Metagenome / Metatranscriptome Family F056831

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056831
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	54 residues
Representative Sequence	VRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASARKTLKLFEPSKTA
Number of Associated Samples	120
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.62 %
% of genes near scaffold ends (potentially truncated)	84.67 %
% of genes from short scaffolds (< 2000 bps)	84.67 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.080 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.197 % of family members)
Environment Ontology (ENVO)	Unclassified (37.226 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.715 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.51% β-sheet: 7.59% Coil/Unstructured: 51.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF03243	MerB	10.95
PF12705	PDDEXK_1	5.11
PF03795	YCII	4.38
PF16916	ZT_dimer	2.92
PF00977	His_biosynth	2.92
PF05593	RHS_repeat	1.46
PF13744	HTH_37	1.46
PF02517	Rce1-like	1.46
PF10282	Lactonase	0.73
PF13173	AAA_14	0.73
PF13683	rve_3	0.73
PF13690	CheX	0.73
PF00551	Formyl_trans_N	0.73
PF07883	Cupin_2	0.73
PF08240	ADH_N	0.73
PF12697	Abhydrolase_6	0.73
PF05973	Gp49	0.73
PF12867	DinB_2	0.73
PF00494	SQS_PSY	0.73
PF00924	MS_channel	0.73
PF03992	ABM	0.73
PF01909	NTP_transf_2	0.73
PF08818	DUF1801	0.73
PF00665	rve	0.73
PF13701	DDE_Tnp_1_4	0.73
PF00486	Trans_reg_C	0.73
PF09976	TPR_21	0.73
PF14066	DUF4256	0.73
PF01196	Ribosomal_L17	0.73
PF00829	Ribosomal_L21p	0.73
PF04255	DUF433	0.73
PF01642	MM_CoA_mutase	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.38
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.46
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.46
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	1.46
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.73
COG0203	Ribosomal protein L17	Translation, ribosomal structure and biogenesis [J]	0.73
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.73
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.73
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.73
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.73
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.73
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.73
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.73
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.73
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.73
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.73
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	0.73
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.73
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.08 %
Unclassified	root	N/A	2.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.08 %
Unclassified	root	N/A	2.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.08 %
Unclassified	root	N/A	2.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.11 %
Unclassified	root	N/A	2.92 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.39 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.11 %
Unclassified	root	N/A	2.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.46 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.39 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.65 %
Unclassified	root	N/A	2.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.46 %
Leptospirales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales	0.73 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.73 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.39 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.65 %
Unclassified	root	N/A	2.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.46 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.73 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.73 %
Leptospiraceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae	0.73 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.39 %
Unclassified	root	N/A	2.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.46 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	1.46 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.73 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.73 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	0.73 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.39 %
Unclassified	root	N/A	2.92 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.46 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.46 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.73 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.73 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	0.73 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0843389	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300000550\|F24TB_11005620	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300000955\|JGI1027J12803_104963026	All Organisms → cellular organisms → Bacteria → Acidobacteria	8749	Open in IMG/M
3300001143\|JGI12687J13287_101802	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300002558\|JGI25385J37094_10150520	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300002911\|JGI25390J43892_10042173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300002914\|JGI25617J43924_10007737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3395	Open in IMG/M
3300002917\|JGI25616J43925_10071862	All Organisms → cellular organisms → Bacteria → Acidobacteria	1460	Open in IMG/M
3300005171\|Ga0066677_10074506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1751	Open in IMG/M
3300005180\|Ga0066685_11114324	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005446\|Ga0066686_11131353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300005451\|Ga0066681_10111612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1575	Open in IMG/M
3300005542\|Ga0070732_10416828	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300005548\|Ga0070665_100048994	All Organisms → cellular organisms → Bacteria	4240	Open in IMG/M
3300005549\|Ga0070704_100383428	All Organisms → cellular organisms → Bacteria → Acidobacteria	1195	Open in IMG/M
3300005561\|Ga0066699_10392387	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300005575\|Ga0066702_10866009	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005616\|Ga0068852_102422705	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300005713\|Ga0066905_101257565	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300005841\|Ga0068863_100311036	All Organisms → cellular organisms → Bacteria → Proteobacteria	1529	Open in IMG/M
3300006034\|Ga0066656_10983839	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300006173\|Ga0070716_100927826	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300006800\|Ga0066660_11717664	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300007258\|Ga0099793_10058081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1724	Open in IMG/M
3300007258\|Ga0099793_10460096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300007265\|Ga0099794_10428352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300007265\|Ga0099794_10461888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300009012\|Ga0066710_102300110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300009088\|Ga0099830_10787815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300009088\|Ga0099830_10927819	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300009088\|Ga0099830_11042472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300009089\|Ga0099828_10237810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1631	Open in IMG/M
3300009098\|Ga0105245_12304110	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300009143\|Ga0099792_10798364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300009177\|Ga0105248_10827765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300009523\|Ga0116221_1290081	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300009792\|Ga0126374_10749623	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300009824\|Ga0116219_10692939	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300009839\|Ga0116223_10328192	All Organisms → cellular organisms → Bacteria → Acidobacteria	909	Open in IMG/M
3300010322\|Ga0134084_10058060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1155	Open in IMG/M
3300010323\|Ga0134086_10285689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300010337\|Ga0134062_10301347	Not Available	759	Open in IMG/M
3300010341\|Ga0074045_10021730	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	5010	Open in IMG/M
3300010360\|Ga0126372_11676542	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300010361\|Ga0126378_10110102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2736	Open in IMG/M
3300010364\|Ga0134066_10373615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300010366\|Ga0126379_12153821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300010376\|Ga0126381_103039053	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300011081\|Ga0138575_1197523	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300011269\|Ga0137392_10653841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300011269\|Ga0137392_11607974	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300011269\|Ga0137392_11625032	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300011270\|Ga0137391_10855761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300011271\|Ga0137393_11497151	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300012202\|Ga0137363_11612703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012203\|Ga0137399_10618517	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300012205\|Ga0137362_10077977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2757	Open in IMG/M
3300012205\|Ga0137362_10079438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2732	Open in IMG/M
3300012205\|Ga0137362_10149165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1998	Open in IMG/M
3300012206\|Ga0137380_11024809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300012207\|Ga0137381_10333825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1321	Open in IMG/M
3300012207\|Ga0137381_11101015	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300012208\|Ga0137376_10080119	All Organisms → cellular organisms → Bacteria	2735	Open in IMG/M
3300012351\|Ga0137386_10696114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300012359\|Ga0137385_10276834	All Organisms → cellular organisms → Bacteria → Acidobacteria	1448	Open in IMG/M
3300012362\|Ga0137361_10131584	All Organisms → cellular organisms → Bacteria → Acidobacteria	2216	Open in IMG/M
3300012362\|Ga0137361_10431938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300012362\|Ga0137361_10667830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300012582\|Ga0137358_10027307	All Organisms → cellular organisms → Bacteria	3720	Open in IMG/M
3300012918\|Ga0137396_10163150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1627	Open in IMG/M
3300012918\|Ga0137396_11062653	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300012918\|Ga0137396_11311856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300012923\|Ga0137359_11329872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300012923\|Ga0137359_11661023	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300012923\|Ga0137359_11721271	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300012944\|Ga0137410_10332762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1210	Open in IMG/M
3300012948\|Ga0126375_10086676	All Organisms → cellular organisms → Bacteria → Acidobacteria	1811	Open in IMG/M
3300014150\|Ga0134081_10072061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1057	Open in IMG/M
3300015356\|Ga0134073_10100973	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300015356\|Ga0134073_10265399	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300015374\|Ga0132255_104719031	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300016341\|Ga0182035_11755641	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300017822\|Ga0187802_10083923	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300017924\|Ga0187820_1298685	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300017932\|Ga0187814_10453822	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300017940\|Ga0187853_10406703	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300017943\|Ga0187819_10535041	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300017970\|Ga0187783_10504077	Not Available	877	Open in IMG/M
3300017972\|Ga0187781_11197648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	559	Open in IMG/M
3300018006\|Ga0187804_10221467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300018012\|Ga0187810_10026452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2111	Open in IMG/M
3300018013\|Ga0187873_1257821	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300018030\|Ga0187869_10626254	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300018086\|Ga0187769_10392455	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300018090\|Ga0187770_10526348	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300020580\|Ga0210403_10026576	All Organisms → cellular organisms → Bacteria	4613	Open in IMG/M
3300020581\|Ga0210399_10134364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2038	Open in IMG/M
3300021088\|Ga0210404_10094945	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300021402\|Ga0210385_10210947	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300021559\|Ga0210409_11351661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300023672\|Ga0247553_107213	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300024225\|Ga0224572_1090243	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300025914\|Ga0207671_11163033	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300025915\|Ga0207693_10057136	All Organisms → cellular organisms → Bacteria	3059	Open in IMG/M
3300025916\|Ga0207663_11157310	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300025941\|Ga0207711_11370211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300026088\|Ga0207641_10280788	All Organisms → cellular organisms → Bacteria → Proteobacteria	1566	Open in IMG/M
3300026304\|Ga0209240_1112101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300026320\|Ga0209131_1027398	All Organisms → cellular organisms → Bacteria → Acidobacteria	3365	Open in IMG/M
3300026327\|Ga0209266_1269626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300026332\|Ga0209803_1082089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1348	Open in IMG/M
3300026335\|Ga0209804_1023073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3225	Open in IMG/M
3300026361\|Ga0257176_1047695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300026507\|Ga0257165_1085455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300026557\|Ga0179587_10095493	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300026557\|Ga0179587_10634499	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300027587\|Ga0209220_1021129	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300027648\|Ga0209420_1089064	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300027862\|Ga0209701_10329229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300027903\|Ga0209488_10611924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300028906\|Ga0308309_10308301	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300030706\|Ga0310039_10354814	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031090\|Ga0265760_10265198	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031128\|Ga0170823_14714894	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300031573\|Ga0310915_10139104	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300031715\|Ga0307476_10049926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2848	Open in IMG/M
3300031753\|Ga0307477_10709445	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300031910\|Ga0306923_11636396	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300031942\|Ga0310916_10077088	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	2625	Open in IMG/M
3300032059\|Ga0318533_10504334	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300032160\|Ga0311301_10768381	All Organisms → cellular organisms → Bacteria → Acidobacteria	1333	Open in IMG/M
3300032180\|Ga0307471_100754779	All Organisms → cellular organisms → Bacteria → Acidobacteria	1139	Open in IMG/M
3300032261\|Ga0306920_102204286	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300032892\|Ga0335081_10034098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8156	Open in IMG/M
3300032898\|Ga0335072_10076388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4372	Open in IMG/M
3300033977\|Ga0314861_0348680	Not Available	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.70%
Host-Associated	Host-Associated	7.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.13%
Plants	Host-Associated → Plants	7.30%
Aquatic	Environmental → Aquatic	6.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.13%
Freshwater	Environmental → Aquatic → Freshwater	6.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.26%
Loam	Environmental → Terrestrial → Soil → Loam	8.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.19%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.38%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.73%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001143	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011081	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023672	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_08433892	2228664022	Soil	MDFVHHFRDMLITLEAVRAEATLVMENFDDFARWRRLLASTGKTLKIFNPT
F24TB_110056201	3300000550	Soil	SRSTFGQMDFVSHFRDLLIASEAMRTGATLVTENSRDFARWKSLLVSARXXXXXXXXX*
JGI1027J12803_1049630264	3300000955	Soil	MDFVHHFRDMLITLEAVRAEATLVMENFDDFARWRRLLASTGKTLKIFNPT*
JGI12687J13287_1018021	3300001143	Forest Soil	MGQMDFVGHFRDLLITLEVARADATLVTENFGDFERWKRLLASTGKTLKLFNPM*
JGI25385J37094_101505202	3300002558	Grasslands Soil	RHFRDLLIALEAAQAGATLVTENARNFTRWKSFLSSTRKTLKLFEPSKTV*
JGI25390J43892_100421733	3300002911	Grasslands Soil	IALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPSKRKEFARG*
JGI25617J43924_100077371	3300002914	Grasslands Soil	RHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPSKRKEFARG*
JGI25616J43925_100718623	3300002917	Grasslands Soil	EAVQAGATLVTENARDFARWKSLLNSTGKTLKLFKPSKTT*
Ga0066677_100745061	3300005171	Soil	VRHFRDLLIALEAVRAGATLVTENARDFARWKSLLASSRKTLKLFKPSKTT*
Ga0066685_111143241	3300005180	Soil	LLIAMETVRTGATLATENLGDFERWKSLLASAKKTLNLFEPS*
Ga0066686_111313532	3300005446	Soil	LLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPSKRKEFARG*
Ga0066681_101116121	3300005451	Soil	IAQEAVRARATLVTENAGDFVRWKALLARMRTTLRIFKPS*
Ga0070732_104168282	3300005542	Surface Soil	MDFVRHFRDLLIAVEAVRAGATLVTENVGDFTRWRTLLAATKYTLKVFKPS*
Ga0070665_1000489943	3300005548	Switchgrass Rhizosphere	MLLLRASDTLGQMDFAQHFLDLLIALETSRCGATLLTENIADFSRWKSLLAARRKTLKLFDPA*
Ga0070704_1003834282	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDFASHFRDLLIASEALRTGATLVTENSRDFARWKSLLASARKTLKLFNPS*
Ga0066699_103923871	3300005561	Soil	LIALEAAQAGATLVTENARNFTRWKSFLSSTRKTLKLFEPSKTV*
Ga0066702_108660092	3300005575	Soil	YGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFDPSKRKEFARG*
Ga0068852_1024227052	3300005616	Corn Rhizosphere	MDFAQHFLDLLIALETSRCGATLLTENIADFSRWKSLLAARRKTLKLFDPA*
Ga0066905_1012575652	3300005713	Tropical Forest Soil	MLLLRASDTLGQMDFAQHFLDLLIALERSRCGATLLTENIADFSRWKSLLAARRKTLKLFDPA*
Ga0068863_1003110361	3300005841	Switchgrass Rhizosphere	MLLLRASDTLGQMDFAQHFRDLLIALETSRCGATLLTENIADFSRWKSLLAARRKTLKLFDPA*
Ga0066651_105972932	3300006031	Soil	AAQAGATLVTENARDFARWKSLLASSRKTLKLFKPSKTT*
Ga0066656_109838392	3300006034	Soil	RDLLIAMEAVRTGATLVTENARDFARWRSLLASAGRTLKVFNPS*
Ga0070716_1009278262	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RDLLIATEAVRAGATLVTENAGDFARWRALLASAGRTLKVFNPS*
Ga0066660_117176642	3300006800	Soil	FVRHFRDLLIALEAAQAGATLVTENARNFTRWKSFLSSTRKTLKLFEPSKTV*
Ga0099793_100580811	3300007258	Vadose Zone Soil	HFRDLLIALEAAQAGATLVTENVRDFARWKSLLASTRKTVKLFNASKTE*
Ga0099793_104600962	3300007258	Vadose Zone Soil	LIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA*
Ga0099794_104283521	3300007265	Vadose Zone Soil	ILLRRARSAFGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA*
Ga0099794_104618881	3300007265	Vadose Zone Soil	QAGATLVTENARDFARWKSLLGSARKTLKLFEPSKTA*
Ga0066710_1023001101	3300009012	Grasslands Soil	LIAQEAVRARATLVTENARDFVRWKVLLARMRTTLRIFKPS
Ga0099830_107878152	3300009088	Vadose Zone Soil	VRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASARKTLKLFEPSKTA*
Ga0099830_109278192	3300009088	Vadose Zone Soil	LLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA*
Ga0099830_110424721	3300009088	Vadose Zone Soil	RARSAYGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPSKRKEFARG*
Ga0099828_102378101	3300009089	Vadose Zone Soil	ARSAYGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLSSTRKTLKLFNASKTA*
Ga0105245_123041101	3300009098	Miscanthus Rhizosphere	MDFVRHFRDLLIALEASRANATLVTENVDDFERWKGLLLSARKTLKLF
Ga0099792_107983642	3300009143	Vadose Zone Soil	IALEAAQAGATLVTENARDFARWKSLLASSRKPLKLFNASKTA*
Ga0105248_108277652	3300009177	Switchgrass Rhizosphere	RSRSTFGRMDFASHFRDLLIASEALRTGATLVTENSRDFARWKSLLASARKTLKLFNPS*
Ga0116221_12900811	3300009523	Peatlands Soil	LRRARSTFGEMDFVQHFRDLLIALEAARLGATLVTENIRDFARWASLLASTRKTLRLFDPSRSS*
Ga0126374_107496232	3300009792	Tropical Forest Soil	FGQMHFARHFRDLLIAVQASRAGATLVTENVGDFARWRSILASAKKTLKLFKPS*
Ga0116219_106929391	3300009824	Peatlands Soil	LFGQMDFVRHFRDMLIAVEATRAGATLVTENTGDFARWRSLFASAKKNFKLFTP*
Ga0116223_103281921	3300009839	Peatlands Soil	MDFVQHFRDLLIALEAARLGATLVTENIRDFARWASLLASTRKTLRLFDPSRSS*
Ga0134084_100580603	3300010322	Grasslands Soil	SAYGQMDFVRHFRDLLIALEAVQAGATLVTENARDFARWKSLLASTRKTLKLFDPSKRKEFARG*
Ga0134086_102856893	3300010323	Grasslands Soil	FRDLLIALEAVRAGATLVTENARDFARWKSLLASSRKTLKLFKPSKTT*
Ga0134062_103013471	3300010337	Grasslands Soil	MDFVHQFRDLLIAMETVRTGATLATENLGDFERWKSLLASAKKTLNLFEPS*
Ga0074045_100217308	3300010341	Bog Forest Soil	MGQMDFVGHFRDLLITVEAARADATLVTENFRDFERWKRLLASTGKTLKLFNPM*
Ga0126372_116765422	3300010360	Tropical Forest Soil	MDFVRHFRDLLIALEASRADATLVTENLDDFERWKGLLQSASRTLKLFSPSLLI*
Ga0126378_101101022	3300010361	Tropical Forest Soil	MDFVRHFRDLLIALEASRADATLVTENLDDFERWKSLLQSADKRLKLFSPSLLI*
Ga0134066_103736151	3300010364	Grasslands Soil	RARSAFGQMDFVRHFRDLLIALEAVRAGATLVTENARDFARWKSLLASSRKTLKLFKPSKTT*
Ga0126379_121538211	3300010366	Tropical Forest Soil	FVRHFRDLLIALEASLADATLVTENFDDFERWKSLLHSANKTLKLFCPSLLI*
Ga0126381_1030390531	3300010376	Tropical Forest Soil	MDFVSHFRDLLITVEAARAGATLVTENFRDFARWKVLLASAGKTLKLFNPTSIRG*
Ga0138575_11975231	3300011081	Peatlands Soil	HHFRDVLIALEAVREEATLVTENTRDFERWRALLASANKTLRLVDASRAS*
Ga0137392_106538411	3300011269	Vadose Zone Soil	RARSAYGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPPKRKEFARG*
Ga0137392_116079741	3300011269	Vadose Zone Soil	RARSAYGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLSSTRKTLKLFNASKTA*
Ga0137392_116250322	3300011269	Vadose Zone Soil	ALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA*
Ga0137391_108557613	3300011270	Vadose Zone Soil	EAAQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA*
Ga0137393_114971512	3300011271	Vadose Zone Soil	FVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA*
Ga0137363_116127032	3300012202	Vadose Zone Soil	IALEAAQAGATLVTENARDFARWKSLLTSTRKTLKLFNASKTA*
Ga0137399_106185173	3300012203	Vadose Zone Soil	FGQMDFVSHFRDLLIASEAMRTGATLVSENSRDFARWKSLLVSSRKTLKLFNPS*
Ga0137362_100779774	3300012205	Vadose Zone Soil	MDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPPKTA*
Ga0137362_100794384	3300012205	Vadose Zone Soil	HGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASSRKPLKLFNASKTA*
Ga0137362_101491651	3300012205	Vadose Zone Soil	RHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA*
Ga0137380_110248091	3300012206	Vadose Zone Soil	ALEAAQAGATLVTENARDFARWKSLLASARKTLKLFDASKTA*
Ga0137381_103338252	3300012207	Vadose Zone Soil	YGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASARKTLKLFDASKTA*
Ga0137381_111010152	3300012207	Vadose Zone Soil	MDFVHQFRDLLIAMEAVRTGATLATENLGDFERWKSPLASARKTLNLFEPS*
Ga0137376_100801194	3300012208	Vadose Zone Soil	RDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPSKRKEFARG*
Ga0137386_106961141	3300012351	Vadose Zone Soil	AQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA*
Ga0137385_102768341	3300012359	Vadose Zone Soil	TSGDIDFVHHFRDLLIAVEAVRSRATLVTENVVHFARWRSLLASASKTLRLFNPS*
Ga0137361_101315845	3300012362	Vadose Zone Soil	YGQMDFVRHFRDLLIALEAAQAGATLITENARDFARWKSLLSSTRKTLKLFKPSKTT*
Ga0137361_104319382	3300012362	Vadose Zone Soil	YGQMDFVRHFRDLLIALEAAQAGATLITENARDFARWKSLLASTRKTLKLFKPSRTT*
Ga0137361_106678302	3300012362	Vadose Zone Soil	DLLIALEAAQAGATLVTENARDFARWKSLLTSTRKTLKLFNASKTA*
Ga0137358_100273071	3300012582	Vadose Zone Soil	FVSHFRDLLIASEAMRTGATLVSENSRDFARWKSLLVSSRKTLKLFNPS*
Ga0137396_101631501	3300012918	Vadose Zone Soil	GQMDFVRHFRDLLIALEAAQAGATLVTENVRDFARWKSLLASTRKTLKLFKPSKTT*
Ga0137396_110626532	3300012918	Vadose Zone Soil	RARSAYGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASSRKPLKLFNASKTA*
Ga0137396_113118561	3300012918	Vadose Zone Soil	LIALEAAQAGATLVTENVRDFARWKSLLASTRKTVKLFNASKTA*
Ga0137359_113298721	3300012923	Vadose Zone Soil	GQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA*
Ga0137359_116610232	3300012923	Vadose Zone Soil	RHFRDLLIALEAAQAGATLVTENARDFARWKSLLASSRKPLKLFNASKTA*
Ga0137359_117212711	3300012923	Vadose Zone Soil	HFRDLLIASEAMRTGATLVTENSRDFARWKSLLASARKTLKLFNPS*
Ga0137410_103327622	3300012944	Vadose Zone Soil	AYGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA*
Ga0126375_100866761	3300012948	Tropical Forest Soil	LRRARSRFGQMDCVRHFRGLLIALEASRADATLVTENHDDFERWQDLLHSVRKSLKLFSPSLLA*
Ga0134081_100720613	3300014150	Grasslands Soil	GAYGQMDFVRHFRDLLIALEAVQAGATLVTENARDFARWKSLLASTRKTLKLFDPSKRKEFARG*
Ga0134073_101009731	3300015356	Grasslands Soil	LIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPSKTV*
Ga0134073_102653991	3300015356	Grasslands Soil	HFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFDPSRVGAEGES*
Ga0132255_1047190312	3300015374	Arabidopsis Rhizosphere	RDLLIALEASRADATLVTENVDDFERWKGLLLSARKTLKLFSSSLLT*
Ga0182035_117556412	3300016341	Soil	MDFVHHFRDLLIAVEAVRAGATLVTENVGDFGRWRSLFASARKSLKVFSPL
Ga0187802_100839233	3300017822	Freshwater Sediment	MLFSTHLRDLLIALEAVRAHATLVTENIRDFVRWKSLLASAGRTLR
Ga0187820_12986851	3300017924	Freshwater Sediment	IAVEAVRARATLVTEDAGDFARWRTLFASSRKILKLFHPS
Ga0187814_104538222	3300017932	Freshwater Sediment	FVRHFRDLLIAVEATRAGATLVTENTGDFERWRSVLASAKKTLKLFKPSAAWRQ
Ga0187853_104067031	3300017940	Peatland	RARNAFGQLDFVHHFRDLLIALEAAREGATLVTENARDFTRWRSLLASAQKTLRLFDPSQTT
Ga0187819_105350411	3300017943	Freshwater Sediment	RAFGQMDFVRHFRDLLIALEAARAGATLVTENARDFSRWKSLLASTRKTLKLFEPAGTT
Ga0187783_105040772	3300017970	Tropical Peatland	RRAGSAVGKMDFVHHFRDLLIGEEAVRARATLVTENVTDFARWQSLLASAGKTLKLFDPS
Ga0187781_111976482	3300017972	Tropical Peatland	VRARSAFGQIDIVHHFRNLLIALEAVRERATLVTENVRDFAGWRSLLASTQKTLRLLDPS
Ga0187804_102214671	3300018006	Freshwater Sediment	RRTFGQMLFSTHLRDLLIALEAVRAHATLVTENIRDFVRWKSLLASAGRTLRVLNPSE
Ga0187810_100264523	3300018012	Freshwater Sediment	RMGYTGVLLRRARTLFGQMDFVRHFRDLLIAVEATRAGATLVTENTGDFERWRSVLASAKKTLKLFKPSAA
Ga0187873_12578211	3300018013	Peatland	AGILLRRASGTFGHMDFAHHFRDVLIALEAAREEATLVTQNTRDFERWRALLASANKTLRLFDASRAI
Ga0187869_106262541	3300018030	Peatland	DLLIALEAAREEATLVTENVRDFTRWRSLLASTQETLRLFDPSQAT
Ga0187769_103924553	3300018086	Tropical Peatland	RDLLIALEAARTGATLVTENISDFARWKSLLATSRQSLRLFNPSSPPG
Ga0187770_105263482	3300018090	Tropical Peatland	AEVWIQAGGLLRRARSLFGELGFMHHFRDALIALEAAHARATLVTEDVADFVRWKSLIASAGMTLKLFTPS
Ga0210403_100265765	3300020580	Soil	VDFASHFRDLLIASEALQTGATLLTENSRDFARWKSLLASARKTLKLFNPS
Ga0210399_101343641	3300020581	Soil	LEAAQAGATLVTENARDFASWKSLLASTRKTLKLFNASKINPGGDRNF
Ga0210404_100949454	3300021088	Soil	RHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPPKRKEFARG
Ga0210385_102109472	3300021402	Soil	FRDLLISLEAVRAKATLVTENARDFARWTSLLVSSGKSLKLFHPS
Ga0210409_113516612	3300021559	Soil	GQMDFVRHFRDLLIALEAAQAGATLVTENARDFALWKSLLASTRKTLKLFEPSKGKEFAR
Ga0247553_1072133	3300023672	Soil	LRRARSVFGKMDFVRNFRDLLISVEAMRVGATLVTENLKDFTRWKSLLASTRKRLNLFR
Ga0224572_10902431	3300024225	Rhizosphere	KMDFVRNFRDLLISVEAMRVGATLVTENLKDFTRWKSLLASTRKRLNLFRPSNTT
Ga0207671_111630332	3300025914	Corn Rhizosphere	MLLLRASDTLGQMDFAQHFLDLLIALETSRCGATLLTENIADFSRWKSLLAARRKTLKLFDPA
Ga0207693_100571364	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ASHFRDLLIASEALRTGATLVTENSRDFARWKSLLASARKTLKLFNPS
Ga0207663_111573101	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	IASEAMRMGATLVTENCRDFARWKSLLVSARKRLKLFNPS
Ga0207711_113702112	3300025941	Switchgrass Rhizosphere	RSRSTFGRMDFASHFRDLLIASEALRTGATLVTENSRDFARWKSLLASARKTLKLFNPS
Ga0207641_102807883	3300026088	Switchgrass Rhizosphere	MLLLRASDTLGQMDFAQHFRDLLIALETSRCGATLLTENIADFSRWKSLLAARRKTLKLFDPA
Ga0209240_11121013	3300026304	Grasslands Soil	MDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASARKTLKLFEPSKRKEFARG
Ga0209131_10273981	3300026320	Grasslands Soil	HFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKVFEPSKRKEFARG
Ga0209266_12696263	3300026327	Soil	FRDLLIALEAVRAGATLVTENARDFARWKSLLASSRKTLKLFKPSKTT
Ga0209803_10820891	3300026332	Soil	ARSAYGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPSKRKEFARG
Ga0209804_10230737	3300026335	Soil	YGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFDPSKRKEFARG
Ga0257176_10476951	3300026361	Soil	FRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPSKRKEFARG
Ga0257165_10854551	3300026507	Soil	GQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFEPSKRKEFAR
Ga0179587_100954931	3300026557	Vadose Zone Soil	YGQVDFVRHFRDLLIALEAAQVGATLVTENARDFARWKSLLASTRKTLKLFEPSKRKEFARG
Ga0179587_106344991	3300026557	Vadose Zone Soil	AVEAVRARATLVTENAGDFARWRSLLASSRKILKLFDPSQK
Ga0209220_10211292	3300027587	Forest Soil	LLIAVEAVRARATLVTENAGDFARWRTLLASSRKVLKLFDPS
Ga0209420_10890643	3300027648	Forest Soil	RSVFGKMDFAHHFRDLLIAAEAVGARATLVTENVGDFARWKSLFASARKSLKLFDPS
Ga0209701_103292291	3300027862	Vadose Zone Soil	MDFVRHFRDLLIALEVAQAGATLVTENARDFARWKSLLASTRKTLKLFEPSKRKEFARG
Ga0209488_106119241	3300027903	Vadose Zone Soil	ILLRRARSAFGQMDFVRHFRDLLIALEAAQAGATLVTENARDFARWKSLLASTRKTLKLFNASKTA
Ga0308309_103083012	3300028906	Soil	ARSAYGQIDFAHHFRDLLIAVEAVRARATLVTENAGNFALWRSLLASSRKILKLFHPSCPLKSA
Ga0310039_103548141	3300030706	Peatlands Soil	RHFRDMLIAVEATRAGATLVTENTGDFARWRSLFASAKKNFKLFTP
Ga0265760_102651982	3300031090	Soil	LNHFRDLLIALEAVRAKATLVTENVRDFTRWRSLLASSRKILKLFHPSKTQS
Ga0170823_147148941	3300031128	Forest Soil	QMDFISHFRDLLIASEAMRTEATLVSENSRDFARWKSLLVSSRKTLKLFNPS
Ga0310915_101391043	3300031573	Soil	MDFVRHFRDVLIALEASRADATLVTENLNDFERWKSMLQSANETLKLFSSSLLT
Ga0307476_100499265	3300031715	Hardwood Forest Soil	MHFAHHFRDVLIAEEAARAGATLVTENVKDFERWRGLLAAGKKRLKLFDPC
Ga0307477_107094452	3300031753	Hardwood Forest Soil	ILLRRSRSTFGQMDFVSHFRDLLIASEAMRTGATLVTENSRDFARWKSLLVSARKTLKLFNPS
Ga0306923_116363961	3300031910	Soil	LLRRSRSTFGPMDFAHHFRDLLIALEAARADATLVTQNLRDFARWRSLLASTRKTLRLFNPSHAT
Ga0310916_100770881	3300031942	Soil	IALEASRAVATLVTENLNDFERWKSMLQSANETLKLFSSSLLT
Ga0318533_105043341	3300032059	Soil	IDFVHHFRDLLIAVETVQLGATLVTENVGDFGRCKSLFASARRTLKVFDPS
Ga0311301_107683814	3300032160	Peatlands Soil	MDFVQHFRDLLIALEAARLGATLVTENIRDFARWASLLASTRKTLRLFDPSRSS
Ga0307471_1007547792	3300032180	Hardwood Forest Soil	GILLRRSRSTFGQMNFGCHFRDLLIASEALRTGATLVTENSRDFARWKSLLASARKTLKLFNPS
Ga0306920_1022042861	3300032261	Soil	TFGPMDFAHHFRDLLIALEAARADATLVTQNLRDFARWRSLLASTRKTLRLFNPSHAT
Ga0335081_1003409810	3300032892	Soil	GILLRRARSTFGEMDFVQHFRDLLIALEAARVGATLVTENIRDFSRWSSLLASTRKTLRLFDPSRSS
Ga0335072_100763881	3300032898	Soil	LRRASTVFGRLDFARHFRDLLIVMEASRAAATLVTENVRHFARWKSLLAPARKPLKLFTL
Ga0314861_0348680_448_612	3300033977	Peatland	MDFVRHFRDLLIALEAVLAGATLVTENLADFMRWKSLLASAGKTLRLFDPSQAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056831

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences