Metagenome / Metatranscriptome Family F056775

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056775
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	58 residues
Representative Sequence	MKALVSWEDAEGMTHRFQIAYDPDDAEARLFLEGIELHVRFRLETFDAESDAS
Number of Associated Samples	101
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.56 %
% of genes near scaffold ends (potentially truncated)	21.90 %
% of genes from short scaffolds (< 2000 bps)	69.34 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.292 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.978 % of family members)
Environment Ontology (ENVO)	Unclassified (30.657 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.394 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.52% β-sheet: 17.28% Coil/Unstructured: 64.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF14417	MEDS	30.66
PF02861	Clp_N	24.82
PF00199	Catalase	4.38
PF13185	GAF_2	3.65
PF12802	MarR_2	2.92
PF03861	ANTAR	2.92
PF13579	Glyco_trans_4_4	2.19
PF13463	HTH_27	2.19
PF06628	Catalase-rel	1.46
PF13796	Sensor	1.46
PF13439	Glyco_transf_4	1.46
PF02467	Whib	0.73
PF00384	Molybdopterin	0.73
PF07244	POTRA	0.73
PF00485	PRK	0.73
PF02129	Peptidase_S15	0.73
PF13466	STAS_2	0.73
PF03824	NicO	0.73
PF00578	AhpC-TSA	0.73
PF13472	Lipase_GDSL_2	0.73
PF04879	Molybdop_Fe4S4	0.73
PF03099	BPL_LplA_LipB	0.73
PF13183	Fer4_8	0.73
PF13345	Obsolete Pfam Family	0.73
PF02909	TetR_C_1	0.73
PF06224	HTH_42	0.73
PF00106	adh_short	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	24.82
COG0753	Catalase	Inorganic ion transport and metabolism [P]	5.84
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	2.92
COG0095	Lipoate-protein ligase A	Coenzyme transport and metabolism [H]	0.73
COG0321	Lipoate-protein ligase B	Coenzyme transport and metabolism [H]	0.73
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	0.73
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.73
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.29 %
Unclassified	root	N/A	19.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.29 %
Unclassified	root	N/A	19.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.29 %
Unclassified	root	N/A	19.71 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	76.64 %
Unclassified	root	N/A	19.71 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73.72 %
Unclassified	root	N/A	19.71 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.04 %
Unclassified	root	N/A	19.71 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	13.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.71 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	13.87 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6.57 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.65 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.92 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.19 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.71 %
unclassified Nitriliruptorales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales	13.87 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.65 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.19 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.46 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.73 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.71 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	13.87 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.19 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	1.46 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.73 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.73 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.73 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.71 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	13.87 %
Mycolicibacterium gilvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.19 %
Streptacidiphilus melanogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus melanogenes	1.46 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.73 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.73 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.73 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.73 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.71 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	13.87 %
Mycolicibacterium gilvum PYR-GCK	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum → Mycolicibacterium gilvum PYR-GCK	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.19 %
Streptacidiphilus melanogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus melanogenes	1.46 %
Streptomyces sp. So13.3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. So13.3	0.73 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.73 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.73 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.73 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001175\|JGI12649J13570_1000420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7493	Open in IMG/M
3300001635\|JGI20243J16304_101842	Not Available	525	Open in IMG/M
3300003505\|JGIcombinedJ51221_10002837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4846	Open in IMG/M
3300003505\|JGIcombinedJ51221_10231371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	750	Open in IMG/M
3300004091\|Ga0062387_100034812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2268	Open in IMG/M
3300005363\|Ga0008090_15179206	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1337	Open in IMG/M
3300005445\|Ga0070708_100447054	Not Available	1219	Open in IMG/M
3300005467\|Ga0070706_100666897	Not Available	965	Open in IMG/M
3300005591\|Ga0070761_10509120	Not Available	743	Open in IMG/M
3300005602\|Ga0070762_10337694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	958	Open in IMG/M
3300005602\|Ga0070762_10394944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	890	Open in IMG/M
3300005602\|Ga0070762_10461231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	828	Open in IMG/M
3300005610\|Ga0070763_10055823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1891	Open in IMG/M
3300005610\|Ga0070763_10687434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	598	Open in IMG/M
3300005712\|Ga0070764_10102484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. So13.3	1530	Open in IMG/M
3300005764\|Ga0066903_100173782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3158	Open in IMG/M
3300005764\|Ga0066903_100267620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2662	Open in IMG/M
3300006176\|Ga0070765_100167485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1973	Open in IMG/M
3300006176\|Ga0070765_100746388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	925	Open in IMG/M
3300007982\|Ga0102924_1003823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15599	Open in IMG/M
3300009090\|Ga0099827_10169710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1797	Open in IMG/M
3300009519\|Ga0116108_1004584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	6103	Open in IMG/M
3300010048\|Ga0126373_10288056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1633	Open in IMG/M
3300010154\|Ga0127503_10106947	Not Available	727	Open in IMG/M
3300010343\|Ga0074044_10072517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2329	Open in IMG/M
3300010343\|Ga0074044_10446599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	846	Open in IMG/M
3300010359\|Ga0126376_10150027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1866	Open in IMG/M
3300010361\|Ga0126378_11425426	Not Available	784	Open in IMG/M
3300010366\|Ga0126379_11919953	Not Available	695	Open in IMG/M
3300010376\|Ga0126381_102706763	Not Available	709	Open in IMG/M
3300010379\|Ga0136449_100432293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2319	Open in IMG/M
3300010398\|Ga0126383_10746688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1059	Open in IMG/M
3300011120\|Ga0150983_12404154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	662	Open in IMG/M
3300011404\|Ga0153951_1019513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1157	Open in IMG/M
3300012206\|Ga0137380_10435034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1161	Open in IMG/M
3300013294\|Ga0120150_1106871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus melanogenes	527	Open in IMG/M
3300016387\|Ga0182040_11807330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300017924\|Ga0187820_1208570	Not Available	612	Open in IMG/M
3300017941\|Ga0187850_10052262	Not Available	2105	Open in IMG/M
3300017970\|Ga0187783_10005075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9729	Open in IMG/M
3300017970\|Ga0187783_10023796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4534	Open in IMG/M
3300017970\|Ga0187783_10038606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3537	Open in IMG/M
3300017970\|Ga0187783_10439242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	947	Open in IMG/M
3300017972\|Ga0187781_10183515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1474	Open in IMG/M
3300017972\|Ga0187781_11062562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum → Mycolicibacterium gilvum PYR-GCK	593	Open in IMG/M
3300017975\|Ga0187782_10210322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1457	Open in IMG/M
3300018016\|Ga0187880_1052498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2171	Open in IMG/M
3300018060\|Ga0187765_10036502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2461	Open in IMG/M
3300018060\|Ga0187765_10767873	Not Available	640	Open in IMG/M
3300018060\|Ga0187765_11355262	Not Available	506	Open in IMG/M
3300018085\|Ga0187772_10032534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3108	Open in IMG/M
3300019888\|Ga0193751_1064750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus melanogenes	1515	Open in IMG/M
3300020581\|Ga0210399_10054571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3215	Open in IMG/M
3300020582\|Ga0210395_10026276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4275	Open in IMG/M
3300020582\|Ga0210395_10244977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1347	Open in IMG/M
3300021180\|Ga0210396_10639119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	923	Open in IMG/M
3300021180\|Ga0210396_11180632	Not Available	641	Open in IMG/M
3300021388\|Ga0213875_10332235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum → Mycolicibacterium gilvum PYR-GCK	721	Open in IMG/M
3300021402\|Ga0210385_10264114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1268	Open in IMG/M
3300021402\|Ga0210385_10337262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1123	Open in IMG/M
3300021402\|Ga0210385_10368229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300021402\|Ga0210385_11322089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum → Mycolicibacterium gilvum PYR-GCK	552	Open in IMG/M
3300021403\|Ga0210397_10291632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1196	Open in IMG/M
3300021407\|Ga0210383_10037888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4022	Open in IMG/M
3300021474\|Ga0210390_10386508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1183	Open in IMG/M
3300021477\|Ga0210398_11082266	Not Available	637	Open in IMG/M
3300021560\|Ga0126371_10056944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3757	Open in IMG/M
3300021560\|Ga0126371_10807499	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300022557\|Ga0212123_10010456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13081	Open in IMG/M
3300024220\|Ga0224568_1024612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300025453\|Ga0208455_1029376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1265	Open in IMG/M
3300025898\|Ga0207692_11210562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	502	Open in IMG/M
3300025906\|Ga0207699_10044649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2581	Open in IMG/M
3300025910\|Ga0207684_10075653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	2862	Open in IMG/M
3300025910\|Ga0207684_10338101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1297	Open in IMG/M
3300026551\|Ga0209648_10328235	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1071	Open in IMG/M
3300026555\|Ga0179593_1117627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3050	Open in IMG/M
3300026557\|Ga0179587_10327097	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300027072\|Ga0208238_1005060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1068	Open in IMG/M
3300027080\|Ga0208237_1027065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	865	Open in IMG/M
3300027110\|Ga0208488_1023192	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300027158\|Ga0208725_1001222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4657	Open in IMG/M
3300027334\|Ga0209529_1024989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1016	Open in IMG/M
3300027370\|Ga0209010_1022372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1099	Open in IMG/M
3300027505\|Ga0209218_1063269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300027590\|Ga0209116_1002270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4487	Open in IMG/M
3300027619\|Ga0209330_1060940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	860	Open in IMG/M
3300027681\|Ga0208991_1149552	Not Available	690	Open in IMG/M
3300027829\|Ga0209773_10088398	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300027853\|Ga0209274_10401035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	708	Open in IMG/M
3300027855\|Ga0209693_10460301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	611	Open in IMG/M
3300027882\|Ga0209590_10776119	Not Available	610	Open in IMG/M
3300027884\|Ga0209275_10362371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300027895\|Ga0209624_10029812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3466	Open in IMG/M
3300027895\|Ga0209624_10382720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	938	Open in IMG/M
3300027905\|Ga0209415_10144520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2413	Open in IMG/M
3300028906\|Ga0308309_10771397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	835	Open in IMG/M
3300030740\|Ga0265460_12960685	Not Available	511	Open in IMG/M
3300030813\|Ga0265750_1075805	Not Available	552	Open in IMG/M
3300031543\|Ga0318516_10647136	Not Available	602	Open in IMG/M
3300031545\|Ga0318541_10106089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1513	Open in IMG/M
3300031708\|Ga0310686_100574353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11471	Open in IMG/M
3300031708\|Ga0310686_117639249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1668	Open in IMG/M
3300031713\|Ga0318496_10539948	Not Available	644	Open in IMG/M
3300031718\|Ga0307474_10002083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14372	Open in IMG/M
3300031718\|Ga0307474_11558683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum → Mycolicibacterium gilvum PYR-GCK	519	Open in IMG/M
3300031751\|Ga0318494_10425916	Not Available	771	Open in IMG/M
3300031769\|Ga0318526_10116137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1077	Open in IMG/M
3300031770\|Ga0318521_10691840	Not Available	619	Open in IMG/M
3300031797\|Ga0318550_10607814	Not Available	525	Open in IMG/M
3300031798\|Ga0318523_10596410	Not Available	544	Open in IMG/M
3300031846\|Ga0318512_10745478	Not Available	503	Open in IMG/M
3300031912\|Ga0306921_12145008	Not Available	591	Open in IMG/M
3300031946\|Ga0310910_11122684	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300031954\|Ga0306926_10713131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1216	Open in IMG/M
3300032065\|Ga0318513_10217386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	922	Open in IMG/M
3300032067\|Ga0318524_10068298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1722	Open in IMG/M
3300032783\|Ga0335079_10048596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4862	Open in IMG/M
3300032783\|Ga0335079_10144253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2675	Open in IMG/M
3300032783\|Ga0335079_10661808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1095	Open in IMG/M
3300032805\|Ga0335078_10006326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17538	Open in IMG/M
3300032805\|Ga0335078_10063006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	5443	Open in IMG/M
3300032805\|Ga0335078_10514736	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1533	Open in IMG/M
3300032805\|Ga0335078_10692866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1264	Open in IMG/M
3300032895\|Ga0335074_10003788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20754	Open in IMG/M
3300032895\|Ga0335074_10009947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13289	Open in IMG/M
3300032895\|Ga0335074_10032898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7253	Open in IMG/M
3300032895\|Ga0335074_10405133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1477	Open in IMG/M
3300032895\|Ga0335074_10443264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1381	Open in IMG/M
3300032896\|Ga0335075_10144186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2989	Open in IMG/M
3300032896\|Ga0335075_10513418	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1220	Open in IMG/M
3300032896\|Ga0335075_11152577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300032896\|Ga0335075_11247752	Not Available	640	Open in IMG/M
3300032898\|Ga0335072_10126870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3189	Open in IMG/M
3300032898\|Ga0335072_10126992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3187	Open in IMG/M
3300032955\|Ga0335076_10019632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6786	Open in IMG/M
3300033134\|Ga0335073_10145249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3011	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.54%
Host-Associated	Host-Associated	1.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.24%
Aquatic	Environmental → Aquatic	7.30%
Plants	Host-Associated → Plants	0.73%
Fungi	Host-Associated → Fungi	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.51%
Freshwater	Environmental → Aquatic → Freshwater	5.84%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.46%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.73%
Roots	Host-Associated → Plants → Roots	0.73%
Mycelium	Host-Associated → Fungi → Mycelium	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.69%
Loam	Environmental → Terrestrial → Soil → Loam	27.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.11%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.46%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.73%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.73%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	24.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.46%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.73%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.73%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.73%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	14.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.41%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.19%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.46%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.46%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.73%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.73%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.73%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.73%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.73%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001635	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024220	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027072	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013 (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12649J13570_10004202	3300001175	Forest Soil	MKALVSWEDAEGAVHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADADASRTEGL*
JGI20243J16304_1018421	3300001635	Forest Soil	WEDGGGVTHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADADASRTKGPTGEEL*
JGIcombinedJ51221_100028373	3300003505	Forest Soil	MRALVSWEDAEGMTHRFQIAYDPDDAEARQFLEGLELGVRFRLETFDADADAS*
JGIcombinedJ51221_102313711	3300003505	Forest Soil	MKALVSWEDGGGVTHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADADASRTKGPTGEEL*
Ga0062387_1000348123	3300004091	Bog Forest Soil	VKALISWEDANGATHRFQVAYDPDDAEARYFLEGLELHVRFRLEAFDVDIDGDAGPAMDGPERP*
Ga0008090_151792062	3300005363	Tropical Rainforest Soil	VKALVSWEDANGVRHRFQIAYDPDDTEARYFLEGLELHVRFRLETFDADSGAAAGPGRPG
Ga0070708_1004470542	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKAIVSWEDANGGTHRFQITYDPDDAEARHFLEGIELHVRFRLETFDVEADAR*
Ga0070706_1006668973	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKAVITWEDSGGAKHRFQIAYDPDDAEARHFLEGIELHVRFRLETFDVEADAR*
Ga0070761_105091201	3300005591	Soil	MRALVSWEDAEGMTHRFQIAYDPDDAEARQFLEGLELGVRFRLETFD
Ga0070762_103376941	3300005602	Soil	QREAAMKALVRWEDAEGVTHRFQIGYDPEDAEARLFLEGIELHVRFRLETFDADADASRTEGPTREEL*
Ga0070762_103949442	3300005602	Soil	MRALVSWEDAAGTAHRWEIAYDPDDVEARHFLEGLELHIKFRLETFDAEADAI*
Ga0070762_104612312	3300005602	Soil	MKALVSWEDAGGVTHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADASRTEGPTGKSYD*
Ga0070763_100558232	3300005610	Soil	MKALVRWEDAEGVTHRFQIGYDPEDAEARLFLEGIELHVRFRLETFDADADASRTEGPTREEL*
Ga0070763_106874341	3300005610	Soil	VSWEDAQGIKHRWALAYDPDDAEARHFLEGLELHARFRLETFDAETDNAGTPERP*
Ga0070764_101024843	3300005712	Soil	MTGTPLEEAGMKALVSWDDAEGVTHRFQIAYDQDDAEARLFLEAIELHVRFRLETFDADADAG*
Ga0066903_1001737822	3300005764	Tropical Forest Soil	VKALVSWEDANGATHRFLIAYDPDDTEARYFLEGLELHVRFRLETFDADSGAAAALDGPDGP*
Ga0066903_1002676203	3300005764	Tropical Forest Soil	VKALVSWEDANGTTHRFQIVYDPDDVEARYFLAALELHARFRLETFDADSVASPALNEPEPP*
Ga0070765_1001674851	3300006176	Soil	QREAAMKALVSWEDAGGVTHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADASRTEGPTGKSYD*
Ga0070765_1007463882	3300006176	Soil	MRALVSWEDAAGTAHRWEIAYDPDDAEARHFLEGLELHIKFRLETFDAEADAI*
Ga0102924_10038238	3300007982	Iron-Sulfur Acid Spring	MRAVVSWEDAGGATHRWAVVYDPEDAEARHFLEGIELHARFRLETFDADAEADRAGEFR*
Ga0099827_101697102	3300009090	Vadose Zone Soil	MKALVSWDDENGTTHRWELAYDPDDAEARSFLEGIELHVHFRLESFDIEAGAARPDN*
Ga0116108_10045849	3300009519	Peatland	MRALVSWDDDQGTRHEWEISYDADDAGARQFLEAIQLHVRFRLESFDLDQLAE*
Ga0126373_102880561	3300010048	Tropical Forest Soil	MSAPGRVTGVKALVSWEDATGTTHRFRIAYNPDDAEARFFLEGLELHLRFRLETFDADGDAASALDAPEPP*
Ga0127503_101069472	3300010154	Soil	EVKALVSWEDANGTTHRFQIVYDPEDAESRYFLEGLELHVRFRLETFDADAAAPALNRLEQQ*
Ga0074044_100725172	3300010343	Bog Forest Soil	VKALISWEDANGTTHRFQVAYDPDDAEARYFLEGLELHVRFRLEAFDVDIDGDAGPAMDGPERP*
Ga0074044_104465992	3300010343	Bog Forest Soil	MKALVSWEDAQGVMHRFQIAYDPDDAEARYFLEAIELHVAFRLESFDTGADAG*
Ga0126376_101500272	3300010359	Tropical Forest Soil	MKAVVSWEDAQGTTHRWQVAYDADDAEARHFLEGLELHVRFRLETFDAEGDAAAAGPSSS
Ga0126378_114254262	3300010361	Tropical Forest Soil	VKALVSWEDANGVTHRFQIAYDPDDAEARYFLEGLELHVRFRLETFDVDSGAAAAPDGPDRP*
Ga0126379_119199531	3300010366	Tropical Forest Soil	MTSGGRGTPVKALVSWEDANGTTHRFQIAYDPDDAEARYFLAALELHARFRLETFDADSVARPALNGPESP*
Ga0126381_1027067632	3300010376	Tropical Forest Soil	VKALVSWEDANGVTHRFQTAYDPDDAEARYFLEGLELHVRFRLETFDVDSGAAAAPDGPDRP*
Ga0136449_1004322935	3300010379	Peatlands Soil	MKALVRWEDSNGTRHRWEIAYDPDDAEARHFLEGIELHLRFRLETFDVEADARQTS*
Ga0126383_107466881	3300010398	Tropical Forest Soil	MTSGGRGTDVKALVSWDDANGATHRFQIAYDPDDAEARYFLEALELHARFRLETFDAD
Ga0150983_124041542	3300011120	Forest Soil	MTGTPVEEAGMKALVSWDDAEGVTHRFQIAYDQDDAEARLFLEAIELHVRFRLETFDADAEAG*
Ga0153951_10195132	3300011404	Attine Ant Fungus Gardens	MKALVSWEDGEGATHRFQIGYDPDDAEARFFLEGIELHVRFRLETFDADADASRNEGL*
Ga0137380_104350342	3300012206	Vadose Zone Soil	MKALVSWDDAHGTRHRWQIAYEADDAEARHFLEGIELHVRFRLETFDADADAGESGRHRPEQTMS*
Ga0120150_11068712	3300013294	Permafrost	MKALVSWEDEKGTTHRWELAYDPDDAEARSFLEGIELRFRFRLESFDIDAGAVRAEN*
Ga0182040_118073302	3300016387	Soil	VKALVSWQDANGTTHRFLIAYDPDDAEARYFLEGLELHVRFRLETFDAEGDAAPVRGRLEPP
Ga0187820_12085701	3300017924	Freshwater Sediment	GRVTPVKALVTWEDANGTTHRFLIGYDPDDAEARFFLEGLELHVRFRLETFDADRAAAPALDAPEPP
Ga0187850_100522621	3300017941	Peatland	MRALVSWDDDQGTRHEWEISYDADDAGARQFLEAIQLHVRFRLESFDLDQ
Ga0187783_1000507510	3300017970	Tropical Peatland	VRALVSWEDADGTRHRFQIAYDPDDAEARYFLEGLELHVRFRVETFDIDSDTG
Ga0187783_100237965	3300017970	Tropical Peatland	VKALVSWEDAHGTTHRFQIAYDADDAEARYFLEGLELHVRFRLETFDASSDTGQDVRPAAGGPEGL
Ga0187783_100386064	3300017970	Tropical Peatland	MKALVSWEDADGVAHRFQIAYDPDDAEARLFLEALELHVKFRLESFDAEADAG
Ga0187783_104392421	3300017970	Tropical Peatland	VKALVSWEDADGTLRRFLIAYDPDDAEARYFLEGLELHVRFRLETFDADGDAGQDVRPAADRPERP
Ga0187781_101835153	3300017972	Tropical Peatland	MKALVSWDDAEGVTHRFQIVYDPDDAEARLFLEGIELHLRFRLETFDAEGDAS
Ga0187781_110625621	3300017972	Tropical Peatland	MKALVSREDANGVAHRFQIAYDPDDAEARLFLEALELHVKFRLESFDAEADAG
Ga0187782_102103222	3300017975	Tropical Peatland	VKALVSWEDADGTLRRFLIAYDPDDAEARYFLEGLELHVRFRLETFDASSDTGQDVRPAAGGPEGL
Ga0187880_10524981	3300018016	Peatland	ARLRRPMRALVSWDDDQGTRHEWEISYDADDAGARQFLEAIQLHVRFRLESFDLDQLAE
Ga0187765_100365024	3300018060	Tropical Peatland	MKALVSWEDANRATHRFQIAYDPGDAEARYFLEGLELHVRFRVETFDAGSDAGQDVRPAAGEPERP
Ga0187765_107678731	3300018060	Tropical Peatland	MKAVVSWEDAQGTTHRWQLAYDADDTEARHFLEGLELHVRFRLET
Ga0187765_113552621	3300018060	Tropical Peatland	MKAVVSWEDAQGTTHRWHVAYDADDAEARHFLEGLELHVRFRLETFDAEGDAAASGQLSS
Ga0187772_100325345	3300018085	Tropical Peatland	VKALVSWEDAGGTTHRFQIAYDPDDAEARYFLEGLERRVRFRLETFDIDNDTR
Ga0193751_10647502	3300019888	Soil	MKALVSWDDENGTTHRWELAYDPDDAEARSFLEGIELHFRFRLESFDIDAGAVRPEN
Ga0210399_100545711	3300020581	Soil	PAPRFGARNPGRGTQVKALVSWEDANGTTHRFHIVYDPDDVEARYFLEGLELRVRFRLETFDADGAAAAPDRPERP
Ga0210395_100262764	3300020582	Soil	MKALVSWEDGGGVTHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADADASRTKGPTGEEL
Ga0210395_102449772	3300020582	Soil	MTGTPLEEAGMKALVSWDDAEGVTHRFQIAYDQDDAEARLFLEAIELHVRFRLETFDADADAG
Ga0210396_106391191	3300021180	Soil	MTGTPVEEAGMKALVSWDDAEGVTHRFQIAYDQDDAEARLFLEAIELHVRFRLETFDADADAG
Ga0210396_111806322	3300021180	Soil	MKALVSWEDERGTTHRWQVPYDDDDEEARNFLAGIELHIRFRLESYDVDADAG
Ga0213875_103322352	3300021388	Plant Roots	MKALVSWEDGEGVTHRFRVAYDPDDAEARLFLEALELHVRLRLETFDAEADAGRPGGP
Ga0210385_102641142	3300021402	Soil	MRALVSWEDAEGMTHRFQIAYDPDDAEARQFLEGLELGVRFRLETFDADADAS
Ga0210385_103372622	3300021402	Soil	MKALVRWEDAEGVTHRFQIGYDPEDAEARLFLEGIELHVRFRLETFDADADASRTEGPTREEL
Ga0210385_103682292	3300021402	Soil	MTGTPLEEAGMKALVSWDDAEGVTHRFQIAYDQDDAEARLFLEAIELHVRFRLETFDADADAGRPGGP
Ga0210385_113220892	3300021402	Soil	MKALVTWDDAQGVTHRWEIGYDPDDAEARHFLEGLELHVRFRLESFDTGREGG
Ga0210397_102916322	3300021403	Soil	MKALVSWEDGEGTTHVFQIGYDPDDAEARLFLEGIELHVRFRLETFDADADASRTEGPTREEL
Ga0210383_100378884	3300021407	Soil	VKALVSWEDANGTTHRFHIVYDPDDVEARYFLEGLELRVRFRLETFDADGAAAASDRPER
Ga0210390_103865082	3300021474	Soil	MKALVSWEDGDGTTHVFQIGYDPDDAEARLFLEGIELHVRFRLETFDADADASRTEGPTREEL
Ga0210398_110822662	3300021477	Soil	MRALVSWEDAAGTAHRWEIAYDPDDVEARHFLEGLELHIKFRLETFDAEADAI
Ga0126371_100569444	3300021560	Tropical Forest Soil	VKALVSWEDANGATHRFLIAYDPDDTEARYFLEGLELHVRFRLETFDADSGAAAALDGPDGP
Ga0126371_108074993	3300021560	Tropical Forest Soil	VKALVSWEDANGVTHRFQIAYDPDDAEARYFLEGLELHVRFRLETFDVDSGAAAAPDGPDRP
Ga0212123_1001045614	3300022557	Iron-Sulfur Acid Spring	MRAVVSWEDAGGATHRWAVVYDPEDAEARHFLEGIELHARFRLETFDADAEADRAGEFR
Ga0224568_10246121	3300024220	Plant Litter	MKALVSWEDAEGVTHRFQIGYDPDDAEARLFLEGIELHVSFRLETFDADASRTEGL
Ga0208455_10293763	3300025453	Peatland	MRALVSWDDDQGTRHEWEISYDADDAGARQFLEAIQLHVRFRLESFDLDQLAE
Ga0207692_112105621	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	DAQGTTHRWQVAYDADDAEARHFLEGIELHVRFRLETFDAEGDAAAAGPSSP
Ga0207699_100446491	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKAVVSWEDAQGTMHRWQVAYDADDAEARHFLEGIELHVRFRLETFDAEGDAAAAGPSSP
Ga0207684_100756536	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKAIVSWEDANGGTHRFQITYDPDDAEARHFLEGIELHVRFRLETFDVEADAR
Ga0207684_103381012	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKAVITWEDSGGAKHRFQIAYDPDDAEARHFLEGIELHVRFRLETFDVEADAR
Ga0209648_103282353	3300026551	Grasslands Soil	MKAVITWEDSGGARHRFQIAYDPDDAEARHFLEGIELHVRFRLETFDVEADAR
Ga0179593_11176274	3300026555	Vadose Zone Soil	MKALVSWEDAAGTAHRWEIAYDPDDAEARHFLEGLELHVKFRLETFDTETDAQAGAS
Ga0179587_103270971	3300026557	Vadose Zone Soil	REVPMKAVVTWEDSDGARHRFQIAYDPDDAEARHFLEGIELHVRFRLETFDVEADAR
Ga0208238_10050602	3300027072	Forest Soil	MRALVSWEDAEGMTHRFQIAYDPDDAEARQFLEGLELGVRFRLETFDADASRTEGPTGKSYD
Ga0208237_10270651	3300027080	Forest Soil	MKALVSWEDAGGVTHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADADASRTKGPTGEEL
Ga0208488_10231922	3300027110	Forest Soil	MKALVSWEDGDGTTHVFQIGYDPDDAEARLFLEGIELHVRFRLETFDADADASRTKGPTGEEL
Ga0208725_10012222	3300027158	Forest Soil	MKALVSWEDGGGVTHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADADASRTEGPTREEL
Ga0209529_10249892	3300027334	Forest Soil	MKALVSWEDAEGAVHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADASRTEGL
Ga0209010_10223722	3300027370	Forest Soil	MKALVSWEDAEGAVHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADADASRTEGL
Ga0209218_10632691	3300027505	Forest Soil	VKALVSWEDAQGIKHRWAIAYDPGDAEARHFLEGLELHARFRLETFDAEADNAGTPERL
Ga0209116_10022705	3300027590	Forest Soil	MRALVSWEDAEGVTHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADASRTEGL
Ga0209330_10609401	3300027619	Forest Soil	MRALVSWEDAAGTAHRWEIAYDPDDAEARHFLEGLELHIKFRLETFDADADASRTEGPTREEL
Ga0208991_11495521	3300027681	Forest Soil	MKAVVTWEDSDGARHRFQIAYDPDDAEARHFLEGIELHVRFRLETFDVEADAR
Ga0209773_100883982	3300027829	Bog Forest Soil	VKALISWEDANGATHRFQVAYDPDDAEARYFLEGLELHVRFRLEAFDVDIDGDAGPAMDGPERP
Ga0209274_104010352	3300027853	Soil	AEGVTHRFQIAYDQDDAEARLFLEAIELHVRFRLETFDADADAGRPGGP
Ga0209693_104603011	3300027855	Soil	VSWEDAQGIKHRWALAYDPDDAEARHFLEGLELHARFRLETFDAETDNAGTPERP
Ga0209590_107761192	3300027882	Vadose Zone Soil	MKALVSWDDENGTTHRWELAYDPDDAEARSFLEGIELHVHFRLESFDIEAGAARPDN
Ga0209275_103623712	3300027884	Soil	MKALVSWEDAGGVTHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADASRTEGPTGKSYD
Ga0209624_100298125	3300027895	Forest Soil	MRALVSWEDAAGTAHRWEIAYDPDDAEARHFLEGLELHIKFRLETFDAEADAI
Ga0209624_103827202	3300027895	Forest Soil	MKALVSWDDAEGVTHRFQIAYDQDDAEARLFLEAIELHVRFRLETFDAEADAG
Ga0209415_101445206	3300027905	Peatlands Soil	MKALVRWEDSNGTRHRWEIAYDPDDAEARHFLEGIELHLRFRLETFDVEADARQTS
Ga0308309_107713972	3300028906	Soil	MKALVSWDDAEDVTHRFQITYDQDDAEARLFLEAIELHVRFRLETFDADADAG
Ga0265460_129606852	3300030740	Soil	MKALVSWEDAEGVTHRFQIGYDPDDAEARLFLEGIELHVRFRLETFDADASRTEGL
Ga0265750_10758051	3300030813	Soil	MRARPEREAAMKALVSWEDAEGVTHRFQIGYDPDDAEARLFLEGIELHVSFRLETFDADASRTEGL
Ga0318516_106471362	3300031543	Soil	VKALVSWEDTNGATHRFQIAYDPDDAEARYFLEGLELHVRFRLETFDADSGTAAAVDGPDRP
Ga0318541_101060893	3300031545	Soil	LVVVSWEDANGATHRFRIAYDPDDAEARFFLEGLELHVRFRLETFDADADAASAMDGPEP
Ga0310686_1005743539	3300031708	Soil	MRALVSWEDSDGTAHRWEIGYDPDDAEARHFLEGLELHVRFRLETFDAEADAS
Ga0310686_1176392492	3300031708	Soil	MKAIVSWEDAAGVTHRFRIAYDPDDAEARLFLEALELHVRFRLETFDAAADAG
Ga0318496_105399481	3300031713	Soil	LVSWEDANGATHRFRIAYDPDDAEARYFLEGLELHVRFRLETFDAEGDAAPVRGRLEPP
Ga0307474_1000208311	3300031718	Hardwood Forest Soil	VKALVSWEDAAGTKHRWAVAYDPEDPEARHFLEAIELHARFRLETFDTEAADNVTTPERP
Ga0307474_115586831	3300031718	Hardwood Forest Soil	VKALVSWDDAAGTRHRWAIAYDPDDAEARHFLEALELRAQFRLETFDAEAEGNVTTPE
Ga0318494_104259162	3300031751	Soil	VKALVSWEDANGATHRFRIAYDPDDAEARYFLEGLELHVRFRLETFDAEGDAAPVRGRLEPP
Ga0318526_101161372	3300031769	Soil	VKALVSWQDANGTTHRFLIAYDPDDAEARFFLEGLELHVRFRLETFDADADAASAMDGPEPP
Ga0318521_106918401	3300031770	Soil	RVTRVKALVSWEDANGATHRFRIAYDPDDAEARYFLEGLELHVRFRLETFDAEGDAAPVRGRLEPP
Ga0318550_106078141	3300031797	Soil	MKALVSWEDANGTAHRFQIVYDPDDAEARYFLEGLELHARFRLETFD
Ga0318523_105964101	3300031798	Soil	RRGVRANPGPATRFGARNPGRGTQMKALVSWEDANGTAHRFQIVYDPDDAEARYFLEGLELHARFRLETFDADGDAAAAPGRREEQ
Ga0318512_107454781	3300031846	Soil	VSWEDANGATHRFRIAYDPDDAEARYFLEGLELHVRFRLETFDAEGDAAPVRGRLEPP
Ga0306921_121450081	3300031912	Soil	LVSWEDANGATHRFRIAYDPDDAEARYFLEGLELHVRFRLETFDAEGD
Ga0310910_111226841	3300031946	Soil	ETQVKALVSWDDANGATHRFQIAYDPDDAEARYFLEGLELHVRFRLETFDADSGTAAAVDGPDRP
Ga0306926_107131312	3300031954	Soil	VKALVSWQDANGTTHRFLIAYDPDDAEARFFLEGLELHVRFRLETFDADGALDAPEPQ
Ga0318513_102173861	3300032065	Soil	PGRVTQVKALVSWQDANGTTHRFLIAYDPDDAEARFFLEGLELHVRFRLETFDADGALDAPEPQ
Ga0318524_100682981	3300032067	Soil	AAPGRVTQVKALVSWQDANGTTHRFLIAYDPDDAEARFFLEGLELHVRFRLETFDADADAASAMDGPEPP
Ga0335079_100485963	3300032783	Soil	VKALVSWDDAQGATHRFQIAYDPDDVEARHFLEGLEMHVRFRLETFDADGQPPP
Ga0335079_101442532	3300032783	Soil	VKALVSWEDADGIRHRFQIAYDPDDAEARYFLEGLELHVRFRLETFDVGGDAG
Ga0335079_106618082	3300032783	Soil	MKAVVSWEDMQGTTHRWHIAYDPDDAEARHFLEGIELHVQFRLETFDADADAAAAGP
Ga0335078_100063268	3300032805	Soil	VKALVSWEDASGMTHRWEIAYDPQDAEARHFLEGLELHVRFRLETFDAGADAADRS
Ga0335078_100630062	3300032805	Soil	MKALVSWDDGEGVTHRFQIAYDPDDAEARLFLEAIELHVRFRLETFDAEADAG
Ga0335078_105147362	3300032805	Soil	VKALVSWDDAEGATHRFQIAYDPDDVEARHFLEGLEMHVRFRLETFDVDGQSPP
Ga0335078_106928662	3300032805	Soil	MKALVSWDDAEGVTHRFQIVYDPDDVEARGFLEGIELHVRFRLETFDAEGNASWPEVP
Ga0335074_1000378812	3300032895	Soil	MKALVSWEDAEGMTHRFQIAYDPDDAEARLFLEGIELHVRFRLETFDAESDAS
Ga0335074_100099472	3300032895	Soil	VKALVSWEDPEGTKHRWAIAYDPDDVEARHFLEGLELHARFRLETFDADAAGNVATPERP
Ga0335074_100328985	3300032895	Soil	VKALVSWEDAEGTKHRWAVAYDPDDPEARHFLEAIELHARFRLETFDLEADDATQGRP
Ga0335074_104051331	3300032895	Soil	MKALVSWDDGDGVTHRFQIAYDPDDAEARLFLEAIELHVRFRLETFDAESDAR
Ga0335074_104432642	3300032895	Soil	MNALVSWEDAAGVTHRFLIAYDPDDAEARLFLEGIELHARFRLESFDAGADAG
Ga0335075_101441862	3300032896	Soil	MKALVSWEDAEGVTHRFLIAYDPDDAEARGFLEGIELQVRFRLETFDAEGDAS
Ga0335075_105134181	3300032896	Soil	VSWEDAAGITHRWALAYDPDDVEARHFLEGLELHVRFRLETFDAADITGPERV
Ga0335075_111525772	3300032896	Soil	MNALVSWEDAEGVIHRFQIVYDPEDAEARLFLEGIELHVRFRLETFDAEGDAS
Ga0335075_112477522	3300032896	Soil	MKALVSWDDGDGVTHRFQIAYDPDDAEARLFLEAIELHVRFRLETFDAEAEAG
Ga0335072_101268705	3300032898	Soil	VKALVSWEDAEGIKHRWAVAYDPDDPEARHFLEAIELHARFRLETFDAEAPDEATPGR
Ga0335072_101269922	3300032898	Soil	MTGTPLEEAAMKALVSWDDGDGVTHRFQIAYDPDDAEARLFLEAIELHVRFRLETFDAESDAR
Ga0335076_100196325	3300032955	Soil	VKALVSWEDADGTRHRWAIAYDPDDVEARHFLEGLELHARFRLETFDADSGGNMATPERP
Ga0335073_101452494	3300033134	Soil	VKALVSWEDAEGIKHRWAVAYDPDDPEARHFLEAIELHARFRLETFDAEAPDEATPGRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056775

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences