Metagenome / Metatranscriptome Family F057540

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057540
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	45 residues
Representative Sequence	LLLEIVISLAVTGLSDTTLRDLGVLGLALCLTGCKNQRLVLRT
Number of Associated Samples	116
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.94 %
% of genes near scaffold ends (potentially truncated)	86.03 %
% of genes from short scaffolds (< 2000 bps)	81.62 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.588 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.471 % of family members)
Environment Ontology (ENVO)	Unclassified (22.794 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.70% β-sheet: 0.00% Coil/Unstructured: 49.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF00300	His_Phos_1	27.41
PF08240	ADH_N	9.63
PF13602	ADH_zinc_N_2	7.41
PF00202	Aminotran_3	5.19
PF02774	Semialdhyde_dhC	3.70
PF03091	CutA1	2.96
PF01425	Amidase	1.48
PF02515	CoA_transf_3	1.48
PF02518	HATPase_c	1.48
PF07920	DUF1684	1.48
PF00355	Rieske	1.48
PF09335	SNARE_assoc	1.48
PF03965	Penicillinase_R	1.48
PF02036	SCP2	1.48
PF00107	ADH_zinc_N	1.48
PF01435	Peptidase_M48	0.74
PF16884	ADH_N_2	0.74
PF02277	DBI_PRT	0.74
PF01161	PBP	0.74
PF00142	Fer4_NifH	0.74
PF02776	TPP_enzyme_N	0.74
PF00079	Serpin	0.74
PF14329	DUF4386	0.74
PF01872	RibD_C	0.74
PF01988	VIT1	0.74
PF00689	Cation_ATPase_C	0.74
PF04185	Phosphoesterase	0.74
PF03561	Allantoicase	0.74
PF00486	Trans_reg_C	0.74
PF13476	AAA_23	0.74
PF01522	Polysacc_deac_1	0.74
PF01243	Putative_PNPOx	0.74
PF00892	EamA	0.74
PF07859	Abhydrolase_3	0.74
PF00702	Hydrolase	0.74
PF08281	Sigma70_r4_2	0.74
PF01734	Patatin	0.74
PF01037	AsnC_trans_reg	0.74
PF14226	DIOX_N	0.74
PF00582	Usp	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	3.70
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	3.70
COG1324	Divalent cation tolerance protein CutA	Inorganic ion transport and metabolism [P]	2.96
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.48
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.48
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.48
COG3358	Uncharacterized conserved protein, DUF1684 family	Function unknown [S]	1.48
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	1.48
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.48
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.48
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.48
COG4266	Allantoicase	Nucleotide transport and metabolism [F]	0.74
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.74
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.74
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.74
COG2038	NaMN:DMB phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.74
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.74
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.74
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.74
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.74
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.74
COG1348	Nitrogenase ATPase subunit NifH/coenzyme F430 biosynthesis subunit CfbC	Coenzyme transport and metabolism [H]	0.74
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.74
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.74
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.74
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.59 %
Unclassified	root	N/A	29.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.59 %
Unclassified	root	N/A	29.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.59 %
Unclassified	root	N/A	29.41 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.79 %
Unclassified	root	N/A	29.41 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.91 %
Unclassified	root	N/A	29.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.47 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	11.03 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.94 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.47 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.74 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.74 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.74 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.74 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	5.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.47 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.47 %
Antricoccaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Antricoccaceae	0.74 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.74 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.74 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.74 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.74 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.47 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.47 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.74 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.74 %
Acidiferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium	0.74 %
Antricoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Antricoccaceae → Antricoccus	0.74 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.74 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.74 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.47 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.47 %
Antricoccus suffuscus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Antricoccaceae → Antricoccus → Antricoccus suffuscus	0.74 %
unclassified Acidiferrimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium	0.74 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.74 %
Actinoplanes xinjiangensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes xinjiangensis	0.74 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.74 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.74 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.47 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.47 %
Acidiferrimicrobium sp. IK	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	0.74 %
Nocardioides sp. Iso805N	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Iso805N	0.74 %
Antricoccus suffuscus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Antricoccaceae → Antricoccus → Antricoccus suffuscus	0.74 %
Actinoplanes xinjiangensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes xinjiangensis	0.74 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.74 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.74 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001632\|JGI20235J16296_1003207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	744	Open in IMG/M
3300001632\|JGI20235J16296_1003207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	744	Open in IMG/M
3300005435\|Ga0070714_100868090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	875	Open in IMG/M
3300005436\|Ga0070713_101378049	Not Available	684	Open in IMG/M
3300005467\|Ga0070706_101399459	Not Available	640	Open in IMG/M
3300005471\|Ga0070698_100310338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1508	Open in IMG/M
3300005994\|Ga0066789_10061034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1641	Open in IMG/M
3300006028\|Ga0070717_10039153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3856	Open in IMG/M
3300006028\|Ga0070717_10284761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1466	Open in IMG/M
3300006102\|Ga0075015_100194590	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300006176\|Ga0070765_100342013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1389	Open in IMG/M
3300006854\|Ga0075425_100254881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2019	Open in IMG/M
3300006954\|Ga0079219_11872553	Not Available	565	Open in IMG/M
3300009520\|Ga0116214_1063298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1346	Open in IMG/M
3300009521\|Ga0116222_1513730	Not Available	525	Open in IMG/M
3300009698\|Ga0116216_10995093	Not Available	501	Open in IMG/M
3300010048\|Ga0126373_12798660	Not Available	544	Open in IMG/M
3300010358\|Ga0126370_11250568	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300010359\|Ga0126376_12110709	Not Available	607	Open in IMG/M
3300010361\|Ga0126378_12646071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300010376\|Ga0126381_100083472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4027	Open in IMG/M
3300010376\|Ga0126381_100211896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2598	Open in IMG/M
3300010376\|Ga0126381_101369324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300010876\|Ga0126361_10246247	All Organisms → cellular organisms → Bacteria → Terrabacteria group	537	Open in IMG/M
3300012210\|Ga0137378_10355217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1361	Open in IMG/M
3300012210\|Ga0137378_10550558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1062	Open in IMG/M
3300012211\|Ga0137377_11221966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	681	Open in IMG/M
3300012957\|Ga0164303_10071603	Not Available	1620	Open in IMG/M
3300012960\|Ga0164301_10866651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Iso805N	697	Open in IMG/M
3300012960\|Ga0164301_11742681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300012987\|Ga0164307_10114295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1717	Open in IMG/M
3300013104\|Ga0157370_11441406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300016270\|Ga0182036_10481154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	981	Open in IMG/M
3300016422\|Ga0182039_11069149	Not Available	726	Open in IMG/M
3300017822\|Ga0187802_10250215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	686	Open in IMG/M
3300017924\|Ga0187820_1071334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	965	Open in IMG/M
3300017924\|Ga0187820_1087382	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300017924\|Ga0187820_1170820	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300017928\|Ga0187806_1101400	Not Available	919	Open in IMG/M
3300017932\|Ga0187814_10195593	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300017937\|Ga0187809_10162063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	778	Open in IMG/M
3300017937\|Ga0187809_10174657	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300017942\|Ga0187808_10266085	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300017955\|Ga0187817_10238306	Not Available	1159	Open in IMG/M
3300017972\|Ga0187781_11497402	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300017974\|Ga0187777_10693124	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300017994\|Ga0187822_10321592	All Organisms → cellular organisms → Bacteria → Terrabacteria group	551	Open in IMG/M
3300017995\|Ga0187816_10379977	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300018001\|Ga0187815_10023575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2632	Open in IMG/M
3300018007\|Ga0187805_10631080	Not Available	507	Open in IMG/M
3300018042\|Ga0187871_10415516	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300018060\|Ga0187765_10259967	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300018088\|Ga0187771_10562845	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300019887\|Ga0193729_1016775	All Organisms → cellular organisms → Bacteria	3216	Open in IMG/M
3300020081\|Ga0206354_10609777	Not Available	764	Open in IMG/M
3300020082\|Ga0206353_11634021	Not Available	528	Open in IMG/M
3300020579\|Ga0210407_10815879	All Organisms → cellular organisms → Bacteria → Terrabacteria group	719	Open in IMG/M
3300020582\|Ga0210395_10056090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2887	Open in IMG/M
3300021178\|Ga0210408_10639193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	841	Open in IMG/M
3300021180\|Ga0210396_11693983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	514	Open in IMG/M
3300021401\|Ga0210393_10026457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	4525	Open in IMG/M
3300021402\|Ga0210385_11355625	Not Available	544	Open in IMG/M
3300021403\|Ga0210397_10475129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	944	Open in IMG/M
3300021406\|Ga0210386_10193101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1721	Open in IMG/M
3300021559\|Ga0210409_10914083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300021560\|Ga0126371_11193716	Not Available	898	Open in IMG/M
3300021560\|Ga0126371_13100520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	562	Open in IMG/M
3300025703\|Ga0208357_1003427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9709	Open in IMG/M
3300025910\|Ga0207684_10180549	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300025944\|Ga0207661_11740467	Not Available	569	Open in IMG/M
3300026217\|Ga0209871_1000642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8747	Open in IMG/M
3300026551\|Ga0209648_10419394	Not Available	860	Open in IMG/M
3300026889\|Ga0207745_1023002	All Organisms → cellular organisms → Bacteria → Terrabacteria group	551	Open in IMG/M
3300027110\|Ga0208488_1054959	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300027110\|Ga0208488_1066681	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300027521\|Ga0209524_1098785	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300027783\|Ga0209448_10067116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1206	Open in IMG/M
3300027795\|Ga0209139_10067956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1249	Open in IMG/M
3300027855\|Ga0209693_10261650	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300027857\|Ga0209166_10133865	Not Available	1361	Open in IMG/M
3300027862\|Ga0209701_10478812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	680	Open in IMG/M
3300027869\|Ga0209579_10058757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2039	Open in IMG/M
3300027884\|Ga0209275_10715666	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300027884\|Ga0209275_10923024	Not Available	503	Open in IMG/M
3300027905\|Ga0209415_10394315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1122	Open in IMG/M
3300027911\|Ga0209698_10115357	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300028015\|Ga0265353_1016221	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300028781\|Ga0302223_10147963	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300028906\|Ga0308309_11854572	Not Available	509	Open in IMG/M
3300030114\|Ga0311333_10095420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Antricoccaceae → Antricoccus → Antricoccus suffuscus	2208	Open in IMG/M
3300030494\|Ga0310037_10144020	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300030707\|Ga0310038_10202037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	948	Open in IMG/M
3300031549\|Ga0318571_10196983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300031564\|Ga0318573_10038490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2281	Open in IMG/M
3300031564\|Ga0318573_10128229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1320	Open in IMG/M
3300031573\|Ga0310915_10265847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes xinjiangensis	1208	Open in IMG/M
3300031679\|Ga0318561_10288373	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300031682\|Ga0318560_10642628	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300031708\|Ga0310686_100971198	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031708\|Ga0310686_113496660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1117	Open in IMG/M
3300031753\|Ga0307477_10456028	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300031765\|Ga0318554_10007117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	5392	Open in IMG/M
3300031778\|Ga0318498_10426160	All Organisms → cellular organisms → Bacteria → Terrabacteria group	588	Open in IMG/M
3300031782\|Ga0318552_10000217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16133	Open in IMG/M
3300031799\|Ga0318565_10492640	Not Available	592	Open in IMG/M
3300031831\|Ga0318564_10106368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1247	Open in IMG/M
3300031831\|Ga0318564_10486383	Not Available	536	Open in IMG/M
3300031860\|Ga0318495_10175642	Not Available	965	Open in IMG/M
3300031894\|Ga0318522_10026576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1926	Open in IMG/M
3300031897\|Ga0318520_10064378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1970	Open in IMG/M
3300031897\|Ga0318520_10391741	Not Available	848	Open in IMG/M
3300031902\|Ga0302322_100473602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1452	Open in IMG/M
3300031910\|Ga0306923_11488642	All Organisms → cellular organisms → Bacteria → Terrabacteria group	709	Open in IMG/M
3300031942\|Ga0310916_10177495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1773	Open in IMG/M
3300031947\|Ga0310909_10600861	Not Available	919	Open in IMG/M
3300031962\|Ga0307479_10823069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300032039\|Ga0318559_10287406	Not Available	763	Open in IMG/M
3300032054\|Ga0318570_10469831	All Organisms → cellular organisms → Bacteria → Terrabacteria group	574	Open in IMG/M
3300032055\|Ga0318575_10487033	Not Available	626	Open in IMG/M
3300032066\|Ga0318514_10792664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300032090\|Ga0318518_10731694	Not Available	503	Open in IMG/M
3300032160\|Ga0311301_10507124	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300032160\|Ga0311301_12144458	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300032895\|Ga0335074_11426390	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300032954\|Ga0335083_10590156	All Organisms → cellular organisms → Bacteria → Terrabacteria group	917	Open in IMG/M
3300033290\|Ga0318519_10244480	Not Available	1037	Open in IMG/M
3300033805\|Ga0314864_0155817	Not Available	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.79%
Host-Associated	Host-Associated	2.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.82%
Aquatic	Environmental → Aquatic	13.97%
Plants	Host-Associated → Plants	1.47%
Arthropoda	Host-Associated → Arthropoda	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.62%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Peat	Environmental → Terrestrial → Peat	2.21%
Sediment	Environmental → Aquatic → Sediment	1.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.47%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.29%
Loam	Environmental → Terrestrial → Soil → Loam	13.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.47%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	10.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.74%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	10.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.41%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.21%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.47%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.47%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.47%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.47%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.47%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.74%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.74%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001632	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026889	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 57 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20235J16296_10032072	3300001632	Forest Soil	VISLAATGLSDTALRDVGVLGLAVCLVGSKNQRLVLRS*
JGI20235J16296_10032073	3300001632	Forest Soil	AAIASVLMLEIVISLAATGLSDTALRDVGVLGLAVCLVGSKNQHLVLRS*
Ga0070714_1008680902	3300005435	Agricultural Soil	IAPRISAAIASVLLLEIVISLSVSGLSDTSMRDVGVLGLAVVLTGCRNQRLVLRN*
Ga0070713_1013780492	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AVLVLEIVISLTVSGGLSDFILRDVGVLGLAICLTGIRQQRLVLSR*
Ga0070706_1013994592	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AGIAALLLAQIVIWLTATSGLSDLTLRDVGVLGLALCLTGTTERRLMLAR*
Ga0070698_1003103381	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	IVIWLTATAGLSDLTLRDVGVLGLALCLTGTTQRRLMLAR*
Ga0066789_100610341	3300005994	Soil	LLEIVISLAVTGGLSDLTLRDVGVLGLAVCLTGRSIQRLVLTG*
Ga0070717_100391534	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RISAAIASVLLLEIVISLSVSGLSDTAMRDVGVLGLAVVLTGCRNQRLVLRN*
Ga0070717_102847611	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ISAAIASVLLLEIVISLSVSGLSDTSMRDVGVLGLAVVLTGCRNQRLVLRN*
Ga0075015_1001945904	3300006102	Watersheds	MLEIVIAVAMTGQSPTALRDVGVLGLAVCLTGVRHQRLVLRN*
Ga0070765_1003420131	3300006176	Soil	ATVLMLEIVIAVAVTGQSPTALRDVGVLGLAVCLTGVRHQRLVLRN*
Ga0075425_1002548811	3300006854	Populus Rhizosphere	AAAVSVALLLEIVISLTVASGLSDLVLRDVGVLGLAACLTAPTRQRLALSR*
Ga0079219_118725532	3300006954	Agricultural Soil	ALTVLVLLEIVVSLTLTTGLSDLVLRDVGVLGLAVCLTAPTPQRLVLTR*
Ga0116214_10632983	3300009520	Peatlands Soil	AAAAVASVLMLEIVIAVAMTGQSPTALRDVGVLGLAVCLTGVRHQRLVLRN*
Ga0116222_15137301	3300009521	Peatlands Soil	SVLLLEIVISLAVTGLDATAVRDVGVLGLAVCLTGGKNQRLVLRN*
Ga0116216_109950932	3300009698	Peatlands Soil	ASLLMLEIVIALAATGLSDTALRDVGVLGLAVCLTGCKNQRLVLRN*
Ga0123355_114512112	3300009826	Termite Gut	AQIVVWLWASAGLSDLTLRDVGVLGLALCIAGRTEQRLVLTG*
Ga0126373_127986601	3300010048	Tropical Forest Soil	VISLTVQAGLSDLTLRDVGVLGLALCLTGAAEQRFVLAS*
Ga0126370_112505681	3300010358	Tropical Forest Soil	MMNESKVIWLTATAGLSDLTMRDVGVLGLALCLTGATEQRFTLTS*
Ga0126376_121107091	3300010359	Tropical Forest Soil	ITGGLSDLTLRDVGVLGLALCLTADTRQRAVLSN*
Ga0126378_126460712	3300010361	Tropical Forest Soil	ISLTISGGLSDLTLRDVGVLGLAVVLTGVSQERLVLTG*
Ga0126379_105558761	3300010366	Tropical Forest Soil	LWASAGLSDLTLRDVGVLGLAPCLTGRTEQRFALTN*
Ga0126381_1000834725	3300010376	Tropical Forest Soil	GAAIATIVLLQIVITLTITGGLSDLTMRDVGVLGLAVSLTGRARQRLTI*
Ga0126381_1002118964	3300010376	Tropical Forest Soil	LLIAEIVIWLTITAGLSDLTLRDVGVLGLAVCLSGDTRQRLVLAT*
Ga0126381_1013693241	3300010376	Tropical Forest Soil	AVTAVLLAQIVLTLAITGGLSDLTLRDLGVLGLAVCLTGSGPQRLTV*
Ga0126361_102462471	3300010876	Boreal Forest Soil	LEIVIGLAATGVSDTALRDLGVLGLAVCLTGCKNQRLVLRG*
Ga0137362_117144181	3300012205	Vadose Zone Soil	LTITGGLTDLTLRDVGVLGLAVCLTGATRQRALLTA*
Ga0137378_103552173	3300012210	Vadose Zone Soil	VILLAEIVISLAVSDGLSDLVLRDIGVLGLAVCLTGCSRHRLVLSR*
Ga0137378_105505582	3300012210	Vadose Zone Soil	GVALRLAAAVAAVLLLQIVITLAVTGGLTDVTLRDVGVLGLAVCLTGDGRQRLVLRR*
Ga0137378_105942642	3300012210	Vadose Zone Soil	TITGGLTDLTLRDVGVFGLAICLTGGSRQRAVLTR*
Ga0137377_112219662	3300012211	Vadose Zone Soil	WLAVSGGLSDLVIRDLGVLGLAVCLTGCSSHRAVLSR*
Ga0164303_100716034	3300012957	Soil	VVLLLQIVTSLTMSNGLSDLILRDVGVLGLAVCLTASTRQRLVLSR*
Ga0164301_108666511	3300012960	Soil	VLLLLQIVTSLTMSNGLSDLVLRDVGVLGLAVCLTATTRQRLVLSR*
Ga0164301_117426811	3300012960	Soil	IVTSLSMSNGLSDLVLRDVGVLGLAVCLTATTRQRLVLSR*
Ga0126369_119064782	3300012971	Tropical Forest Soil	VLQIVITLTVTGGLTDLTLRDAGVLGLALCLTGSSRQRAVLTG*
Ga0164307_101142951	3300012987	Soil	LLLQIVASLTMSNGLSDLVLRDVGVLGLAVCLTATTRQRLVLRG*
Ga0157370_114414061	3300013104	Corn Rhizosphere	ALSAVLLLEIVISLTLAGGLSDLSVRDLGVLGLAVGLTAATRQRLVLRG*
Ga0182036_104811541	3300016270	Soil	SLAASGISDTTLRDLGVLGLAIVLTGSERQRLVLRG
Ga0182039_110691491	3300016422	Soil	AALASVLLLEIVISLAASGISDTTLRDLGVLGLAIVLTGSERQRLVLRG
Ga0187802_102502151	3300017822	Freshwater Sediment	MLLEIVIALTVSGGLSDLVLRDVGVLGLALAVVGQRHDRLVLRH
Ga0187820_10713341	3300017924	Freshwater Sediment	AAAVASVLLLEIVISLAVTGAAETTARDIGVLGLAVCLTGCKNQRLVLRG
Ga0187820_10873823	3300017924	Freshwater Sediment	SVLLLEIVISLAVTGLDATAVRDVGVLGLAVCLTGGKNQRLVLRN
Ga0187820_11708201	3300017924	Freshwater Sediment	PRVAAAIASLLMLEIVISLAATGLSDTALRDVGVLGLAVCLTGCQNQRLVLRT
Ga0187806_11014002	3300017928	Freshwater Sediment	VSAAIASVLLLEIVINLSVSGLSDTSLRDLGVLGLAICLTGCRDQRLRLRG
Ga0187814_101955932	3300017932	Freshwater Sediment	ALASLLMLEIVISLAATGLSDTALRDVGVLGLAVCLTGCQNQRLVLRT
Ga0187809_101620631	3300017937	Freshwater Sediment	RAAAAAAAVLLLEIVAGLTVSGGLSDLTLRDVGVLGLAICLTGHTRQRLVLRG
Ga0187809_101746571	3300017937	Freshwater Sediment	RAAAALASLLMLEIVISLAATGLSDTALRDVGVLGLAVCLSGCQNQRLVLRT
Ga0187808_102660851	3300017942	Freshwater Sediment	LLQIVVSLTITAGLSDLTLRDVGVLGLAICLVGDRKQRLVLTG
Ga0187817_102383061	3300017955	Freshwater Sediment	MPRAAAAVASVLLLEIVISLAATGVSDTVMRDVGVLGLAVCLTGCRNQRLVLRG
Ga0187781_114974022	3300017972	Tropical Peatland	VISLAATGLSDTALRDVGVLGLALCLIGSKNQHLVLRG
Ga0187777_102949571	3300017974	Tropical Peatland	ITLAITGGLTDLTLRDVGVLGLAICVAGNTRQRLVLTS
Ga0187777_106931242	3300017974	Tropical Peatland	VLLLEIVISLAVTGVSATAVRDVGVLGLAVCLTGCPNQRLALRS
Ga0187822_103215922	3300017994	Freshwater Sediment	LAAAVASMVLLEIVISLAVTGLSPTALRDLGVLGLAVCLTGCKNQRLVLRG
Ga0187816_103799771	3300017995	Freshwater Sediment	IVISLAVTGLDATAVRDVGVLGLAVCLTGGKNQRLVLRN
Ga0187815_100235754	3300018001	Freshwater Sediment	RLGGAIAALLLLQIVVSLTITAGLSDLTLRDVGVLGLAICLVGDRKQRLVLTG
Ga0187805_106310802	3300018007	Freshwater Sediment	LAQIVIWLTATAGLSDLTLRDVGVLGLALCIAGSTEQRLTLAS
Ga0187871_104155162	3300018042	Peatland	VAMTGQSPTALRDIGVLGLAVCLTGVRHQRLVLRN
Ga0187765_102599673	3300018060	Tropical Peatland	LEIVIALAATGLSDTALRDLGVLGLAVCLTGVREHHLVLRD
Ga0187771_105628451	3300018088	Tropical Peatland	VASVLLLEIVISLSVTGLSDTAFRDLGVLGLALCLTGCKNQRLVLRA
Ga0193729_10167755	3300019887	Soil	MAVSAALLLEIVISLAVTGGLSDLTLRDVGVLGLAVCLTGIPQQRLLLARPGAGGPRR
Ga0206354_106097771	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	IAPRTAAAIAAVMLLEIVISLSATAGLSDLTLRDVGVLGLAVGLTGCTRHRLVLRG
Ga0206353_116340212	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VISLSATAGLSDLTLRDVGVLGLAVGLTGCTRHRMVLRG
Ga0210407_108158792	3300020579	Soil	IASVLLLEIVISLVVTGVSDTALRDLGVLGLAVCLTGCKNQRLVLRG
Ga0210399_101237272	3300020581	Soil	MGSNGRTAGLPDLTLRDVGVLGLAICLTGRTRPRLVLRG
Ga0210399_105127652	3300020581	Soil	MGSNGWTAGLPDLMLRDVGVLGLAICLTGHTRPRLVL
Ga0210395_100560907	3300020582	Soil	VATVLMLEIVIAVAVTGQSPTALRDVGVLGLAVCLTGIRHQRLVLRN
Ga0210408_106391932	3300021178	Soil	IVIWLTATAGLSDLTLRDAGVLGLALCIAGSTEQRLTLAS
Ga0210396_116939831	3300021180	Soil	GIAPRISAAIASVVLLEIVISLSVSGLSDTSMRDVGVLGLAVVLTGCRNQRLVLRN
Ga0210393_100264578	3300021401	Soil	LMLEIVIAVAVTGQSPTALRDVGVLGLAVCLTGIRHQRLVLRN
Ga0210385_113556252	3300021402	Soil	PRISAAIASVLLLEIVISLSVSGLSDTSMRDVGVLGLAVVLTGCRNQRLALRN
Ga0210397_104751292	3300021403	Soil	AAAVVAILLLEIVISLTVTAGLSDLTLRDVGVLGLAIALTGPSEQRLTLTR
Ga0210386_101931012	3300021406	Soil	RASAAVASVLMLEIVISLSVSGLSDTSMRDVGVLGLAICLTGCRNQRLVLRG
Ga0210409_109140832	3300021559	Soil	MTRLTTAAPGVSDTALRDLGALGLAVCLTGCKNQRLVLRG
Ga0126371_111937161	3300021560	Tropical Forest Soil	IAAAITTVTLLEIVISLTVTAGPSDLVLRDLGVLGLAICLTGITQQRLVLRR
Ga0126371_131005202	3300021560	Tropical Forest Soil	AAVVALLLAQIVIWLTIKAGLSDLTLRDVGVLGLSLCMTGTAEQRFVLAS
Ga0208357_10034271	3300025703	Arctic Peat Soil	AAVLLLEIVISLAVTGGLSDLTLRDVGVLGLAVCLTGRSIQRLVLTG
Ga0207684_101805493	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ASVLLLEIVISLSVSGLSDTSMRDVGVLGLAVVLTGCRNQRLLLRD
Ga0207661_117404671	3300025944	Corn Rhizosphere	GITPRTAAAIAAVMLLEIVISLAATGGLSDLTLRDVGVLGLAVGLTGCTRHRMVLRG
Ga0209871_100064211	3300026217	Permafrost Soil	AAAAAAAVLLLEIVISLAVTGGLSDLTLRDVGVLGLAVCLTGRSIQRLVLTG
Ga0209648_104193941	3300026551	Grasslands Soil	LLLLQIVVWLTISAGLSDLTLRDVGVLGLAVCLMGSREQRLVLTS
Ga0207745_10230022	3300026889	Tropical Forest Soil	AAAIASVLLLEIVISLAVSGLSDTTLRDLGVLGLALCLTGCRNQRLVLRT
Ga0208488_10549592	3300027110	Forest Soil	SVLMLEIVISLAATGLSDTALRDVGVLGLAVCLVGSKNQRLVLRS
Ga0208488_10666811	3300027110	Forest Soil	SVLMLEIVISLAATGLSDTALRDVGVLGLAVCLVGSKNQHLVLRS
Ga0209524_10987852	3300027521	Forest Soil	LEIVISLAVTGGLSDLTLRDVGVLGLAVCLTGISHQRLALRR
Ga0209448_100671163	3300027783	Bog Forest Soil	VISLVVTGVSDTALRDLGVLGLAVCLTGCKNQRLVLRG
Ga0209139_100679561	3300027795	Bog Forest Soil	AAIASVLLLEIVISLVVTGVSDTALRDLGVLGLAVCLTGCKNQRLVLRG
Ga0209693_102616502	3300027855	Soil	AVASVLLLEIVIALAATGVSDTALRDLGVLGLAVCLTGCQNQRLVLRG
Ga0209166_101338651	3300027857	Surface Soil	ISLTVNGGLSDLTMRDVGVLGLAVLLSSGTRQRLTLTR
Ga0209701_104788121	3300027862	Vadose Zone Soil	VISLTVTGGLSDLTLRDVGVLGLAVCLTAATRQRLVLSR
Ga0209579_100587575	3300027869	Surface Soil	AAAALASLLMLEIVISLAATGLSDTALRDVGVLGLAVCLTGGQNQRLVLRT
Ga0209275_107156662	3300027884	Soil	VLLLEIVIALAVNGLSDTTLRDLGVLGLALCLTGSTNQRLVLRN
Ga0209275_109230241	3300027884	Soil	ASVLLLEIVISLAVTGVSDTALRDLGVLGLAVCLTGCQNQRLLLRG
Ga0209415_103943151	3300027905	Peatlands Soil	IASLLMLEIVIALAATGLSDTALRDVGVLGLAVCLTGCKNQRLVLRT
Ga0209698_101153574	3300027911	Watersheds	LLEIVVSLTVTAGLSDLVLRDLGVLGLAICLTGITQHRLVLRR
Ga0265353_10162212	3300028015	Soil	EIVIAVAVTGQSPTALRDVGVLGLAVCLTGVRHQRLVLRN
Ga0302223_101479632	3300028781	Palsa	ASVLLLEITISLAVTGQSPTALRDVGVLGLAVCLTGCKNQRLALRN
Ga0308309_118545721	3300028906	Soil	AAAAIASVLLLEIVISLVVTGVSDTALRDLGVLGLAVCLTGCKNQRLVLRG
Ga0311333_100954203	3300030114	Fen	LTITNGLSDLVLRDVGVLGLAVCLTAATRQRLVLTG
Ga0310037_101440201	3300030494	Peatlands Soil	IVIAVAMTGQSPTALRDVGVLGLAVCLTGVRHQRLVLRN
Ga0310038_102020371	3300030707	Peatlands Soil	PRAAAALASLLMLEIVISLAVTGLSDTALRDVGVLGLAVCLTGCKNQRLVLRN
Ga0318571_101969832	3300031549	Soil	LTEIVISLLASGGWSDLVMRDVGVLGLAVSLTGSARHRLVLR
Ga0318573_100384901	3300031564	Soil	AAAAIASVLLLEIVISLAVTGLSDTTLRDLGVLGLALCLTGCKNQRLVLRT
Ga0318573_101282294	3300031564	Soil	VLLLKIVISLAVTGLSDTALRDLGVLGLAVCLTGCQNQRPVLR
Ga0310915_102658471	3300031573	Soil	AAVLLLEIVISLTISGGLSDLTLRDAGVLGLAITLTGVSQRRLVLRH
Ga0318561_102883732	3300031679	Soil	IVISLAVTGLSDTTLRDLGVLGLALCLTGCKNQRLVLRT
Ga0318560_106426282	3300031682	Soil	VEIVISLAVTGLSPTALRDLGVLGLAVCLTGCKNQRLVLRG
Ga0310686_1009711982	3300031708	Soil	VIALAATGLSDTALRDVGVLGLALCLVGSKNQHLVLRG
Ga0310686_1134966601	3300031708	Soil	AIASLLLLEIVIALAATGLSDTALRDLGVLGLAVCLTGCKNQRLVLRG
Ga0307477_104560281	3300031753	Hardwood Forest Soil	VALLEIVISLAVTGLSPTALRDVGVLGLAVCLTGCKNQRLVLRG
Ga0318554_100071171	3300031765	Soil	ASVLMLEIVISLSVSGLSDTSMRDVGVLGLAICLTGCRTHRLTLRG
Ga0318498_104261601	3300031778	Soil	VISLAVTGLSDTALRDLGVLGLAVCLTGCQNQRPVLRN
Ga0318552_100002171	3300031782	Soil	VISLTISGGLSDLTLRDAGVLGLAITLTGVSQRRLVLRH
Ga0318565_104926402	3300031799	Soil	EIVISLAVTGLSPTALRDVGVLGLAVCLTGCKNQRLVLRG
Ga0318564_101063681	3300031831	Soil	SVLLLEIVISLAVTGLSDTTLRDLGVLGLALCLTGCKNQRLVLLT
Ga0318564_104863831	3300031831	Soil	LLEIIISLTVTAGLSDLTMRDVGVLGLAVCLTGLSHQRLALRR
Ga0318512_100201784	3300031846	Soil	LLAALLLAEIVISLTISGGLSDLTMRDAGVLGLAITLTGVSQRRLVLRR
Ga0318495_101756422	3300031860	Soil	IVISLTISGGLSDLTLRDAGVLGLAITLTGVSQRRLVLRR
Ga0318522_100265761	3300031894	Soil	VLLAEIVISLTISGGLSDLTLRDAGVLGLAITLTGVSQRRLVLRR
Ga0318520_100643784	3300031897	Soil	LLLEIVISLAVTGLSDTTLRDLGVLGLALCLTGCKNQRLVLRT
Ga0318520_103917411	3300031897	Soil	VLLLEIVISLTISGGLSDLTLRDAGVLGLAITLTGVSQRRLVLRH
Ga0302322_1004736023	3300031902	Fen	TITNGLSDLVLRDVGVLGLAVCLTAATRQRLVLIG
Ga0306923_114886422	3300031910	Soil	APRAAAAIASVLLLEIVISLAASGLSDTALRDLGVLGLALCLTGCQNQRLVLRT
Ga0310916_101774951	3300031942	Soil	TAVLLLEIVIGLTVTAGLSDLTLRDVGVLGLAVCLTGRTRQRFVLRG
Ga0310909_106008611	3300031947	Soil	NSLTISGGLSDLTLRDAGVLGQAITLTGVSQRRLVLRH
Ga0307479_108230692	3300031962	Hardwood Forest Soil	LLEIVISLTVTGGLSDLTLRDVGVLGLAIGLTGRHTQRLVLSR
Ga0318559_102874061	3300032039	Soil	AALASVLLLEIVISLAVSGISDTTLRDLGVLGLAIVLTGCERQRLVLRG
Ga0318570_104698311	3300032054	Soil	AIASVLLLEIVISLSVSGLTDTSMRDVGVLGLAICLTGCRTHRLALRG
Ga0318575_104870331	3300032055	Soil	VAAALASVLLLEIVISLAASGISDTTLRDLGVLGLAIVLTGSERQRLVLRG
Ga0318514_107926642	3300032066	Soil	AAAAAAAALLLEIVAGLTVTGGLSDLTLRDVGVLGLAICLTGRTRQRLVLRG
Ga0318518_107316941	3300032090	Soil	LEIVVSLTVTAGLSDLVLRDLGVLGLAICLTAITQQRLVLRR
Ga0311301_105071244	3300032160	Peatlands Soil	IVISLAVTGLSPTALRDIGVLGLAVCLTGCKNQRLVLRG
Ga0311301_121444582	3300032160	Peatlands Soil	ASVLMLEIVIAVAMTGQSPTALRDIGVLGLAVCLTGVRHQRLVLRN
Ga0335074_114263902	3300032895	Soil	VLLLEIVISLSVSGLSDTSMRDVGVLGLAVVLTGCRDQRLVLRN
Ga0335083_105901562	3300032954	Soil	IAPRISAAIASVLLLEIVISLMVSGLSDTSMRDVGVLGLAVVLAGCRNQRLVLRN
Ga0318519_102444801	3300033290	Soil	EIVISLTISGGLSDLTLRDAGVLGLAITLTGVSQRRLVLRH
Ga0314864_0155817_467_583	3300033805	Peatland	VSLAATAGLSDLVLRDLGVLGLAVCLTGVTQQRLVLRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057540

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences