Metagenome / Metatranscriptome Family F058495

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058495
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	62 residues
Representative Sequence	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAPAEPARS
Number of Associated Samples	109
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.42 %
% of genes near scaffold ends (potentially truncated)	38.52 %
% of genes from short scaffolds (< 2000 bps)	75.56 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.630 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (14.074 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.15% β-sheet: 0.00% Coil/Unstructured: 53.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF07729	FCD	11.11
PF00005	ABC_tran	6.67
PF12399	BCA_ABC_TP_C	2.96
PF10397	ADSL_C	2.22
PF02653	BPD_transp_2	1.48
PF03401	TctC	0.74
PF09851	SHOCT	0.74
PF07992	Pyr_redox_2	0.74
PF00206	Lyase_1	0.74
PF13458	Peripla_BP_6	0.74
PF00723	Glyco_hydro_15	0.74
PF05598	DUF772	0.74
PF07681	DoxX	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	11.11
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	11.11
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.74
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.74
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.74
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.63 %
Unclassified	root	N/A	30.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.63 %
Unclassified	root	N/A	30.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.63 %
Unclassified	root	N/A	30.37 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.93 %
Unclassified	root	N/A	30.37 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.78 %
Unclassified	root	N/A	30.37 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.37 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	29.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.81 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	8.89 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.48 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.74 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.74 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	8.89 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.48 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.74 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	8.89 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.48 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.74 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	8.89 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.48 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	0.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.74 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.74 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100081394	Not Available	1097	Open in IMG/M
3300000956\|JGI10216J12902_107021848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300001867\|JGI12627J18819_10418438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	546	Open in IMG/M
3300002906\|JGI25614J43888_10133468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300004268\|Ga0066398_10013200	Not Available	1262	Open in IMG/M
3300004479\|Ga0062595_100078897	Not Available	1655	Open in IMG/M
3300004633\|Ga0066395_10013399	All Organisms → cellular organisms → Bacteria → Proteobacteria	3099	Open in IMG/M
3300004633\|Ga0066395_10179015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1095	Open in IMG/M
3300004633\|Ga0066395_10484236	Not Available	710	Open in IMG/M
3300005172\|Ga0066683_10070999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2085	Open in IMG/M
3300005172\|Ga0066683_10377023	Not Available	879	Open in IMG/M
3300005179\|Ga0066684_10532035	Not Available	788	Open in IMG/M
3300005180\|Ga0066685_10011741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4946	Open in IMG/M
3300005187\|Ga0066675_10088222	All Organisms → cellular organisms → Bacteria → Proteobacteria	2019	Open in IMG/M
3300005332\|Ga0066388_100497589	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300005332\|Ga0066388_101728760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1108	Open in IMG/M
3300005332\|Ga0066388_101988821	Not Available	1041	Open in IMG/M
3300005332\|Ga0066388_102723539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	902	Open in IMG/M
3300005332\|Ga0066388_103106145	Not Available	848	Open in IMG/M
3300005332\|Ga0066388_103352005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	818	Open in IMG/M
3300005363\|Ga0008090_10243979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300005363\|Ga0008090_15859552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	557	Open in IMG/M
3300005434\|Ga0070709_10078899	All Organisms → cellular organisms → Bacteria → Proteobacteria	2143	Open in IMG/M
3300005467\|Ga0070706_100618826	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300005555\|Ga0066692_10854599	Not Available	558	Open in IMG/M
3300005569\|Ga0066705_10746135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	587	Open in IMG/M
3300005574\|Ga0066694_10565459	Not Available	530	Open in IMG/M
3300005578\|Ga0068854_101265276	Not Available	663	Open in IMG/M
3300005713\|Ga0066905_101307318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	653	Open in IMG/M
3300005713\|Ga0066905_101585941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300005713\|Ga0066905_101810075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	563	Open in IMG/M
3300005713\|Ga0066905_101866677	Not Available	555	Open in IMG/M
3300005764\|Ga0066903_104572135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300005764\|Ga0066903_105079432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300005764\|Ga0066903_106923933	Not Available	588	Open in IMG/M
3300005937\|Ga0081455_10246840	Not Available	1308	Open in IMG/M
3300005983\|Ga0081540_1019759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	4080	Open in IMG/M
3300006032\|Ga0066696_10007648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5080	Open in IMG/M
3300006032\|Ga0066696_10840984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300006038\|Ga0075365_10263813	Not Available	1211	Open in IMG/M
3300006049\|Ga0075417_10580876	Not Available	569	Open in IMG/M
3300006051\|Ga0075364_10660077	Not Available	714	Open in IMG/M
3300006058\|Ga0075432_10240723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300006163\|Ga0070715_10023417	All Organisms → cellular organisms → Bacteria → Proteobacteria	2419	Open in IMG/M
3300006172\|Ga0075018_10297740	Not Available	795	Open in IMG/M
3300006175\|Ga0070712_101440273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300006175\|Ga0070712_101466988	Not Available	596	Open in IMG/M
3300006606\|Ga0074062_12929621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300006844\|Ga0075428_100079948	All Organisms → cellular organisms → Bacteria → Proteobacteria	3568	Open in IMG/M
3300006852\|Ga0075433_10196551	All Organisms → cellular organisms → Bacteria → Proteobacteria	1794	Open in IMG/M
3300006871\|Ga0075434_100526341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1203	Open in IMG/M
3300007255\|Ga0099791_10246933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	846	Open in IMG/M
3300009088\|Ga0099830_10246964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1411	Open in IMG/M
3300009147\|Ga0114129_10007345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15684	Open in IMG/M
3300009792\|Ga0126374_10010968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3571	Open in IMG/M
3300010043\|Ga0126380_10027542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2826	Open in IMG/M
3300010043\|Ga0126380_10357550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1066	Open in IMG/M
3300010043\|Ga0126380_12304598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300010047\|Ga0126382_10531997	Not Available	952	Open in IMG/M
3300010321\|Ga0134067_10025944	Not Available	1793	Open in IMG/M
3300010337\|Ga0134062_10302966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300010358\|Ga0126370_10015723	All Organisms → cellular organisms → Bacteria → Proteobacteria	4218	Open in IMG/M
3300010358\|Ga0126370_11602418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300010359\|Ga0126376_12147513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300010361\|Ga0126378_11851312	Not Available	687	Open in IMG/M
3300010373\|Ga0134128_12311227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	592	Open in IMG/M
3300010376\|Ga0126381_100006371	All Organisms → cellular organisms → Bacteria → Proteobacteria	13046	Open in IMG/M
3300010403\|Ga0134123_12217921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	611	Open in IMG/M
3300012079\|Ga0153918_1057929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300012189\|Ga0137388_10114194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2342	Open in IMG/M
3300012198\|Ga0137364_10000031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	39216	Open in IMG/M
3300012200\|Ga0137382_10797788	Not Available	679	Open in IMG/M
3300012202\|Ga0137363_10773942	Not Available	814	Open in IMG/M
3300012204\|Ga0137374_10075748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3287	Open in IMG/M
3300012224\|Ga0134028_1294173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1488	Open in IMG/M
3300012403\|Ga0134049_1319476	Not Available	1270	Open in IMG/M
3300012404\|Ga0134024_1004042	Not Available	639	Open in IMG/M
3300012948\|Ga0126375_11677832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300012957\|Ga0164303_10059256	Not Available	1737	Open in IMG/M
3300012961\|Ga0164302_10339338	Not Available	999	Open in IMG/M
3300012975\|Ga0134110_10261330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300012984\|Ga0164309_10121019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1691	Open in IMG/M
3300012986\|Ga0164304_10252696	Not Available	1183	Open in IMG/M
3300012989\|Ga0164305_10270816	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300015372\|Ga0132256_102914041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300016319\|Ga0182033_11156891	Not Available	692	Open in IMG/M
3300016357\|Ga0182032_11836425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	530	Open in IMG/M
3300016422\|Ga0182039_10476939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1074	Open in IMG/M
3300018431\|Ga0066655_10151046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1379	Open in IMG/M
3300018433\|Ga0066667_10078986	All Organisms → cellular organisms → Bacteria → Proteobacteria	2113	Open in IMG/M
3300018468\|Ga0066662_12251082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300020579\|Ga0210407_10143922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1834	Open in IMG/M
3300020579\|Ga0210407_11380691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300020580\|Ga0210403_11074439	Not Available	626	Open in IMG/M
3300021475\|Ga0210392_10770343	Not Available	718	Open in IMG/M
3300021479\|Ga0210410_11805845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300021560\|Ga0126371_10049153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4032	Open in IMG/M
3300021560\|Ga0126371_10569054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1282	Open in IMG/M
3300021560\|Ga0126371_11208141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300025905\|Ga0207685_10024615	Not Available	2067	Open in IMG/M
3300025910\|Ga0207684_10133091	Not Available	2134	Open in IMG/M
3300026306\|Ga0209468_1167520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300026308\|Ga0209265_1034485	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300026329\|Ga0209375_1036835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2577	Open in IMG/M
3300026351\|Ga0257170_1054234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300026494\|Ga0257159_1059426	Not Available	653	Open in IMG/M
3300026552\|Ga0209577_10261491	All Organisms → cellular organisms → Bacteria → Proteobacteria	1303	Open in IMG/M
3300027646\|Ga0209466_1004986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2786	Open in IMG/M
3300027907\|Ga0207428_10386097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1027	Open in IMG/M
3300028720\|Ga0307317_10347200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300028768\|Ga0307280_10321477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300028784\|Ga0307282_10024050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2587	Open in IMG/M
3300028787\|Ga0307323_10232145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300028799\|Ga0307284_10322052	Not Available	623	Open in IMG/M
3300028881\|Ga0307277_10000074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29802	Open in IMG/M
3300031546\|Ga0318538_10535007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300031573\|Ga0310915_11008974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	580	Open in IMG/M
3300031679\|Ga0318561_10322055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	846	Open in IMG/M
3300031720\|Ga0307469_10018391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3717	Open in IMG/M
3300031744\|Ga0306918_10091656	Not Available	2141	Open in IMG/M
3300031777\|Ga0318543_10000278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11777	Open in IMG/M
3300031781\|Ga0318547_10557884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	709	Open in IMG/M
3300031794\|Ga0318503_10047864	All Organisms → cellular organisms → Bacteria → Proteobacteria	1296	Open in IMG/M
3300031795\|Ga0318557_10132485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1120	Open in IMG/M
3300031835\|Ga0318517_10159418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1010	Open in IMG/M
3300031890\|Ga0306925_10752256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1015	Open in IMG/M
3300031894\|Ga0318522_10009994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2833	Open in IMG/M
3300031942\|Ga0310916_10691282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	863	Open in IMG/M
3300032009\|Ga0318563_10355941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300032091\|Ga0318577_10035333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2183	Open in IMG/M
3300032180\|Ga0307471_101397052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	860	Open in IMG/M
3300032180\|Ga0307471_101624250	Not Available	802	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.63%
Host-Associated	Host-Associated	10.37%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Plants	Host-Associated → Plants	9.63%
Aquatic	Environmental → Aquatic	0.74%
Fungi	Host-Associated → Fungi	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.22%
Roots	Host-Associated → Plants → Roots	1.48%
Sediment	Environmental → Aquatic → Sediment	0.74%
Mycelium	Host-Associated → Fungi → Mycelium	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.89%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.22%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.22%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.48%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.48%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.48%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.48%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012079	Attine ant fungus gardens microbial communities from Florida, USA - TSFL002 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1000813942	3300000956	Soil	MSYVKYCQVQAAECARRAKLASSPELAAERRTLGLRWLKLAEKARAAALSRPSQPEMALPRGRP*
JGI10216J12902_1070218481	3300000956	Soil	MSSYVMYCRAQAAECARRAKLASSPELATERRNLGLRWLRLAEKAKATPLGRVRDAAPTAPVERR*
JGI12627J18819_104184381	3300001867	Forest Soil	MSSYVMYCRAQAAECARRVKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPAARA
JGI25614J43888_101334681	3300002906	Grasslands Soil	MSSYVKYCKAQAVECARRAKLASSPELAAERRSLGLRWLKLAEKAKATPLGRPREVESAALGVRP*
Ga0066398_100132002	3300004268	Tropical Forest Soil	MSSYVKYCHVQAAECARRAKLASSPELAAERRNLGLRWLKLAEKARAAPLSRPPQPETGRS*
Ga0062595_1000788973	3300004479	Soil	MSSYVMYCRAQAAECARRVKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAARAARA*
Ga0066395_100133994	3300004633	Tropical Forest Soil	MSSYVKYCQVQAAECARRAKLASSPELAAERRSLGLRWLKLAEKARAAPLSRPPQPETGRS*
Ga0066395_101790151	3300004633	Tropical Forest Soil	MSSYVRYCRDQAAECARRARLASSPQIAAERRSLGLRWLKLAEKAQAAPFGRTSKPDTATGAARP*
Ga0066395_104842362	3300004633	Tropical Forest Soil	MYCRAQAVECARRAKLASSPEVAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAAPAARP
Ga0066683_100709995	3300005172	Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVESTAQGIRP*
Ga0066683_103770232	3300005172	Soil	VMSSYVKYCKAQAAECARRAKLASSPELAAERSSLGLRWLKLAEKAQATPLGRPREAESTAQSIRP*
Ga0066684_105320351	3300005179	Soil	MSSYVKYCKVQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVESTAQGIRP*
Ga0066685_100117415	3300005180	Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVESAAQGIRP*
Ga0066675_100882221	3300005187	Soil	MSSYVMYCRAQAAECARRAKLASSPELATERRNLGLRWLRLAEKAKATPLNRVREPAPKP
Ga0066388_1004975892	3300005332	Tropical Forest Soil	MSSYVMYCRAQAVECARRAKLASSPEVAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAAPAARP*
Ga0066388_1017287603	3300005332	Tropical Forest Soil	MSSYVMYCRAQAAECARRAKLASSPELATERRNLGLRWLRLAERAKATLLNRVREPAPRA
Ga0066388_1019888212	3300005332	Tropical Forest Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRNLGLRWLRLAQKAKATPLGRMPESAPPAHPARS*
Ga0066388_1027235392	3300005332	Tropical Forest Soil	MSYVKYCQAQAAECARRAKLASSPELAAERRTLGLRWLKLAEKARAAPLSRPPQPETGRS
Ga0066388_1031061452	3300005332	Tropical Forest Soil	MSSYVMYCRAQAAECARRAKMASSPELATERRNLGLRWLRLAEKAKATPLNRAREPAPKA
Ga0066388_1033520051	3300005332	Tropical Forest Soil	MSSYVMYCRAQAAECARRAKLASSPELATERRNLGLRWLRLAEKAKATPLNRVREPAPKA
Ga0008090_102439791	3300005363	Tropical Rainforest Soil	MSSYVMYCRAQAVECARRAKLASSPEVAASQRSLGLRWLRLAQKAQAAPFGRTSKPEPAAPAARP*
Ga0008090_158595521	3300005363	Tropical Rainforest Soil	MYCRVQAAECARRAKLASSPEVAASHRSLGLRWLRLAEKAQAAPFGRTSKPE
Ga0070709_100788992	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAPAEQTERR*
Ga0070706_1006188262	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MYCRAQAAECARRAKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAIRAARP
Ga0066692_108545991	3300005555	Soil	VMSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVESAAQGIRP*
Ga0066705_107461351	3300005569	Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGR
Ga0066694_105654591	3300005574	Soil	VQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREAESIAHGVRP*
Ga0068854_1012652762	3300005578	Corn Rhizosphere	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGQRWLRLAQKAKGDAPGLTPAAPAEQAERR*
Ga0066905_1013073182	3300005713	Tropical Forest Soil	MSSYVMYCRAQAVECARRARLASSPEVAASHHSLGLRWLRLAEKAQAAPFGRTSKPE
Ga0066905_1013670542	3300005713	Tropical Forest Soil	MYCLAQAAECARRAKLASSPEIAAERRALGLRWLRLAERAKAGGRMPSSARTD*
Ga0066905_1015859412	3300005713	Tropical Forest Soil	MSSYVMYCRAQAAECARRTKLASSPEIAASHRSLGLRWLRLAEKAQASPFGRTSKSESAAQVARP*
Ga0066905_1018100752	3300005713	Tropical Forest Soil	MSSYVRYCRDQAAECARRAKLASSPEIAAHRRSLGLRWLRLAEKAKAAPFGQTSKPPSAVGATRF*
Ga0066905_1018666771	3300005713	Tropical Forest Soil	AQAAECARRAKLASSPEVAASCRSLGLRWLRLAEKAQAAPFGRTRKPAALAARS*
Ga0066903_1045721352	3300005764	Tropical Forest Soil	MSSYVMYCRAQAVECARRAKLASSPEVAASQRSLGLRWLKLAQKAQAAPFGRTSKPEPAAPAARP*
Ga0066903_1050794322	3300005764	Tropical Forest Soil	MSSYVMYCRAQAVECARRAKLASSPEVAASQRSLGLRWLRLAEKAQAAPFGRTSKPEPAAPAARP*
Ga0066903_1069239331	3300005764	Tropical Forest Soil	SYVKYCQVQAAECARRAKLASSPELAAERRSLGLRWLKLAEKARAAPLSRPPQPETGRS*
Ga0081455_102468401	3300005937	Tabebuia Heterophylla Rhizosphere	MYCRAQAAECARRAKLASSPEVAASHRSLGLRWLRLAEKAQATPFGRTSKPEPAALAARA
Ga0081540_10197591	3300005983	Tabebuia Heterophylla Rhizosphere	MSSYMMYCRAQAAECARRAKLASTPELATERRNLGLRWLRLAEKAKTAAFGRTREPATPAVQAERR*
Ga0066696_100076484	3300006032	Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREAESIAHGVRP*
Ga0066696_108409841	3300006032	Soil	MSTYVMYCRAQAAECARRAKLASSPELATERRNLGLRWLRLAEKAKATPLNRVREPA
Ga0075365_102638132	3300006038	Populus Endosphere	MSSYVMYCRAQAAECVRRAKLASSPELAAERRNLGLRWLRLAQKAKATPLGRVREPAPAAQAERR*
Ga0075417_105808761	3300006049	Populus Rhizosphere	AGRVVLERAMSSYVMYCRAQAAECARRVKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAARAARA*
Ga0075364_106600771	3300006051	Populus Endosphere	LAMCVCVRERVMSSYVMYCRAQAAECVRRAKLASSPELAAERRNLGLRWLRLAQKAKATPLGRVREPAPAAQAERR*
Ga0075432_102407233	3300006058	Populus Rhizosphere	MSSYVMYCRAQAAECVRRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRVREAAPAAQAERR*
Ga0070715_100234171	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGQRWLRLAQKAKATPLGRTPAAPAEQTERR*
Ga0075018_102977402	3300006172	Watersheds	AMCERVMSSYVKYCKAQAVECARRAKLASSPELAAERRSLGLRWLKLAEKAKATPLGRPREVESAA*
Ga0070712_1014402731	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VMYCRAQAAECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRVREPAPAAQAERR*
Ga0070712_1014669882	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSSYVIYCRAQAAECARRAKLASSPELAAERRNLGLRWLRLAQKAKATPFGRTPAAPAAQAERR*
Ga0074062_129296212	3300006606	Soil	MSSYVMYCRAQAAECARRVKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAAPAARP*
Ga0075428_1000799482	3300006844	Populus Rhizosphere	MYCLAQAAECARRAKLASSPQIAAERRALGLRWLRLAEKARASGRMRDPSSAGQTARLAPAR*
Ga0075433_101965514	3300006852	Populus Rhizosphere	MSSYVMYCRAQAAECARRVKLASSPEIAANHRSLGLRWLRLAEKAQAAPFGGTSKPEPAARAARP*
Ga0075434_1005263413	3300006871	Populus Rhizosphere	MCVCVRERVMSSYVMYCRAQAAECVRRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRVREAAPAAQAERR*
Ga0099791_102469332	3300007255	Vadose Zone Soil	MSSYVKYCKAQAVECARRAKLASSPELAAERRSLGLRWLKLAEKAKATPLGRPREVESAALGVRS*
Ga0099830_102469641	3300009088	Vadose Zone Soil	QAAECARRVKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAAQAARP*
Ga0114129_100073453	3300009147	Populus Rhizosphere	MYCLAQAAECARRAKLASSPQIAAERRALGLRWLRLAEKARASGRMRDPSSAGQTA*
Ga0126374_100109683	3300009792	Tropical Forest Soil	MSSYVKYCHVQAAECARRAKLASSPELAAERRNLGLRWLKLAEKARAAPLSRPPQPETGRSCS*
Ga0126380_100275423	3300010043	Tropical Forest Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRNLGLRWLRLAQKAEATPLGRMPESAPPAHPARS*
Ga0126380_103575502	3300010043	Tropical Forest Soil	MSSYVRYCRDQAAECARRAKLASSPQIAAERRSLGLRWLRLAEKAQAAPFGRTSKPDTATAAARP*
Ga0126380_123045981	3300010043	Tropical Forest Soil	MSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAKATPLGRSREAESVAQ
Ga0126382_105319972	3300010047	Tropical Forest Soil	MYCRAQAAECARRAKLASSPEIAASRRSLGLRWLRLAEKAQAAPFGRTSKPGSAARP*
Ga0134067_100259442	3300010321	Grasslands Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREAESTAQSIRP*
Ga0134062_103029661	3300010337	Grasslands Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVESTAHGVRP*
Ga0126370_100157235	3300010358	Tropical Forest Soil	MSSYVKYCQVQAAECARRAKLASSPELAAERRNLGLRWLKLAEKARAAPLSRPPQPETGRS*
Ga0126370_116024181	3300010358	Tropical Forest Soil	MSSYVMYCRAQAAECARRAKLASWPELATERRNLGLRWLRLAEKAKATPLNRVREPAPKA
Ga0126376_121475131	3300010359	Tropical Forest Soil	MSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAKATPLGRSREAESVAQGLRP*
Ga0126378_118513121	3300010361	Tropical Forest Soil	MSSYARYCRDQAAECARRAKLASSPQIAAERRSLGLRWLKLAEKAQAAPFGRTSKPDTATGAARP*
Ga0134128_123112271	3300010373	Terrestrial Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGQRWLRLAQKAKATPLGLTPAAPAEQAERR
Ga0126381_1000063711	3300010376	Tropical Forest Soil	MSSYVKYCHVQAAECARRAKLASSPELAAERRSLGLRWLKLAEKARAAPLSRPPQPETGRS*
Ga0134123_122179211	3300010403	Terrestrial Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAPAEPARS*
Ga0153918_10579291	3300012079	Attine Ant Fungus Gardens	MSSYVMYCRAQAAECARRAKLASSPELATERRNLGLRWLRLAEKAKATPLHRVREPAPKA
Ga0137388_101141944	3300012189	Vadose Zone Soil	SYVMYCRAQAAECARRVKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAAQAARP*
Ga0137364_1000003114	3300012198	Vadose Zone Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGHPREVESAAQGIRP*
Ga0137382_107977882	3300012200	Vadose Zone Soil	MSSYVIYCRAQAAECARRAKLASSPELAAERRNLGLRWLRLAQKAKATPFGRVREPAPAARPVRS*
Ga0137363_107739421	3300012202	Vadose Zone Soil	CKAQAVECARRAKLASSPELAAERRSLGLRWLKLAEKAKATPLGRPREVESAALGVRP*
Ga0137374_100757485	3300012204	Vadose Zone Soil	MYCRAQAAECARRAKLASSPEITASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAIRAARP
Ga0134028_12941731	3300012224	Grasslands Soil	QAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVESAAQGIRP*
Ga0134049_13194762	3300012403	Grasslands Soil	YVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVESAAQGIRP*
Ga0134024_10040421	3300012404	Grasslands Soil	AAECARRAKLASSPELATERRNLGLRWLRLAEKAKATPLNRVREPAPKP*
Ga0126375_116778321	3300012948	Tropical Forest Soil	MSSYVMYCRAQAAECARRAKLASSPEVVASHRSLGLRWLRLAEKAQAAPFGRTSKPGSAARP
Ga0164303_100592561	3300012957	Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAPAEQAERR*
Ga0164302_103393381	3300012961	Soil	CRAQAAECARRAKLASSPELAAERRDLGQRWLRLAQKAKATPLGRTPAAPAEQAERR*
Ga0134110_102613302	3300012975	Grasslands Soil	MSSYVKYCKVQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVESAAQGIRP*
Ga0164309_101210193	3300012984	Soil	SYVMYCRAQAAECARRAKLASSPELAAERRDLGQRWLRLAQKAKATPLGRTPAAPAEQAERR*
Ga0164304_102526961	3300012986	Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGQRWLRLAQKAKATPLGRTPAAPAEQAERR*
Ga0164305_102708161	3300012989	Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAPAEQTERRRSRSVIAELYR*
Ga0132256_1029140411	3300015372	Arabidopsis Rhizosphere	VPLAMCVCVRERVMSSYVMYCRAQAAECVRRAKLASSPELAAERRNLGLRWLRLAQKAKATPLGRTPAAPAEPARS*
Ga0182033_111568911	3300016319	Soil	CRAQAAECARRAKLASSPEIAAERRSLGLRWLRLAEKAQAAPFGPTSKLPSVVGATRS
Ga0182032_118364252	3300016357	Soil	MSSYVMYCRAQAAECGRRVKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPEP
Ga0182039_104769393	3300016422	Soil	MSSYVMYCRAQAAECARRAKLASSPEVAASHRSLGLRWLRLAEKAQAAPFGRTSKPESAALAAR
Ga0066655_101510464	3300018431	Grasslands Soil	QAAECARRVKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAARAARA
Ga0066667_100789862	3300018433	Grasslands Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVESAAQGIRP
Ga0066662_122510821	3300018468	Grasslands Soil	MYCRTQAAECARRAKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAIRAARP
Ga0210407_101439221	3300020579	Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGQRWLRLAQKAKATPLGRTPAAPAEQAERR
Ga0210407_113806911	3300020579	Soil	VCCVRERVMSSYVMYCRAQAVECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRVREPAPPAEQAERR
Ga0210403_110744392	3300020580	Soil	QAAECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRVREPAPPAEQAERR
Ga0210392_107703431	3300021475	Soil	CVRERVMSSYVMYCRAQAAECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRVREPAPPAEQAERR
Ga0210410_118058451	3300021479	Soil	QAVECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRPPAPPAEQTERR
Ga0126371_100491535	3300021560	Tropical Forest Soil	MSSYVKYCQVQAAECARRAKLASSPELAAERRSLGLRWLKLAEKARAAPLSRPPQPETGR
Ga0126371_105690542	3300021560	Tropical Forest Soil	MYCRAQAAECARRAKLASSPEIAASRRSLGLRWLRLAEKAQAAPFGRTSKPGSAARP
Ga0126371_112081412	3300021560	Tropical Forest Soil	MSSYMMYCRAQAAECARRAKLASSPELATERRNLGLRWLRLAEKAKATPLNRVREPAPKA
Ga0207685_100246151	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGQRWLRLAQKAKATPLGRTPAAPAEQAER
Ga0207684_101330913	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSSYVMYCRAQAAECARRVKLASSPEIAASHRSLGLRWLRLAEKAQAAPFGRTSKPEPAARAARA
Ga0209468_11675202	3300026306	Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRP
Ga0209265_10344851	3300026308	Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREAESTAQSIRP
Ga0209375_10368351	3300026329	Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVESAA
Ga0257170_10542341	3300026351	Soil	MSSYVKYCKAQAVECARRAKLASSPELAAERRSLGLRWLKLAEKAKATPLGRPREVESAALGVRP
Ga0257159_10594261	3300026494	Soil	MSSYVKYCKAQAVECARRAKLASSPELAAERRSLGLRWLKLAEKAKATPLGRPREVESAA
Ga0209577_102614911	3300026552	Soil	MSSYVKYCKAQAAECARRAKLASSPELAAERRSLGLRWLKLAEKAQATPLGRPREVES
Ga0209466_10049864	3300027646	Tropical Forest Soil	MSSYVMYCRAQAAECARRAKLASSPEIAAERRSLGLRWLRLAEKAKAAPFGRTSKPPSAVSATRP
Ga0207428_103860973	3300027907	Populus Rhizosphere	MCVCVRERVMSSYVMYCRAQAAECVRRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRVREAAPAAQAERR
Ga0307317_103472002	3300028720	Soil	VMSSYVMYCRAQAAECVRRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAPAEPARS
Ga0307280_103214772	3300028768	Soil	VRRAVGRVCCVRERVMSSYVMYCRAQAAECVRRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAP
Ga0307282_100240502	3300028784	Soil	VRRAVGRVCCVRERVMSSYVMYCRAQAAECVRRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAPAEPARS
Ga0307323_102321451	3300028787	Soil	MSSYVMYCRAQAAECVRRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAPAEPARS
Ga0307284_103220521	3300028799	Soil	SYVMYCRAQAAECVRRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAPAEPAR
Ga0307278_101094731	3300028878	Soil	CRDQAAECARRAKLASSPEIAAHHRSLGLRWLRLAEKAKAKAGKPASAAQTARLGTSSGRLVHGEAL
Ga0307277_1000007412	3300028881	Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRVREPAPPVEQAERR
Ga0307277_101735682	3300028881	Soil	MYCRDQAAECARRAKLASSPEIAAHHRSLGLRWLRLAEKAKAKAGKPASAAQTTPLGTSSSRLVHGEAL
Ga0318538_105350072	3300031546	Soil	MSSYVMYCRAQAAECARRAKLASSPEVAASHRSLGLRWLRLAEKAQAAPFGRTSKPESAALAARS
Ga0310915_110089741	3300031573	Soil	MSSYVMYCRAQAAECARRAKLASSPEIAASHRSLGLRWLRLVEKAQAAPFGRTSKPELAARPA
Ga0318561_103220551	3300031679	Soil	MYCRAQAVECARRAKLASSPEVAASQRSLGLRWLRLAEKAQAAPFGRTSKPG
Ga0307469_100183912	3300031720	Hardwood Forest Soil	MSSYVMYCRAQAAECARRAKLASSPELAAERRDLGLRWLRLAQKAKATPLGRTPAAPAGQTERR
Ga0306918_100916562	3300031744	Soil	MYCRAQAAECARRAKLASSPEIAAERRSLGLRWLRLAEKAQAAPFGPTSKLPSVVGATRS
Ga0318543_1000027813	3300031777	Soil	MSSYVRYCRNQAAECARRAKLASSPQLAAERRSLGLRWLRLAEKAQAAPFGQTSKPDAATAAMRFE
Ga0318547_105578842	3300031781	Soil	MSSYVMYCRAQAAECARRAKLASSPEIAASHRSLGLRWLRLVEKAQAAPFGRTSKPELAA
Ga0318503_100478643	3300031794	Soil	MSSYVMYCRAQAAECARRAKLASSPEIAASCRSLGLRWLRLAEKAQAAPFGRTS
Ga0318557_101324851	3300031795	Soil	MSSYVMYCRAQAVECARRAKLASSPEVAASQRSLGLRWLRLAEKAQAAPFGRTSK
Ga0318517_101594181	3300031835	Soil	MSSYVMYCRAQAAECARRAKLASSPEIAASCRSLGLRWLRLAEKAQAAPFGRMSK
Ga0306925_107522562	3300031890	Soil	MSSYVRYCRDQAAECARRAKLASSPEIAAHRRSLGLRWLRLAEKAKAAPFGQTSKPPSAVGATRF
Ga0318522_100099941	3300031894	Soil	DQAAECARRAKMASSPQLAAERRSLGLRWLRLAEKAQAAPFGRASKPDTATAAARP
Ga0310916_106912822	3300031942	Soil	MYCRAQAVECARRAKLASSPEVAASQRSLGLRWLRLAEKAQAAPFGRTSKPGPAALAA
Ga0318563_103559411	3300032009	Soil	MSSYVMYCRAQAAECARRAKLASSPEIAASCRSLGLRWLRLAEKAQAAPFGRTSKPAAL
Ga0318577_100353334	3300032091	Soil	MSSSYVMYCQAQAAECARRARLASSPELAAERRDLGLRWLRLAEKARAASVGRIRQPA
Ga0307471_1013970522	3300032180	Hardwood Forest Soil	MSYVKYCQVQAAECARRAKLASSPELAAERRTLGLRWLKLAEKARAAALSRPSQPEMAVPRGR
Ga0307471_1016242502	3300032180	Hardwood Forest Soil	MCERVMSSYVKYCKAQAVECARRAKLASSPELAAERRSLGLRWLKLAEKAKATPLGRPREVESAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058495

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences