Metagenome / Metatranscriptome Family F059090

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059090
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	62 residues
Representative Sequence	MTPVKGGYAVDVPTINVSERARREHASVWSTFRAFAVTLRRLFTSLFKGDMPTIYYPEQTRPYSER
Number of Associated Samples	110
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.76 %
% of genes from short scaffolds (< 2000 bps)	94.78 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.254 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (11.194 % of family members)
Environment Ontology (ENVO)	Unclassified (27.612 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.015 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.04% β-sheet: 0.00% Coil/Unstructured: 65.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00384	Molybdopterin	79.85
PF13510	Fer2_4	5.97
PF04879	Molybdop_Fe4S4	5.22
PF00581	Rhodanese	1.49
PF10588	NADH-G_4Fe-4S_3	1.49
PF00933	Glyco_hydro_3	0.75
PF09822	ABC_transp_aux	0.75
PF00037	Fer4	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	90.30 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	51.49 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.49 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.49 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.49 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.49 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.49 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.49 %
Chthoniobacter flavus Ellin428	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	0.75 %
Unclassified	root	N/A	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_103482636	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300004009\|Ga0055437_10021626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1509	Open in IMG/M
3300004268\|Ga0066398_10193323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300004463\|Ga0063356_104343784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300004643\|Ga0062591_102320320	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300005166\|Ga0066674_10105707	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300005166\|Ga0066674_10161456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300005330\|Ga0070690_101658085	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300005330\|Ga0070690_101791446	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300005332\|Ga0066388_104943723	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005332\|Ga0066388_107613852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300005356\|Ga0070674_100699938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300005446\|Ga0066686_10249990	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197	Open in IMG/M
3300005447\|Ga0066689_10276113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300005447\|Ga0066689_10995407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300005456\|Ga0070678_100348227	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300005457\|Ga0070662_101790911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005468\|Ga0070707_100038757	All Organisms → cellular organisms → Bacteria	4553	Open in IMG/M
3300005468\|Ga0070707_101272726	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300005535\|Ga0070684_100872983	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300005540\|Ga0066697_10096563	All Organisms → cellular organisms → Bacteria → Acidobacteria	1719	Open in IMG/M
3300005553\|Ga0066695_10261260	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005561\|Ga0066699_11118020	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300005564\|Ga0070664_100829585	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300005764\|Ga0066903_101608373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1233	Open in IMG/M
3300005842\|Ga0068858_100545026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1123	Open in IMG/M
3300006237\|Ga0097621_100192935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1765	Open in IMG/M
3300006237\|Ga0097621_100917772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300006358\|Ga0068871_101130885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300006755\|Ga0079222_11152517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300006796\|Ga0066665_10857728	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300006797\|Ga0066659_11644238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300006800\|Ga0066660_11276722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300006852\|Ga0075433_10558841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300006853\|Ga0075420_100763447	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300006854\|Ga0075425_101212440	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300006904\|Ga0075424_100131136	All Organisms → cellular organisms → Bacteria	2652	Open in IMG/M
3300007004\|Ga0079218_11922705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300007004\|Ga0079218_13866984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300007076\|Ga0075435_101733590	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300009100\|Ga0075418_10547599	All Organisms → cellular organisms → Bacteria → Acidobacteria	1243	Open in IMG/M
3300009100\|Ga0075418_11798105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300009100\|Ga0075418_12000187	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300009147\|Ga0114129_12302227	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300009176\|Ga0105242_10894995	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300009176\|Ga0105242_11355657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300010047\|Ga0126382_11628264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300010086\|Ga0127496_1090145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300010303\|Ga0134082_10324095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300010304\|Ga0134088_10437661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300010322\|Ga0134084_10270775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300010323\|Ga0134086_10415103	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300010333\|Ga0134080_10280128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300010337\|Ga0134062_10109333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300010359\|Ga0126376_11316078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300010359\|Ga0126376_13113042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300010362\|Ga0126377_10666492	All Organisms → cellular organisms → Bacteria → Acidobacteria	1090	Open in IMG/M
3300010366\|Ga0126379_13484285	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300010397\|Ga0134124_10816002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300010397\|Ga0134124_12761392	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300010399\|Ga0134127_12602590	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300010401\|Ga0134121_12092856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300011119\|Ga0105246_11511027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300012038\|Ga0137431_1037769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1319	Open in IMG/M
3300012173\|Ga0137327_1035110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300012206\|Ga0137380_11021833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300012212\|Ga0150985_100994597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300012212\|Ga0150985_101724993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1315	Open in IMG/M
3300012212\|Ga0150985_122654611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300012356\|Ga0137371_10790097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300012359\|Ga0137385_10940957	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300012386\|Ga0134046_1144632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300012390\|Ga0134054_1188898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300012406\|Ga0134053_1160988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300012469\|Ga0150984_109656009	All Organisms → cellular organisms → Bacteria → Acidobacteria	1015	Open in IMG/M
3300012582\|Ga0137358_10651618	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300012883\|Ga0157281_1114028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012904\|Ga0157282_10390130	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300012916\|Ga0157310_10490178	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300012918\|Ga0137396_11170393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300012923\|Ga0137359_10501123	All Organisms → cellular organisms → Bacteria → Acidobacteria	1071	Open in IMG/M
3300012929\|Ga0137404_10602392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300012972\|Ga0134077_10151402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300012972\|Ga0134077_10183448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300013297\|Ga0157378_11258493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	780	Open in IMG/M
3300013308\|Ga0157375_10335174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1678	Open in IMG/M
3300013308\|Ga0157375_11065902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300013308\|Ga0157375_11127271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300013308\|Ga0157375_13443639	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300014154\|Ga0134075_10526990	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300014969\|Ga0157376_11354766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300015359\|Ga0134085_10003476	All Organisms → cellular organisms → Bacteria	5656	Open in IMG/M
3300015359\|Ga0134085_10305652	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300015371\|Ga0132258_12515711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300015372\|Ga0132256_102708401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300015373\|Ga0132257_101368670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300015373\|Ga0132257_104486253	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300015374\|Ga0132255_104635687	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300017792\|Ga0163161_11708068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300018431\|Ga0066655_10555077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300018431\|Ga0066655_11381023	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300018482\|Ga0066669_11373647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300019487\|Ga0187893_10185838	All Organisms → cellular organisms → Bacteria → Acidobacteria	1622	Open in IMG/M
3300019789\|Ga0137408_1207754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300021082\|Ga0210380_10025902	All Organisms → cellular organisms → Bacteria	2496	Open in IMG/M
3300021407\|Ga0210383_10230446	All Organisms → cellular organisms → Bacteria → Acidobacteria	1588	Open in IMG/M
3300025898\|Ga0207692_10637943	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300025921\|Ga0207652_10588227	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300025933\|Ga0207706_11075434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300025936\|Ga0207670_10910892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300025937\|Ga0207669_10529264	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300025940\|Ga0207691_10108542	All Organisms → cellular organisms → Bacteria	2470	Open in IMG/M
3300025940\|Ga0207691_11189209	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300025960\|Ga0207651_10018789	All Organisms → cellular organisms → Bacteria → Acidobacteria	4124	Open in IMG/M
3300026075\|Ga0207708_11560716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300026088\|Ga0207641_12111603	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300026089\|Ga0207648_10916580	Not Available	819	Open in IMG/M
3300026121\|Ga0207683_11993358	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300026296\|Ga0209235_1017611	All Organisms → cellular organisms → Bacteria	3862	Open in IMG/M
3300026343\|Ga0209159_1159602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300027182\|Ga0208952_1005799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300027886\|Ga0209486_10441084	All Organisms → cellular organisms → Bacteria → Acidobacteria	798	Open in IMG/M
3300027886\|Ga0209486_10859305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300031547\|Ga0310887_10162695	All Organisms → cellular organisms → Bacteria → Acidobacteria	1181	Open in IMG/M
3300031547\|Ga0310887_11015230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300031802\|Ga0310123_10568292	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300031820\|Ga0307473_10278675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300031879\|Ga0306919_10665804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300031945\|Ga0310913_10528170	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300031947\|Ga0310909_10613935	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300032000\|Ga0310903_10034743	All Organisms → cellular organisms → Bacteria → Acidobacteria	1834	Open in IMG/M
3300032003\|Ga0310897_10025141	All Organisms → cellular organisms → Bacteria → Acidobacteria	1954	Open in IMG/M
3300032012\|Ga0310902_10936183	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300032013\|Ga0310906_10712340	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.42%
Host-Associated	Host-Associated	33.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.69%
Plants	Host-Associated → Plants	33.58%
Aquatic	Environmental → Aquatic	3.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.45%
Roots	Host-Associated → Plants → Roots	2.24%
Marine	Environmental → Aquatic → Marine	1.49%
Sediment	Environmental → Aquatic → Sediment	1.49%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Cave	Environmental → Terrestrial → Cave	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.43%
Loam	Environmental → Terrestrial → Soil → Loam	10.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.49%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.24%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.24%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.24%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.49%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Bulk Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010086	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300027182	Bulk soil microbial communities from Harvard Forest, USA - 3Bulk_unsorted metaG (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1034826361	3300000559	Soil	MTPVRGGYAVDVPTINVSDRARQENATIWSTFKAFGVTLRRLFTSLVKRDIPTISYPEQQRNYSERFRG
Ga0055437_100216262	3300004009	Natural And Restored Wetlands	MTPVRGGYAVDVPTINVSERARGENATIWSTFKAFGVTLRRLFNSLVKRDIPTVSYPEQQRNYSERF
Ga0066398_101933231	3300004268	Tropical Forest Soil	MTPVKGGYAVDVPVINVSERARREHASVWTTFRAFAVTIRHLFTSLFKGDTPTIYY
Ga0063356_1043437841	3300004463	Arabidopsis Thaliana Rhizosphere	MTPVRGGYAVDVPTINVSERARSEGATIWSTFKAFGVTLRRLFTSLVKRDMPTISYPEQQRNYSER
Ga0062591_1023203201	3300004643	Soil	VIPVKGGYAVDVPVINVSERARREHASIWSTFKAFTVTLNHLFMSLFKGDTPTIYYPEE
Ga0066674_101057071	3300005166	Soil	MTPVSGGYAVDVPTINVSDSARREHATVWSTFRAFAVTLRRFFTSLFKGDIPTINYPEQSRPYSERFRGTHILTV
Ga0066674_101614561	3300005166	Soil	MTPVSGGYAVDVPIINVSDRARREHATVWSTFRAFGVTLRRFFTSLFKGDIPTINYPEQSRPYSERFRGTHILTV
Ga0070690_1016580851	3300005330	Switchgrass Rhizosphere	MTPVKGGYAVDVPVVNVSERARRENASVLSTFKAFGVTFRRMFTSLFKGDMPTISYPEE*
Ga0070690_1017914462	3300005330	Switchgrass Rhizosphere	MTPVKGGYAVDVPTINVSDRARQEHATVWSTLRAFGVTLRRLFTSFVKRDMPTISYPEQQRIYSERFRGTHILTTRE
Ga0066388_1049437231	3300005332	Tropical Forest Soil	MTPVKGGWAVDVPTINVSEKARREHATVWSTFRAFTVTLRHLFKSLFKGDTPTIYYPEQTRPYSERFRGTH
Ga0066388_1076138522	3300005332	Tropical Forest Soil	MTPVKGGYAVDVPVINVSERARREHASVWSTFKAFAVTLHHLFKSLFKGDTPTIYYPEQTRPYSERF
Ga0070674_1006999382	3300005356	Miscanthus Rhizosphere	MTPVRGGYAVDVPTINVSERARREGATVFSTFKAFGVTLRRLFTSLVKRDMPTISYPE
Ga0066686_102499901	3300005446	Soil	MTPVKGGYAVDVPVIHVSERARQEHATVWSTFKAFGVTLRRLFTSLFKGDTPTIYYPEQTRPY
Ga0066689_102761131	3300005447	Soil	MTPVRGGYAVEVPTINVSERARREHATVWATFGAFAVTLRRLFTSLFKGDIPTINYPEESRPY
Ga0066689_109954071	3300005447	Soil	MTPVKGGYAVDVPVINVTDRARREHATVWSTFLAFAVTLRRLFTSLFRGDTPTIYYPEQTRPYS
Ga0070678_1003482272	3300005456	Miscanthus Rhizosphere	MTPVKGGYAVDVPVINVSERARREQATIWSTFRAFGVTFSRLFTSLIKRDMPTISYPEQTRNYSERFRGTHIL
Ga0070662_1017909112	3300005457	Corn Rhizosphere	MIPVKGGYAVDVPVINVSERARREQATFWSTFKAFGVTFSRLFTSLIKRDMPTISYPEQT
Ga0070707_1000387575	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTPVKGGYAVDVPTINVSERARRENATIWSTFRAFSVTLRRLFTSLFKGDIPTINYPEQTRPY
Ga0070707_1012727261	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTPVKGGYAVDVPTINVSERARREHATIWSTFRAFGVTLRRLFTSLFK
Ga0070684_1008729832	3300005535	Corn Rhizosphere	MIPVKGGYAVDVPTINVSERARREHATVWSTFRAFAVTIRHLFTSLFKGDSPTIYYPEQSRPY
Ga0066697_100965631	3300005540	Soil	MTPVSGGYAVDVPTINVSERARGEHATIWSTFRAFAVTLRRLFTSLFKGDIPTIN
Ga0066695_102612601	3300005553	Soil	MTPSSGGYAVDVPIINVSDRARREHATVWSTFRAFGVTLRRFFTSLFKGDIPTINYPEQSRPYSERFRGTHILTV
Ga0066699_111180202	3300005561	Soil	MTPVKGGYAVDVPTINVSERARREHATVWSTFRAFSVTLRRLFTSLFKGDIPTINYPEQTRPYSERFRGTHIL
Ga0070664_1008295852	3300005564	Corn Rhizosphere	MTPVRGGYAVDVPTINVSERARSEHATIWSTFRAFGVTLRRLFTSLVKRDMPTISYPEQQRNYSDR
Ga0066903_1016083732	3300005764	Tropical Forest Soil	MTPVKGGWAVDVPTINVSERARREHATVWSTFRAFAVTLRHLFKSLFKGDTPTIYYPE
Ga0068858_1005450261	3300005842	Switchgrass Rhizosphere	MIPVKGGYAVDVPVINVSERARREQATFWSTFKAFGVTFSRLFTSLIKRDMPTISYPEQTRNYSE
Ga0097621_1001929351	3300006237	Miscanthus Rhizosphere	MIPVKGGYAVDVPVINVSERARREQATFWSTFKAFGVTFSRLFTSLVKRDMPTISYPEQTRNYSERF
Ga0097621_1009177722	3300006237	Miscanthus Rhizosphere	MIPVKGGYAVDVPVINVSERARREQATIWSTFRAFGVTFSRLFTSLVKRDMPTISYPEQTRNYSERFR
Ga0068871_1011308851	3300006358	Miscanthus Rhizosphere	MIPVKGGYAVDVPIINVSERARREQATFWSTFKAFGVTFSRLFTSLIKR
Ga0079222_111525171	3300006755	Agricultural Soil	MTPVKGGYAVDVPTINVSERARREHASVWSTFRAFAVTLRRLFTSLFKGDMPTIYYPEQTRPYSER
Ga0066665_108577281	3300006796	Soil	MTPVKGGYAVEVPVINVSERARREHATVWSTFLAFGVTLRRLFTSLIQRDTPTIYYPEQTRPYSERF
Ga0066659_116442381	3300006797	Soil	MTPVKDGYAVDVSTINVSERARREHASVWSTFRAFAVTLRRLFTSLIKGDIPT
Ga0066660_112767221	3300006800	Soil	MTPVKGGYAVDVPTVNVSERARREHASIWSTFRAFAVTLRRLFTSLIKGDIPTIYYPEQTRPYSERFR
Ga0075433_105588412	3300006852	Populus Rhizosphere	MTPVKGGYAVDVPVINVSERARRERASVWTTFRAFAVTLRHLFMSLFKGDTPTIYYPEQSRP
Ga0075420_1007634471	3300006853	Populus Rhizosphere	MTPVKGGYAVDVPVINVSERARQERASVWSTFRAFAVTLRRLFTSLFRGDT
Ga0075425_1012124401	3300006854	Populus Rhizosphere	MTPVKGGYAVDVPVINVSQRARQEHASVWSTFRAFAVTLRRLFTSLFKGDTPTIYYPEQTRPYSERFRGTH
Ga0075424_1001311363	3300006904	Populus Rhizosphere	MTPVKGGYAVDVPVINVSQRARQEHASVWSTFRAFAVTLRRLFTSLFKGDTPTIYYP
Ga0079218_119227052	3300007004	Agricultural Soil	MSGANASPVGRSHQGMTPVRGGYAVDVPTINVSERARQENATLWTTFRAFGVTFRRLFTSLIKRDMPTI
Ga0079218_138669842	3300007004	Agricultural Soil	MTPVRGGYAVDVPVINVSERARRERASIWSTFLAFAVTLRRLFTSLFKGDTPTIYYPEQS
Ga0075435_1017335901	3300007076	Populus Rhizosphere	MTPVKGGYAVDVPVINVSQRARQEHASVWSTFRAFAVTLRRLFTSLFKGD
Ga0075418_105475991	3300009100	Populus Rhizosphere	MTPVKGGYAVDVPVINVSERARRENASVLSTFKAFGVTFRRMITSVFKGDMPTIS
Ga0075418_117981051	3300009100	Populus Rhizosphere	MTPVKGGYAVDVPVINVSERARRERASVWTTFRAFAVTVRHLFMSLFKGDTPTIYYPEQSRPY
Ga0075418_120001871	3300009100	Populus Rhizosphere	MTPVKGGYAVDVPTINVSERARREHASVWSTFLAFAVTLRRLFTSLFKGDTPTIYYPEQTRPYSERFR
Ga0114129_123022272	3300009147	Populus Rhizosphere	MTPVKGGYAVDVPVINVSERARRENASVLSTFKAFGVTFRRMLTSVFKGDMPTI
Ga0105242_108949951	3300009176	Miscanthus Rhizosphere	MTPVKGGYAVDVPVVNVSERARKERASILGTFKAFAVTLRHLFTSLFKGDSPTIYYPEQSRPYSER
Ga0105242_113556572	3300009176	Miscanthus Rhizosphere	MTPVKGGWAVDVPVVNVSERARRENATIWSTFYAFAVTLRRLFTSLFKGDTPTIYY
Ga0126382_116282642	3300010047	Tropical Forest Soil	MNPVKGGYAVDVPVINVSERARREHASVWSTFRAFAVTLRHLFMSLFKGDTPTIYYP
Ga0127496_10901452	3300010086	Grasslands Soil	MTPVSGGYAVDVPTINVSDSARREHATVWSTFGAFAVTLRRFFTSLFKGDIPTINYPEQSRPYSE
Ga0134082_103240952	3300010303	Grasslands Soil	MTPVSGGYAVDVPTINVSERARGEHATIWSTFRAFAVTLRRLFTSLFKGDIPTINYPEESRPYS
Ga0134088_104376612	3300010304	Grasslands Soil	MTPAKGGYAVDVPVINVSARARQEHATVWSTFKAFAVTLRRLFTSLFKGDTPT
Ga0134084_102707751	3300010322	Grasslands Soil	MTPVSGGYAVDVPTINVSDRARRENATVWSTFRAFAVTLRRFFTSLFKGDIPTINYPEQSRPYSERFR
Ga0134086_104151031	3300010323	Grasslands Soil	MTPVKGGYAVDVPVIHVSERARQEHATVWSTFKAFGVTLRRLFTSLFKGDTPTIYYPEQTRPYSER
Ga0134080_102801282	3300010333	Grasslands Soil	MTPVSGGYAVDVPTINVSDRARRENATVWSTFRAFGVTLRRFFTSLFKGDIP
Ga0134062_101093331	3300010337	Grasslands Soil	MTPVSGGYAVDVPTINVSDSARREHATVWSTFRAFAVTLRRFFTSLFKGDIPTIN
Ga0126376_113160781	3300010359	Tropical Forest Soil	MKPVKGGYAVDVPVINVSERARKEHSSFWSTFKAFGVTFSRLFTSLIKRDMPTISYPEQTRNYSERFRGTHI
Ga0126376_131130422	3300010359	Tropical Forest Soil	MTPVKGGYAVDVPVINVSERARREHASVWTTFRAFAVTLKHLFMSLFKGDTPTIYYPEQSRPYSERFRGTH
Ga0126377_106664921	3300010362	Tropical Forest Soil	MSGTPVKGGYAVDVPIINVSERARREHATVWSTFKAFAVTLRRLFTSLFKGDTPTIYYPEQTRPYSERFRGTH
Ga0126379_134842852	3300010366	Tropical Forest Soil	MTPVRGGYAVDVPVVNVSERARRENATVWSTFRAFGVTLRRLLLTVFKGDIPTVS
Ga0134124_108160021	3300010397	Terrestrial Soil	MIPVKGGYAVDVPVINVSERARREHATFWSTFKAFGVTFSRLFTSLIKRDMPTISYPEQTRN
Ga0134124_127613922	3300010397	Terrestrial Soil	MTPVKGGYAVDVPTINVSERARQENATIWSTFRAFAVTLRRLFTSLFKGDTPTIYYPEQTRPYSERFR
Ga0134127_126025901	3300010399	Terrestrial Soil	MTPVKGGYAVDVPVVNVSERARREHASVWSTFKAFAVTLHHLFKSLFRGDTPTIYYPEQ
Ga0134121_120928561	3300010401	Terrestrial Soil	MKPVKGGYAVDVPVINVSERARKEHATFWSTFKAFGVTFSRLFTSLIKRDMPTISYPEQTRNY
Ga0105246_115110272	3300011119	Miscanthus Rhizosphere	MMPVKGGYAVDVPVINVSERARKEHSSFWSTFRAFGVTFSRLFTSLIKRDMPTISYPEQSRNYSERFR
Ga0137431_10377691	3300012038	Soil	MTPVRGGYAVDVPVINVSERARQERASIWSTFLAFAVTLRRLFTSLFKGDTPTIYYPEQS
Ga0137327_10351102	3300012173	Soil	MTPVKGGYAVDVPVINVSERARSERASIWSTFLAFAVTLRRLFTSLFKGDTPTIYYPEQSRPYSER
Ga0137380_110218331	3300012206	Vadose Zone Soil	MTPVSGGYAVDVPTINVSDRARREHATVWSTFGAFAVTLRRFFTSLFKGDIPTIN
Ga0150985_1009945972	3300012212	Avena Fatua Rhizosphere	MTPVKGGYAVDVPVINVSERARRENPTIWSTFHAFAVTLRRLFTSLFKGDTPT
Ga0150985_1017249931	3300012212	Avena Fatua Rhizosphere	MIPVKGGGYAVDVPVINVSERARREQSTFWSTFKAFGVTFSRLFTSLIKRDMPTISYPEQTRN
Ga0150985_1226546112	3300012212	Avena Fatua Rhizosphere	MIPVKGGGYAVDVPVINVSERARREQATFWSTFKAFGVTFSRLFTSLIKR
Ga0137371_107900971	3300012356	Vadose Zone Soil	MTPVSGGYAVDVPIINVSDRARREHATVWSTFRAFGVTLRRFFTSLFKGDIPTINYPEQS
Ga0137385_109409572	3300012359	Vadose Zone Soil	MTPVKGGYAVDVPVIHVSERARQERATVWSTFKAFGVTLRRLFTSLFKGDTPTIYYPEQTRPYS*
Ga0134046_11446322	3300012386	Grasslands Soil	MTPVSGGYAVDVPTINVSDRARRENATVWSTFRAFGVTLRRFYTSLFKGDIPT
Ga0134054_11888981	3300012390	Grasslands Soil	MTPVPGGYAVDVPTINVGERARREHATVWSTFRAFAVTLRRLFTSLFKGDIPTINYPEESRPY
Ga0134053_11609882	3300012406	Grasslands Soil	MTPVPGGYAVDVPTINVGERARREHATVWSTFRAFAVTLRRLFTSLFKGDI
Ga0150984_1096560092	3300012469	Avena Fatua Rhizosphere	MIPVKGGYAVDVPTINVSERARKEHATIWSTFRAFGVTLRHLFMSLFKGDTPTIYYPEQTRPYSERFRG
Ga0137358_106516182	3300012582	Vadose Zone Soil	MPVKGGYAVDVPTINVSERARREHASVWSTFRAFGVTIRRLFTSLFKG
Ga0157281_11140282	3300012883	Soil	MTPVRGGYAVDVPTINVSERARAEQATIWSTFKAFGVTLRRLFTSLVKRDMPTISYPEQQRNYSERFRGTHILTV
Ga0157282_103901301	3300012904	Soil	MTPVRGGYAVDVPTINVSERARAEQATIWSTFKAFGVTLRRLFTSLVKRDMPTISYPEQQRNY
Ga0157310_104901782	3300012916	Soil	MIPVKGGYAVDVPVINVSERARRENATFWSTFKAFGVTFSRLFTSLIKRDMPTISYPE
Ga0137396_111703932	3300012918	Vadose Zone Soil	MTPVKGGYAVDVPTINVSERARREYAGVWSTFQAFAVTLRRLFTSLFKGDMPTIYYPEQTRPYSDRFRGTHILTVR
Ga0137359_105011231	3300012923	Vadose Zone Soil	MTPAKGGYAVDVAVINVSERARREHANFWSTFRAFAVTLRHLFTSLFKGDTPTIYYPEQTRPYSERF
Ga0137404_106023922	3300012929	Vadose Zone Soil	MTPVKGGYAVDVPVINVTDRARREHATVWSTFLAFAVTLRRLFTSLFRGDTPTIY
Ga0134077_101514022	3300012972	Grasslands Soil	MTPVSGGYAVDVPTINVSDRARREHATVWSTFRAFAVTLRRFFTSLFKGDIPTINYPEQSRPYSERFRG
Ga0134077_101834481	3300012972	Grasslands Soil	MTPVPGGYAVDVPTINVGERARREHATVWSTFRAFAVTLRRLFTSLFKGDIPTINYPEE
Ga0157378_112584932	3300013297	Miscanthus Rhizosphere	MTPVRGGYAVDVPTINVSERARAEHATIWSTFKAFGVTLRRLFTSLVKRDMPTISYP
Ga0157375_103351741	3300013308	Miscanthus Rhizosphere	MTPVRGGYAVDVPTVNVSERARSEQATVLSTFRAFGVTLRRLFTSLVKRDMPTISYPEQQRNYSERFR
Ga0157375_110659022	3300013308	Miscanthus Rhizosphere	MTPVRGGYAVDVPTINVSERARREGATVLSTFRAFGVTLRRLFTSLVKRDMPTISYPEQQRNYSERFRGTHILT
Ga0157375_111272712	3300013308	Miscanthus Rhizosphere	MIQVKGGYAVDVPVINVSERARREHATFWSTFKAFDVTFSRLFTSLIKRDMPTI
Ga0157375_134436391	3300013308	Miscanthus Rhizosphere	MTPVKGGYAVDVPVVNVSERARKERASILGTFKAFAVTLRHLFTSLFK
Ga0134075_105269901	3300014154	Grasslands Soil	MTPVKGGYAVEVPVINVSERARREHATVWSTFLAFGVTLRRLFTSLIKRDMPTI
Ga0157376_113547662	3300014969	Miscanthus Rhizosphere	MTPVKGGYAVDVPVINVSERARKEHSSFWSTFKAFGVTFSRLFTSLIKRDMPTISYPVQTRNYSERFRGTHILTV
Ga0134085_100034761	3300015359	Grasslands Soil	MTPVSGGYAVDVPTINVSDSARREHATVWSTFRAFAVTLRRFFTSLFKGDIPTINYPEQS
Ga0134085_103056522	3300015359	Grasslands Soil	MTPAKGGYAVDVPVMNVSQKARQEHATVWSTFRAFAVTLRRLFTSLFKGDTPTIYYPE
Ga0132258_125157111	3300015371	Arabidopsis Rhizosphere	MNSGSTVGAVSDRPVRGYAVDVPIVNVSERARREHATVWSTFKAFGVTLRRLFTSLFKGDIPTISYPEKQRNYSERFRGTHI
Ga0132256_1027084011	3300015372	Arabidopsis Rhizosphere	MNSGSTVGAVSDRPVRGYAVDVPIVNVSERARREHATVWSTFKAFGVTLRRLFTSLFKGDIPTISYPEKQRNYSERFRGTHILTVRDD
Ga0132257_1013686701	3300015373	Arabidopsis Rhizosphere	MNSGSTVGAVSDRPVRGYAVDVPIVNVSERARREHATVWSTFKAFGVTLRRLFTSLFKGDIPTISYPEKQRNYSERF
Ga0132257_1044862532	3300015373	Arabidopsis Rhizosphere	MTPVKGGYAVDVPVINVSAQARRENATVWSTLRGFAVTLRHLFTSLFKGDTPTIYYPEQ
Ga0132255_1046356872	3300015374	Arabidopsis Rhizosphere	MTAVKGGYAVDVPVINVSERARREHASVWSTFKAFGVTLHHLFKSLFKGDTPTIYYPEQTRPYSE
Ga0163161_117080682	3300017792	Switchgrass Rhizosphere	MIPVKGGYAVDVPVINVSERARREQATFWSTFKAFGVTFSRLFTSLIKR
Ga0066655_105550771	3300018431	Grasslands Soil	MTPVSGGYAVDVPTINVSDRARREHASVWSTFRAFAVTLRRFFASLFKGDIPTINYP
Ga0066655_113810232	3300018431	Grasslands Soil	MTPAKGGYAVDVPVMNVSQKARQEHATVWSTFRAFAVTLRRLFTSLFKGDTPTI
Ga0066669_113736472	3300018482	Grasslands Soil	MTPSSGGYAVDVPIINVSDRARQEHATVWSTFRAFGVTLRRFFTSLFKGDIPTINYPEQSRPYSERFRG
Ga0187893_101858381	3300019487	Microbial Mat On Rocks	MMPVKGGYAVDVPVVNVSERARREHATVWSTFKAFGVTLRRLFTSLVKGDMPTINY
Ga0137408_12077541	3300019789	Vadose Zone Soil	MTPVKGGYAVDVPVINVTDRARREHATVWSTFLAFAVTLRRLFTSLFRGDTPTIYYP
Ga0210380_100259023	3300021082	Groundwater Sediment	MIPVKGGYAVDVPVINVSERARREHATFWSTFRAFGVTFSRLFTSLIKRDMPTISYPEQTRNYSERFRGT
Ga0210383_102304461	3300021407	Soil	MTPVKGGWAVDVPTINVSERARREHATVWSTFRAFSVTLRHLFKSLFKGDTPTIYYPEETRPYSERFRGTHIL
Ga0207692_106379431	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTPVKGGWAVDVPTINVSERARREHATFWSTFRAFAVTLRHLFKSLFK
Ga0207652_105882272	3300025921	Corn Rhizosphere	MIPVKGGYAVDVPTINVSERARREHATVWSTFRAFAVTIRHLFTSLFKGDTPTIYYPEQTRPYSE
Ga0207706_110754342	3300025933	Corn Rhizosphere	MIPVKGGYAVDVPVINVSERARREQATFWSTFKAFGVTFSRLFTSLIKRDMPTISYPEQTRK
Ga0207670_109108921	3300025936	Switchgrass Rhizosphere	MTPVRGGYAVDVPTVNVSERARREGATVLSTFRAFGVTLRRLFTSLVKRDMPTISYPEQQRNYSERFRGTH
Ga0207669_105292642	3300025937	Miscanthus Rhizosphere	MTPVRGGYAVDVPTINVSERARREGATVFSTFKAFGVTLRRLFTSLVKRDMP
Ga0207691_101085421	3300025940	Miscanthus Rhizosphere	MTPVRGGYAVDVPTVNVSERARSEQATVLSTFRAFGVTLRRLFTSLVKRDM
Ga0207691_111892092	3300025940	Miscanthus Rhizosphere	MTPVRGGYAVDVPTINVSERARAEQATIWSTFKAFGVTLRRLFTSLVKRDMPTISYPEQQRNYSE
Ga0207651_100187895	3300025960	Switchgrass Rhizosphere	MTPVRGGYAVDVPTVNVSERARREGATVLSTFRAFGVTLRRLFTSLVKRDMPTISY
Ga0207708_115607162	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTPVRGGYAVDVPTINVSERARREGATVLSTFRAFGVTLRRLFTSLVKRDMPTISYPEQQ
Ga0207641_121116032	3300026088	Switchgrass Rhizosphere	MTPVKGGYAVDVPVINVSERARREQATIWSTFRAFGVTFSRLFTSLIKRDMPTISYPEQTRNYSER
Ga0207648_109165802	3300026089	Miscanthus Rhizosphere	MTPTKSGYAVDVPVINVSARARGEHASWWSTFTAFAVTLRHLFTSLFK
Ga0207683_119933582	3300026121	Miscanthus Rhizosphere	MTPVKGGYAVDVPVINVSERARREQATIWSTFRAFGVTFSRLFTSLIKRDMPTISYPEQTRNYSERFRGTHILTV
Ga0209235_10176115	3300026296	Grasslands Soil	MTPVSGGYAVDVPTINVSDSARREHATVWSTFRAFAVTLRRFFTSLFKGDIPTINYPEQSRP
Ga0209159_11596021	3300026343	Soil	MTPVSGGYAVDVPTINVSDSARREHATVWSTFRAFAVTLRRFFTSLFKGDIPT
Ga0208952_10057991	3300027182	Bulk Soil	MTPVRGGYAVDVPVINVSERARLENATVWSTFQAFAVTLRRLFTSLFKGDTPTINYPEQTRPYSERFRGTHI
Ga0209486_104410842	3300027886	Agricultural Soil	MKPVRGGYAVDVPTINVSERARSEHATVWSTFRAFGVTLRRLFASLVKRDMPTISY
Ga0209486_108593052	3300027886	Agricultural Soil	MSGANASPVGRSHQGMTPVRGGYAVDVPTINVSERARQENATLWTTFRAFGVTFRRLFTSLIKRDMPTISYPEQQR
Ga0310887_101626951	3300031547	Soil	MTPVRGGYAVDVPTINVSERARAEHATIWSTFKAFGVTLRRLFTSLIKRD
Ga0310887_110152302	3300031547	Soil	MTPVRDGYAVDVPTINVSERARREKATVLSTFRAFGVTLRRLFTSLVKRDMPTISYPEQQRNYSERF
Ga0310123_105682921	3300031802	Marine	MSGPYAGDLPVINVSEQARREPSSFLITFKAFGVTIGHLFRTLVKGDSPTISYPEQTRPYSE
Ga0307473_102786751	3300031820	Hardwood Forest Soil	LTPVQGGYAVDVPTINVSEIARREHASVWSTFRAFAVTLRRLFTSLFKGDIPTINYPEQTRPYSERFRGTHILT
Ga0306919_106658042	3300031879	Soil	MTPAKGGYAVDVPVVNVSERARREHATVFSTFLAFAVTLRRFFTSLFKGDIPTI
Ga0310913_105281702	3300031945	Soil	MIPVKGGYAVDVPVINVSERARREQATIWSTFKAFGVTFSRLFTSLIKRDMPTISYPEQTRNYS
Ga0310909_106139352	3300031947	Soil	MTPVKGGYAVDVPTINVSERARREHATVWSTFRAFAVTLSHLFKSLFKGDTPT
Ga0310903_100347432	3300032000	Soil	MTPVRGGYAVDVPTINVSERARAEHATIWSTFKAFGVTLRRLFTSLIKRDMPTISYPEQQ
Ga0310897_100251413	3300032003	Soil	MTPVRGGYAVDVPTINVSERARAEQATIWSTFKAFGVTLRRLFTSLVKRD
Ga0310902_109361831	3300032012	Soil	MTPVRGGYAVDVPTVNVSERARSEQATVLSTFRAFGVTLRRLFTSLVKRD
Ga0310906_107123402	3300032013	Soil	MTPVRGGYAVDVPTINVSERARAEHATIWSTFKAFGVTFRRLFTSLVKRDMPTISYPEQQRNYSERF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059090

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences