Metagenome Family F056406

Basic Information
Family ID	F056406
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	65 residues
Representative Sequence	RGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Number of Associated Samples	119
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.94 %
% of genes near scaffold ends (potentially truncated)	92.70 %
% of genes from short scaffolds (< 2000 bps)	78.10 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (59.854 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.219 % of family members)
Environment Ontology (ENVO)	Unclassified (29.197 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.905 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.32% β-sheet: 0.00% Coil/Unstructured: 73.68%
Feature Viewer

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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF03098	An_peroxidase	34.31
PF00497	SBP_bac_3	18.98
PF01734	Patatin	3.65
PF06078	DUF937	2.19
PF03401	TctC	1.46
PF00106	adh_short	1.46
PF06127	Mpo1-like	1.46
PF00072	Response_reg	0.73
PF07721	TPR_4	0.73
PF03706	LPG_synthase_TM	0.73
PF01300	Sua5_yciO_yrdC	0.73
PF00668	Condensation	0.73
PF00484	Pro_CA	0.73
PF03734	YkuD	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	3.65
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	3.65
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	3.65
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	2.19
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.46
COG4539	2-hydroxy fatty acid dioxygenase MPO1 (alpha-oxidation of fatty acids)	Lipid transport and metabolism [I]	1.46
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.73
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1020	EntF, seryl-AMP synthase component of non-ribosomal peptide synthetase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.73
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.73

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.85 %
Unclassified	root	N/A	40.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.85 %
Unclassified	root	N/A	40.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.85 %
Unclassified	root	N/A	40.15 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.85 %
Unclassified	root	N/A	40.15 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	59.12 %
Unclassified	root	N/A	40.15 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	52.55 %
Unclassified	root	N/A	40.15 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.65 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	49.64 %
Unclassified	root	N/A	40.15 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.65 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	45.26 %
Unclassified	root	N/A	40.15 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.15 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.46 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.15 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.46 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459019\|G14TP7Y01AOMZW	Not Available	609	Open in IMG/M
2170459019\|G14TP7Y01DIKME	Not Available	614	Open in IMG/M
2170459019\|G14TP7Y01EZTKT	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	707	Open in IMG/M
2228664021\|ICCgaii200_c0793075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	659	Open in IMG/M
2228664021\|ICCgaii200_c0793321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	729	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10105925	Not Available	691	Open in IMG/M
3300001989\|JGI24739J22299_10166882	Not Available	649	Open in IMG/M
3300002070\|JGI24750J21931_1003098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1997	Open in IMG/M
3300002126\|JGI24035J26624_1040534	Not Available	520	Open in IMG/M
3300002128\|JGI24036J26619_10002123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3439	Open in IMG/M
3300002459\|JGI24751J29686_10036597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1017	Open in IMG/M
3300004058\|Ga0055498_10096321	Not Available	593	Open in IMG/M
3300004114\|Ga0062593_101127341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	817	Open in IMG/M
3300004114\|Ga0062593_102451838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	590	Open in IMG/M
3300004157\|Ga0062590_100308757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1237	Open in IMG/M
3300004479\|Ga0062595_100180498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1277	Open in IMG/M
3300005093\|Ga0062594_100508093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1022	Open in IMG/M
3300005164\|Ga0066815_10071899	Not Available	609	Open in IMG/M
3300005164\|Ga0066815_10084413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	577	Open in IMG/M
3300005169\|Ga0066810_10016497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1175	Open in IMG/M
3300005288\|Ga0065714_10361736	Not Available	624	Open in IMG/M
3300005328\|Ga0070676_10104885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1752	Open in IMG/M
3300005329\|Ga0070683_100835953	Not Available	883	Open in IMG/M
3300005329\|Ga0070683_101194539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	731	Open in IMG/M
3300005331\|Ga0070670_100478208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1106	Open in IMG/M
3300005334\|Ga0068869_100943689	Not Available	749	Open in IMG/M
3300005336\|Ga0070680_100083327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2641	Open in IMG/M
3300005337\|Ga0070682_100017182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4215	Open in IMG/M
3300005344\|Ga0070661_100351693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1156	Open in IMG/M
3300005345\|Ga0070692_10029777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2724	Open in IMG/M
3300005345\|Ga0070692_10952699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	597	Open in IMG/M
3300005347\|Ga0070668_100508825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1043	Open in IMG/M
3300005353\|Ga0070669_101199574	Not Available	656	Open in IMG/M
3300005440\|Ga0070705_100470038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	948	Open in IMG/M
3300005456\|Ga0070678_100682234	Not Available	924	Open in IMG/M
3300005539\|Ga0068853_101211634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	729	Open in IMG/M
3300005546\|Ga0070696_100007921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7093	Open in IMG/M
3300005548\|Ga0070665_100908691	Not Available	893	Open in IMG/M
3300005618\|Ga0068864_102039977	Not Available	580	Open in IMG/M
3300005713\|Ga0066905_101109728	Not Available	703	Open in IMG/M
3300005719\|Ga0068861_100066358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2782	Open in IMG/M
3300005844\|Ga0068862_100237914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1654	Open in IMG/M
3300005844\|Ga0068862_101793076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	623	Open in IMG/M
3300006806\|Ga0079220_11552174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	571	Open in IMG/M
3300006844\|Ga0075428_101272213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	774	Open in IMG/M
3300006845\|Ga0075421_101233481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	832	Open in IMG/M
3300006852\|Ga0075433_10141637	Not Available	2137	Open in IMG/M
3300006954\|Ga0079219_10409094	Not Available	904	Open in IMG/M
3300009093\|Ga0105240_10774843	Not Available	1041	Open in IMG/M
3300009094\|Ga0111539_10154783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2683	Open in IMG/M
3300009162\|Ga0075423_12520221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	561	Open in IMG/M
3300009171\|Ga0105101_10390546	Not Available	677	Open in IMG/M
3300009174\|Ga0105241_12581556	Not Available	510	Open in IMG/M
3300009545\|Ga0105237_10011426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9392	Open in IMG/M
3300010047\|Ga0126382_11204891	Not Available	678	Open in IMG/M
3300010358\|Ga0126370_11435352	Not Available	653	Open in IMG/M
3300010371\|Ga0134125_11765139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	673	Open in IMG/M
3300010396\|Ga0134126_10187342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2485	Open in IMG/M
3300010400\|Ga0134122_10420793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1186	Open in IMG/M
3300010400\|Ga0134122_10436750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1167	Open in IMG/M
3300010403\|Ga0134123_10198672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1704	Open in IMG/M
3300011119\|Ga0105246_10117068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1968	Open in IMG/M
3300011269\|Ga0137392_10623487	Not Available	895	Open in IMG/M
3300012492\|Ga0157335_1014343	Not Available	685	Open in IMG/M
3300012494\|Ga0157341_1051131	Not Available	506	Open in IMG/M
3300012883\|Ga0157281_1005021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1284	Open in IMG/M
3300012896\|Ga0157303_10003283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2180	Open in IMG/M
3300012900\|Ga0157292_10442849	Not Available	501	Open in IMG/M
3300012913\|Ga0157298_10020105	Not Available	1252	Open in IMG/M
3300012916\|Ga0157310_10004192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	3217	Open in IMG/M
3300012938\|Ga0162651_100018878	Not Available	929	Open in IMG/M
3300012948\|Ga0126375_10056038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2129	Open in IMG/M
3300012987\|Ga0164307_10707910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	790	Open in IMG/M
3300012987\|Ga0164307_11282517	Not Available	611	Open in IMG/M
3300012989\|Ga0164305_10011479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4291	Open in IMG/M
3300012989\|Ga0164305_10957855	Not Available	724	Open in IMG/M
3300013306\|Ga0163162_12393357	Not Available	607	Open in IMG/M
3300013306\|Ga0163162_13317416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	515	Open in IMG/M
3300014325\|Ga0163163_11675724	Not Available	697	Open in IMG/M
3300014745\|Ga0157377_10112100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1641	Open in IMG/M
3300015201\|Ga0173478_10012713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2222	Open in IMG/M
3300015372\|Ga0132256_100420775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1440	Open in IMG/M
3300015372\|Ga0132256_101082170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	916	Open in IMG/M
3300015373\|Ga0132257_104006765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	536	Open in IMG/M
3300015374\|Ga0132255_100253425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2516	Open in IMG/M
3300015374\|Ga0132255_106180222	Not Available	507	Open in IMG/M
3300017792\|Ga0163161_10334162	Not Available	1201	Open in IMG/M
3300017974\|Ga0187777_11399614	Not Available	516	Open in IMG/M
3300017993\|Ga0187823_10087715	Not Available	913	Open in IMG/M
3300018076\|Ga0184609_10556261	Not Available	518	Open in IMG/M
3300022737\|Ga0247747_1001236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2576	Open in IMG/M
3300022737\|Ga0247747_1004173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1383	Open in IMG/M
3300022889\|Ga0247785_1016217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	801	Open in IMG/M
3300022892\|Ga0247753_1004584	Not Available	1348	Open in IMG/M
3300023064\|Ga0247801_1000348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6091	Open in IMG/M
3300023066\|Ga0247793_1000086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	16613	Open in IMG/M
3300025885\|Ga0207653_10005580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3927	Open in IMG/M
3300025885\|Ga0207653_10079910	Not Available	1130	Open in IMG/M
3300025901\|Ga0207688_10004933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7265	Open in IMG/M
3300025903\|Ga0207680_11099389	Not Available	568	Open in IMG/M
3300025912\|Ga0207707_11260993	Not Available	595	Open in IMG/M
3300025913\|Ga0207695_10720045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	878	Open in IMG/M
3300025914\|Ga0207671_10818721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	738	Open in IMG/M
3300025930\|Ga0207701_10043716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4153	Open in IMG/M
3300025934\|Ga0207686_10164311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1559	Open in IMG/M
3300025942\|Ga0207689_10923126	Not Available	737	Open in IMG/M
3300025944\|Ga0207661_10922806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	804	Open in IMG/M
3300025944\|Ga0207661_12018630	Not Available	523	Open in IMG/M
3300025973\|Ga0210145_1000709	Not Available	2470	Open in IMG/M
3300025986\|Ga0207658_11510169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	614	Open in IMG/M
3300026035\|Ga0207703_10169557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1919	Open in IMG/M
3300026118\|Ga0207675_100095555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2796	Open in IMG/M
3300026733\|Ga0207550_102081	Not Available	622	Open in IMG/M
3300026755\|Ga0207632_101139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	648	Open in IMG/M
3300026793\|Ga0207441_104444	Not Available	594	Open in IMG/M
3300026939\|Ga0207542_103558	Not Available	553	Open in IMG/M
3300027252\|Ga0209973_1053385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	612	Open in IMG/M
3300027421\|Ga0207563_101942	Not Available	698	Open in IMG/M
3300027438\|Ga0207564_102786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	775	Open in IMG/M
3300027455\|Ga0207504_102254	Not Available	658	Open in IMG/M
3300027476\|Ga0207514_102620	Not Available	603	Open in IMG/M
3300027543\|Ga0209999_1125866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	503	Open in IMG/M
3300027876\|Ga0209974_10017602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2370	Open in IMG/M
3300028878\|Ga0307278_10488832	Not Available	538	Open in IMG/M
3300031226\|Ga0307497_10320169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	717	Open in IMG/M
3300031469\|Ga0170819_16307709	Not Available	1055	Open in IMG/M
3300031538\|Ga0310888_10005331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4485	Open in IMG/M
3300031716\|Ga0310813_10069205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2660	Open in IMG/M
3300031716\|Ga0310813_10100520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2247	Open in IMG/M
3300031908\|Ga0310900_10025835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3179	Open in IMG/M
3300031913\|Ga0310891_10257043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	605	Open in IMG/M
3300032000\|Ga0310903_10060233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1493	Open in IMG/M
3300032174\|Ga0307470_10283491	All Organisms → cellular organisms → Bacteria → Proteobacteria	1114	Open in IMG/M
3300032205\|Ga0307472_100425129	Not Available	1120	Open in IMG/M
3300033513\|Ga0316628_102297694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300033758\|Ga0314868_052229	Not Available	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.58%
Host-Associated	Host-Associated	37.23%
Engineered	Engineered	2.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.20%
Plants	Host-Associated → Plants	37.23%
Aquatic	Environmental → Aquatic	4.38%
Solid Waste	Engineered → Solid Waste	2.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.79%
Grass	Engineered → Solid Waste → Grass	2.19%
Freshwater	Environmental → Aquatic → Freshwater	1.46%
Marine	Environmental → Aquatic → Marine	1.46%
Sediment	Environmental → Aquatic → Sediment	1.46%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.73%
Roots	Host-Associated → Plants → Roots	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.06%
Loam	Environmental → Terrestrial → Soil → Loam	10.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.19%
Composting	Engineered → Solid Waste → Grass → Composting	2.19%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.73%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	15.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.19%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.73%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	9.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.19%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.19%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	2.19%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.73%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.73%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025973	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026733	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A1-12 (SPAdes)	Environmental	Open in IMG/M
3300026755	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01K5-12 (SPAdes)	Environmental	Open in IMG/M
3300026793	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A3a-12 (SPAdes)	Environmental	Open in IMG/M
3300026939	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5-12 (SPAdes)	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027421	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A2-10 (SPAdes)	Environmental	Open in IMG/M
3300027438	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3a-11 (SPAdes)	Environmental	Open in IMG/M
3300027455	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G06K3-12 (SPAdes)	Environmental	Open in IMG/M
3300027476	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08.2A5-11 (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033758	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4MG_02676320	2170459019	Switchgrass, Maize And Mischanthus Litter	KEATAPKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
4MG_02998770	2170459019	Switchgrass, Maize And Mischanthus Litter	VTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
4MG_00176240	2170459019	Switchgrass, Maize And Mischanthus Litter	VTEQYTGSIVIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVARPERDQRGGMSSLRMNAIGKAFNRRDE
ICCgaii200_07930751	2228664021	Soil	EDCRQMMLDNRTGRMWDKGXVNCYXAVSRXXRDQRXGMSSLRMNAIGKAFNRRDD
ICCgaii200_07933212	2228664021	Soil	APKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRTERDQRSGMSSLRINAIGKAFNRRDE
AF_2010_repII_A1DRAFT_101059252	3300000597	Forest Soil	PPQRPQTESYSGAIIIVPTRGDYCWQRMLDNRTGQMWDKGYVNCDEAVSRAEKEARSGMSTLRINAIGKAFNRSSDN*
JGI24739J22299_101668822	3300001989	Corn Rhizosphere	PSGWTALRKEATAPKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
JGI24750J21931_10030981	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	SRGEDCRQMMLDNRTGRMWDKGLVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
JGI24035J26624_10405341	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	APKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
JGI24036J26619_100021235	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	KEATAPKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
JGI24751J29686_100365971	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	GWSALRQEATATKPPVSVTEQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0055498_100963212	3300004058	Natural And Restored Wetlands	MLDNRTGRMWDKGVVNCYEAASRPERDQRSSLRMNAIGKAFNRRDE*
Ga0062593_1011273412	3300004114	Soil	EQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPERAQRSGMSSLRMNAIGKAFNRRDE*
Ga0062593_1024518382	3300004114	Soil	RGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPERDQRSGMSSLRINAIGKAFNRRDE*
Ga0062590_1003087571	3300004157	Soil	RGEDCRQMMLDNRTGRMWDKGVVNCYEAVARPERDQRGGMSSLRMNAIGKAFNRRDE*
Ga0062595_1001804981	3300004479	Soil	WTALRQEATAPKPPVSVTEQYTGSIVIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVARPERDQRGGMSSLRMNAIGKAFNRRDE*
Ga0062594_1005080932	3300005093	Soil	IIDNRTGKMWDKGYVNCYEVVTQSEKDQRVGMSSLRMNAIGKAFNHGGDN*
Ga0066815_100718992	3300005164	Soil	GEDCRQMMLDNRTGKMWDKGVVNCYEAVSRSEKDQRGGMSSLRINAIGKAFNNRRDE*
Ga0066815_100844131	3300005164	Soil	PTRGEDCRQMMLDNRTGRMWDNGVVNCYEAVSRPGRDQLGKMSSLRINAIGKAFNRRDE*
Ga0066810_100164971	3300005169	Soil	TEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWEKGIVNCYEAVSRSERDHRSGMSSLRLNAIGKAFNRRDE*
Ga0065714_103617361	3300005288	Miscanthus Rhizosphere	YSNDWHPSGWTALRKEATAPKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0070676_101048851	3300005328	Miscanthus Rhizosphere	RTGKMWDKGYVNCYEAVTQNEKDQRVGMSSLRMNAIGKAFNHGGDN*
Ga0070683_1008359531	3300005329	Corn Rhizosphere	ATAPKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0070683_1011945392	3300005329	Corn Rhizosphere	PTRGEDCRQMMLDNRTGRMWDTGFVNCYEAVSRSEKDQRGGMSSLRINSIGKAFNRRDE*
Ga0070670_1004782082	3300005331	Switchgrass Rhizosphere	ATAPKPPVSVTEQYTGSIVIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVARPERDQRGGMSSLRMNAIGKAFNRRDE*
Ga0068869_1009436891	3300005334	Miscanthus Rhizosphere	QPIIDNRIGKMWDKGYVNCYEAVAPQEKDQRVGMSSARINAIGKAFNHDN*
Ga0070680_1000833271	3300005336	Corn Rhizosphere	PPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPERDQRSGMSSLRINAIGKAFNRRDE*
Ga0070682_1000171825	3300005337	Corn Rhizosphere	DNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0070661_1003516932	3300005344	Corn Rhizosphere	NRTGRMWDTGFVNCYEAVSRSEKDQRGGMSSLRINSIGKAFNRRDE*
Ga0070692_100297773	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	QYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0070692_109526991	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	EQYTGSIIIVPARGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPERAQRSGMSSLRMNAIGKAFNRRDE*
Ga0070668_1005088251	3300005347	Switchgrass Rhizosphere	EQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGLVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0070669_1011995742	3300005353	Switchgrass Rhizosphere	SIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0070705_1004700381	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	EQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPERDQRSGMSSLRINAIGKAFNRRDE*
Ga0070678_1006822341	3300005456	Miscanthus Rhizosphere	RGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0068853_1012116342	3300005539	Corn Rhizosphere	RTGRMWDKGVVNCYEAVARPERDQRGGMSSLRMNAIGKAFNRRDE*
Ga0070696_1000079211	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	KPPVSVTEQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0070665_1009086912	3300005548	Switchgrass Rhizosphere	RQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0068864_1020399771	3300005618	Switchgrass Rhizosphere	SNDWHPSGWTALRKEATAPKPPVSATEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0066905_1011097281	3300005713	Tropical Forest Soil	CWQRMIDNRTGKMWDKGYVNCYEAVAPLEKDQRVGMSSARMNAIGKAFNHIGDN*
Ga0068861_1000663583	3300005719	Switchgrass Rhizosphere	MMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0068862_1002379142	3300005844	Switchgrass Rhizosphere	EDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0068862_1017930762	3300005844	Switchgrass Rhizosphere	GEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPERDQRSGMSSLRINAIGKAFNRRDE*
Ga0075024_1003752573	3300006047	Watersheds	GKMWDKGYVNCYEAITQNEKDQRVGMSSLRMNAIGKAFNHGGDN*
Ga0079220_115521741	3300006806	Agricultural Soil	KPPISAAEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDNGIVNCYQAVSRPEKDQRGGMSSLRINAIGKAFNRRDE*
Ga0075428_1012722132	3300006844	Populus Rhizosphere	GEDCRQMMLDNRTGKMWDIGIVNCYQAVSRSEKDQRGGMSSLRINAIGKAFNRRDE*
Ga0075421_1012334812	3300006845	Populus Rhizosphere	NDWHPSGWTALHKEATTPKPPVSVTEQYTGSLIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRTERDQRSGMSSLRINAIGKAFNRRDE*
Ga0075433_101416371	3300006852	Populus Rhizosphere	NRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0079219_104090943	3300006954	Agricultural Soil	RHEANVKPPPAAKGESYTGSIIFVPTRGDECKEIVLDNRTGKMWDKGPINCNEAVSRSDRDQRGGMSTLRMNAIGKAFNHRDE*
Ga0105240_107748432	3300009093	Corn Rhizosphere	IIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0111539_101547833	3300009094	Populus Rhizosphere	GWTALRKEATAPKPPISVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRSERDQRGGMSSLRMNAIGKAFNRRDD*
Ga0075423_125202211	3300009162	Populus Rhizosphere	NRTGRMWDNGVVNCYEAVSRSEKNQRGGMSSLRINAIGKAFNRRDE*
Ga0105101_103905462	3300009171	Freshwater Sediment	IVPTRGENCWQLMLDNRTGKMWEKGYVNCYEAVSRPDRERSGLSTVRMNAIGKAFNGGAN
Ga0105241_125815561	3300009174	Corn Rhizosphere	RGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0105237_1001142610	3300009545	Corn Rhizosphere	MMLDNRTGRMWDKGLVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0126382_112048912	3300010047	Tropical Forest Soil	MTEQYTGSIIIVPARGEDCRQMMLDNRTGRMWDIGIVNCYQAVSRSEKDQCGGMSSLRINAIGKAFNRRDE*
Ga0126370_114353521	3300010358	Tropical Forest Soil	SNDWHPSGWSALRHEATVQPPQRPQTESYSGAIIIVPTRGDYCWQRMLDNRTGQMWDKGYVNCDEAVSRAEKEARSGMSTLRINAIGKAFNRSSDN*
Ga0134125_117651391	3300010371	Terrestrial Soil	VPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE
Ga0134126_101873423	3300010396	Terrestrial Soil	HPSGWTALRKEATAPKPPVYVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDTGFVNCYEAVSRSEKDQRGGMSSLRINSIGKAFNRRDE*
Ga0134122_104207932	3300010400	Terrestrial Soil	APKPPISVTEQYTGAVIIVPSRGEDCRQMMLDNRTGRMWDKGFVNCYEAVSRPERDQRSGMSSLRMNAIGKAFNRRDE*
Ga0134122_104367502	3300010400	Terrestrial Soil	SRGEDCRQMMLDNRTGRMWDKGVVNCYEAVARPERDQRGGMSSLRMNAIGKAFNRRDE*
Ga0134123_101986721	3300010403	Terrestrial Soil	TKPPVSVTEQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0105246_101170681	3300011119	Miscanthus Rhizosphere	QYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGLVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0137392_106234871	3300011269	Vadose Zone Soil	NRTGKMWDQGYVNCDEAVAPLEKDQRVGMSSLRMNAIGKAFNHAHDE*
Ga0157335_10143432	3300012492	Arabidopsis Rhizosphere	RKEATAPKPPVSVTEQYTGSIIIVPPRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNASGKAFNRRDE*
Ga0157341_10511311	3300012494	Arabidopsis Rhizosphere	HPSGWTALRKEATAPKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0157281_10050212	3300012883	Soil	GEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSERDQRSGMSSLRMNAIGKAFNRRDE*
Ga0157303_100032831	3300012896	Soil	QYTGSIIIVPSRGEDCRQMILDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0157292_104428492	3300012900	Soil	HPSGWSALRQEATATKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0157298_100201052	3300012913	Soil	LDNRTGRMCDKGVVNCYEAVSRAEKEQRGGMSSLRTNAIGKAFNRRDE*
Ga0157310_100041921	3300012916	Soil	APKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGLVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0162651_1000188781	3300012938	Soil	WQRMIDNRTGKMWDKGYVNCYEAVAPLEKDQRVGMSSLRMNAIGKAFNHSNDN*
Ga0126375_100560382	3300012948	Tropical Forest Soil	YTGSLIIVPTRGEDCRQMMLDNRTGRMWDIGIVNCYEAVSRSEKDQRGGMSSLRINAIGKAFNRRDE*
Ga0164307_107079101	3300012987	Soil	RIIDNRTGKMWDKGYVNCYEVVTQSEKDQRVGMSSLRMNAIGKAFNHGGDN*
Ga0164307_112825171	3300012987	Soil	IDNRTGKMWDKGYVNCYEAVAPLEKDQRVGMSALRMNAIGKAFNRGGDN*
Ga0164305_100114796	3300012989	Soil	RQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE*
Ga0164305_109578551	3300012989	Soil	QRMLDNRTGKMWDKGYVNCDEAVSCAEKDARGGMSTARMNAIGKAFNRDN*
Ga0163162_123933571	3300013306	Switchgrass Rhizosphere	TGKMWDKGYVNCYEAVAQSEKDQRVGMSSLRMNAIGKAFNHGGDN*
Ga0163162_133174161	3300013306	Switchgrass Rhizosphere	HPSGWTALRKEATAPKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGLVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0163163_116757241	3300014325	Switchgrass Rhizosphere	VPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0157377_101121001	3300014745	Miscanthus Rhizosphere	GEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE*
Ga0173478_100127131	3300015201	Soil	CRQMMLDNRTGRMWDKGVVNCYEAVSRPERAQRSGMSSLRMNAIGKAFNRRDE*
Ga0132256_1004207751	3300015372	Arabidopsis Rhizosphere	YTGSIVIVPSHGEDCRQMMLDNRTGRMWDKGVVNCYEAVARPERDQRGGMSSLRMNAIGKAFNRRDE*
Ga0132256_1010821701	3300015372	Arabidopsis Rhizosphere	DNRTGKMWDKGYVNCDAAVSRAENEASGGMSTARMNAIRQAFNRDN*
Ga0132257_1040067652	3300015373	Arabidopsis Rhizosphere	RGEECRQMMLDNRTGRMWDIGVVNCYEAVSRSEKDQRGGMSTLRINAIGKAFNRRDE*
Ga0132255_1002534254	3300015374	Arabidopsis Rhizosphere	WQRIIDNRTGKMWDKGYVNCYEAVTQSEKDQRVGMSSLRMNAIGKAFNHGGDN*
Ga0132255_1061802221	3300015374	Arabidopsis Rhizosphere	IDNRTGKMWDKGYVNCYEAVTQNEKDQRVGMSSLRMNAIGKAFNHGGDN*
Ga0163161_103341621	3300017792	Switchgrass Rhizosphere	DWHPSGWSALRQEATATKPPVSVTEQYTGAIIIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0187777_113996142	3300017974	Tropical Peatland	RTGKMWDKGYVNCYEAVAQSEKDQRVGLSSLRMNAIGKAFNHGGDN
Ga0187823_100877151	3300017993	Freshwater Sediment	GWTALRHEAAVKQPPGNKFEPYTGSIIFVPTRGEDCQEIRLDNRTGKMWDKGAVNCTEAVSRSEREQLGGMSSLRMDAIGKAFNHREE
Ga0184609_105562611	3300018076	Groundwater Sediment	MIDNRTGKMWDKGYVNCYEAVSPLEKDQRVGMSSARINAIGKAFHHSSD
Ga0247747_10012363	3300022737	Soil	DNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0247747_10041732	3300022737	Soil	ATKPPVSVTEQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE
Ga0247785_10162171	3300022889	Soil	TKPPVSVTEQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGLVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE
Ga0247753_10045841	3300022892	Soil	APKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0247801_10003485	3300023064	Soil	GSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0247793_10000861	3300023066	Soil	RTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207653_100055804	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	SVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE
Ga0207653_100799102	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	GWTALRKEATAPKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207688_100049337	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	EQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE
Ga0207680_110993891	3300025903	Switchgrass Rhizosphere	PTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207707_112609932	3300025912	Corn Rhizosphere	QRIIDNRTGKMWDKGYVNCYEVVTQSEKDQRVGMSSLRMNAIGKAFNHGGDN
Ga0207695_107200452	3300025913	Corn Rhizosphere	TGAIIIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE
Ga0207671_108187211	3300025914	Corn Rhizosphere	MMLDNRTGRMWDKGLVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE
Ga0207701_100437164	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	SGWTALRQEATAPKPPVSVAEQYTGSIIIVPARGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPERAQRSGMSSLRMNAIGKAFNRRDE
Ga0207686_101643111	3300025934	Miscanthus Rhizosphere	WQRIIDNRTGKMWDKGYVNCYEAIAPQDKDQRVGMSSARINAIGKAFNHDN
Ga0207689_109231261	3300025942	Miscanthus Rhizosphere	LDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207661_109228062	3300025944	Corn Rhizosphere	PKRQISATEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDTGFVNCYEAVSRSEKDQRGGMSSLRINSIGKAFNRRDE
Ga0207661_120186301	3300025944	Corn Rhizosphere	IIDNRTGKMWDKGYVNCYEVVTQSEKDQRVGMSSLRMNAIGKAFNHGGDN
Ga0210145_10007095	3300025973	Natural And Restored Wetlands	MLDNRTGRMWDKGVVNCYEAASRPERDQRSSLRMNAIGKAFNRRDE
Ga0207658_115101691	3300025986	Switchgrass Rhizosphere	SNDWHPSGWTALRQEATAPKPPVSVTEQYTGSIVIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVARPERDQRGGMSSLRMNAIGKAFNRRDE
Ga0207703_101695573	3300026035	Switchgrass Rhizosphere	RQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207675_1000955553	3300026118	Switchgrass Rhizosphere	MMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207550_1020812	3300026733	Soil	SGWSALRQEATATKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207632_1011392	3300026755	Soil	WHPSGWTALRKEATAPKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE
Ga0207441_1044442	3300026793	Soil	QYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207542_1035582	3300026939	Soil	APKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0209973_10533851	3300027252	Arabidopsis Thaliana Rhizosphere	RGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207563_1019422	3300027421	Soil	WHPSGWSALRQEATATKPPVSVTEQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0207564_1027862	3300027438	Soil	QMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE
Ga0207504_1022541	3300027455	Soil	IVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRD
Ga0207514_1026201	3300027476	Soil	NDWHPSGWSALRQEATATKPPVSVTEQYTGSIIIVPSRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPEKGQRGGMSSLRMNAIGKAFNRRDE
Ga0209999_11258662	3300027543	Arabidopsis Thaliana Rhizosphere	ALRKEATTPKPPVSVTEQYTGSIIIVPTRGEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPERDQRSGMSSLRINAIGKAFNRRDE
Ga0209974_100176023	3300027876	Arabidopsis Thaliana Rhizosphere	GEDCRQMMLDNRTGRMWDKGIVNCYEAVSRPERDQRSGMSSLRINAIGKAFNRRDE
Ga0307278_104888321	3300028878	Soil	VRGDYCWQRMIDNRTGKMWDKGYVNCYEAVSPLEKDQRVGMSSARINAIGKAFHHSSD
Ga0307497_103201691	3300031226	Soil	KCWQRIIDNRTGKMWDKGYVNCYEAITQNEKDQRVGMSSLRMNAIGKAFNHGGDN
Ga0170819_163077092	3300031469	Forest Soil	RMLDNRTGKMWDQGYVNCDEAVAPLEKDQRVGMSSLRMNAIGKAFNHAHDE
Ga0310888_100053311	3300031538	Soil	CRQMMLDNRTGRMWDKGVVNCYEAVSRSEKEQRGGMSSLRINAIGKAFNRRDE
Ga0310813_100692053	3300031716	Soil	NDWHPSGWTALRQEATAPKPPVSVTEQYTGSIVIVPSRGEDCRQMMLDNRTGRMWDKGVVNCYEAVARPERDQRGGMSSLRMNAIGKAFNRRDE
Ga0310813_101005201	3300031716	Soil	APKPPVSAAEQYTGSIIIVPTRGEDCRQMMLDNRTGKMWDKGVVNCYEAVSRPERDQRSGMSSLRINAIGKAFNRRDE
Ga0310900_100258351	3300031908	Soil	IVPTRGEDCRQMMLDNRTGRMWDNGVVNCYEAVSRPGRDQLGGMSSLRINAIGKAFNRRD
Ga0310891_102570432	3300031913	Soil	RGEDCRQMMLDNRTGRMWDNGVVNCYEAVSRPGRDQLGGMSSLRINAIGKAFNRRDE
Ga0310903_100602331	3300032000	Soil	NRTGRMWDKGVVNCYEAVSRSERDQRSGMSSLRMNAIGKAFNRRDE
Ga0307470_102834911	3300032174	Hardwood Forest Soil	DNRTGKMWDKGYVNCYEAVTQNEKDQRVGMSSLRMNAIGKAFNHGGDN
Ga0307472_1004251291	3300032205	Hardwood Forest Soil	QRMIDNRTGKMWDKGYVNCYDAVAPLEKDQRVGMSSLRMNAIGKAFNHSSD
Ga0316628_1022976942	3300033513	Soil	IDHHTGSIIIVPPRGDNCRQMMLDNRTGRMWDKGYVNCYEAVSRADKEPGGMSSLRINSIGRAFNRRTD
Ga0314868_052229_301_453	3300033758	Peatland	MIDNRTGKMWDKGYVNCYEAVSPQDKDQRVGMSSLRMNAIGKAFNRGGDN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056406

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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