKALLEQQGMELESLERGMSSVKSFVIAKGDEERVELKVVTRLKGRKLEDEGLAFGFWLLENASSPFLKGLAEALDEAEIRKKVGLGY*
Ga0115863_112726033300009034Sediment, IntertidalLNLLDEEGGTTVKSFVIAKGKEDRVELKAVAQLKGKVLEDEGFAFGLWLLENASTPFLRGLARVMDEAEIRKKVGLGY*
Ga0115863_116068823300009034Sediment, IntertidalVVKSFVIAQGNEERLELKVVAQLKGKELEDEGFTFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY*
Ga0115863_124427633300009034Sediment, IntertidalMSTVTSFVIAEGNEERLELKVVTQLKGKELEDEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0115863_145607923300009034Sediment, IntertidalLNLLDEEGGATVKSFVIAKGKEDRVELKAVAQLKGKVLEDEGFAFGIWLLENASTPFLRGLARVMDEAEIRKKVGLGY*
Ga0115863_157377833300009034Sediment, IntertidalMSMVRSFVIARGNEETLELKVATQLKGKRLEEEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0105152_1011076523300009039Lake SedimentMRSFVIAQGNEEKVELTVVTQLKGRELEEEGNAFGLWLLENASTPFLRGLAEALDEAEIRKKVGLGY*
Ga0105152_1024962523300009039Lake SedimentMKSFVIARGNEEKIELKVSPQPEKDLEAEGHNFCLWLLENASSPFLKGLAETLDEAEIRKKVGLGY*
Ga0117905_1000097923300009105MarineVRVISNLKSFVIARGNEEKVELKVASELGGKELEDEGFAFTLWLLENASIPFLRGLAEALDEAEIRKKAGLGY*
Ga0118724_1002836153300009127MarineMSTVKSFIIAKGKKEKLELEVVTQLRGKELEDEGFAFGLWLLENASSLFLRGLAEALDEAEIRKKVGLGY*
Ga0118724_1011753113300009127MarineMSSVKSFVIAQGEKEGVALKVVSQCKRRELVEEGKTFGFWLLENASSPFLRGLAQALDEAEIRKKVGLGY*
Ga0118724_101576243300009127MarineMSTVKSFVIAKGKNERLELKVVTQLKGKELEDEGFAFGCWLLENASSPFLRGLAEAMDEAEIRKKVGLGY*
Ga0114921_1005440133300009150Deep SubsurfaceMVRSFVIARGNEERLELKVVTQLKGKALKDEGLAFGFWLLENASTPFLRGLAEALDEAEIRKKVGLGY*
Ga0114921_1010935823300009150Deep SubsurfaceLKGVRVLNNLKSFVIARGNEERLELRVVTQLKGKGLEDEGFAFALWLLENASTPFLRGLAEALDEAEIRKKAGLGY*
Ga0114921_1014089223300009150Deep SubsurfaceMSWGTELEFQTERKMSTVKSFIIAKGNKESLELKVVTQLKGKELEGEGFTFGLWLLENGSSLFLRGLAEALDEAEIRKKVGLGY*
Ga0114921_1021580943300009150Deep SubsurfaceNVWTGGLSVVKGFVIAKGNKERLELKVVTQLKGKELEREGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0114921_1022524933300009150Deep SubsurfaceMSQERRNRILDWEDRLVVKSFVIAKGNKERLELKVVTQLKGKELEDDGFTFGCWLLENASSPFLKGLAKALDEAEIRKKVGLGY*
Ga0114921_1046560523300009150Deep SubsurfaceMSTVTSFVIAEGNEERLELKVVTQLKGKELEAEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0114921_1047135623300009150Deep SubsurfaceMSTIKSFVIAEGKEERLELKVVTQLKGKELEDEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0114921_1047668823300009150Deep SubsurfaceMSLVKSFVIAKGDEERVELKVVTQLKGRKLEGEGLAFGFWLLENASSPFLKGLAEALDEAEIRKKVGLGY*
Ga0114921_1061269013300009150Deep SubsurfaceEERLELKVVAQLKGKELEDEGFAFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY*
Ga0114921_1078274413300009150Deep SubsurfaceKGKEERIELKVASKLDGKELEDEGFAFALWLLENASTPFLRGLANALDEAEIRKEVGLGY
Ga0114921_1079110923300009150Deep SubsurfaceMYLESPEGGMSSVKSFVIAKGEGERVELKVVTQLKGRELEDEGLAFGFWLLENASSPFLRGLAEALDEA
Ga0114921_1107229513300009150Deep SubsurfaceVRVLNNLKSFVIAKGKEERIELKVASKLDGKELEDEGFAFALWLLENASTPFLRGLANALDEA
Ga0114921_1112999713300009150Deep SubsurfaceEERLELKVTTQLKEKRLEEEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0114921_1149721813300009150Deep SubsurfaceSLDGEDRPTVKRFVIAQGNEERLELKVVTQLKGKELEAEGFAFGLWLLENASSPFLRGLAEAMDEAEIRKKVGLGY*
Ga0114925_1043013013300009488Deep SubsurfaceMSTIKSFVIAEGNEERLELKVVTQLKGKELEDEGFTFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0114925_1054664923300009488Deep SubsurfaceMYLESPEGGMSSVKSFVIAKGEGERVELKVVTQLKGRELEDEGLAFGFWLLENASSPFLRGLAESLDEAEIRKKVGLGY*
Ga0114925_1089694013300009488Deep SubsurfaceVRVVNNLKSFVIAKGNEEKVELKVASELGGKELEDEGFAFALWLLENASTPFLRGLAEALDEAEIRKKAGLGY*
Ga0114925_1095536813300009488Deep SubsurfaceMSTVTSFVIAEGNEERLELKVVTQLKGKELENEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0114925_1120177523300009488Deep SubsurfaceVRVISNLKSFVIAKGNEERLELRVVTQLKGKGLEDEGFAFALWLLENASTPFLRGLAEALDEAEIRKKAGLGY*
Ga0114925_1143608013300009488Deep SubsurfaceEDRVELKAVAQLKGKVLEDEGFAFGLWLLENASTPFLRGLARVMDEAEIRKKVGLGY*
Ga0114930_1000788683300009499Deep SubsurfaceMKSFVIAEGNEERLELKVVTQLKGKELEDEGLAFGFWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0114930_1014286123300009499Deep SubsurfaceLNLLDEEGGATVKSFVIAKGKEDRVELKAVAQLKGKVLEDEGFAFGLWLLENASTPFLRGLARVMDEAEIRKKVGLGY*
Ga0114930_1017203523300009499Deep SubsurfaceLKGVRVVNNLKSFVIARGNEERLELRVVTQLKGKGLEEEGFAFALWLLENASTPFLRGLAEALDKAEIRKKAGLGY*
Ga0114930_1039725033300009499Deep SubsurfaceMWLPQEEVLLEQRGMELESLERGMSSVKSFVIAKGDEERVELKVVTRLKGRKLEDEGLAFGFWLLENASSPFLKGLAEALDEAEIRKKVGLGY*
Ga0114920_1004792023300009528Deep SubsurfaceMSQERRTRILDWEDRLVVKSFVIAKGNKERLELKVVTQLKGKELEDDGFTFGCWLLENASSPFLKGLAEALDEAEIRKKVGLGY*
Ga0114920_1014691133300009528Deep SubsurfaceMSTVKSFVIAKGNKESLELKVVTQLKRKELEGEGFTFGLWLLENSSSLFLRGLAEALDEAEIRKKVGLGY*
Ga0114920_1024479323300009528Deep SubsurfaceVVKGFVIAKGNKESLELKVVTQLKGKELEREGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0114920_1029157533300009528Deep SubsurfaceMSTIKSFVIAEGNEERLELKVVTQLKGKELEDEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0114920_1045417723300009528Deep SubsurfaceLNLLDEEGRTTVKSFVIAKGNEDRVELKAVTQLKGKVLEDEGFTFGLWLLENASSPFLRGLARVMDEAEIRKKVGLGY*
Ga0114920_1065940423300009528Deep SubsurfaceVANNLKSFVIAQGNEEKVELRVANQLEGKELEDEGFTFARWLLENASTPFLKGLAEALDEAEIRKKVGLGY*
Ga0114920_1069093423300009528Deep SubsurfaceMLKSFIIAKGNEERLELKVVTQLKGKGLEDEGFAFGCWLLENASSPFLKGLAEALDEAEVRKKVGLGY*
Ga0114920_1104374813300009528Deep SubsurfaceMKLLWWEDRSTVKNFVIAQGNEERLELKVVAQLKGKELEDEGFAFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY*
Ga0114920_1113172113300009528Deep SubsurfaceVRLLNNLKSFVIAKGNEEKVELKVVTQLKGKELEDEGFAFTLWLLENASTPFLKGLAEALDEAEIRKKVGLGY*
Ga0116202_10005529103300010302Anoxic Lake WaterMRSFVIAQGNKEKVELKVVTQLKGRELEEEGSAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0116202_1002868133300010302Anoxic Lake WaterMARPGGQVVKSFIIAQGNEERLELKVVAQLKGKELEDEGFTFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY*
Ga0116202_1010694023300010302Anoxic Lake WaterMRSFIIAQGSDEKAELKIAPQPKELEAEGHAFCLWLLENASSPFLKGLAETLDEAEIKKKVGLGY*
Ga0136653_1021727023300010319Anoxic Lake WaterMKSFIIAQGSDEKAELKIAPQPKELEAEGHAFCLWLLENASSPFLKGLAETLDEAEIKKKVGLGY*
Ga0129297_1001331553300010324Lake SedimentVVKSFVIAQGNEERLELKVVAQLKGKELEDEGFAFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY*
Ga0129297_1051437213300010324Lake SedimentSRGVFAMKSFIIAKGNEEKIELKLSPSHQKDLEAEGRAFCLWLLENASTPFLRGVAETLDEAEIRKKVGLGY*
Ga0129298_1000512463300010328Lake SedimentVVKSFVIAQGNEERLELKVVAQLKGKELEDEGFAFGLWLLENASSPFLKGLAEALDEAEIRKKVGLGY*
Ga0129298_1022215123300010328Lake SedimentMSTVTSFIIAEGNEERLELRVVAQLKGRGLEEEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0129298_1023088823300010328Lake SedimentKSFIIAEGTEERLELKVVTQLKTKKLEGEGFAFGLWLLENASSPFLRGLAEAMDEAEIRKKVGLGY*
Ga0136851_1086360733300010413Mangrove SedimentESRAVVKSFVIAQGSEERLELKVVTQLKGTALEGEGLSFGGWLLENGSSPFLKGLAEALDEAEIRKKVGLGY*
Ga0114922_1141171223300011118Deep SubsurfaceVWEKKESRAVVKCFVIAQGNKERLELKVVAQLKETGLEDEGLGFGYWLFENASSPSRKGLTEALDE
Ga0153915_1229834223300012931Freshwater WetlandsMVRSFAIARGNEENLELKVVTQLKGKVLKDEGLAFGLWLLENASTSFLRGLAEALDEAEIRKKVGLGY*
(restricted) Ga0172365_1007086033300013127SedimentVVKSFVIAQGNEERLELKVVAQLKGKGLEDEGFACGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY*
(restricted) Ga0172365_1009791633300013127SedimentMTRRGGQVVKSFVIAQGNEERLELKVVAQLKGKGLEDEGFACGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY*
(restricted) Ga0172366_1020841023300013128SedimentMSKVKGFVIAQGNKERLELKVVTQLEGKNLEKEGLDFGLWLLENASGPFLKGLAEALDEAEIRKKVGLGY*
(restricted) Ga0172366_1032360423300013128SedimentVVKSFIIAQGNEERLELKVVAQLKGKELEDEGFTFGRWLLENASSPFLKGLAEAMDEAEIRKKVGLGY*
(restricted) Ga0172364_1003492513300013129SedimentHPGKSQPFDAGGSMRSFVIAQGNKEKVELKVVTQLKGRELEEEGSAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
(restricted) Ga0172364_1007868033300013129SedimentMTGRRGQVVKSFVIAQGNEERLELKVVTQLKGKGLEDEGFACGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY*
(restricted) Ga0172363_1015961113300013130SedimentMTGRRGQVVKSFVIAQGNEERLELKVVAQLKGKGLEDEGFACGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY*
Ga0164321_1012636923300014903Marine SedimentMSTMTSFIIAEGNEERLELKVVTQLKGKELEDEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY*
Ga0164321_1025969923300014903Marine SedimentLKGVRVISNLKSFVIARGNEEKVELKVASELGGKELEDEGFAFALWLLENASTPFLRRLAEALDEADIRKKAGLGY*
Ga0180009_1001505923300015370GroundwaterVRLLNNLKSFVIAKGNEERVELRVANQLEGKELEDEGFTFALWLLESASTPFLKGLAQALDEAEIRKKVGLGY*
Ga0180437_1000940343300017963Hypersaline Lake SedimentVRVVNNLKSFVIAKGNEERLELRVVTQLKGKELEDEGFAFALWLLENASTPFLRGLAKALDEAEIRKKTGLGY
Ga0180437_1076386913300017963Hypersaline Lake SedimentMTSFLIAEGNEERLELKVVPQLKGKELEDEGFAFGLWLLENASSPFLRGLARALDEAEIRKKVGLGY
Ga0226659_1026502033300021603Granular SludgeTPGVNVMSTTKRFIIAKGDIQKVELQISPQLKGGGLKKDGFAFGLWLLENASGPFLKGLAEALDDAEIRKKVGLGY
Ga0224506_1003612233300022221SedimentMVRSFVIARGNEERLELKVVTRLKGKVLKDEGLAFGLWLLENASTPFLRGLAEALDEAEIRKKVGLGY
Ga0224506_1040372213300022221SedimentMVRSFVIARGNEERLELKVVTQLKGKELKDEGLACGLWLLENASTPFLRGLAEALDEA
Ga0224506_1042222023300022221SedimentMVRSFVIARGNEERLELKVVTQLKGKALKDEGLAFGLWLLENASTPFLRGLAEALDEAEIRKKVGLGY
Ga0224501_1055757823300022223SedimentVVKSFVIAQGNEERLELKVVAQLKGKELEDEGFTFGLWLLENASSPFLKGLAEAMDEAEIRKEVGLGY
Ga0212089_1003395533300022551Lake SedimentVVKSFVIAQGNEERLELKVVAQLKGKELEDEGFAFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY
Ga0212089_1014370433300022551Lake SedimentMATVKSFIIAKGNKEILELKVVTQLKGRELKAEGFAFGLWLLENASSIFLRGLAEALDEAEIRKKVGLGY
Ga0212089_1034691723300022551Lake SedimentMKSFIIAKGNEEKIELKLSPSHQKDLEAEGRAFCLWLLENASTPFLRGVAETLDEAEIRKKVGLGY
Ga0212121_10008459103300022556Anoxic Lake WaterVVKSFIIAQGNEERLELKVVAQLKGKELEDEGFTFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY
Ga0212121_1006228443300022556Anoxic Lake WaterMRSFVIAQGNKEKVELKVVTQLKGRELEEEGSAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY
Ga0212121_1022048023300022556Anoxic Lake WaterMRSFIIAQGSDEKAELKIAPQPKELEAEGHAFCLWLLENASSPFLKGLAETLDEAEIKKKVGLGY
Ga0209978_1004388633300024263Deep SubsurfaceMSLVKSFVIAKGDEERVELKVVTQLKGRKLEGEGLAFGFWLLENASSPFLKGLAEALDEAEIRKKVGLGY
Ga0209978_1006158723300024263Deep SubsurfaceVANNLKSFVIAKGNEEKVELRVANQLEGKELEDEGFTFARWLLENASTPFLKGLAEALDEAEIRKKVGLGY
Ga0209978_1019158023300024263Deep SubsurfaceMSWGTELEFQTERKMSTVKSFIIAKGNKESLELKVVAQLKGKELEGEGFTFGLWLLENGSSLFLRGLAEALDEAEIRKKVGLGY
Ga0209978_1024083323300024263Deep SubsurfaceVVKSFVIAQGNEERLELKVVAQLKGKELEDEGFTFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY
Ga0209978_1028559723300024263Deep SubsurfaceVVKSFVIAQGNEERLELKVIAQLKGKELEDEGFAFGLWLLENASSPFLKGLAEAMDEAEIRKEVGLGY
Ga0209978_1039663923300024263Deep SubsurfaceMSTIKSFVIAEGKEERLELKVVTQLKGKELEDEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY
Ga0209978_1042022423300024263Deep SubsurfaceVLNNLKSFVIARGNEERLELRVVTQLKGKGLEDEGFAFALWLLENASTPFLRGLAEALDEAEIRKKAGLGY
Ga0209979_1007484103300024353Deep SubsurfaceMKSFVIAEGNEERLELKVVTQLKGKELEDEGLAFGFWLLENASSPFLRGLAEALDEAEIRKKVGLGY
Ga0209979_123733433300024353Deep SubsurfaceMWLPQEEVLLEQRGMELESLERGMSSVKSFVIAKGDEERVELKVVTRLKGRKLEDEGLAFGFWLLENASSPFLKGLAEALDEAEIRKKVGLGY
Ga0209979_127015623300024353Deep SubsurfaceVVNNLKSFVIARGNEERLELRVVTQLKGKGLEEEGFAFALWLLENASTPFLRGLAEALDEAEIRKKAGLGY
Ga0209991_1000079673300024429Deep SubsurfaceVANNLKSFVIAQGNEEKVELRVANQLEGKELEDEGFAFTLWLLENASTPFLKGLAEALDEAEIRKKVGLGY
Ga0209991_1000759223300024429Deep SubsurfaceVRLLNNLKSSVIAKGNEEKVELRVANQLEGKELEDEGFAFTLWLLENASTPFLKGLAEALDEAEIRKKVGL
Ga0209991_1001566533300024429Deep SubsurfaceMVRSFVIARGNEERLELKVVTQLKGKALKDEGLAFGFWLLENASTSFLRGLAEALDEAEIRKKVGLGY
Ga0209991_1002862013300024429Deep SubsurfaceGTELESSERGMLPVKSFVIAKGNEERLELKVVTQLKGKELEEEGLAFGFWLLENASTPFLRGLAEALDEAEIRKKVGLGY
Ga0209991_1005277433300024429Deep SubsurfaceMELESLERGMSSVKSFVIAKGDEERVELKVVTQLKGRKLEDEGLAFGFWLLENASSPFLKGLAEALDEAEIRKKVGLGY
Ga0209991_1019208823300024429Deep SubsurfaceMSQERRTRILDWEDRLVVKSFVIAKGNKERLELKVVTQLKGKELEDDGFTFGCWLLENASSPFLKGLAEALDEAEIRKKVGLGY
Ga0209991_1023974123300024429Deep SubsurfaceVVKGFVIAKGNKESLELKVVTQLKGKELEREGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY
Ga0209991_1033899513300024429Deep SubsurfaceLNLLDEEGRTTVKSFVIAKGNEDRVELKAVTQLKGKVLEDEGFAFGLWLLENASSPFLRGLARVMDEAEIRKKVGLGY
Ga0209991_1034851823300024429Deep SubsurfaceMKLLWWEDRSTVKNFVIAQGNEERLELKVVAQLKGKELEDEGFAFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY
Ga0209977_1013608743300024432Deep SubsurfaceVISNLKSFVIAKGNEERLELRVVTQLKGKGLEDEGFAFALWLLENASTPFLRGLAEALDEAEIRKKAGLGY
Ga0209977_1054693723300024432Deep SubsurfaceMSSVKSFVIAKGEGERVELKVVTQLKGRELEDEGLAFGFWLLENASSPFLRGLAESLDEAEIRKKVGLGY
Ga0209610_108810823300025136Anoxic Lake WaterMARPGGQVVKSFIIAQGNEERLELKVVAQLKGKELEDEGFTFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY
Ga0209314_1000154443300025143Lake SedimentVVKSFVIAQGNEERLELKVVAQLKGKELEDEGFAFGLWLLENASSPFLKGLAEALDEAEIRKKVGLGY
Ga0209182_1010245123300025843Lake SedimentMKSFVIARGNEEKIELKVSPQPEKDLEAEGHNFCLWLLENASSPFLKGLAETLDEAEIRKKVGLGY
Ga0209635_1045428323300027888Marine SedimentLISKPASFVIAKGNEERIELKVTTQLKGKRLKNEGFAFGTWLLENASTPFLRGLAEALDEAEIRKKVGLGY
Ga0209636_1018686123300027893Marine SedimentMSTVKSFVIAKGSKESLELKVITQLKGKELEDEGFAFGLWLLENASSLFLRGLAEALDEAEIRKKVGLGY
Ga0209636_1038804533300027893Marine SedimentMVRSFVIARGNEEMLELKVVTQLKGKALKEEGLAFGLWLLENASTPFLRGLAEALDEAEVRKKVGLGY
Ga0209427_1081857013300027901Marine SedimentMSTVKSFIIAEGKKEKLELEVVTQLGGKELEGEGFAFGLWLLENASSLFLRGLAEALDEAEIRKKVGLGYW
Ga0307379_1084300733300031565SoilVVKSFVIAQGNEERLRLKVVTQLKGKELESEGFAFGCWLLENASSPFLKGLAEALDEAEIRKKVGLGY
Ga0315288_1001639383300031772SedimentMVKNFVIAQGNEEEVELTVVTQLKGRELEDEGFSFGLWLLENASSPFLRGLAQALDEAEIRKKVGLGY
Ga0315288_1097188433300031772SedimentMVRSFVIAEGAEEKLALKIVAELKGKELEEEGFAFGLWLLDNASSPFLKGLAEALDEAEIRKKVGLGY
Ga0315280_10012331143300031862SedimentMKSFVIAQGNEEKVELKVVTQLKGRELEDKGNAFGLWLLENASTPFLRGLAEALDEAEIRKKVGLGY
Ga0315280_1005636653300031862SedimentMRSFVIAQGNEEKVELKVVTQLKGRELEEEGNAFGLWLLENASTPFLRGLAEALDEAEIRKKV
Ga0315280_1007166543300031862SedimentIRMARLGGQVVKSFIIAQGNEERLELKVVAQLKGKELENEGFAFGLWLLENASSPFLKGLAEAMDEAEIRKEVGLGY
Ga0315280_1011477913300031862SedimentPPLLGKERGIKGVRLINNLWSGAMVKSFVIARGNEERVELKVVTQLRGKELENEGLAFGFWLLENASSSFLRGLAEALDEAEIRKKVGLGY
Ga0315280_1019145133300031862SedimentVTSFIIAEGNEERLELRVVAQLKGKGLEEEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY
(restricted) Ga0315310_1018738713300031876SedimentVVKSFVIAQGNEERLELKVVAQLKGKELEDEGLTFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY
(restricted) Ga0315310_1038112023300031876SedimentVVKSFIIAQGNEERLELKVVAQLKGKELEDEGFTFGLWLLENASSPFLKGLAEAMDEAEIRK
(restricted) Ga0315314_100782673300031877SedimentVVKSFIIAQGNEERLELKVVTQLKGKELEDEGFTFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY
Ga0315285_1013200423300031885SedimentMKSFVIAEGSEERIELKVTTQLKGRELEEEGLAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY
(restricted) Ga0315312_104711133300031898SedimentMSIAKSFVIAEGDEERLELKVITQLKGKELKDEGFAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY
Ga0315294_1109028523300031952SedimentVVKSFVIAQGNEERLELKIVAQLKGKELEDEGFAFGLWLLENASSPFLKGLAEAMDEAEIRKKVGLGY
Ga0315274_1015539643300031999SedimentMVKNFVIAQGNEEGVELKVVTRLKGRELEGEGFSFGLWLLENASSPFLRGLAQALDEAEIRKKVGLGY
Ga0315296_1001000883300032020SedimentMRSFVIAQGNEEKLELKVVTQLKGRELEEEGSAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY
Ga0315296_1003765753300032020SedimentMRSFVIAQGNEEKVELKVVTQLKGRELEEEGNAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY
Ga0315296_1061100413300032020SedimentMKSFVIAQGNEEKVELKVVTQLKGRELEDEGNAFGLWLLENASTPFLRGLAEALDEAEIRKKVGLGY
Ga0315289_1005334153300032046SedimentMKSFVIARGNEEKIELKVSPQPEKDLEAEGYNFCLWLLENASSPFLKGLAETLDEAEIRKKVGLGY
Ga0315289_1105499823300032046SedimentMRSFVIAQGNEEKVELKVVTQLKGRELEEEGSAFGLWLLENASSPFLRGLAEALDEAEIRKKVGLGY
Ga0315282_1002880353300032069SedimentMVKGFVIARGNEERVELKVVTQLRGKELENEGLAFGFWLLENASSPFLRGLAEALDEAEIRKKVGLGY
Ga0315282_1005447043300032069SedimentMVKNFVIAQGNEEEVELKVVTQLKGRELEDEGFSFGLWLLENASSPFLRGLAQALDEAEIRKKVGLGY
Ga0315279_1012558313300032070SedimentMLKSFIIARGNEEKIELKVSPQPEKDLEAEGYNFCLWLLENASSPFLKGLAETLDEAEIRKKVGLGY
Ga0334965_0118574_845_10573300033991SedimentMTMVASFVIARGKEERLELMITSRLKGKGLEDEGFTFGLWLLENASSPFLRGLARALDEAEIRKKVGLGY

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.