Metagenome / Metatranscriptome Family F059078

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059078
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	80 residues
Representative Sequence	EIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFDLRAEIRRADSMRRLVGAR
Number of Associated Samples	114
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.75 %
% of genes near scaffold ends (potentially truncated)	97.01 %
% of genes from short scaffolds (< 2000 bps)	94.78 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.254 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (7.463 % of family members)
Environment Ontology (ENVO)	Unclassified (34.328 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.522 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.95% β-sheet: 0.00% Coil/Unstructured: 39.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF13450	NAD_binding_8	80.60
PF01593	Amino_oxidase	11.19
PF01436	NHL	1.49
PF00535	Glycos_transf_2	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.73 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	79.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	79.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.24 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	79.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.24 %
Erwiniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Erwiniaceae	0.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	79.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.24 %
Pantoea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Erwiniaceae → Pantoea	0.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.75 %
Unclassified	root	N/A	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig108935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
2209111006\|2214737994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300000956\|JGI10216J12902_104739905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300001593\|JGI12635J15846_10310433	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300004114\|Ga0062593_101658208	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300004156\|Ga0062589_102526812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300004480\|Ga0062592_101554651	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300004633\|Ga0066395_10757463	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005332\|Ga0066388_100769549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1560	Open in IMG/M
3300005332\|Ga0066388_108689701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300005334\|Ga0068869_101934244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300005340\|Ga0070689_101171576	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005343\|Ga0070687_100182136	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005356\|Ga0070674_100108755	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300005440\|Ga0070705_100880159	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005445\|Ga0070708_101196955	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005466\|Ga0070685_10147902	All Organisms → cellular organisms → Bacteria → Proteobacteria	1486	Open in IMG/M
3300005467\|Ga0070706_100209516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1820	Open in IMG/M
3300005468\|Ga0070707_100397643	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300005468\|Ga0070707_101944164	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005468\|Ga0070707_102193961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005518\|Ga0070699_101779720	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005526\|Ga0073909_10428713	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	628	Open in IMG/M
3300005539\|Ga0068853_101275601	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005546\|Ga0070696_100609749	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300005546\|Ga0070696_101241692	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005578\|Ga0068854_101732208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300005617\|Ga0068859_100434664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1409	Open in IMG/M
3300005713\|Ga0066905_101863586	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005719\|Ga0068861_100500721	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1098	Open in IMG/M
3300005764\|Ga0066903_103064024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300005764\|Ga0066903_106152757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300005841\|Ga0068863_100137465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2334	Open in IMG/M
3300005841\|Ga0068863_101634426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300005842\|Ga0068858_100494090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300005842\|Ga0068858_101504598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300005843\|Ga0068860_100937083	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	883	Open in IMG/M
3300005995\|Ga0066790_10121990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300006031\|Ga0066651_10344391	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300006237\|Ga0097621_101759194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300006791\|Ga0066653_10093957	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300006806\|Ga0079220_11773161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300006852\|Ga0075433_10312340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1391	Open in IMG/M
3300006852\|Ga0075433_11312855	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	627	Open in IMG/M
3300006871\|Ga0075434_100395558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1403	Open in IMG/M
3300009088\|Ga0099830_10722139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300009093\|Ga0105240_11687867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300009098\|Ga0105245_12850516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300009098\|Ga0105245_13275643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300009137\|Ga0066709_100176801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2772	Open in IMG/M
3300009147\|Ga0114129_13397358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300009148\|Ga0105243_13098907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300009174\|Ga0105241_12104577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300009545\|Ga0105237_11638292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300009545\|Ga0105237_12119759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300009804\|Ga0105063_1075996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300010046\|Ga0126384_10773900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300010046\|Ga0126384_11620841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300010046\|Ga0126384_11948631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300010047\|Ga0126382_10427624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M
3300010361\|Ga0126378_12460801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300010391\|Ga0136847_11533984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300010398\|Ga0126383_10866764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300010398\|Ga0126383_11857853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300010400\|Ga0134122_10560169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300010401\|Ga0134121_10499630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300010880\|Ga0126350_11390267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300012210\|Ga0137378_10402867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1269	Open in IMG/M
3300012211\|Ga0137377_10480152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300012353\|Ga0137367_10574985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300012354\|Ga0137366_10393713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300012354\|Ga0137366_10729602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300012355\|Ga0137369_10050375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3648	Open in IMG/M
3300012355\|Ga0137369_10668660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300012358\|Ga0137368_10273543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300012360\|Ga0137375_10080180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3406	Open in IMG/M
3300012684\|Ga0136614_10548705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300012907\|Ga0157283_10408568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012931\|Ga0153915_12598827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300012957\|Ga0164303_10414037	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300012988\|Ga0164306_11960221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300012989\|Ga0164305_10215399	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300012989\|Ga0164305_11210482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300013102\|Ga0157371_11266895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300013296\|Ga0157374_12526256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Erwiniaceae → Pantoea	541	Open in IMG/M
3300014968\|Ga0157379_10488082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300015075\|Ga0167636_1020546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300015259\|Ga0180085_1061520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300015371\|Ga0132258_10797496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2381	Open in IMG/M
3300015372\|Ga0132256_102216672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300015374\|Ga0132255_101523376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300015374\|Ga0132255_102061376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300017947\|Ga0187785_10458164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300017973\|Ga0187780_11228093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300017974\|Ga0187777_10158314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1513	Open in IMG/M
3300018054\|Ga0184621_10101752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300018056\|Ga0184623_10487653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300020003\|Ga0193739_1114728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300022756\|Ga0222622_10340566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300023069\|Ga0247751_1039627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300025914\|Ga0207671_11020422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300025918\|Ga0207662_10392190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300025935\|Ga0207709_10139494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1664	Open in IMG/M
3300025949\|Ga0207667_10240442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1853	Open in IMG/M
3300025986\|Ga0207658_12013725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300026035\|Ga0207703_10175056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1890	Open in IMG/M
3300026323\|Ga0209472_1170532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300027526\|Ga0209968_1007764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1626	Open in IMG/M
3300027909\|Ga0209382_10793546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300031562\|Ga0310886_10616607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300031682\|Ga0318560_10189468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1097	Open in IMG/M
3300031740\|Ga0307468_100469893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300031740\|Ga0307468_101976545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300031748\|Ga0318492_10496453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300031820\|Ga0307473_10825166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300031821\|Ga0318567_10159140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300031912\|Ga0306921_12386599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300031944\|Ga0310884_10101676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1409	Open in IMG/M
3300031965\|Ga0326597_12134837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300032091\|Ga0318577_10484617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300032180\|Ga0307471_100515334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300032256\|Ga0315271_11773755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300032770\|Ga0335085_10393079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1612	Open in IMG/M
3300032770\|Ga0335085_12132497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300032782\|Ga0335082_10873385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300032783\|Ga0335079_11982910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300033407\|Ga0214472_10506846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1119	Open in IMG/M
3300033480\|Ga0316620_12545818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300033501\|Ga0326732_1048998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300033551\|Ga0247830_10788795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300033759\|Ga0314869_018689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300034178\|Ga0364934_0045198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1625	Open in IMG/M
3300034178\|Ga0364934_0358039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.64%
Host-Associated	Host-Associated	28.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.67%
Plants	Host-Associated → Plants	28.36%
Aquatic	Environmental → Aquatic	5.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.69%
Freshwater	Environmental → Aquatic → Freshwater	2.99%
Sediment	Environmental → Aquatic → Sediment	2.99%
Floodplain	Environmental → Terrestrial → Floodplain	1.49%
Peat	Environmental → Terrestrial → Peat	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.30%
Loam	Environmental → Terrestrial → Soil → Loam	14.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.24%
Lake	Environmental → Aquatic → Freshwater → Lake	1.49%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.75%
Ice	Environmental → Aquatic → Freshwater → Ice	0.75%
Sand	Environmental → Terrestrial → Soil → Sand	0.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.24%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.49%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.49%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.75%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.75%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.75%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Glacier Forefield Soils	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soils	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.75%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.75%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015075	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5C, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033501	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300033759	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_B	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_04092690	2124908032	Soil	AFRREVAQKLEIRHRINFVGDEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVFRYLFELREEIHRADALKRVVAPR
2213744571	2209111006	Arabidopsis Rhizosphere	VLSHWILGSPLHDINAGCRAFRGDIARRIEIKHRINFVGDEIYVRCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTILRVIRYLFDLRAEMRQAEALRRLTQKRKAK
JGI10216J12902_1047399052	3300000956	Soil	FVGDEIYARCRIAGWTVAEVIVRHFPREAGKSIHRPFKMLGTILRVIRYLFDLRSEMKHSEALRRLVAKKTT*
JGI12635J15846_103104332	3300001593	Forest Soil	RREVAHKLEIRHRINFVGDEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVFRYLFELRKEIHRADALKRVVASR*
Ga0062593_1016582081	3300004114	Soil	RINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTVSRVMRYLFELRGEIHRSDSLKRVVGAG*
Ga0062589_1025268121	3300004156	Soil	RIEIKHRINFVGDEIYARCRIAGWKVAEVIVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRREMKNAEALRRLAVKAR*
Ga0062592_1015546512	3300004480	Soil	TLGSPLHDINGGCRAFRRDVARRLEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTVSRVMRYLFELRGEIHRSDSLKRVVGAG*
Ga0066395_107574632	3300004633	Tropical Forest Soil	FRRDVARRMEIRHRINFVGDEIYARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTIRRVIRYLFDLRSEIRRADALKRVVVNSR*
Ga0066678_102583071	3300005181	Soil	RIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTIARVLRYLFALREEIRRADALKRVVAAR
Ga0066388_1007695492	3300005332	Tropical Forest Soil	EIKHRINFVGDEIFVRCRIAGWKVDEVIVQHFPREAGQSIHRPFKMLGTIWRVIRYLFDLRSEMKQAESLKRLVRKKA*
Ga0066388_1086897012	3300005332	Tropical Forest Soil	FRKDVARRIEIKHRINFVGDEIYARCRIAGWTVAEVIVRHFPREAGKSIHRPFKMLGTIMRVIRYLFDLRAEMKQGEALRRLVATKKTT*
Ga0068869_1019342441	3300005334	Miscanthus Rhizosphere	IEIKHRINFVGDEIYARCRIAGWKVAEVIVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRREVKNAEALRRLAVKTR*
Ga0070689_1011715761	3300005340	Switchgrass Rhizosphere	EIKHRINFVGDEIFVRCRIAGWRVDEVVVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRSEMHQAESMRRLTESQKRKAP*
Ga0070687_1001821361	3300005343	Switchgrass Rhizosphere	VGDEIFVRCRIAGWRVDEVVVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRSEMHQAESMRRLTESQKRKAP*
Ga0070674_1001087554	3300005356	Miscanthus Rhizosphere	HWILGSPLHDINAGCRAFRGDIARRMEIKHRINFVGDEIFVRCRIAGWRVDEVVVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRSEMHQAESMRRLTESQKRKAP*
Ga0070705_1008801591	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GDEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVFRYLFELREEIRRADAMKRVVAAR*
Ga0070708_1011969552	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVFRYLFELREEIRRADALKRVVAAR*
Ga0070685_101479022	3300005466	Switchgrass Rhizosphere	HWILGSPLHDINAGCRAFRRDVARRIEIKHRINFVGDEIYTRCRIAGWKVAEVIVRHFPREAGASIHRPFKMAGTIMRVIRYLFDLRGEMKRADAMRRLAVKAR*
Ga0070706_1002095162	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RHRINFVGDEIFARCRIAGWKVTEVVVRHFPREAGQSIHRPFKMAGTILRVVRYLFDLRAEMRRAESLRHLVTRKAR*
Ga0070707_1003976432	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	NAGCRAFRRDVARRLEIKHRINFVGDEIFARCRIAGWRVAEVVVRHFPREAGQSIHRPWKMAGTIARVIRYLFNLREEIRRSDALRRVVAGTR*
Ga0070707_1019441642	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GDEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTITRVLRYLFELREEIRRADALKRVVAAR*
Ga0070707_1021939611	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPFKMAGTILRVIRYLFDLRAEMRRAESLRRLVTRKAR*
Ga0070699_1017797201	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RINFVGDEIFVRCRIAGWRVAEVIVRHFPREAGQSIHRPFKMAGTVARVIRYLLDLRTEMRQADAMHRLVQSRKAR*
Ga0073909_104287131	3300005526	Surface Soil	EIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFELRGEIKQADALKRVAAAR*
Ga0068853_1012756012	3300005539	Corn Rhizosphere	CRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFDLRAEIRRADSMRRLVGAR*
Ga0070696_1006097491	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ARCRIAGWKVSEVVVRHFPRDAGQSIHRPWKMLGTISRVLRYLFELREEIRRSDAMKRVVAAR*
Ga0070696_1012416922	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	INFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMVGTVTRVIRYLFDLRKEIRRAQALRRVAETR*
Ga0068854_1017322081	3300005578	Corn Rhizosphere	RIEIKHRINFVGDEIYARCRIAGWKVAEVIVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRREVKNAEALRRLAVKTR*
Ga0068859_1004346641	3300005617	Switchgrass Rhizosphere	RRIEIKHRINFVGDEIYARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRSEMRQAESLKRLVRKKA*
Ga0066905_1018635862	3300005713	Tropical Forest Soil	RIEIKHRINFVGDEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFELRGEIKQADAMKRIAAAR*
Ga0068861_1005007212	3300005719	Switchgrass Rhizosphere	FVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFDLRAEIRRADSMRRLVGAR*
Ga0066903_1030640241	3300005764	Tropical Forest Soil	RIEIRHRINFVGDEIFARCRIAGWKVCEVVVRHFPREAGQSIHRPLKMAGTIVRVIRYLFDLREEIARADALKRVVAAR*
Ga0066903_1061527572	3300005764	Tropical Forest Soil	GDEIFVRCRIAGWKVAEVVVQHFPREAGQSIHRPFKMLGTIWKVLKYLFALRAEMHQAERMRRLVAGRRAAS*
Ga0068863_1001374651	3300005841	Switchgrass Rhizosphere	GDEIYARCRIAGWKVDEVVVQHFPREAGQSIHRPFKMLGTIFRVLRYLFDLRAEMNQSEALKRLTRKKK*
Ga0068863_1016344262	3300005841	Switchgrass Rhizosphere	GDEIYARCRIAGWKVDEVVVQHFPREAGQSIHRPFKMLGTIFRVLRYLFELRAEMNQSDALKRLVRKKR*
Ga0068858_1004940901	3300005842	Switchgrass Rhizosphere	RCRIAGWKVAEVIVRHFPREAGASIHRPFKMAGTIMRVIRYLFDLRGEMKRADAMRRLAVKAR*
Ga0068858_1015045981	3300005842	Switchgrass Rhizosphere	RIEIKHRINFVGDEIYARCRIAGWKVAEVIVRHFPREAGQSIHRPFKMLGTIMRVVRYLFDLRREMKNAEALRRLAVKAR*
Ga0068860_1009370832	3300005843	Switchgrass Rhizosphere	HRINFVGDEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVFRYLFELREEIRRADAMKRVVAAR*
Ga0066790_101219902	3300005995	Soil	DVARRIEIKHRINFVGDEIYARCRIAGWTVTEVVVRHFPREAGQSIHRPWKMLGTIRRVIRYLFDLREEMRRAERLRRLVRSRK*
Ga0066651_103443912	3300006031	Soil	LEIRHRINFVGDEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVFRYLFELREEIRRADAMKRVVAAR*
Ga0097621_1017591942	3300006237	Miscanthus Rhizosphere	HDINAGCRAFRGDIARRMEIKHRINFVGDEIFVRCRIAGWRVDEVVVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRSEMHQAESMRRLTESQKRKAP*
Ga0066653_100939571	3300006791	Soil	VARRIEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTISRVMRYLFELRGEIRRADAMRRLVGAR*
Ga0079220_117731611	3300006806	Agricultural Soil	EIFVRCRIAGWKVDEVIVRHFPREAGQSIHRAFKMLGPILRVIRYLFDLRSEMHQAESMRRLTESQKRKAQ*
Ga0075433_103123401	3300006852	Populus Rhizosphere	EIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFDLRAEIRRADSMRRLVGAR*
Ga0075433_113128552	3300006852	Populus Rhizosphere	EIRHRINFVGDEIFARCRIAGWNVAEVVVRHFPREAGQSIHRPFKMAGTILRVIRYLFDLRAEMRQAESMRRLVARKAR*
Ga0075434_1003955582	3300006871	Populus Rhizosphere	VGDEIFARCRIAGWRVSEVVVRHFPREAGQSIHRPWKMLGTIRRVIGYLFALREEMRRNEALKRVVAAR*
Ga0099830_107221392	3300009088	Vadose Zone Soil	RREVARRIEIKHRINFVGDEIFARCRIAGWRVAEVVVRHFPREAGQSIHRPWKMAGTIARVIRYLFNLREEIRRSDALRRMVAGTR*
Ga0105240_116878672	3300009093	Corn Rhizosphere	CRIAGWKVAEVIVRHFPREAGASIHKPFKMLGTILRVIRYLFDLRGEMKRAEAMRRIAVKAR*
Ga0105245_128505161	3300009098	Miscanthus Rhizosphere	LGLRVLSHWILGSPLHDINAGCRAFRRDVARRIEIKHRINFVGAEIFTRCRIAGWKVAEVIVRHFPREAGASIHRPFKMAGTIMRVIRYLFDLRGEMKRADAMRRLAVKAR*
Ga0105245_132756431	3300009098	Miscanthus Rhizosphere	KHRINFVGDEIYARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRSEMRQAESLKRLVRKKA*
Ga0066709_1001768014	3300009137	Grasslands Soil	CRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTIARVLRYLFALREEIRRADALKRVVAAR*
Ga0114129_133973582	3300009147	Populus Rhizosphere	HDINAGCRAFRAEAAQRIEIRHRINFVGDEIFARCRIAGWNVAEVVVRHFPREAGQSIHRPFKMAGTILRVIRYLFDLRAEMRQAESMRRLVARKAR*
Ga0105243_130989072	3300009148	Miscanthus Rhizosphere	GDEIYARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRSEMRQAESLKRLVRKKA*
Ga0105241_121045771	3300009174	Corn Rhizosphere	RDVARRLEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMVGTVSRVMRYLFELRGEIRRSDALKRVVGAG*
Ga0105237_116382922	3300009545	Corn Rhizosphere	RDIARRIEIKHRINFVGDEIFVRCRIAGWRVDEVVVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRSEMHQAESMRRLTESQKRKAP*
Ga0105237_121197592	3300009545	Corn Rhizosphere	LGSPLHDINAGCRAFRRDIARRLEIKHRINFVGDEIYARCRIAGWKVAEVIVRHFPREAGASIHKPFKMLGTILRVIRYLFDLRGEMKRAEAMRRIAVKAR*
Ga0105063_10759962	3300009804	Groundwater Sand	FRHDIARRIEIKHRINFVGDEIYARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTILRVLRYLFDLRGEIRQAEALKRLVKRKT*
Ga0126384_107739001	3300010046	Tropical Forest Soil	RIAGWKVAEVVVRHFPREAGASIHKPFKMLGTIMRVIRYLFDLRGEMKQAEALRRIAVKAR*
Ga0126384_116208412	3300010046	Tropical Forest Soil	AGWTVAEVVVRHFPRDAGKSIHRPFKMLGTIIRVIRYLFDLRAEMKQGEALRRLVANKKTT*
Ga0126384_119486311	3300010046	Tropical Forest Soil	IYARCRIAGWKVAEVVVQHFPREAGQSIHRPFKMLGTILRVIRYLFDLRSEMHQAERLRRLVTKRRPAQ*
Ga0126382_104276241	3300010047	Tropical Forest Soil	HGGCRAFRPDVARRLEIRHRINFVGDEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFELRGEIKQADAMKRIAAAR*
Ga0126378_124608012	3300010361	Tropical Forest Soil	IFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMIGTVARVIRYLFELRAEIRRSSATQGAPAGVR*
Ga0136847_115339842	3300010391	Freshwater Sediment	RLLLGSPLHDINGGCRAFRQAVARRIEIRHRINFVGDEIYARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMAGTIARVIRYLFDLREEMRRSEALKRVVAAR*
Ga0126383_108667642	3300010398	Tropical Forest Soil	DINGGCRAFRRDVARKLEIRHRINFVGDEIFARCRIAGWNVSEVVVRHFPREAGQSIHRPWKMLGTITRVLRYLFELREEIRRADAMKRVVAAR*
Ga0126383_118578532	3300010398	Tropical Forest Soil	ARRIEIKHRINFVGDEIFVRCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTILRVSRYLFDLRSEMHQAERLRKLVAKGRPAQ*
Ga0134122_105601692	3300010400	Terrestrial Soil	RIEIKHRINFVGDEIYARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRSEMRQAESLKRLVRKKA*
Ga0134121_104996302	3300010401	Terrestrial Soil	FVGDEIFVRCRIAGWRVDEVVVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRSEMHQAESMRRLTESQKRKAP*
Ga0126350_113902672	3300010880	Boreal Forest Soil	SPLHDINGGCRAFRRDVARRIEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMIGTIVRVVRYLFDLREEIARADALKRVVAAR*
Ga0137378_104028671	3300012210	Vadose Zone Soil	GGCRAFRRDVARRIEIKHRINFVGDEIFARCRIAGWRVAEVAVRHFPREAGQSIHRPWKMAGTIARVIRYLFNLREEIRRSDALRRVMAGTR*
Ga0137377_104801521	3300012211	Vadose Zone Soil	RIGGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFELRGEIRRADSMRRLVGAR
Ga0137367_105749851	3300012353	Vadose Zone Soil	RWILGSPLHDINGGCRAFRRDVARRIEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMAGTIARVIRYLFELREEIARAEALRRVVAAR*
Ga0137366_103937132	3300012354	Vadose Zone Soil	IFARCKIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTIRRVLRYLFELRAEMRRAEAIKRVVAAR*
Ga0137366_107296021	3300012354	Vadose Zone Soil	IFARCKIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFELRREIRRADSMRRLVGAR*
Ga0137369_100503751	3300012355	Vadose Zone Soil	DEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTIRRVVRYLFELRSEMRRAEAIKRVVAAR*
Ga0137369_106686601	3300012355	Vadose Zone Soil	RIEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGKSIHRPLKMLGTVSRVIRYLFDLRAEIRRAEALKRLVGAR*
Ga0137368_102735431	3300012358	Vadose Zone Soil	EIFARCRIAEWKVSEVVVRHFPREAGQSIHRPWKRLGTIRRVLQYLFELRAEIRRSEAIKKVVAAR*
Ga0137375_100801801	3300012360	Vadose Zone Soil	FARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTIRRVLRYLFELRAEMRRAEAIKRVVAAR*
Ga0136614_105487052	3300012684	Polar Desert Sand	SRWALGSPLHDINGGCRAFRRDVARRLEIRHRINFVGDEIYARCRIAGWKVSEVVVSHFPREAGQSIHRPWKMAGTILRVLRYLLDLRGEIRRSESANRVASTR*
Ga0157283_104085682	3300012907	Soil	IKHRINFVGDEIYARCRIAGWKVAEVIVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRREVKNAEALRRLAVKTR*
Ga0153915_125988272	3300012931	Freshwater Wetlands	REVAHKLEIRHRINFVGDEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFELREEIRRADALKRVVAAR*
Ga0164303_104140372	3300012957	Soil	DVARRIEIRHRINFVGDEIYARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTIRRVIRYLFDLRGEMRRAEQLRNVVKNGRG*
Ga0164306_119602212	3300012988	Soil	SPLHDINAGCRAFRRDVARRIEIKHRINFVGDEIYTRCRIAGWKVAEVIVRHFPREAGASIHRPFKMAGTIMRVIQYLFDLRAEMKRAEAMRRLAVKAR*
Ga0164305_102153992	3300012989	Soil	HRINFVGDEIYARCRIAGWKVTEVVVRHFPREAGQSIHRPWKMLGTIRRVIRYLFDLRGEMRRAEQLRNVVKNGRG*
Ga0164305_112104822	3300012989	Soil	PSHWILGSPLHDINAGCRAFRRDVARRIEIKHRINFVGDEIYTRCRIAGWKVAEVIVRHFPREAGASIHRPFKMAGTIMRVIRYLFDLRGEMKRADAMRRLAVKAR*
Ga0157371_112668951	3300013102	Corn Rhizosphere	IEIKHRINFVGDEIYTRCRIAGWKVAEVIVRHFPREAGASIHRPFKMAGTIMRVIRYLFDLRGEMKRADAMRRLAVKAR*
Ga0157374_125262561	3300013296	Miscanthus Rhizosphere	EIKHRINFVGDEIYARCRIAGWKVAEVIVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRREVKNAEALRRLAVKTR*
Ga0157379_104880822	3300014968	Switchgrass Rhizosphere	IEIKHRINFVGDEIYARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRSEMRQAESLKRLVRKKA*
Ga0167636_10205461	3300015075	Glacier Forefield Soils	VARRIEIKHRINFVGDEIYARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTIQRVFQYLFDLKGEMRRAEQLKRVADARKR*
Ga0180085_10615202	3300015259	Soil	RCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTISRVVRYLFDLRGEIRRADALKRVAGNR*
Ga0132258_107974963	3300015371	Arabidopsis Rhizosphere	EIRHRINFVGDEIFARCRIAGWNVSEVVVRHFPREAGQSIHRPWKMLGTIRRVIGYLFSLREEMRRNEALKRVVAAR*
Ga0132256_1022166721	3300015372	Arabidopsis Rhizosphere	VGDEIYARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTIRRVIRYLFDLRGEMRRAEQLRNVVKNGRG*
Ga0132255_1015233761	3300015374	Arabidopsis Rhizosphere	RRDVARRIEIKHRINFVGDEIYTRCRIAGWKVAEVIVRHFPREAGASIHRPFKMAGTIMRVIRYLFDLRGEMKRADAMRRLAVKAR*
Ga0132255_1020613762	3300015374	Arabidopsis Rhizosphere	FVGDEIFARCRIAGWKVAEVVVQHFPREAGQSIHRPWKMVGTVTRVVRYLFDLREEMRRSEALKRVVAAR*
Ga0187785_104581642	3300017947	Tropical Peatland	DEIYARCRIAGWKVTEVIVQHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRAEIHQAERLRRLVAKGRPAS
Ga0187780_112280932	3300017973	Tropical Peatland	ARCRIAGWKVGEVVVRHFPREAGQSIHRPWKMAGTIVRVIRYLFDLREEIARADALKRVVAAR
Ga0187777_101583142	3300017974	Tropical Peatland	GSPLHDINGGCRAFRKDVARRIEIRHRINFVGDEIFARCRIAGWKVGEVVVRHFPREAGQSIHRPWKMAGTIVRVIRYLFDLREEIARADALKRVVAAR
Ga0184621_101017521	3300018054	Groundwater Sediment	KGLNTLSGWTLGSPLHDINGGCRAFRRDVARAIEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMVGTVSRVLRYLFELRGEIRRSNATRRLAGAR
Ga0184623_104876531	3300018056	Groundwater Sediment	RAIEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMVGTVSRVLRYLFELRGEIRRADSMRPLVGAR
Ga0193739_11147282	3300020003	Soil	DEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMVGTVSRVLRYLFELRGEIRRADSARPLVGAR
Ga0222622_103405661	3300022756	Groundwater Sediment	DINGGCRAFRRDVARRIEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMVGTVSRVMRYLFELRGEIRRSESMKRLVGAG
Ga0247751_10396271	3300023069	Soil	EIKHRINFVGDEIYARCRIAGWKVAEVIVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRREVKNAEALRRLAVKAR
Ga0207671_110204222	3300025914	Corn Rhizosphere	RRDVARRIEIKHRINFVGDEIFVRCRIAGWRVDEVVVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRSEMHQAESMRRLTESQKRKAP
Ga0207662_103921902	3300025918	Switchgrass Rhizosphere	VGDEIFVRCRIAGWRVDEVVVRHFPREAGQSIHRPFKMLGTIMRVIRYLFDLRSEMHQAESMRRLTESQKRKAP
Ga0207709_101394941	3300025935	Miscanthus Rhizosphere	GDEIYARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRSEMRQAESLKRLVRKKA
Ga0207667_102404424	3300025949	Corn Rhizosphere	DEIFARCRIAGCKVAEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFDLRAEIRRADSMRRLVGAR
Ga0207658_120137252	3300025986	Switchgrass Rhizosphere	LGLRVLSHWILGSPLHDINAGCRAFRRDVARRIEIKHRINFVGDEIYTRCRIAGWKVAEVIVRHFPREAGASIHRPFKMAGTIMRVIRYLFDLRGEMKRADAMRRLAVKAR
Ga0207703_101750561	3300026035	Switchgrass Rhizosphere	LRVLSHWILGSPLHDINAGCRAFRRDVARRIEIKHRINFVGDEIYTRCRIAGWKVAEVIVRHFPREAGASIHRPFKMAGTIMRVIRYLFDLRGEMKRADAMRRLAVKAR
Ga0209472_11705321	3300026323	Soil	RQDLATRIEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTISRVMRYLFELRGEIRRADAMRRLVGAR
Ga0209968_10077642	3300027526	Arabidopsis Thaliana Rhizosphere	AFRRDVARRIEIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTISRVVRYLFDLRGEIRRADALKRVVGNR
Ga0209382_107935461	3300027909	Populus Rhizosphere	IYARCRIAGWKVDEVVVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRSEMRQAESLKRLVRKKA
Ga0310886_106166072	3300031562	Soil	KHRINFVGDEIYARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRSEMRQAESLKRLVRKKA
Ga0318560_101894682	3300031682	Soil	DEIFARCRIAGWRVCEVVVRHFPREAGQSIHRPLKMAGTIVRVIRYLFDLREEIARADALKRVVAAR
Ga0307468_1004698931	3300031740	Hardwood Forest Soil	INGGCRAFRRAVAQRIEIRHRINFVGDEIFARCRMAGWKVTEVVVQHFPREAGQSIHRPWKMVGTVMRVVRYLFELREEMRRSEALKRVVAGR
Ga0307468_1019765452	3300031740	Hardwood Forest Soil	GDEIYARCRIAGWRVSEVVVQHFPREAGQSIHRPWKMAGTIARVLRYLFERREEIRRSEALKRVVAAR
Ga0318492_104964532	3300031748	Soil	ARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTILRVIRYLFALRSEMNQAEAMRRLSENHRKPK
Ga0307473_108251661	3300031820	Hardwood Forest Soil	NGGCRAFRRDVARRIEIRHRINFVGDEIFARCRIAGWRVCEVVVRHFPREAGQSIHRPWKMAGTVVRVVRYLFDLREEIGRAEALKRVVAAR
Ga0318567_101591401	3300031821	Soil	CRIAGWRVCEVVVRHFPREAGQSIHRPLKMAGTIVRVIRYLFDLREEIARADALKRVVAA
Ga0306921_123865991	3300031912	Soil	ARCRIAGWKVTEVVVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRAEMHQAERLRRLVAKGRPAQ
Ga0310884_101016761	3300031944	Soil	VGDEIYARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRSEMRQAESLKRLVRKKA
Ga0326597_121348371	3300031965	Soil	KLEIRHRINFVGDEIFARCRIAGWKVSEVVVRHFPREAGQSIHRPWKMLGTIQRVLRYLFELRAEMRRAEAIKRVVAAR
Ga0318577_104846171	3300032091	Soil	IFARCRIAGWKVDEVIVRHFPREAGQSIHRPFKMLGTILRVIRYLFALRSEMNQAEAMRRLSENHRKPK
Ga0307471_1005153342	3300032180	Hardwood Forest Soil	IEIKHRINFVGDEIYARCRIAGWKVAEVVVQHFPREAGQSIHRPWKMLGTISRVIRYLFDLREEIQRSEKLKRVVVTRSH
Ga0315271_117737552	3300032256	Sediment	VARRIEIKHRINFVGDEIYARCRIAGWKVTEVVVQHFPREAGQSIHRPFKMLGTIWRVIRYLFDLRGEMKQAEQLRRLVVKAK
Ga0335085_103930791	3300032770	Soil	IEIKHRINFVGDEIFVRCRIAGWKVAEVVVQHFPREAGQSIHRPFKMLGTIWKVLKYLFALRAEMHQAERLRRLVEGRRAAS
Ga0335085_121324971	3300032770	Soil	LHDINGGCRAFRQAVARRIEIRHRINFVGDEIFARCRMAGWRVAEVVVQHFPREAGQSIHRPWKMVGTVTRVVRYLFDLRDEMRRNEALKRVVAAR
Ga0335082_108733852	3300032782	Soil	TLSRWVLGSPLHDINGGCRAFRQAVARRIEIRHRINFVGDEIFARCRMAGWKVAEVVVQHFPREAGQSIHRPWKMVGTVTRVVRYLFDLRDEMRRNEALKRVVAAR
Ga0335079_119829101	3300032783	Soil	RIAGWKVTEVVVRHFPREAGQSIHRPFKMLGTIFRVIRYLFDLRAEMHQAERLRRLVAKGRPAQ
Ga0214472_105068461	3300033407	Soil	AKRIEIRHRINFVGDEIFARCRIAGWNVGEVVVRHFPREAGTSIHRPWRMLGTIGRVIRYLFELRGEIRRADAMKRLVGAR
Ga0316620_125458182	3300033480	Soil	AFRQNVARRIEIRHRINFVGDEIFARCRMAGWKVSEVVVQHFPREAGQSIHRPWKMAGTVARVIRYLFDLREEMRRSEALKRVVAAR
Ga0326732_10489981	3300033501	Peat Soil	YARCRIAGWKVTEVVVQHFPREAGQSIHRPFKMLGTIWRVIRYLFDLRSEMHQAERLRRLVASKGKPQ
Ga0247830_107887951	3300033551	Soil	IKHRINFVGDEIYARCRIAGWKVDEVIVRHFPREGGQSIHRPFKMLGTISRVIRYLFDLRGEMKQTDALRRLAARPR
Ga0314869_018689_1_204	3300033759	Peatland	VRCRIAGWKVAEVVVQHFPREAGQSIHRPFRMLGTIWKVLRYLFALRAEMHQAERLRRLVEGRRTAS
Ga0364934_0045198_1391_1624	3300034178	Sediment	EIRHRINFVGDEIFARCRIAGWKVAEVVVRHFPREAGQSIHRPWKMLGTISRVLRYLFELRGEIRRADAMKRLARTS
Ga0364934_0358039_3_266	3300034178	Sediment	FRKDVARRIEIKHRINFVGDEIYARCRIAGWKVTEVIVQHFPREAGQSIHRPFKMLGTIWRVIRYLFDLRAEMDRAQQLRRLVVKAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059078

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences