Metagenome Family F058549

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058549
Family Type	Metagenome
Number of Sequences	135
Average Sequence Length	76 residues
Representative Sequence	MKRLLGTVVAAIVLTLTLIMPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEVCTVE
Number of Associated Samples	115
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.82 %
% of genes near scaffold ends (potentially truncated)	24.44 %
% of genes from short scaffolds (< 2000 bps)	82.22 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.593 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (37.778 % of family members)
Environment Ontology (ENVO)	Unclassified (28.148 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.296 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.19% β-sheet: 12.38% Coil/Unstructured: 51.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF09369	MZB	25.19
PF00528	BPD_transp_1	14.07
PF00583	Acetyltransf_1	4.44
PF05163	DinB	2.22
PF00699	Urease_beta	2.22
PF01979	Amidohydro_1	1.48
PF00174	Oxidored_molyb	1.48
PF00027	cNMP_binding	1.48
PF03641	Lysine_decarbox	0.74
PF07366	SnoaL	0.74
PF12867	DinB_2	0.74
PF09360	zf-CDGSH	0.74
PF12697	Abhydrolase_6	0.74
PF07883	Cupin_2	0.74
PF12681	Glyoxalase_2	0.74
PF08402	TOBE_2	0.74
PF13673	Acetyltransf_10	0.74
PF04525	LOR	0.74
PF07731	Cu-oxidase_2	0.74
PF01571	GCV_T	0.74
PF03176	MMPL	0.74
PF00378	ECH_1	0.74
PF08450	SGL	0.74
PF04542	Sigma70_r2	0.74
PF00578	AhpC-TSA	0.74
PF00795	CN_hydrolase	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0832	Urease beta subunit	Amino acid transport and metabolism [E]	2.22
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.22
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	1.48
COG3915	Uncharacterized conserved protein	Function unknown [S]	1.48
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.74
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.74
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.74
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.74
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.74
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.74
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.74
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.74
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.74
COG4894	Putative phospholipid scramblase YxjI, Tubby2 superfamily	Lipid transport and metabolism [I]	0.74
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.74

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.59 %
Unclassified	root	N/A	27.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.59 %
Unclassified	root	N/A	27.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.59 %
Unclassified	root	N/A	27.41 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.00 %
Unclassified	root	N/A	27.41 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.81 %
Unclassified	root	N/A	27.41 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.22 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.89 %
Unclassified	root	N/A	27.41 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.41 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	7.41 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.41 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.44 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.22 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.22 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.74 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.41 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	7.41 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	4.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.44 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.22 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.74 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.74 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.74 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.41 %
Herbidospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora	7.41 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.44 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.22 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	2.96 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.48 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.74 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.74 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.74 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.41 %
Herbidospora mongoliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	7.41 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.44 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.22 %
Mycolicibacterium neoaurum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium neoaurum	2.96 %
Pseudonocardia acaciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acaciae	0.74 %
Mycobacterium xenopi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi	0.74 %
Mycobacterium simiae complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex	0.74 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	0.74 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.74 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.41 %
Herbidospora mongoliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	7.41 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.44 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.22 %
Mycolicibacterium neoaurum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium neoaurum	2.96 %
Mycobacterium triplex	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium triplex	0.74 %
Pseudonocardia acaciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acaciae	0.74 %
Mycobacterium xenopi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi	0.74 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	0.74 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.74 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2044078003\|MGB_F548DK201DTQVG	Not Available	569	Open in IMG/M
3300000956\|JGI10216J12902_100807627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6070	Open in IMG/M
3300000956\|JGI10216J12902_103961143	Not Available	1286	Open in IMG/M
3300001361\|A30PFW6_1006529	Not Available	2093	Open in IMG/M
3300004156\|Ga0062589_100118395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1737	Open in IMG/M
3300004157\|Ga0062590_100468505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1061	Open in IMG/M
3300004463\|Ga0063356_100015462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium neoaurum	7011	Open in IMG/M
3300004463\|Ga0063356_102195456	Not Available	840	Open in IMG/M
3300004479\|Ga0062595_101028309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	711	Open in IMG/M
3300004479\|Ga0062595_101394979	Not Available	638	Open in IMG/M
3300005162\|Ga0066814_10000366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2634	Open in IMG/M
3300005183\|Ga0068993_10028059	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300005330\|Ga0070690_101170914	Not Available	612	Open in IMG/M
3300005332\|Ga0066388_103776601	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005338\|Ga0068868_100194803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1687	Open in IMG/M
3300005345\|Ga0070692_10373068	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005347\|Ga0070668_101875560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300005356\|Ga0070674_100092832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2183	Open in IMG/M
3300005438\|Ga0070701_10475097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	807	Open in IMG/M
3300005441\|Ga0070700_100821402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	750	Open in IMG/M
3300005444\|Ga0070694_100601330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	886	Open in IMG/M
3300005447\|Ga0066689_10173994	Not Available	1293	Open in IMG/M
3300005451\|Ga0066681_10732862	Not Available	600	Open in IMG/M
3300005466\|Ga0070685_11117738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	596	Open in IMG/M
3300005540\|Ga0066697_10435632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	757	Open in IMG/M
3300005558\|Ga0066698_10339161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1039	Open in IMG/M
3300005577\|Ga0068857_100641087	Not Available	1006	Open in IMG/M
3300005764\|Ga0066903_102740835	Not Available	956	Open in IMG/M
3300005764\|Ga0066903_103765865	Not Available	815	Open in IMG/M
3300005842\|Ga0068858_100696854	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300006046\|Ga0066652_101113797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300006794\|Ga0066658_10014295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2988	Open in IMG/M
3300009012\|Ga0066710_104075559	Not Available	546	Open in IMG/M
3300009012\|Ga0066710_104351301	Not Available	529	Open in IMG/M
3300009098\|Ga0105245_12386432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	582	Open in IMG/M
3300009137\|Ga0066709_100550479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1634	Open in IMG/M
3300009147\|Ga0114129_13297450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300009177\|Ga0105248_12474830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	592	Open in IMG/M
3300010396\|Ga0134126_10966370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300012011\|Ga0120152_1004508	All Organisms → cellular organisms → Bacteria	6809	Open in IMG/M
3300012019\|Ga0120139_1177575	Not Available	561	Open in IMG/M
3300012198\|Ga0137364_10615034	All Organisms → cellular organisms → Bacteria → Terrabacteria group	819	Open in IMG/M
3300012198\|Ga0137364_11064020	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300012208\|Ga0137376_11243180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	634	Open in IMG/M
3300012897\|Ga0157285_10224670	Not Available	603	Open in IMG/M
3300012908\|Ga0157286_10086394	Not Available	892	Open in IMG/M
3300012911\|Ga0157301_10210481	Not Available	660	Open in IMG/M
3300012912\|Ga0157306_10405507	Not Available	534	Open in IMG/M
3300012931\|Ga0153915_10377117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1601	Open in IMG/M
3300012951\|Ga0164300_10590245	Not Available	653	Open in IMG/M
3300012951\|Ga0164300_10713900	Not Available	609	Open in IMG/M
3300012955\|Ga0164298_10534691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300012957\|Ga0164303_10026700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2312	Open in IMG/M
3300012957\|Ga0164303_10506485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300012958\|Ga0164299_10273354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300012958\|Ga0164299_10515748	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300012960\|Ga0164301_11275347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594	Open in IMG/M
3300012984\|Ga0164309_11043133	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300012985\|Ga0164308_11689516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium xenopi	587	Open in IMG/M
3300012987\|Ga0164307_10015170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium neoaurum	3854	Open in IMG/M
3300012989\|Ga0164305_10014549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium neoaurum	3923	Open in IMG/M
3300012989\|Ga0164305_12201047	Not Available	507	Open in IMG/M
3300013308\|Ga0157375_10288750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1803	Open in IMG/M
3300014325\|Ga0163163_10692487	Not Available	1083	Open in IMG/M
3300014326\|Ga0157380_10609810	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300014326\|Ga0157380_11953250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	648	Open in IMG/M
3300014968\|Ga0157379_11869337	Not Available	591	Open in IMG/M
3300015371\|Ga0132258_10690163	All Organisms → cellular organisms → Bacteria	2570	Open in IMG/M
3300015372\|Ga0132256_103079870	Not Available	560	Open in IMG/M
3300015373\|Ga0132257_101293962	Not Available	925	Open in IMG/M
3300017792\|Ga0163161_11919889	Not Available	527	Open in IMG/M
3300018027\|Ga0184605_10013390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3188	Open in IMG/M
3300018027\|Ga0184605_10446982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300018054\|Ga0184621_10003233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4263	Open in IMG/M
3300018061\|Ga0184619_10001772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	7700	Open in IMG/M
3300018468\|Ga0066662_12022285	Not Available	603	Open in IMG/M
3300018468\|Ga0066662_12447147	Not Available	550	Open in IMG/M
3300018482\|Ga0066669_10959777	All Organisms → cellular organisms → Bacteria → Terrabacteria group	769	Open in IMG/M
3300019356\|Ga0173481_10100177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	1112	Open in IMG/M
3300019362\|Ga0173479_10542570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300019767\|Ga0190267_10883669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	609	Open in IMG/M
3300019869\|Ga0193705_1050754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	856	Open in IMG/M
3300021080\|Ga0210382_10165537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	952	Open in IMG/M
3300021344\|Ga0193719_10075888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1460	Open in IMG/M
3300021418\|Ga0193695_1007927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2071	Open in IMG/M
3300025918\|Ga0207662_10245846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300025931\|Ga0207644_11259991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300025940\|Ga0207691_11363940	Not Available	584	Open in IMG/M
3300025961\|Ga0207712_10448493	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300025972\|Ga0207668_10600157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300026089\|Ga0207648_10308578	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300026325\|Ga0209152_10016833	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2506	Open in IMG/M
3300026995\|Ga0208761_1004171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300027456\|Ga0207482_101413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	869	Open in IMG/M
3300027748\|Ga0209689_1371883	Not Available	547	Open in IMG/M
3300027907\|Ga0207428_10668878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	744	Open in IMG/M
3300028379\|Ga0268266_10613328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	1046	Open in IMG/M
3300028381\|Ga0268264_10793319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300028608\|Ga0247819_10805960	Not Available	581	Open in IMG/M
3300028707\|Ga0307291_1026962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1330	Open in IMG/M
3300028718\|Ga0307307_10047475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1251	Open in IMG/M
3300028720\|Ga0307317_10101808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300028754\|Ga0307297_10107830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300028768\|Ga0307280_10008016	All Organisms → cellular organisms → Bacteria	2800	Open in IMG/M
3300028768\|Ga0307280_10012133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acaciae	2361	Open in IMG/M
3300028782\|Ga0307306_10031983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1252	Open in IMG/M
3300028802\|Ga0307503_10187792	Not Available	969	Open in IMG/M
3300028807\|Ga0307305_10436010	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300028807\|Ga0307305_10572578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300028809\|Ga0247824_10910990	Not Available	550	Open in IMG/M
3300028811\|Ga0307292_10001822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	7366	Open in IMG/M
3300028811\|Ga0307292_10304129	Not Available	668	Open in IMG/M
3300028814\|Ga0307302_10382444	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300028819\|Ga0307296_10100406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium neoaurum	1550	Open in IMG/M
3300028819\|Ga0307296_10455902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300028819\|Ga0307296_10673920	Not Available	565	Open in IMG/M
3300028828\|Ga0307312_10127974	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1596	Open in IMG/M
3300028828\|Ga0307312_10336365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	986	Open in IMG/M
3300028875\|Ga0307289_10131158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1028	Open in IMG/M
3300028876\|Ga0307286_10265983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300028878\|Ga0307278_10101756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1292	Open in IMG/M
3300028880\|Ga0307300_10331264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300028881\|Ga0307277_10000038	All Organisms → cellular organisms → Bacteria	37971	Open in IMG/M
3300028884\|Ga0307308_10142229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1148	Open in IMG/M
3300028889\|Ga0247827_10040596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2074	Open in IMG/M
3300030336\|Ga0247826_10295073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1159	Open in IMG/M
3300031152\|Ga0307501_10207667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300031170\|Ga0307498_10019410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium triplex	1526	Open in IMG/M
3300031226\|Ga0307497_10255822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300031716\|Ga0310813_12116613	Not Available	532	Open in IMG/M
3300031996\|Ga0308176_10078890	All Organisms → cellular organisms → Bacteria	2818	Open in IMG/M
3300033550\|Ga0247829_10853175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	758	Open in IMG/M
3300033550\|Ga0247829_11211969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora mongoliensis	626	Open in IMG/M
3300034090\|Ga0326723_0034130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2121	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.81%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	5.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.41%
Sediment	Environmental → Aquatic → Sediment	2.96%
Freshwater	Environmental → Aquatic → Freshwater	1.48%
Marine	Environmental → Aquatic → Marine	0.74%
Peat	Environmental → Terrestrial → Peat	0.74%
Floodplain	Environmental → Terrestrial → Floodplain	0.74%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.93%
Loam	Environmental → Terrestrial → Soil → Loam	7.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.44%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	37.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.22%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.22%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.48%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.48%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.74%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.74%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Switchgrass, Maize And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Switchgrass, Maize And Miscanthus Rhizosphere	0.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2044078003	Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027456	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-E (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MGB_1514260	2044078003	Switchgrass, Maize And Miscanthus Rhizosphere	AMVLSLALAVPAHARESRTVYWVCDVPGEGEVTFVTAAEAARHGIDTANNHAGQVFYDQFGEECTVK
JGI10216J12902_10080762710	3300000956	Soil	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANTHAGQVFTTKFGEVCTVN*
JGI10216J12902_1039611433	3300000956	Soil	MKHRALALLGATALSLVTVLPASGAVEKSVRWVCDVPGEGLVVFVGAPEAARHGLETANLHAGMTFNRQFGEVCVVE*
A30PFW6_10065292	3300001361	Permafrost	MKRLFITAVAAIVLTLTLTIPAQAGVPRTVHWVCDVPDVGLVTFVTAAEAARHGINTANNRAGQVFYDQFGEVCTVV*
Ga0062589_1001183952	3300004156	Soil	MKRLLGTVGAAIVLTLTPIIPAHAGVPRTVRWVCDVPDVGSVVFVTAAEAARHGIDTANTHAGQTFADRFGEECTVK*
Ga0062590_1004685052	3300004157	Soil	MKRIIRTAVAAIVLTLALAMPAQARQSRTVYWVCDVPGEGLVTFVTAAEAARHGINTANDHAGQVFLNKFGEVCTVM*
Ga0063356_1000154623	3300004463	Arabidopsis Thaliana Rhizosphere	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCEVPDVGRVVFVTAAEKARNGIETANAHAGQTFAARFGEVCTVE*
Ga0063356_1021954562	3300004463	Arabidopsis Thaliana Rhizosphere	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANAHAGQVFTTKFGEVCTVN*
Ga0062595_1010283092	3300004479	Soil	MRRSGIALLTSILLAAILAVPAHAGQPRTTLWVCEVPGEGTVVFVTAAEAARHGFTNANSHAGQTFHLRFGEVCTVE*
Ga0062595_1013949791	3300004479	Soil	MKRAFRTVVAAMVLTLALTVPAQARQSRTVYWVCDVPGEGLVTFVTAAEAARHGIDTANNHAGQVFLNKFGEQCTVM*
Ga0066814_100003662	3300005162	Soil	MKRLLGTVVAAIVLTLTLIIPAHAGVPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFADHFGEVCTVE*
Ga0068993_100280593	3300005183	Natural And Restored Wetlands	LPSPSRLAIPTRAKPASQVRWVCIVPGEPEPVVFVTAAEAARHGIETANAHAGQVFYDQFGELCTVV*
Ga0070690_1011709141	3300005330	Switchgrass Rhizosphere	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFALHFGEVCTVE*
Ga0066388_1037766013	3300005332	Tropical Forest Soil	MKRLLATVISAAALLLAPTIAAHAGQPRTTSWVCIVPGEEEPVTFVTAAEAARHGIETANSTAGQTFADNFGESCTVE*
Ga0068868_1001948032	3300005338	Miscanthus Rhizosphere	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCEVPDVGRVVFVTAAEKARDGIETANAHAGQTFAARFGEVCTVE*
Ga0070692_103730682	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLGTVGAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAEKARDGIETANAHAGQTFAARFGEVCTVE*
Ga0070668_1018755602	3300005347	Switchgrass Rhizosphere	PMKRLLGTVVAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFALHFGEVCTVE*
Ga0070674_1000928322	3300005356	Miscanthus Rhizosphere	MKRLLGTVVAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFALHFGEVCTVE*
Ga0070701_104750972	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGINTANAHAGQVFTTKFGEVCTVN*
Ga0070700_1008214022	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLGTLVAAIVLALTVIMPAHAGAPRTVHWVCGGPDVGRVVFVTAAEAARHGIETANAHAGQTFALHFGEVCTVE*
Ga0070694_1006013302	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADHFGEKCTVE*
Ga0066689_101739942	3300005447	Soil	MKRLLKTVVAAIVLTLTLSIPAQAGVPRTVHWVCDVPGVGLVTFVTAAEAARHGIDTANDHAGQVFHDQFGEVCTVV*
Ga0066681_107328622	3300005451	Soil	MKRLFATVLAAFVLAPMLTIPAQAQVPRTVHWVCDVPGVGLVTFVTAAEAARHGIDTANDHAGQVFTDQFGEVCTVR*
Ga0070685_111177382	3300005466	Switchgrass Rhizosphere	MLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANAHAGQVFTTKFGEVCTVN*
Ga0066697_104356321	3300005540	Soil	MKRLFRTAVAAIVLTLTLALPAYAGQPRTVHWVCDVPGEGLVTFVTAAEAARHGIGTANNHAGQVFYDQFGEVCTVE*
Ga0066698_103391611	3300005558	Soil	LALVLMVPAEAASPRTVSWVCDVPGEGLVTFVSVPEAAAHGINTANATAGQVFYDQFGEVCTVVTTS*
Ga0068857_1006410872	3300005577	Corn Rhizosphere	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANAYAGQVFANQFGEVCTVN*
Ga0066903_1027408352	3300005764	Tropical Forest Soil	MKRACALLGAAVLSLVVVAPASAGQSKTVFWVCDVPGEGLVVFVDAAEAARHGIDTANTHAGQTFHDRFGEVCTVESAAP*
Ga0066903_1037658651	3300005764	Tropical Forest Soil	MRRISVGLVVSAILSLAVTVPALAGQPRTTMWVCDVPGVGRVVFVTAAEAARHGIDTANTQAGQTFADQFGESCSVE*
Ga0068858_1006968541	3300005842	Switchgrass Rhizosphere	MKRLLGTVVAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAEKARDGIETANAHAGQTFAARFGEVCTVE*
Ga0066652_1011137972	3300006046	Soil	MKRLIPTVITAAILALVLMVPAEAASPRTVSWVCDVPGEGLVTFVSVPEAAAHGINTANATAGQVFHDQFGEVCTVVTTS*
Ga0066658_100142952	3300006794	Soil	MKRLFGTGAATIVLTLSLGIPANAGVARTVIWRCVVPDVGTVDFVTVAEAARHGIDTPNNHAGQVFADQFGESCVVVPAP*
Ga0066710_1040755591	3300009012	Grasslands Soil	MGNRMKRVIRTLVAAMLLPLALAMPAQARESRTVYWVCDVPGVGEVTFVTAAEAARHGINTANDHAGQVFYDQFGEVCTVE
Ga0066710_1043513012	3300009012	Grasslands Soil	MKRLFRTAVAATVLTLTLALPAHAGQPRTVHWVCDVPGEGLVTFVTAAEAARHGIDTANNHAGQVFYDQFGEVCTVQ
Ga0105245_123864321	3300009098	Miscanthus Rhizosphere	VKRLLSTLVAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFALHFGEVCTVE*
Ga0066709_1005504791	3300009137	Grasslands Soil	MKRLFTTVLAAFVLALTLTIPAQARVPRTVHWVCDVPGVGLVTFVTAAEAARHGIDTANDHAGQVFTDQFGEVCTVR*
Ga0114129_132974502	3300009147	Populus Rhizosphere	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADHFGEKCTVA*
Ga0105248_124748301	3300009177	Switchgrass Rhizosphere	VKRLSSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGINTANAHAGQVFTTKFGEVCTVN*
Ga0134126_109663702	3300010396	Terrestrial Soil	MKRLLGTVGASIVLTLTLIIPAHARVPRTVQWVCDVPGVGSVVFVTAAEAARHGIETANAHAGQTFALHFGEVCTVE*
Ga0120152_10045089	3300012011	Permafrost	MKRLFITAVAAIVLTLTLTIPAQAGVPRTVHWVCDVPDVGLVTFVTAAEAARHGINTANNQAGQVFYDQFGEVCTVV*
Ga0120139_11775751	3300012019	Permafrost	MKRLFITAVAAIVLTLTLTIPAQAGVPRTVHWVCDVPDVGLVTFVTAAEAARHGINTANNQAGQVFYDQFGEVCTGV*
Ga0137364_106150342	3300012198	Vadose Zone Soil	MKRLFATVLAAFVLALTLTITAQARVPRTVHWVCDVPGVGLVTFVTAAEAARHGIDTANDHAGQVFTDQFGEVCTVR*
Ga0137364_110640202	3300012198	Vadose Zone Soil	MKRLLGTVVATIVLTLTLIMPAHAGVPRTVRWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADHFGEVCTVE*
Ga0137376_112431802	3300012208	Vadose Zone Soil	VKRVVRVAFAAMVLSLALAMPAHARQSRTVYWVCDVPGEGEVTFVTAAEAARHGTDTAND
Ga0157285_102246701	3300012897	Soil	MLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGISTANAHAGQVFTDKFGEVCTVN*
Ga0157286_100863942	3300012908	Soil	MLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGINTANAHAGQVFTDKFGEVCTVN*
Ga0157301_102104811	3300012911	Soil	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGINTANAHAGQVFTDKFGEVCTVN*
Ga0157306_104055071	3300012912	Soil	MKRLLGTVGAAIVLTLTPIIPAHAGVPRTVRWVCDVPDVGSVVFVTAAEAARHGIDTANAHAGQTFADRFGEECTVK*
Ga0153915_103771172	3300012931	Freshwater Wetlands	MKRIIMAAVAAMALTLTLAIPAQAGAPSTVQWVCDVPNGDGTFTTVTFVTASDAARHGIDTANNRAGQVFYDRFGEVCTVV*
Ga0164300_105902452	3300012951	Soil	MKRLLGTVVAAIVLTFTLIIPAHARVPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEVCTVE*
Ga0164300_107139002	3300012951	Soil	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGKTFALHFGEVCTVE*
Ga0164298_105346911	3300012955	Soil	MKRLLGTVVAAIVLTLTLIIPAHARVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGKTFALHFGEVCTVE*
Ga0164303_100267004	3300012957	Soil	MKRLLGTVVAATVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGKTFALHFGEVCTVE*
Ga0164303_105064852	3300012957	Soil	MKRLLGTVGAAIVLTLTLVIPAHAGVPRTTHWVCEVPDVGLVVFVTAAEKARFGIETANAHAGQTFADRFGEVCTVE*
Ga0164299_102733542	3300012958	Soil	MKRLLGTVGAAIVLTLTLVIPAHAGVPRTTHWVCEVPDVGRVVFVTAAEKARFGIETANAHAGQTFADRFGEVCTVE*
Ga0164299_105157482	3300012958	Soil	MKRLLGTVVAAIVLTFTLIIPAHARVPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAG
Ga0164301_112753472	3300012960	Soil	MKRLLGTVVAATVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADHFGEKCTVE*
Ga0164309_110431331	3300012984	Soil	MKRLLGTVGAAIVLTLTLVIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADH
Ga0164308_116895162	3300012985	Soil	MKRLLGTVGAAIVLTLTLVIPAHAGVPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFALHFGEVCTVE*
Ga0164307_100151705	3300012987	Soil	MKRLLGTVVAAIVLTLTLIMPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGKTFALHFGEVCTVE*
Ga0164305_100145495	3300012989	Soil	MKRLLGTVVAAIVLTFTLIIPAHARVPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQ
Ga0164305_122010472	3300012989	Soil	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCEVPDVGSVVFVTAAEAARHGIETANAHAGQTFALHFGEVCTVE
Ga0157375_102887502	3300013308	Miscanthus Rhizosphere	MKRLLGTVVAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEVCTVE*
Ga0163163_106924872	3300014325	Switchgrass Rhizosphere	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANAHAGQVFTTKFGEACTVN*
Ga0157380_106098101	3300014326	Switchgrass Rhizosphere	MKRLLGTVGAAIVLTLTLVIPAHAGVPRTTHWVCEVPDVGRVVFVTAAEKARHGIETANAHAGQTFADRFGEVCTVE*
Ga0157380_119532502	3300014326	Switchgrass Rhizosphere	VKRLSSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGINTANAHAGQVFTNKFGEVCTVN*
Ga0157379_118693371	3300014968	Switchgrass Rhizosphere	MMHTQRWEDAMTRKTLALLGAVGLSLSLAGSVVAGQPRTVSWVCDVPGEGLVVFVTAAEAARHGIDTANSLAGQTFHLRFGE
Ga0132258_106901634	3300015371	Arabidopsis Rhizosphere	MKRLTSTIAVAIALTLSLAIPSQAKPASQVQWVCIVPGEPEPVVFVTAAEAARHGIDTANAHAGQVFYDQFGELCTVV*
Ga0132256_1030798701	3300015372	Arabidopsis Rhizosphere	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANAHAGQVFANKFGEVCTVN*
Ga0132257_1012939621	3300015373	Arabidopsis Rhizosphere	MKRLTSTIAVAIALTLSLAIPSQAKPASQVQWVCIVPGEPEPVVFVTAAEAARHGIDTANAHADQVFYDQFGELCTVV*
Ga0163161_119198892	3300017792	Switchgrass Rhizosphere	WEDAMTRKTLALLGAVGLSLSLAGSVVAGQPRTVSWVCDVPGEGLVVFVTAAEAARHGIDTANSLAGQTFHLRFGEVCTVE
Ga0184605_100133903	3300018027	Groundwater Sediment	MKRLLGTVVAAIVLTLTLIMPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEVCTVE
Ga0184605_104469822	3300018027	Groundwater Sediment	RRVGSPQREGPPLKLFRTLVAAIVLTLALTIPAQAGVPRTVHWVCDVPDVGLVTFVTAAEAARHGINTANNQAGQVFNDRFGEVCTVV
Ga0184621_100032332	3300018054	Groundwater Sediment	MKRLLGTVVAAIVLTLTLIMPAHAGVPRTVHWVCDVPDVGRVVFATAAEAARHGIETANAHAGQTFADRFGEVCTVE
Ga0184619_100017728	3300018061	Groundwater Sediment	MKRLLGTVVAAIVLTLTLIMPAHAGVSRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEVCTVE
Ga0066662_120222851	3300018468	Grasslands Soil	MKRVFRTAIAAMALTLTLAIPAHAGQPRTVHWVCDVPGEGLVTFVTAAEAARHGINTANDQAGQVFYDQFGEVCTVE
Ga0066662_124471472	3300018468	Grasslands Soil	MKRLLKTVVAAIVLTLTLSIPAQAGVPRTVHWVCDVPGVGLVTFVTAAEAARHGIDTANDHAGQVFHDQFGEVCTVV
Ga0066669_109597772	3300018482	Grasslands Soil	MKRLFATVLAAFVLALTLTIPAQARVPRTVHWVCDVPGVGLVTFVTAAEAARHGIDTANDHAGQVFTDQFGEVCTVR
Ga0173481_101001772	3300019356	Soil	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGINTANAHAGQVFTDKFGEVCTVN
Ga0173479_105425701	3300019362	Soil	MKRLLGTVGAAIVLTLTPIIPAHAGVPRTVRWVCDVPDVGSVVFVTAAEAARHGIDTANTHAGQTFADRFGEECTVK
Ga0190267_108836692	3300019767	Soil	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANAHAGQVFTTKFGEVCTVT
Ga0193705_10507542	3300019869	Soil	MKRLLGTVVAAIVLTLTLIMPAHAGVPRAVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEVCTVE
Ga0210382_101655372	3300021080	Groundwater Sediment	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIDTANAHAGQTFADRFGEVCTVE
Ga0193719_100758882	3300021344	Soil	MKRLLGTVVAAIVLTLTLIMPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFTDRFGEVCTVE
Ga0193695_10079272	3300021418	Soil	MKRLLGTVVTAIVLTLTLIMPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADHFGEVCTVE
Ga0207662_102458462	3300025918	Switchgrass Rhizosphere	MKRLLGTVVAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFALHFGEVCTVE
Ga0207644_112599911	3300025931	Switchgrass Rhizosphere	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFA
Ga0207691_113639402	3300025940	Miscanthus Rhizosphere	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANAHAGQVFTTKFGEVCTVN
Ga0207712_104484932	3300025961	Switchgrass Rhizosphere	MKRLLGTVVAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAG
Ga0207668_106001571	3300025972	Switchgrass Rhizosphere	PMKRLLGTVVAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFALHFGEVCTVE
Ga0207648_103085781	3300026089	Miscanthus Rhizosphere	MKRLLGTVVAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAQAGRHGIETATAHAVQTFALHFGEVC
Ga0209152_100168333	3300026325	Soil	MKRLFGTGAATIVLTLSLGIPANAGVARTVIWRCVVPDVGTVDFVTVAEAARHGIDTPNNHAGQVFADQFGESCVVVPAP
Ga0208761_10041712	3300026995	Soil	MKRLLGTVVAAIVLTLTLIIPAHAGVPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFADHFGEVCTVE
Ga0207482_1014132	3300027456	Soil	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCEVPDVGRVVFVTAAEKARNGIETANAHAGQTFAARFGEVCTVE
Ga0209689_13718832	3300027748	Soil	MKRVFRTAITAIALTLTLAIPAHAGQPRTVHWVCDVPGEGLVTFVTAAEAARHGINTANDHAGQVFYDQFG
Ga0207428_106688782	3300027907	Populus Rhizosphere	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGINTANAHAGQVFTTKFGEVCTVN
Ga0268266_106133281	3300028379	Switchgrass Rhizosphere	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANAHAGQVFTTKF
Ga0268264_107933192	3300028381	Switchgrass Rhizosphere	MKRLLGTVVAAIVLTLTLIMPAHAGAPRTVHWVCEVPDVGRVVFVTAAEAARHGIETANAHAGQTFADHFGEKCTVE
Ga0247819_108059601	3300028608	Soil	MKRLLGTVVVATTLAAAASLPAQAAQPRSVHWVCDVPGEGLVTFVTAAEAARHGIETANAHAGQTFLNNFGEVCTVD
Ga0307291_10269621	3300028707	Soil	MKRLLGTVVAAIVLTLTLIIPAHAGVSRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEVCTVE
Ga0307307_100474752	3300028718	Soil	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCEVPDVGRVVFVTAAEKARQGIETANAHAGQTFAARFGEVCTVE
Ga0307317_101018081	3300028720	Soil	MKRLLGTVVAAIVLTLTLIMPAHAGVSRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRF
Ga0307297_101078302	3300028754	Soil	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEECTVK
Ga0307280_100080164	3300028768	Soil	MKRLLGTVVAAIVLTLTLIMPAHAGVPRTVRWVCDVPDVGSVAFVTAAEAARHGIDTANAHAGQTFADRFGEECTVK
Ga0307280_100121331	3300028768	Soil	MKRLLGTVVAAIVLTLTLIMPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRF
Ga0307306_100319831	3300028782	Soil	GAAIVLTLTLIIPASAGVPRTVRWVCDVPDVGRVVFVTAAEAARHGIDTANAHAGQTFADRFGEVCTVE
Ga0307503_101877922	3300028802	Soil	MNRFIRTAAVAFGLTLTFATSAQAKPPNTVQWVCQVPGVLEPEVFVTAAEAARHGIDTANNHAGQVFLSQFGEVCTVV
Ga0307305_104360102	3300028807	Soil	AIVLTLTLIMPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFDEVCTVE
Ga0307305_105725782	3300028807	Soil	MKLFRTVVAAIVLTLALTIPAQAGVPRTVHWVCDVPDVGLVTFVTAAEAARHGINTANNHAGQVFNDRFGEVC
Ga0247824_109109902	3300028809	Soil	VKRLLSTLVAAIVLTLTLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANAHAGQVFANKFGEVCTVN
Ga0307292_100018221	3300028811	Soil	MKRLLGTVVAAIVLTLTLIMPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFDEVCTVE
Ga0307292_103041292	3300028811	Soil	AIVLTLTLIMPAHAGVPRAVHWVCDVPDVGRVVFVTAAEAARQGIETANAHAGQTFADRFGEVCTVE
Ga0307302_103824442	3300028814	Soil	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIDTANAHAGQTFADRFGEVC
Ga0307296_101004063	3300028819	Soil	MKRLLGTVVAAIVLTLTLIMPAHAGVPRTVRWVCDVPDVGSVAFVTAAEAARHGIDTANAHAGQTFADRFGEE
Ga0307296_104559021	3300028819	Soil	MKRLLGTVVAAIVLTLTLIIPAHAGVPRTVHWVCEVPDVGRVVFVTAAEKARQGIETANAHAGQTFAARFGEVCTVE
Ga0307296_106739201	3300028819	Soil	MKRLSRTVVAAIVLTLTFTIPAQAGVPRTVHWVCDVPDVGLVTFVTAAEAARHGIDTANDHAGQVFSDQFGEVCTVI
Ga0307312_101279742	3300028828	Soil	MKLFITVVAAIVLTLALTIPAQAGVPRTVRWVCDVPDVGLVTFVTAAEAARHGINTANNQAGQVFNDRFGEVCTVV
Ga0307312_103363652	3300028828	Soil	MKRLLGTLVAAIVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEVCTVE
Ga0307289_101311581	3300028875	Soil	PMKRLLGTVVAAIVLTLTLIMPAHAGVPRTVRWVCDVPDVGSVAFVTAAEAARHGIDTANAHAGQTFADRFGEECTVK
Ga0307286_102659832	3300028876	Soil	TLTLIMPAHAGVPRAVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEVCTVE
Ga0307278_101017562	3300028878	Soil	MKRLLGTVVAAIVLTLTPIMPAHAGVPRTVHWVCEVPDVGRVVFVTAAEAARRGIETANAHAGQTFADHFGEVCTVE
Ga0307300_103312642	3300028880	Soil	MKRLLGTVVAAIVLTLTLIMPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIDTANAHAGQTFADRFGEVCTVE
Ga0307277_100000382	3300028881	Soil	MKRLLGTVGAAIVLTLTLIIPAHAGVPRTVPWVCDVPDVGRVVFVTAAEAARHGIDTANAHAGQTFADRFGEVCTVE
Ga0307308_101422292	3300028884	Soil	MKLFRTVVAAIVLTLALTIPAQAGVPRTVHWVCDVPDVGLVTFVTAAEAARHGINTANNHAGQVFNDRFGEVCTVV
Ga0247827_100405962	3300028889	Soil	MKRLLGTVVAAIVLTLTLIIPAHAGVPRTVHWVCDVPDVGRVVFVTAAAAARHGIETANAHAGQTFADRFGEVCTVE
Ga0247826_102950732	3300030336	Soil	MKRLLGTVVAAIVLTLTLIIPAHAGVPRSVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADRFGEVCTVE
Ga0307501_102076672	3300031152	Soil	LGTVVAAIVLTLTLIMPAHAGVQRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADHFGEVCTVE
Ga0307498_100194103	3300031170	Soil	MKRVIRTTVAAIVLTLALAMPAQARQSRTVYWICDVPNEGLVTFVTAAEAARHGIDTANAYAGQVFFDKFGEQCTVM
Ga0307497_102558222	3300031226	Soil	MKRLLGTVVAAIVLTFTIIMPAHAGVPRTVHWVCDVPDVGRVVFVTAAEAARHGIETANAHAGQTFADHFGEVCTVE
Ga0310813_121166132	3300031716	Soil	AIVLTLALTTPAQAGQSRTVYWVCDVPGEGLVTFVTAAEAARHGIDTANDHAGQTFYDRFGEVCTVM
Ga0308176_100788902	3300031996	Soil	MKRLVSTIIASALLPLALMMPAHAAGTRGAVSWVCDVPGEGPVTFVAAPFAAAHGINTANRTAGQTFHDRFGEVCTVVVAS
Ga0247829_108531752	3300033550	Soil	MKRLLGTVGAAIVLTLTLVIPAHAGVPRTTHWVCEVPDVGRVVFVTAAEKARFGIETANAHAGQTFADRFGEVCTVE
Ga0247829_112119691	3300033550	Soil	VKRLLSTLVAAIVLTLSLTIPAQAGQPRTVFWVCDVPNEGLVTFVTAAEAARHGIDTANAHAGQVFANKFGEV
Ga0326723_0034130_1860_2102	3300034090	Peat Soil	MKRLIKAVVATTVLSLALTVPAQARAPRTVIWRCDVPNVGTVDFVTAAEAAGHGIDTANAHAGQVFADRFGESSRVVPAP
Ga0364941_103799_491_682	3300034417	Sediment	LSLSLVAPAFAGQPRTVLWVCDVPDEGLVIFVTAAEAARHGISQADAHAGEVFASHFGEDCTV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F058549

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences