NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F058950

Metagenome / Metatranscriptome Family F058950

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F058950
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 44 residues
Representative Sequence MVCLINYCALQDINLVDCMEIAYDQIKNRRGTLLPNGVFQKEV
Number of Associated Samples 89
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 91.04 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Duplodnaviria (35.821 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(27.612 % of family members)
Environment Ontology (ENVO) Unclassified
(49.254 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(62.687 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.58%    β-sheet: 8.45%    Coil/Unstructured: 61.97%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF00149Metallophos 23.88
PF11753DUF3310 2.99
PF00959Phage_lysozyme 2.99
PF09374PG_binding_3 2.99
PF00182Glyco_hydro_19 2.24
PF08291Peptidase_M15_3 1.49
PF13392HNH_3 1.49
PF03237Terminase_6N 0.75
PF03819MazG 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG3179Chitinase, GH19 familyCarbohydrate transport and metabolism [G] 2.24
COG3979ChitodextrinaseCarbohydrate transport and metabolism [G] 2.24


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms82.09 %
UnclassifiedrootN/A17.91 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002220|MLSBCLC_10427775Not Available738Open in IMG/M
3300002408|B570J29032_109048952Not Available577Open in IMG/M
3300002835|B570J40625_101409706All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300003277|JGI25908J49247_10117391All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage632Open in IMG/M
3300004125|Ga0066182_10122496All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage633Open in IMG/M
3300005581|Ga0049081_10018461Not Available2645Open in IMG/M
3300005581|Ga0049081_10120975All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300005581|Ga0049081_10244359All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300005581|Ga0049081_10287784All Organisms → cellular organisms → Bacteria → Proteobacteria569Open in IMG/M
3300005582|Ga0049080_10078253All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1132Open in IMG/M
3300005582|Ga0049080_10190553All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage679Open in IMG/M
3300005582|Ga0049080_10314616All Organisms → cellular organisms → Bacteria → Proteobacteria503Open in IMG/M
3300006637|Ga0075461_10096870All Organisms → cellular organisms → Bacteria → Proteobacteria930Open in IMG/M
3300006802|Ga0070749_10025279All Organisms → cellular organisms → Bacteria → Proteobacteria3735Open in IMG/M
3300006802|Ga0070749_10175462All Organisms → cellular organisms → Bacteria → Proteobacteria1236Open in IMG/M
3300006802|Ga0070749_10412217All Organisms → cellular organisms → Bacteria → Proteobacteria744Open in IMG/M
3300006919|Ga0070746_10536073All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage509Open in IMG/M
3300007229|Ga0075468_10212380Not Available560Open in IMG/M
3300007234|Ga0075460_10261635Not Available574Open in IMG/M
3300007363|Ga0075458_10009959All Organisms → cellular organisms → Bacteria → Proteobacteria3042Open in IMG/M
3300007708|Ga0102859_1189133All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium610Open in IMG/M
3300008116|Ga0114350_1007119Not Available5300Open in IMG/M
3300008116|Ga0114350_1058223All Organisms → Viruses → Predicted Viral1370Open in IMG/M
3300008266|Ga0114363_1129029All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage867Open in IMG/M
3300008267|Ga0114364_1071164All Organisms → Viruses → Predicted Viral1170Open in IMG/M
3300008450|Ga0114880_1032567All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2320Open in IMG/M
3300008450|Ga0114880_1090565All Organisms → Viruses → Predicted Viral1202Open in IMG/M
3300008450|Ga0114880_1090884All Organisms → Viruses → Predicted Viral1199Open in IMG/M
3300008450|Ga0114880_1138478All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage892Open in IMG/M
3300009082|Ga0105099_10349883All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage874Open in IMG/M
3300009131|Ga0115027_10932839All Organisms → cellular organisms → Bacteria → Proteobacteria674Open in IMG/M
3300009151|Ga0114962_10183169All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1235Open in IMG/M
3300009158|Ga0114977_10422205All Organisms → cellular organisms → Bacteria → Proteobacteria740Open in IMG/M
3300009164|Ga0114975_10080476All Organisms → cellular organisms → Bacteria1895Open in IMG/M
3300009169|Ga0105097_10409612All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium754Open in IMG/M
3300009180|Ga0114979_10244219All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300009183|Ga0114974_10077447All Organisms → Viruses → Predicted Viral2170Open in IMG/M
3300009183|Ga0114974_10212089All Organisms → cellular organisms → Bacteria → Proteobacteria1177Open in IMG/M
3300009449|Ga0115558_1274236Not Available676Open in IMG/M
3300010354|Ga0129333_11343162Not Available589Open in IMG/M
3300010370|Ga0129336_10515108All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium644Open in IMG/M
3300010374|Ga0114986_1001179All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6895Open in IMG/M
3300010374|Ga0114986_1106528Not Available508Open in IMG/M
3300010885|Ga0133913_12234084All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1347Open in IMG/M
3300010885|Ga0133913_13213117All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1079Open in IMG/M
3300012286|Ga0157137_104933All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300013005|Ga0164292_10808719Not Available592Open in IMG/M
3300013010|Ga0129327_10251407Not Available904Open in IMG/M
3300013372|Ga0177922_10502133Not Available719Open in IMG/M
3300013372|Ga0177922_11255001All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli736Open in IMG/M
3300014711|Ga0134314_103935All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage995Open in IMG/M
3300016776|Ga0182046_1340050Not Available605Open in IMG/M
3300016776|Ga0182046_1486213All Organisms → Viruses → Predicted Viral1195Open in IMG/M
3300017701|Ga0181364_1015429All Organisms → Viruses → Predicted Viral1273Open in IMG/M
3300017701|Ga0181364_1020981All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1075Open in IMG/M
3300017722|Ga0181347_1099726All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli829Open in IMG/M
3300017722|Ga0181347_1125159All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage716Open in IMG/M
3300017722|Ga0181347_1171525Not Available583Open in IMG/M
3300017723|Ga0181362_1085296All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage635Open in IMG/M
3300017747|Ga0181352_1028044All Organisms → Viruses → Predicted Viral1712Open in IMG/M
3300017754|Ga0181344_1172286All Organisms → cellular organisms → Bacteria → Proteobacteria613Open in IMG/M
3300017761|Ga0181356_1135532All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage774Open in IMG/M
3300017761|Ga0181356_1249606All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage506Open in IMG/M
3300017777|Ga0181357_1094846All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1134Open in IMG/M
3300017777|Ga0181357_1168703Not Available797Open in IMG/M
3300017777|Ga0181357_1172572All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300017777|Ga0181357_1313811All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300017778|Ga0181349_1247344All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage597Open in IMG/M
3300017780|Ga0181346_1050518All Organisms → Viruses → Predicted Viral1683Open in IMG/M
3300017780|Ga0181346_1077238All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1316Open in IMG/M
3300017780|Ga0181346_1210107All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli698Open in IMG/M
3300017784|Ga0181348_1095253All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1167Open in IMG/M
3300017784|Ga0181348_1248722All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage616Open in IMG/M
3300017785|Ga0181355_1217984All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage743Open in IMG/M
3300017785|Ga0181355_1279431All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage633Open in IMG/M
3300017785|Ga0181355_1323956All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage573Open in IMG/M
3300018415|Ga0181559_10386480Not Available770Open in IMG/M
3300020550|Ga0208600_1053716All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage599Open in IMG/M
3300020551|Ga0208360_1030254All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage704Open in IMG/M
3300021579|Ga0213918_1009641All Organisms → cellular organisms → Bacteria → Proteobacteria1200Open in IMG/M
3300021962|Ga0222713_10774770All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage538Open in IMG/M
3300022179|Ga0181353_1024706All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1587Open in IMG/M
3300022179|Ga0181353_1098851All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli719Open in IMG/M
3300022179|Ga0181353_1146618All Organisms → cellular organisms → Bacteria → Proteobacteria546Open in IMG/M
3300022190|Ga0181354_1031426All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1736Open in IMG/M
3300022190|Ga0181354_1157379Not Available706Open in IMG/M
3300022407|Ga0181351_1140267All Organisms → cellular organisms → Bacteria → Proteobacteria882Open in IMG/M
3300022925|Ga0255773_10061840Not Available2155Open in IMG/M
3300022929|Ga0255752_10402753Not Available538Open in IMG/M
3300025429|Ga0208500_1032275All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa642Open in IMG/M
3300025635|Ga0208147_1007897All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3003Open in IMG/M
3300025655|Ga0208795_1155898All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300025818|Ga0208542_1115624Not Available757Open in IMG/M
3300027488|Ga0255084_1094059All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli504Open in IMG/M
3300027492|Ga0255093_1018476All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1546Open in IMG/M
3300027503|Ga0255182_1134602All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage550Open in IMG/M
3300027529|Ga0255077_1014740All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1399Open in IMG/M
3300027579|Ga0255068_118142All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage775Open in IMG/M
3300027593|Ga0255118_1068827All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage584Open in IMG/M
3300027608|Ga0208974_1035343All Organisms → Viruses → Predicted Viral1490Open in IMG/M
3300027659|Ga0208975_1029643All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1754Open in IMG/M
3300027659|Ga0208975_1194454All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage545Open in IMG/M
3300027759|Ga0209296_1193174All Organisms → cellular organisms → Bacteria → Proteobacteria878Open in IMG/M
3300027764|Ga0209134_10059887All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli1273Open in IMG/M
3300027764|Ga0209134_10089388All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1048Open in IMG/M
3300027772|Ga0209768_10034348All Organisms → Viruses → Predicted Viral2752Open in IMG/M
3300027798|Ga0209353_10110281All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1239Open in IMG/M
3300027798|Ga0209353_10119205All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1187Open in IMG/M
3300027798|Ga0209353_10385048All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage579Open in IMG/M
3300027836|Ga0209230_10486510Not Available701Open in IMG/M
3300028025|Ga0247723_1033377All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1597Open in IMG/M
3300028025|Ga0247723_1034588All Organisms → cellular organisms → Bacteria → Proteobacteria1558Open in IMG/M
3300028025|Ga0247723_1035825All Organisms → Viruses → Predicted Viral1518Open in IMG/M
3300028025|Ga0247723_1042834All Organisms → Viruses → Predicted Viral1336Open in IMG/M
3300028025|Ga0247723_1043858All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300031673|Ga0307377_10831987Not Available636Open in IMG/M
3300031857|Ga0315909_10299802All Organisms → Viruses → Predicted Viral1202Open in IMG/M
3300031857|Ga0315909_10303796All Organisms → Viruses → Predicted Viral1191Open in IMG/M
3300031857|Ga0315909_10361517All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1056Open in IMG/M
3300031857|Ga0315909_10953909Not Available523Open in IMG/M
3300031857|Ga0315909_10992136All Organisms → cellular organisms → Bacteria → Proteobacteria508Open in IMG/M
3300031857|Ga0315909_10994083All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli507Open in IMG/M
3300031951|Ga0315904_10644142All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli902Open in IMG/M
3300031963|Ga0315901_11214339All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage510Open in IMG/M
3300031999|Ga0315274_11040460All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300032050|Ga0315906_10107481All Organisms → Viruses → Predicted Viral2765Open in IMG/M
3300032092|Ga0315905_10000900All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage32464Open in IMG/M
3300032093|Ga0315902_10494831All Organisms → Viruses → Predicted Viral1066Open in IMG/M
3300032116|Ga0315903_10450929All Organisms → Viruses → Predicted Viral1031Open in IMG/M
3300032116|Ga0315903_10724783All Organisms → cellular organisms → Bacteria → Proteobacteria739Open in IMG/M
3300032118|Ga0315277_11265674All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage649Open in IMG/M
3300034062|Ga0334995_0556232All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli676Open in IMG/M
3300034109|Ga0335051_0562286Not Available524Open in IMG/M
3300034200|Ga0335065_0699007All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli579Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake27.61%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater9.70%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous8.21%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic7.46%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.72%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater4.48%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh3.73%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment3.73%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.99%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton2.99%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.99%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater2.24%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.24%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.49%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater1.49%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.49%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.49%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.49%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.75%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.75%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.75%
Surface WaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water0.75%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.75%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.75%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.75%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.75%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.75%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002220Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011EngineeredOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300004125Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)EnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007708Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02EnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010374Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S-1-Day17EnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300012286Freshwater microbial communities from Ausable River, Ontario, Canada - S47EnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300014711Surface water microbial communities from Bangladesh - BaraHaldiaSW0111EnvironmentalOpen in IMG/M
3300016776Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011505AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020550Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020551Freshwater microbial communities from Lake Mendota, WI - 27JUL2010 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300021579Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 2-17 MGEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300025429Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)EnvironmentalOpen in IMG/M
3300025635Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027488Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_8dEnvironmentalOpen in IMG/M
3300027492Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8dEnvironmentalOpen in IMG/M
3300027503Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8dEnvironmentalOpen in IMG/M
3300027529Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8hEnvironmentalOpen in IMG/M
3300027579Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_8hEnvironmentalOpen in IMG/M
3300027593Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8hEnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027764Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027772Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027836Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034109Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158EnvironmentalOpen in IMG/M
3300034200Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MLSBCLC_1042777523300002220Hydrocarbon Resource EnvironmentsVTLVNACALADVDAVDCFAGSYDEIKHRKGTLMPNGVFVKEV*
B570J29032_10904895243300002408FreshwaterVGDVMVCLINYCALQDINLVDCMEIAYDQIKNRKGTLLPNGVFQKETT*
B570J40625_10140970633300002835FreshwaterDSVGDVMVCLINYCALQDINLVDCMEIAYDQIKNRRGTLLPNGVFQKDT*
JGI25908J49247_1011739133300003277Freshwater LakeLINYCALQDINLVDCMEIAYDQIKNRRGTLLPNGVFQKDT*
Ga0066182_1012249613300004125Freshwater LakeLINYCALQDINLVDCMEVAYDQIKNRKGILLPNGVFQKTLE*
Ga0049081_1001846163300005581Freshwater LenticIHLVDCMEVAYDQIKNRRGTLLPNGVFRKTFDHL*
Ga0049081_1012097553300005581Freshwater LenticLQDIELVSCLEVAYDAIKNRKGTLLPSGVYVKEAA*
Ga0049081_1024435913300005581Freshwater LenticGDVMVCLINYCALQDIQLVDCMEVAYDQIKNRKGILLPNGVFQKDTT*
Ga0049081_1028778433300005581Freshwater LenticINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEM*
Ga0049080_1007825343300005582Freshwater LenticEAIVDSVGDVMVCLINYCVLQDINLVQCMEIAYDQIKNRRGILLPNGVFQKDT*
Ga0049080_1019055313300005582Freshwater LenticGIVDSVGDVMVCLINYCALQDIHLVDCMEIAYDQIKNRRGTLLPNGVFQKDT*
Ga0049080_1031461613300005582Freshwater LenticNYCALQDIQLVDCMEVAYDQIKNRKGILLPNGVFQKDTT*
Ga0075461_1009687013300006637AqueousEGIVDAVGDVMVCLVNYCAIKDINLVDCMQVAYDSIKHRRGVLLPNGVFVKNDGVSSE*
Ga0070749_1002527913300006802AqueousAVGDVMVCLINYCALQDINLVDCMEIAYDQIKHRKGTLMASGVFVKEV*
Ga0070749_1017546233300006802AqueousYCAIKDINLVDCMQVAYDSIKHRRGVLLPNGVFVKNDGVSSE*
Ga0070749_1041221713300006802AqueousNDEEGIVDAVGDVMVCLVNYCAIKDINLVDCMRVAYDSIKHRRGVLLPNGVFVKNDGVSSE*
Ga0070746_1053607323300006919AqueousCLVNYCAIKDINLVDCMQVAYDSIKHRRGVLLPNGVFVKNDGVSSE*
Ga0075468_1021238023300007229AqueousYCAIKDIDLVSCMDAAYSQIKDRKGTLLPNGVFVKE*
Ga0075460_1026163523300007234AqueousDATIKNDEEGIVDAVGDVMVCLVNYCAIKDISLVDSMYVAYDTIKHRRGVLLPNGVFVKNDGVSSE*
Ga0075458_1000995983300007363AqueousINYCALQDINLVDCMEIAYDQIKHRKGTLMASGVFVKEV*
Ga0102859_118913323300007708EstuarineALQDINLIVCMYSAFREIQDRKGTLLTNGVFVKE*
Ga0114350_1007119123300008116Freshwater, PlanktonDVMVCLINYCALQDINLVNCMEVAYDQIKNRKGILLPNGVFKRDAT*
Ga0114350_105822313300008116Freshwater, PlanktonDVMVCLINYCALQDINLVNCMEVAYDQIKNRKGILLPNGVFQRDTT*
Ga0114363_112902913300008266Freshwater, PlanktonINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEI*
Ga0114364_107116423300008267Freshwater, PlanktonVMVCLINYCALQDIQLVDCMEVAYDQIKNRKGILLPNGVFQKDTT*
Ga0114880_103256753300008450Freshwater LakeVMVCLINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEV*
Ga0114880_109056513300008450Freshwater LakeDAVGDVMVCLINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKDII*
Ga0114880_109088423300008450Freshwater LakeDVMVCLINYCALQDINLVDCMEIAYDQIKNRKGTLLPNGVFQKDST*
Ga0114880_113847813300008450Freshwater LakeAVGDVMVCLINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEI*
Ga0105099_1034988323300009082Freshwater SedimentMVCLVNYCALQDINLVDCMEVAYDQIKNRKGTLLPNGVFKKDAT*
Ga0115027_1093283913300009131WetlandEAIVDAVGDVMVCLVNYCALQDINLVDCMEVAYDQIKNRRGTLLPNGLFVKETI*
Ga0114962_1018316963300009151Freshwater LakeCALRDINLVSCMEVAYDQIKNRKGILLPNGVFVKE*
Ga0114977_1042220533300009158Freshwater LakeVGDVMVCLINYCALKDIHLVDCMEVAYDQIKNRKGTLLPNGLFVNDST*
Ga0114975_1008047653300009164Freshwater LakeVMVCLINYCALKDISLVKCLEGAYEEIKDRKGTLMPNGVFVKD*
Ga0105097_1040961213300009169Freshwater SedimentINYCALQDINLVDCMELAYSQIKDRKGTLLPNGVFVKE*
Ga0114979_1024421913300009180Freshwater LakeDREAIVDSVGDVMVCLINYCALQDINLVNCMEVAYDQIKNRRGIMSKEGIFHKD*
Ga0114974_1007744763300009183Freshwater LakeDEDAIVDSVGDVMVCLINYCVLQDINLVKCMEIAYDQIKNRGGILLPNGVFQKET*
Ga0114974_1021208933300009183Freshwater LakeDSVGDVMVCLINYCALQDINLVDCMEVAYDQIKNRRGTLLPNGVFQKDIT*
Ga0115558_127423623300009449Pelagic MarineAIKDIDLVSCMDAAYGQIKDRKGTLLPNGVFVKE*
Ga0129333_1134316213300010354Freshwater To Marine Saline GradientNLCALEKTSLRECLEGAWEEIKDRRGILLPNGVFVKEVME*
Ga0129336_1051510813300010370Freshwater To Marine Saline GradientLVCMVNMCALLDINMVNCMEIAYDQIKHRKGTMLPSGVFVKEA*
Ga0114986_100117913300010374Deep SubsurfaceQDLNLVDCMEVAYDQIKNRKGTLLPNGLFVREPT*
Ga0114986_110652833300010374Deep SubsurfaceLVNYCALQDLNLVDCMEVAYDQIKNRKGILLPNGLFVKDST*
Ga0133913_1223408473300010885Freshwater LakeLIIYCALLDINLVDCMEYAYKEIKNRKGTLLPNGVFLKELP*
Ga0133913_1321311723300010885Freshwater LakeGDVMVCLINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEV*
Ga0157137_10493313300012286FreshwaterQDINLVDCMEVAYDQIKNRRGTLLPNGLFVKETI*
Ga0164292_1080871913300013005FreshwaterCALQDIQLVDCMEVAYDQIKNRKGILLPNGVFQKDTT*
Ga0129327_1025140733300013010Freshwater To Marine Saline GradientVNYCAIKDIDLVSCMDAAYSQIKDRKGTLLPNGVFVKE*
Ga0177922_1050213333300013372FreshwaterVMVCLINYCALQDINLVDCMEIAYDQIKNRRGTLLPNGDFQKDT*
Ga0177922_1125500133300013372FreshwaterNYCVLQDINLVQCMEIAYDQIKNRKGILLPNGVFQKES*
Ga0134314_10393533300014711Surface WaterAVGDVMVCLVNYCALADIDLVECMYVAYDQIKHRKGTLLPNGIFVKEV*
Ga0182046_134005023300016776Salt MarshVDAVGDVMVCLVNYCAIKDINLVDAMYVAYDSIKHRRGVLLPNGVFVKNDGVSSE
Ga0182046_148621323300016776Salt MarshINVCALLDIDPVDCLQVAYDQIKHRKGTLLPNGVFVKE
Ga0181364_101542973300017701Freshwater LakeVYCALQDINLVDCMELAYEEIKDRKGTLLSNGVFVKDEA
Ga0181364_102098143300017701Freshwater LakeVGDVMVCLINYCALQDINLVDCMEVAYDQIKNRKGILLPNGVFQKTLD
Ga0181347_109972633300017722Freshwater LakeLQDINLVDCMEVAYDQIKNRKGILLPNGVFQKTLE
Ga0181347_112515913300017722Freshwater LakeCLINYCALQDINLVDCMEVAYDQIKNRKGTLLPNGVFQKTLD
Ga0181347_117152513300017722Freshwater LakeDVMVCLINYCALQDINLVDCMEIAYDQIKNRRGTLLPNGVFQKDT
Ga0181362_108529623300017723Freshwater LakeVGDVMVCLINYCALQDINLVDCMEIAYDQIKNRRGTLLPNGVFQKDT
Ga0181352_102804443300017747Freshwater LakeALQDLNLVDCMEVAYDQIKNRRGTLLPNGLFVKETI
Ga0181344_117228633300017754Freshwater LakeDVMVCLINYCVLQDINLVQCMEIAYDQIKNRKGILLPNGVFQKEN
Ga0181356_113553233300017761Freshwater LakeCALQDINLVDCMEIAYDQIKNRRGTLLPNGVFQKDST
Ga0181356_124960613300017761Freshwater LakeCLIVYCALQDINLVDCMELAYEEIKDRKGTLLANGVFVKDEA
Ga0181357_109484623300017777Freshwater LakeMVCLINYCALQDIQLVDCMEVAYDQIKNRKGILLPNGVFQKDTT
Ga0181357_116870333300017777Freshwater LakeLINYCVLQDINLVQCMEIAYDQIKNRKGILLPNGVFQKEN
Ga0181357_117257213300017777Freshwater LakeVGDVMVCLINYCALQDINLVDCMEIAYDQIKNKRGIMSKEGIFNKD
Ga0181357_131381113300017777Freshwater LakeDAVGDVMVCLINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEI
Ga0181349_124734413300017778Freshwater LakeLINYCALQDINLVDCMEIAYDQIKNRKGILLPNGVFQKTLD
Ga0181346_105051843300017780Freshwater LakeVGDVMVCLINYCALKDIHLVDCMEVAYDQIKNRGGILLPNGVFQRDTT
Ga0181346_107723833300017780Freshwater LakeCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEIT
Ga0181346_121010733300017780Freshwater LakeGDVMVCLINYCALQDIQLVDCMEVAYDQIKNRKGILLPNGVFQKDTT
Ga0181348_109525313300017784Freshwater LakeVCLINYCALQDINLVDCMEVAYDQIKNRKGILLPNGVFQKTLE
Ga0181348_124872213300017784Freshwater LakeLQDINLVDCMELAYEEIKDRKGTLLANGVFVKDEA
Ga0181355_121798423300017785Freshwater LakeYCALQDINLVDCMEVAYDQIKNRRGTLLPNGVFKKETT
Ga0181355_127943143300017785Freshwater LakeLINYCALQDINLVDCMEVAYDQIKNRKGTLLPNGVFQKTLD
Ga0181355_132395643300017785Freshwater LakeDVMVCLINYCALQDLNLVNCMEVAYDQIKNRRGTVLPNGVFQKEI
Ga0181559_1038648013300018415Salt MarshDISLVDAMYVAYDTIKHRRGVLLPNGVFVKNDGVSSE
Ga0208600_105371613300020550FreshwaterSVGDVMVCLINYCALQDINLVDCMEVAYDQIKNRKGILLPNGVFQKTLE
Ga0208360_103025433300020551FreshwaterDVMVCLINYCALQDINLVDCMEVAYDQIKNRKGTLLPNGVFQKTLD
Ga0213918_100964113300021579FreshwaterLVNYCALQDINLVDCMKVAYDQIKHRRGTLMPNGVFIKEA
Ga0222713_1077477013300021962Estuarine WaterAIVDSVGDVMVCLINYCALQDINLVNCMEVAYDQIKNRRGTLLPNGVFQKEI
Ga0181353_102470643300022179Freshwater LakeERGVLQDINLVQCMEIAYDQIKNRKGILLPNGVFQKEP
Ga0181353_109885113300022179Freshwater LakeSKEAIVDAVGDVMVCLINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEV
Ga0181353_114661813300022179Freshwater LakeSVGDVMVCLVNYCALQDINLVDCMEVAYDQIKNRRGTLLPNGVFKKD
Ga0181354_103142613300022190Freshwater LakeVCLINYCVLQDINLVQCMEIAYDQIKNRKGILLPNGVFQKES
Ga0181354_115737933300022190Freshwater LakeALQDINLVDCMEVAYDQIKNRKGILLPNGVFQKTLD
Ga0181351_114026733300022407Freshwater LakeRGDVMVCLINYCALQDINLVDCMEVAYDQIKNRKGILLPNGVFQKTLD
Ga0255773_1006184053300022925Salt MarshNVCALLDIDPVDCLQVAYDQIKHRKGTLLPNNGVFVKE
Ga0255752_1040275313300022929Salt MarshLINVCALLDIDPVDCLQVAYDQIKHRKGTLLPNNGVFVKE
Ga0208500_103227533300025429FreshwaterVMVCLVNYCALQDIDLVSCMYAAYVEIKDRKGTLMPNGVFVKE
Ga0208147_100789783300025635AqueousINYCALQDINLVDCMEIAYDQIKHRKGTLMASGVFVKEV
Ga0208795_115589813300025655AqueousVMVCLINYCALQDINIVDCMNEAYDQIKNRKGTLLANGVFVKES
Ga0208542_111562423300025818AqueousIKNDEEGIVDAVGDVMVCLVNYCAIKDINLVDCMRVAYDSIKHRRGVLLPNGVFVKNDGVSSE
Ga0255084_109405923300027488FreshwaterALQDLNLVDCMEVAYDQIKNRRGTLLPSGVFQKEAT
Ga0255093_101847613300027492FreshwaterAVGDVMVCLVNYCALQDLNLVDCMEVAYDQIKNRRGTLLPSGVFQKEAT
Ga0255182_113460223300027503FreshwaterNYCALQDIDLVSCMQVAYDQIKHRKGTLLPSGVFVKE
Ga0255077_101474033300027529FreshwaterVGDVMVCLVNYCALQDLNLVDCMEVAYDQIKNRRGTLLPSGVFQKEAT
Ga0255068_11814223300027579FreshwaterDAVGDVMVCLVNYCALQDLNLVDCMEVAYDQIKNRRGTLLPSGVFQKEAT
Ga0255118_106882743300027593FreshwaterINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEI
Ga0208974_103534313300027608Freshwater LenticCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFRKTFDHL
Ga0208975_102964313300027659Freshwater LenticCALQDINLVDCMEVAYDQIKNRKGILLPNGVFRKDPDTI
Ga0208975_119445413300027659Freshwater LenticCVLQDINLVQCMEIAYDQIKNRKGILLPNGVFQKEI
Ga0209296_119317413300027759Freshwater LakeGDVMVCLINYCALQDINLVDCMEIAYDQIKNRKGILLPNGVFQKTLD
Ga0209134_1005988713300027764Freshwater LakeINYCALQDINLVDCMEIAYDQIKNRRGTLLPNGVFQKDT
Ga0209134_1008938833300027764Freshwater LakeYCVLQDINLVQCMEIAYDQIKNRKGILLPNGVFQKEP
Ga0209768_1003434813300027772Freshwater LakeAVGDVMVCLINYCALKDIHLVDCMEVAYDQIKNRGGILLPNGVFQRDTT
Ga0209353_1011028113300027798Freshwater LakeINYCVLQDINLVNCMEVAYDQIKNRKGILLPNGVFQKEI
Ga0209353_1011920523300027798Freshwater LakeMVCLINYCALQDINLVDCMEIAYDQIKNRRGTLLPNGVFQKEV
Ga0209353_1038504813300027798Freshwater LakeNYCALQDIDLVRCMKFAYAEIKDRKGMLLPNGVFVKQ
Ga0209230_1048651013300027836Freshwater And SedimentVMVCLINYCVLQDINLVQCMEIAYDQIKNRKGILLPNGVFQKEP
Ga0247723_103337713300028025Deep Subsurface SedimentDVMVCLINYCALQDIHLVDCMEIAYDQIKNRRGTLLPNGVFQKDT
Ga0247723_103458813300028025Deep Subsurface SedimentAIVDSVGDVMVCLINYCALQDINLVNCMEIAYDQIKNRRGTLLSNGVFKKE
Ga0247723_103582513300028025Deep Subsurface SedimentAVGDVMVCLINYCALQDIQLVDCMEVAYDQIKNRKGILLPNGVFQKDTT
Ga0247723_104283433300028025Deep Subsurface SedimentVGDVMVCLVNYCALQDLNLVDCMEVAYDQIKNRRGTLLPSGVFQKDAT
Ga0247723_104385813300028025Deep Subsurface SedimentEEIMDGVGDVMTALVIYCALQDINLVNCMEIAFDQIKSRKGVLLPNGLFVREIT
Ga0307377_1083198713300031673SoilDATIKNDEEGIVDAVGDVMVCLVNYCAIKDINLVDCMRVAYDAIKHRRGVLLPNGVFVKNDGVSSE
Ga0315909_1029980233300031857FreshwaterLINYCALQDINLVDCMEIAYDQIKNRKGTLLPNGVFQKDST
Ga0315909_1030379633300031857FreshwaterDSVGDVMVCLINYCALQDINLVNCMEVAYDQIKNRKGILLPNGVFQRDTT
Ga0315909_1036151723300031857FreshwaterNYCVLQDINLVNCMEVAYDQIKNRKGILLPNGVFQRDAT
Ga0315909_1095390933300031857FreshwaterNYCALQDINLVDCMEIAYDQIKNRKGTLLPNGVFQKDT
Ga0315909_1099213613300031857FreshwaterVGDVMVCLINYCALQDINLVDCMEIAYDQIKNRRGTLLPNGVFQKEV
Ga0315909_1099408313300031857FreshwaterLINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEV
Ga0315904_1064414213300031951FreshwaterGDVMVCLINYCALQDIHLVDCMEIAYDQIKNRRGTLLPNGVFQKDT
Ga0315901_1121433933300031963FreshwaterGDVMVCLINYCALQDINLVDCMEVAYDQIKNRKGTLLPNGVFQKTLD
Ga0315274_1104046033300031999SedimentLVTLILYCALQDIDLVTCIESAYGEIQHRKGTLLPNGVFVKE
Ga0315906_1010748113300032050FreshwaterDVMVCLINYCALQDINLVNCMEVAYDQIKNRKGILLPNGVFKRDAT
Ga0315905_1000090013300032092FreshwaterALQDLNLVDCMEVAYDQIKNRKGTLLPNGLFVKESI
Ga0315902_1049483113300032093FreshwaterCLINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEV
Ga0315903_1045092913300032116FreshwaterVMVCLINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKEV
Ga0315903_1072478313300032116FreshwaterKEAIVDAVGDVMVCLINYCALQDIHLVDCMEVAYDQIKNRRGTLLPNGVFQKTFDHL
Ga0315277_1126567413300032118SedimentAGIADGVGDVMVCLINYCALQDIHLVECMYAAYAEIKHRKGTLLPNGVFVKE
Ga0334995_0556232_544_6753300034062FreshwaterVCLINYCALQDIQLVDCMEVAYDQIKNRKGILLPNGVFQKDTT
Ga0335051_0562286_3_1163300034109FreshwaterMCALLDIDMVDCLEGSWNQIKNRKGTLLPSGVFVKEN
Ga0335065_0699007_3_1463300034200FreshwaterGDVMVCLVNYCALQDLNLVDCMEVAYDQIKNRRGTLLPNGVFQKDAT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.