Metagenome Family F059221

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059221
Family Type	Metagenome
Number of Sequences	134
Average Sequence Length	61 residues
Representative Sequence	MPFEYLPIMAQNSAPKPPRVLVSPSKPAWCATTKPVDESRVALLSSAALRLATQEPFIP
Number of Associated Samples	119
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.81 %
% of genes near scaffold ends (potentially truncated)	97.76 %
% of genes from short scaffolds (< 2000 bps)	92.54 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.343 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.433 % of family members)
Environment Ontology (ENVO)	Unclassified (28.358 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.284 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.74% β-sheet: 0.00% Coil/Unstructured: 71.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF01168	Ala_racemase_N	35.82
PF01814	Hemerythrin	7.46
PF01336	tRNA_anti-codon	2.99
PF02325	YGGT	1.49
PF12680	SnoaL_2	1.49
PF13483	Lactamase_B_3	1.49
PF03401	TctC	0.75
PF01966	HD	0.75
PF00171	Aldedh	0.75
PF01979	Amidohydro_1	0.75
PF01694	Rhomboid	0.75
PF02661	Fic	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	1.49
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.75
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.75
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.75
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.34 %
Unclassified	root	N/A	18.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.34 %
Unclassified	root	N/A	18.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.34 %
Unclassified	root	N/A	18.66 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.99 %
Unclassified	root	N/A	18.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	49.25 %
Unclassified	root	N/A	18.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	49.25 %
Unclassified	root	N/A	18.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	45.52 %
Unclassified	root	N/A	18.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	45.52 %
Unclassified	root	N/A	18.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c1729991	Not Available	541	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105883340	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1067237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300000890\|JGI11643J12802_10033647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1100	Open in IMG/M
3300002407\|C687J29651_10272365	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300003397\|JGI26133J50247_103336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300003987\|Ga0055471_10196849	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300004052\|Ga0055490_10026534	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300004070\|Ga0055488_10011540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1471	Open in IMG/M
3300004808\|Ga0062381_10205542	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005294\|Ga0065705_10076245	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005295\|Ga0065707_10037492	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	983	Open in IMG/M
3300005328\|Ga0070676_10178936	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300005332\|Ga0066388_103556745	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005332\|Ga0066388_103877061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	763	Open in IMG/M
3300005364\|Ga0070673_100944827	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005441\|Ga0070700_100140484	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300005457\|Ga0070662_100173878	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300005471\|Ga0070698_101254442	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005471\|Ga0070698_101550952	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300005530\|Ga0070679_100994900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	782	Open in IMG/M
3300005545\|Ga0070695_101218966	Not Available	619	Open in IMG/M
3300005545\|Ga0070695_101732328	Not Available	523	Open in IMG/M
3300005546\|Ga0070696_101542583	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300005617\|Ga0068859_100992627	Not Available	922	Open in IMG/M
3300005719\|Ga0068861_101772321	Not Available	612	Open in IMG/M
3300006175\|Ga0070712_100446712	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300006196\|Ga0075422_10544271	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300006845\|Ga0075421_100475293	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300006845\|Ga0075421_101037210	All Organisms → cellular organisms → Bacteria → Proteobacteria	926	Open in IMG/M
3300006846\|Ga0075430_100163339	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300006852\|Ga0075433_10093743	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
3300006853\|Ga0075420_100150397	All Organisms → cellular organisms → Bacteria → Proteobacteria	2043	Open in IMG/M
3300006854\|Ga0075425_100772211	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300006876\|Ga0079217_10041160	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300006880\|Ga0075429_100861276	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	793	Open in IMG/M
3300006903\|Ga0075426_11506479	Not Available	511	Open in IMG/M
3300006918\|Ga0079216_10045521	All Organisms → cellular organisms → Bacteria → Proteobacteria	1865	Open in IMG/M
3300006918\|Ga0079216_10313281	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	936	Open in IMG/M
3300006969\|Ga0075419_10532198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	819	Open in IMG/M
3300007004\|Ga0079218_13989575	Not Available	502	Open in IMG/M
3300007076\|Ga0075435_100971775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300009100\|Ga0075418_12775086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300009137\|Ga0066709_103527718	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300009147\|Ga0114129_12951283	Not Available	561	Open in IMG/M
3300009156\|Ga0111538_12386815	Not Available	664	Open in IMG/M
3300009162\|Ga0075423_10222094	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300009553\|Ga0105249_10099073	All Organisms → cellular organisms → Bacteria	2738	Open in IMG/M
3300010166\|Ga0126306_10329517	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300010360\|Ga0126372_13129349	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300010362\|Ga0126377_10399660	All Organisms → cellular organisms → Bacteria → Proteobacteria	1385	Open in IMG/M
3300011437\|Ga0137429_1028362	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300011444\|Ga0137463_1337714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300012179\|Ga0137334_1149716	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300012509\|Ga0157334_1015349	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	783	Open in IMG/M
3300012511\|Ga0157332_1034155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	663	Open in IMG/M
3300013306\|Ga0163162_10787544	Not Available	1069	Open in IMG/M
3300014872\|Ga0180087_1045550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	820	Open in IMG/M
3300015259\|Ga0180085_1093496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	883	Open in IMG/M
3300015374\|Ga0132255_102634427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300016371\|Ga0182034_11187605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	663	Open in IMG/M
3300018028\|Ga0184608_10050725	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300018052\|Ga0184638_1007870	All Organisms → cellular organisms → Bacteria	3547	Open in IMG/M
3300018061\|Ga0184619_10276911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	770	Open in IMG/M
3300018066\|Ga0184617_1176540	Not Available	634	Open in IMG/M
3300018072\|Ga0184635_10044906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1696	Open in IMG/M
3300018074\|Ga0184640_10318668	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300018075\|Ga0184632_10430374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300018082\|Ga0184639_10080466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1711	Open in IMG/M
3300018089\|Ga0187774_10221724	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1050	Open in IMG/M
3300018422\|Ga0190265_11538679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300018422\|Ga0190265_11776026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	725	Open in IMG/M
3300018422\|Ga0190265_11797107	Not Available	721	Open in IMG/M
3300018422\|Ga0190265_12917680	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300018433\|Ga0066667_12066017	Not Available	526	Open in IMG/M
3300018469\|Ga0190270_10585544	Not Available	1084	Open in IMG/M
3300018476\|Ga0190274_11399038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	789	Open in IMG/M
3300018476\|Ga0190274_12334203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300019889\|Ga0193743_1085862	Not Available	1221	Open in IMG/M
3300020010\|Ga0193749_1025160	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300020061\|Ga0193716_1061654	Not Available	1712	Open in IMG/M
3300020193\|Ga0194131_10319597	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300021090\|Ga0210377_10009101	All Organisms → cellular organisms → Bacteria	7802	Open in IMG/M
3300021184\|Ga0196959_10153388	Not Available	566	Open in IMG/M
3300025154\|Ga0209417_1069954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1685	Open in IMG/M
3300025164\|Ga0209521_10679570	Not Available	502	Open in IMG/M
3300025165\|Ga0209108_10186838	Not Available	1077	Open in IMG/M
3300025312\|Ga0209321_10362365	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300025322\|Ga0209641_10174245	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300025324\|Ga0209640_10871222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300025899\|Ga0207642_10378196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	842	Open in IMG/M
3300025910\|Ga0207684_10161059	All Organisms → cellular organisms → Bacteria	1932	Open in IMG/M
3300025921\|Ga0207652_10030714	All Organisms → cellular organisms → Bacteria	4502	Open in IMG/M
3300025930\|Ga0207701_10132593	All Organisms → cellular organisms → Bacteria	2216	Open in IMG/M
3300025937\|Ga0207669_10497593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	975	Open in IMG/M
3300025938\|Ga0207704_11253229	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300025939\|Ga0207665_10605431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	856	Open in IMG/M
3300025944\|Ga0207661_11470783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300025972\|Ga0207668_11786074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300026118\|Ga0207675_101792642	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300026535\|Ga0256867_10039397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1950	Open in IMG/M
3300026535\|Ga0256867_10141233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	907	Open in IMG/M
3300027424\|Ga0209984_1017706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	959	Open in IMG/M
3300027511\|Ga0209843_1017866	All Organisms → cellular organisms → Bacteria → Proteobacteria	1398	Open in IMG/M
3300027552\|Ga0209982_1005453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1839	Open in IMG/M
3300027691\|Ga0209485_1181746	Not Available	646	Open in IMG/M
3300027722\|Ga0209819_10089354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1073	Open in IMG/M
3300027722\|Ga0209819_10141156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	843	Open in IMG/M
3300027722\|Ga0209819_10177204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	745	Open in IMG/M
3300027722\|Ga0209819_10247709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300027840\|Ga0209683_10584054	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300027873\|Ga0209814_10492496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300027909\|Ga0209382_10270316	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300027909\|Ga0209382_11946696	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300030006\|Ga0299907_10335044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1228	Open in IMG/M
3300031228\|Ga0299914_11158272	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	622	Open in IMG/M
3300031538\|Ga0310888_10641148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	648	Open in IMG/M
3300031720\|Ga0307469_10038214	All Organisms → cellular organisms → Bacteria	2883	Open in IMG/M
3300031820\|Ga0307473_11388460	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300031824\|Ga0307413_10026182	All Organisms → cellular organisms → Bacteria	3211	Open in IMG/M
3300031911\|Ga0307412_11251910	Not Available	666	Open in IMG/M
3300031949\|Ga0214473_11005564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	880	Open in IMG/M
3300031965\|Ga0326597_10327036	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300032004\|Ga0307414_12258202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300032012\|Ga0310902_11073338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300032144\|Ga0315910_11031223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300032144\|Ga0315910_11155175	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300032174\|Ga0307470_11921738	Not Available	504	Open in IMG/M
3300033158\|Ga0335077_11763960	Not Available	583	Open in IMG/M
3300033406\|Ga0316604_10544083	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300033407\|Ga0214472_10114174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2673	Open in IMG/M
3300033550\|Ga0247829_11547996	Not Available	547	Open in IMG/M
3300034151\|Ga0364935_0054290	Not Available	1173	Open in IMG/M
3300034354\|Ga0364943_0127438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	905	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.39%
Host-Associated	Host-Associated	27.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.73%
Plants	Host-Associated → Plants	27.61%
Aquatic	Environmental → Aquatic	18.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.15%
Sediment	Environmental → Aquatic → Sediment	9.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.46%
Freshwater	Environmental → Aquatic → Freshwater	6.72%
Marine	Environmental → Aquatic → Marine	2.24%
Floodplain	Environmental → Terrestrial → Floodplain	1.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.42%
Loam	Environmental → Terrestrial → Soil → Loam	12.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.49%
Sand	Environmental → Terrestrial → Soil → Sand	1.49%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.49%
Lake	Environmental → Aquatic → Freshwater → Lake	0.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.73%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.24%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.24%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.24%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.49%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.75%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.97%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.99%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.24%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.24%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.24%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.49%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.49%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.49%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.75%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.75%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300003397	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300025154	Soil microbial communities from Rifle, Colorado, USA - Groundwater F2	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_17299912	3300000033	Soil	MALEYLPIMAQSSASKPPRVLVAPSNPSWCAVKKPVNQSRVALLTSAALRLNRQE
INPhiseqgaiiFebDRAFT_1058833401	3300000364	Soil	MALEYLPIMAQSSAPKPPRVLVSPSKPSWCPVEKPVNQSRVALLTSAALRLNRQEPFAPGEDLSYRLIPSDSK
AF_2010_repII_A100DRAFT_10672372	3300000655	Forest Soil	MALEYLPIMAQSGAPKPPRVLVSPSKTFWCPVTKPVHQSRVVLLTSAALRLTHQSPFTPKEDLSYRLVPSDPAACE
JGI11643J12802_100336473	3300000890	Soil	VSLDYLSIMAQAGAPKPPRVLVLPSRHAWSPVAKPLKESTVALLSSAALRLENQK
C687J29651_102723652	3300002407	Soil	MPVEYLPIMARNSAPKPPRVLAAPSKPSWCPITKPVDRSRVALLTSAALRLAHQPHFTPREDLSYRLVSADPSAGAIVI
JGI26133J50247_1033362	3300003397	Arabidopsis Thaliana Rhizosphere	MPFEYLPVMAHNSAPKPPRVIATPKRRAWCPITKPLNESRVALLSSAALRLANQEPFIPREDLSYRRVPSDPTS
Ga0055471_101968492	3300003987	Natural And Restored Wetlands	MAFEYLPVMAQNSAPKPPRQLVPPSKPAWCPVKQPLSQARVALLTSAALRLARQEPFIPREDLSY
Ga0055490_100265341	3300004052	Natural And Restored Wetlands	MPFEYLPIMARNSAPKPPRVLVSPSKTAWCPLTKSVRESRIALLSSAALRLAHQE
Ga0055488_100115403	3300004070	Natural And Restored Wetlands	MAFEYLPIMAQASAPKPPRVLAAPSKRSWSPTAKPVSESRVAILTSAALRLRSQKPF
Ga0062381_102055422	3300004808	Wetland Sediment	MPFQYLPVMAQNSAPKPPRVLVQPSKPAWTPIEKPLSESRVALLSSAALRLANQEPFIPREDFSYRRV
Ga0065705_100762452	3300005294	Switchgrass Rhizosphere	MAFEYLPIMAQNSAPKPPRALAKPSKFAWCAVTKPLFQSRMALLTSAALRLETQLPFVPRDDLSYRRVPSDPA
Ga0065707_100374921	3300005295	Switchgrass Rhizosphere	MAFEYLPIMAQNSAPKPPRVLAQPAKFAWYAVTKPLTQSRVALLTSAAL
Ga0070676_101789363	3300005328	Miscanthus Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPVWCRLSKPARESRIALLSSAALRLVDQAPFIPREDLSYRRLP
Ga0066388_1035567451	3300005332	Tropical Forest Soil	MALEYLPLMAQSSARKPPRILVSPSKFSWCPVTKPVNESRVALLTSAALRLNRQKPFAPAEDLTYR
Ga0066388_1038770612	3300005332	Tropical Forest Soil	MPFEYLPIMAQNSAPNPPRVLVQPTNPAWCATTKPLDKAGVALLTSAALRLADQKPFI
Ga0070673_1009448271	3300005364	Switchgrass Rhizosphere	MAFEYLPIMAQNSAPKPPRVLAQPAKFAWCAVTKPLAQSRVALLTSAALRLETQPPFVPREDLSYR
Ga0070700_1001404841	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLSKPARESRIALLSSAALRLVDQAPFIPREDLSYRRLPADPGAGAI
Ga0070662_1001738784	3300005457	Corn Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLSKPARESRIALLSSAALRLVDQVPFIPRELSYRRL
Ga0070698_1012544421	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPLEYLPIMAQNSAPKPPRVLVSLSKPAWCPITKPVNQSRVALLSSAALRLAHQEPFIPREDFG
Ga0070698_1015509522	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLLEYLPIMAQNSAPKPQRELASPSKTAWCPLKKPISESRVALLSSAALRLANQEP
Ga0070679_1009949002	3300005530	Corn Rhizosphere	MAFEYLPIMAQNSAPKPPRVLVKPSKFAWCAVTKPLFQSRVALLTSAALRV
Ga0070695_1012189661	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPFEYLPVMEKNSAPKPPRVLAAPSKPAWQAAIKAVNRSRVALLSSAALRLDQQKPFVPREDLSYREVSSNPSA
Ga0070695_1017323281	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPFEYLPVMAQNSAPKPPRVLATPTARAWLPLAKPVSESRVALLSSAALRLTDQ
Ga0070696_1015425831	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPLEYLPIMAQNSAPKPPRVLVSLSKPAWCPITKPVNQSRVALL
Ga0068859_1009926271	3300005617	Switchgrass Rhizosphere	MPFEYLPVMEKNSAPKPPRVLAAPSKPAWQAAIKAVNRSRVALLSSAALRLDQQKPFVPREDLSYRE
Ga0068861_1017723211	3300005719	Switchgrass Rhizosphere	MPFEYLPVMEKNSAPKPPRVLAAPSKPAWQAAIKAVNRSRVALLSSAALRLDQQKPFVPREDL
Ga0070712_1004467121	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAFEYLPIMAQNSAPKPPRVLAQPAKFAWCAVTKPLAQSRVALLTSAALRLETQ
Ga0075422_105442711	3300006196	Populus Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLTKPARESRIALLSSAALRLVDQAPFIPREDLSYRRLPADPGAGTIIIDH
Ga0075421_1004752933	3300006845	Populus Rhizosphere	VPLDYLPIMAQNSAPKPPRVLASPSKPAWCEITNPVSASRVALLSSAALRLANQKPFIPREDSSYRRVPSDP
Ga0075421_1010372103	3300006845	Populus Rhizosphere	MSLEYLPIMAEAGAPKPPRVLVSPSKQAWSPVTKPISQSRIALLSSAALRLEDQEPFVPREDLSYRR
Ga0075430_1001633394	3300006846	Populus Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLSKPARESRIALLSSAALRLVDQAPFIPREDLSYRRLP
Ga0075433_100937431	3300006852	Populus Rhizosphere	MALEYLPIMAQSGAPKPPRILVSPSKPSWCSVIKPVQQSRVALLTSA
Ga0075420_1001503974	3300006853	Populus Rhizosphere	MSFEYLPIMAQAGAPKPPRVLVPPSKQAWSPVTKPVNQSTIALLSSAALRLPDQEPFVPRED
Ga0075425_1007722113	3300006854	Populus Rhizosphere	MALEYLPIMAQNSASKAPRVLAKPSKFAWCVVSKPLIQSRVALLTSAALRLETQRPFVPREDLSYRRV
Ga0079217_100411604	3300006876	Agricultural Soil	MSFEYLPIMAQAGAPKPPRVLVPPSKPAWSPTTKPVNQSTIALLSSAALRLQDQDPFVPREDLS
Ga0075429_1008612762	3300006880	Populus Rhizosphere	MPFEYLPIMAQHAAPKPPRVLAAPSKPAWCGLSKPARESRIALLSSAALRLV
Ga0075426_115064792	3300006903	Populus Rhizosphere	MALEYLLIMVQSSAPKPRVLVAPSQPAWHPVRKPVQGSRVALLTSAALRHDR*
Ga0079216_100455211	3300006918	Agricultural Soil	MSFEYLPIMAQAGAPKPPRVLVPPSKQAWSPITKPVNQSTIALLSSAALRLQDQKPFVPR
Ga0079216_103132811	3300006918	Agricultural Soil	MSLEYLPIMAEAGAPKPLRVLVSPSKQAWSPVTKPISQSRIALLSSAALR
Ga0075419_105321981	3300006969	Populus Rhizosphere	MSFEYLPIMAQAGAPKPPRVLVLPSKQAWSPITKPVSQSTIALLSSAALR
Ga0079218_139895751	3300007004	Agricultural Soil	MSLDYLPIMAEAGAPKPPRVLVLPSKQAWSPVTKAIKQSTIALLSSAALRLEDQEPFVPRQDLSYRRIPADP
Ga0075435_1009717752	3300007076	Populus Rhizosphere	MPFEYLPIMAQRSAPKPPRVLAAPSKPAWCGLSKPARESRIALL
Ga0075418_127750862	3300009100	Populus Rhizosphere	MPLEYLPIMAKNSAPKPPRVLAVPSKPAWCPITKPVSESRVALLSSAAL
Ga0066709_1035277181	3300009137	Grasslands Soil	MALEYLPIMAQSSMPKPPRVLVVPSKPSWCPLIKPVNESRVALLTSAA
Ga0114129_129512832	3300009147	Populus Rhizosphere	MSFEYLPIMAQAGAPKPPRVLVLPSKQAWSPITKPVSQSTIALLSS
Ga0111538_123868151	3300009156	Populus Rhizosphere	MAFEYLPIMAQNSAPKPPRVLAQPAKFAWCAVTKPHTQSRVALLTSAALRLETQPPFVPREDLSYRR
Ga0075423_102220944	3300009162	Populus Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLSKPARESRFALLSSAALRL
Ga0105249_100990735	3300009553	Switchgrass Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPVWCRLSKPARESRIALLSS
Ga0126306_103295173	3300010166	Serpentine Soil	MAQNSAPKPPRILVAPSKPAWCPITKPLNESRISLVSSAALRLAYQEPFIPREDFSY
Ga0126372_131293492	3300010360	Tropical Forest Soil	MAQSSAPKPPRVLVSPSKPSWCAPSKSVNASRVALLTSAALRLRDQPPFTPKEDLGYRLVSSDPAAGDIVIDHHSRIG
Ga0126377_103996601	3300010362	Tropical Forest Soil	MAFDYLSIMALAGAPKPPRVLAAPPTLAWCRIEKPLSESRVALLSSAALRLAD
Ga0137429_10283621	3300011437	Soil	MPFQYLSLMAQNSAPKPPRVLASPSKPAWCAITKPVSESRVALLSSAALRLAQ
Ga0137463_13377142	3300011444	Soil	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLTKPARESRIALLSSAALRLVDQAPFIPREDLSYRRLPAD
Ga0137334_11497162	3300012179	Soil	MPFEYLPIMAANTAPNPPRMLVAPSQRAWCPMRKSLDAARVALLTSA
Ga0157334_10153492	3300012509	Soil	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLSKPARESRIALLSS
Ga0157332_10341552	3300012511	Soil	MAFEYLPIMAQNSAPKPPRVLVQPAKFAWCAVTKPLTQSRVALLTSAALRLETQPPFLPREDLSY
Ga0163162_107875442	3300013306	Switchgrass Rhizosphere	MPFEYLPVMEKNSAPKPPRVLAAPSKPAWQAAIKAVNRSRVALLSSAALRLDQQKPFVPREDLSYREISSEPRA
Ga0180087_10455501	3300014872	Soil	MPFQYLPLMAQNSAPKPPRILASPSKTAWCPITKPVSESRVALLSSAALRLANQEPFIPREDSSYRRVP
Ga0180085_10934962	3300015259	Soil	MPFEYLPIMAANTAPKPPRVLVAPSQRAWCPMRKSLDAARVALLTSAALRLSSQEPFIPREDLSYRLVP
Ga0132255_1026344272	3300015374	Arabidopsis Rhizosphere	MPFEYLPIMAQNSAPKPPRVLVSLSKPAWCPITKPVSESRVALLSSAALRLANQAPFIP
Ga0182034_111876051	3300016371	Soil	MAFEYLPIMTQNSAPKPPRVLVKPSKFAWCPVTKPLNQSRVALLSSAALRLTDQPPFVPRDDL
Ga0184608_100507251	3300018028	Groundwater Sediment	MALEYLPIMAQSSAPKPPRVLASPSKPSWCPVEKPANQSRVALLTSAALRFNRQEPFAPGEDLT
Ga0184638_10078704	3300018052	Groundwater Sediment	MAFEYLPIMAANGAPKPPRRLVTPSKPAWCPVKKPLHESRVALLSSAALRQTNQEPFIPREDLSYRRVPSDPSAGEI
Ga0184619_102769112	3300018061	Groundwater Sediment	MPLEYLPIMAQNAAPKPQRELASPSKTAWCPLKKPISESRVALLSSAALRLANQE
Ga0184617_11765402	3300018066	Groundwater Sediment	MPFEYLPIMDKNSAPKLPRVLATPSKRAWQAAIKAVNRSRVALLSSAALRLDQQKPFVPREDLS
Ga0184635_100449064	3300018072	Groundwater Sediment	MALEYLPIMAQSSAPKPPRVLVSPSKPSWCAVEKPVNQSRVALLTSAALRLNRQEPFAPGEDLTYRLIPSGFQDK
Ga0184640_103186682	3300018074	Groundwater Sediment	MALEYLPIMAQSSAPKPPRVLVSPSKPSWCAVEKPVNQSRVALLTSAALRLNRQEPFAPGEDLTYR
Ga0184632_104303741	3300018075	Groundwater Sediment	MPFEYLPIMAQNSAPKPARVLVAPSKTAWCPIKKPASQSRIALLSSAALRLTNQKSFIPREDLS
Ga0184639_100804662	3300018082	Groundwater Sediment	MPLEYLPIMAQNAAPKPPRVLVAPSKPAWCAIAKPVNESRVALLSSAALRLATR
Ga0187774_102217241	3300018089	Tropical Peatland	MPFEYLPIMAQNSAPKPPRVLVSPSKPAWCATTKPVDESRVALLSSAALRLATQEPFIP
Ga0190265_115386792	3300018422	Soil	MSLEYLPIMAQAGAPKPPRVLVSPSQQAWFPITKPVSESTVALLSSAALRLEDQEPFVPREDLSYRRVLSDPAAGTIIID
Ga0190265_117760261	3300018422	Soil	MAFEYLPVMAQNSAPKPPRRLVAPSKTAWCPIEKPVSQARVALLTSAALRLAHQEPFIPREDLSF
Ga0190265_117971071	3300018422	Soil	MPFEYLPVMAQNSAPKPPRVLVSPSKTAWRPIQKSLSESRVALLSS
Ga0190265_129176801	3300018422	Soil	MAFEYLPIMAQNTAPKPPRVLAAPSARSWCPVTKPLNEMRLALLSSAALRLTDQEPFIPREDLSY
Ga0066667_120660171	3300018433	Grasslands Soil	MALEYLPIMAQSSMPKPPRVLVVPSKPSWCPLIKPVNESRVALLTSAALRLKDQPPFTPREDLT
Ga0190270_105855442	3300018469	Soil	MPFQYLPVMAQNSAPKPPRVLVLPTKPAWCPITKPLSESRVALLSSAALRLVD
Ga0190274_113990382	3300018476	Soil	MPLEYLPIMAQNSAPKPPRVLAAPSKPAWCPITKPVNESRVALLSS
Ga0190274_123342031	3300018476	Soil	MPFQYLPVMAQNSAPKPPRVLVSPTKTAWCPIKKPLSESRVALLSSAALRLADQEPFIPREDFNY
Ga0193743_10858621	3300019889	Soil	MPFEYLPVMEKNTAPKPPRVLAAPSKPAWQAAIKALNRSRVALLSSAALRLDQQKPFVPREDLSYREVSSNPSAGRI
Ga0193749_10251603	3300020010	Soil	MPLEYLPIMAQNSAPKPQRELASPSKTAWCPLKKPISESRVALLSSAALRLAN
Ga0193716_10616541	3300020061	Soil	MPFEYLPIMEKNSAPKPPRVLAAPSKPAWQAVIKAVNRSRVALLSSAALRLDQQKPFVPREDLSYREVSSNPSAGRITIDHH
Ga0194131_103195971	3300020193	Freshwater Lake	MPLEYLPIMEQNAAPKPPRVLAAPSNPAWQAITKPVNQSRV
Ga0210377_100091011	3300021090	Groundwater Sediment	MAQAGAPKPPRVLVAPSNPAWCPIKKPLSRSRVALLSSAALRLADQRPFLPREDLTYRLVPSDPAAGEIVIDH
Ga0196959_101533881	3300021184	Soil	MSLEYLPIMAHAAAPKPPRVLVSPSKQAWSLISKPVNQSTVALL
Ga0209417_10699541	3300025154	Soil	MAQAGAPKPPRVLVAPSNPAWCPIKKSLSRSRVALLSSAALRLADQRPFLLREDLTYRLVPSDPAA
Ga0209521_106795701	3300025164	Soil	MPFEYLPIMARNAAPKPPRVLVAPSKPAWWPVTKPLHRSRVALLTSAALRL
Ga0209108_101868382	3300025165	Soil	MPFEYLPIMAQNSAPKPPRVLVTPSKSAWSPVTKLVSQSRVALLSSAALRPVHRILIAG
Ga0209321_103623651	3300025312	Soil	MPVEYLPIMARNSAPKPPRVLAAPSKPSWCPITKPVDRSRVALLTSAALRLAHQPHFTPR
Ga0209641_101742454	3300025322	Soil	MPLEYLPIMARNSTPKPPRVLVAPSKPSWRPMTKPLERSRVALLTSAALRLAHQQPFVPREDLSYRRVSSDPAAGAIVIDH
Ga0209640_108712221	3300025324	Soil	MPLEYLPIMARNSAPKAPRLLVAPSKPSWHAITKPLERSRVALLTSAALRLADQQPFIPREDLSYRRVPSDPAAGEIVI
Ga0207642_103781961	3300025899	Miscanthus Rhizosphere	MVFEYLPIMAQNSAPKPPRVLVKPSNFAWCAVTKPLFQSRVALLTSAALRVESQ
Ga0207684_101610591	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MALEYLPIMAQSGAPKPPRILVSPSKPSWCSVIKPVQQSRVALLTSAALRL
Ga0207652_100307147	3300025921	Corn Rhizosphere	MAFEYLPIMAQNSAPKPPRVLVKPSKFAWCAVTKPLFQSRVALLTSAALRVESQPPFVPREDLSYRRVRSDPAIGPI
Ga0207701_101325931	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLTKPARESRIALLSSAALRLVDQAPFIPREDLSYRRLPADPG
Ga0207669_104975932	3300025937	Miscanthus Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLSKPARESRIALLSSAALRLVDQAPFIP
Ga0207704_112532292	3300025938	Miscanthus Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLSKPARESRIALLSSAALRLVDQA
Ga0207665_106054312	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAFEYLPIMAQNSAPKPPRVLAQPAKFAWCAVTKPLAQSRVALLTSAALRLETQPPFVPREDLSYRR
Ga0207661_114707831	3300025944	Corn Rhizosphere	MAFEYLPIMAQNSAPKPPRVLVKPSKFAWCAVTKPLFQSRVALLTSAAL
Ga0207668_117860742	3300025972	Switchgrass Rhizosphere	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLSKPARESRIALLSSAALRLVDQAPFIPREDLSYRRLPADPGA
Ga0207675_1017926422	3300026118	Switchgrass Rhizosphere	MPFQYIPVMAQNSAPKPPRMLVSPSKPAWCPITKPLNESRIALVSSAALRLAHQEPFIPREDFGYRRVPS
Ga0256867_100393971	3300026535	Soil	MPFEYLPIMAQNSAPKPPRVLFTPSKSAWSPVTKLVSQSRVALLSSAALRLANQQPFS
Ga0256867_101412331	3300026535	Soil	MPFDYLPVMAANAAPKPPRRLVAPSKPAWCPVRKSARAARVALL
Ga0209984_10177062	3300027424	Arabidopsis Thaliana Rhizosphere	MPFEYLPIMAQNSAPKPPRVIATPKRRAWCPITKPLNESRVALLSSAALRLANQEPFI
Ga0209843_10178663	3300027511	Groundwater Sand	MALEYLPIMAQSSAPKPPRVLVSPSKPSWCPLTKPANESCVALLTSAALRPKDQPPFTPREDLSYRLVSSDP
Ga0209982_10054533	3300027552	Arabidopsis Thaliana Rhizosphere	MPFEYLPVMAHNSAPKPPRVIATPKRRAWCPITKPLNESRVALLSSAALRLAN
Ga0209485_11817462	3300027691	Agricultural Soil	MPFQYLSIMAQNSAPKPPRVLAAPSAPAWCPVTKPLNEMRVALLSSAA
Ga0209819_100893541	3300027722	Freshwater Sediment	MALEYLPIMAQSAGPKPPRVLVSSSMPSWFRVAKPVDESRVALLTSAALRLTHQQPFAPGEDSSYRLIPSDSRASEIVIDH
Ga0209819_101411562	3300027722	Freshwater Sediment	MSFEYLPIMAHGAAPKPPRVLVSPSKQAWIPLTEPVNESKVGLL
Ga0209819_101772042	3300027722	Freshwater Sediment	MALEYLPIMARSATPKPPRVLVSSSMPSWLPVAKPVKESRVALLTSAALRLTHQQPFASGEDLSYRLI
Ga0209819_102477092	3300027722	Freshwater Sediment	MALEYLPIMAQSAAPKPPRVLVSSSKPSWFPVAKPVDQSRLALVTSAALRLK
Ga0209683_105840542	3300027840	Wetland Sediment	MPFQYLPVMAQNSAPKPPRVLVSPSKPAWCPVKKPLNQSRVAMLSSAA
Ga0209814_104924961	3300027873	Populus Rhizosphere	MPLEYLPIMAQNSAPKPQRELASPSKTAWCPLKKPISESRVALLSSAALRLANQEPFVPREDLSYR
Ga0209382_102703164	3300027909	Populus Rhizosphere	MTQSSAPKPPRVLVSPSKPSWCAVEKPVNQSRVALLTSAALRLNRQEPFAPGEDLSYRLIPSDSK
Ga0209382_119466962	3300027909	Populus Rhizosphere	MPLEYLPIMAQNSAPKPPRVLAVPSKPAWCPITKPVSESRVALLSSAALRLAHQTPFIPREDSSYRRVPSDPGAGDIII
Ga0299907_103350441	3300030006	Soil	MAFEYLPIMAQNSAPKPPRQLAAPSKQAWRPVSKPLSQSRVALLTSAAL
Ga0299914_111582722	3300031228	Soil	MAQNSAPKPPRQLAAPSKQAWRPVSKPLSQSRVALLTSAALRLAHQDPFIPREDLSY
Ga0310888_106411482	3300031538	Soil	MPLEYLPIMAQNSAPKPPRVLVSLSKPAWCPITKPVSESRVALLS
Ga0307469_100382144	3300031720	Hardwood Forest Soil	MALEYLPIMAQSSASKPPRVLVAPSNPSWCAVKKPVNQSRVALLTSAALRLNRQEPFAPGEDLTYRLIP
Ga0307473_113884601	3300031820	Hardwood Forest Soil	MPFEYLPIMAQHSAPKPPRVLAAPSKPAWCGLSKPPRESRIALLSSAALRLVDQAPFIPREDLSYRRLPADPGAGAI
Ga0307413_100261821	3300031824	Rhizosphere	MSFEYLPIMAQAGAPKPPRVLVPPSKQAWSPITKRVNQSTIALLSSAALRLQDQ
Ga0307412_112519101	3300031911	Rhizosphere	MSFEYLPIMAQAGAPKPPRVLVLPSKQAWSPITKAVKQSTIALL
Ga0214473_110055642	3300031949	Soil	MPLDYLPIMARNSAPKPPRVLAAPSKPSWCAITKPLERSRVALLTSAALRL
Ga0326597_103270361	3300031965	Soil	MPFEYLPIMARNSAPKPPRVLATLSNPSWCPITKPLNRSRVALLTSAALRLAHQQPFI
Ga0307414_122582021	3300032004	Rhizosphere	MPFQYLPVMAQNSAPKPPRMLVAPSKPAWCPIKKPLNESRIALVSSAALRLAHQEPFIPREDFGYRRVSS
Ga0310902_110733381	3300032012	Soil	MPLEYLPIMAQNSAPKPPRVLVSPSKPAWCPITKPVNQSRIALLSSAALRLAHQNP
Ga0315910_110312231	3300032144	Soil	MPFQYLPVMAQNSAPKPPRMLVSPSKPTWCPIKKPLNESRIALVSSAALRLAHQEPF
Ga0315910_111551752	3300032144	Soil	MPFEYLPLMARNSAPKPARVLVTPSAPAWCPVTKPLDRSRIALVSSAALRLASQQPFTPRADLSYRRV
Ga0307470_119217381	3300032174	Hardwood Forest Soil	MALEYLPIMAQSSPAKPPRVLVEPSNRSWCTVKKPVNQSRVALLTSAALRLNRQEP
Ga0335077_117639602	3300033158	Soil	MALEYLPIMARSGAPKPPRVLVSPSKPSWCAVAKPAHLSRVALLSSAALRLAHQTPFVPKEDLSYRLVPSDPAA
Ga0316604_105440831	3300033406	Soil	MPFQYLPVMAQNSAPKPPRVLITPSKPAWCPISKPLSQSRVALLSSAALRLAHQEPFIPREDFGYRR
Ga0214472_101141741	3300033407	Soil	MPFEYLPIMAANGAPKPPRRLVAPSKPAWCPVKKPLHESRVALLSSAALRLTNQEPFIPREDLSYRRVPSD
Ga0247829_115479962	3300033550	Soil	MSFEYLPVMAQAGAPKPPRVLVPPSKQAWSPITKPVNQSTIALLSS
Ga0364935_0054290_1012_1173	3300034151	Sediment	MPFEYLPVMEKNSAPKPPRVLAAPSKPAWQAAIKAVNRSRVALLSSAALRLDQQ
Ga0364943_0127438_2_223	3300034354	Sediment	MPFQYLPVMAQNSAPKPPRVLVSPTKTAWCPTKKPLSESRVALLSSAALRLADQEPFIPREDFNYRRVPSDPSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059221

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences