Metagenome / Metatranscriptome Family F056027

Basic Information
Family ID	F056027
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	40 residues
Representative Sequence	MIKTIILSMCLAASSLSLNARAQDVRQYTDGPVTEVDYIRV
Number of Associated Samples	129
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.62 %
% of genes near scaffold ends (potentially truncated)	97.83 %
% of genes from short scaffolds (< 2000 bps)	95.65 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Bacteria (90.580 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.768 % of family members)
Environment Ontology (ENVO)	Unclassified (20.290 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.899 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.78% β-sheet: 0.00% Coil/Unstructured: 65.22%
Feature Viewer

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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF05163	DinB	14.49
PF12867	DinB_2	6.52
PF00326	Peptidase_S9	5.07
PF03466	LysR_substrate	3.62
PF00126	HTH_1	3.62
PF00155	Aminotran_1_2	2.90
PF14552	Tautomerase_2	2.17
PF02633	Creatininase	2.17
PF01042	Ribonuc_L-PSP	2.17
PF08546	ApbA_C	2.17
PF07978	NIPSNAP	1.45
PF14534	DUF4440	1.45
PF07883	Cupin_2	1.45
PF13924	Lipocalin_5	0.72
PF13240	zinc_ribbon_2	0.72
PF11706	zf-CGNR	0.72
PF00450	Peptidase_S10	0.72
PF13417	GST_N_3	0.72
PF07976	Phe_hydrox_dim	0.72
PF07676	PD40	0.72
PF13614	AAA_31	0.72
PF02129	Peptidase_S15	0.72
PF04367	DUF502	0.72
PF00440	TetR_N	0.72
PF00282	Pyridoxal_deC	0.72
PF02567	PhzC-PhzF	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	14.49
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	2.17
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	2.17
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	2.17
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.72
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.72
COG2928	Uncharacterized membrane protein	Function unknown [S]	0.72
COG2939	Carboxypeptidase C (cathepsin A)	Amino acid transport and metabolism [E]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.58 %
Unclassified	root	N/A	9.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.58 %
Unclassified	root	N/A	9.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.58 %
Unclassified	root	N/A	9.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.84 %
Unclassified	root	N/A	9.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.25 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.35 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.52 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.45 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.72 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.52 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.45 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.72 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.52 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	1.45 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.72 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.52 %
unclassified Azospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum	1.45 %
Sphingomonas kyeonggiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas kyeonggiensis	0.72 %
unclassified Terriglobus	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus	0.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.52 %
Azospirillum sp. B4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	1.45 %
Terriglobus sp. TAA 43	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus → Terriglobus sp. TAA 43	0.72 %
Sphingomonas kyeonggiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas kyeonggiensis	0.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100230739	Not Available	641	Open in IMG/M
3300002245\|JGIcombinedJ26739_100508512	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300004631\|Ga0058899_11847114	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300005332\|Ga0066388_104973328	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005367\|Ga0070667_101510871	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005445\|Ga0070708_102047060	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005459\|Ga0068867_100148123	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300005537\|Ga0070730_10396392	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005537\|Ga0070730_10418139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300005538\|Ga0070731_10493085	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300005538\|Ga0070731_10893268	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005542\|Ga0070732_10915232	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005560\|Ga0066670_10890318	Not Available	541	Open in IMG/M
3300005563\|Ga0068855_100937935	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300005569\|Ga0066705_10709913	Not Available	605	Open in IMG/M
3300005718\|Ga0068866_10273679	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300005836\|Ga0074470_11635029	All Organisms → cellular organisms → Bacteria → Proteobacteria	7375	Open in IMG/M
3300005841\|Ga0068863_100541809	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300005842\|Ga0068858_101238366	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005993\|Ga0080027_10058063	All Organisms → cellular organisms → Bacteria → Proteobacteria	1408	Open in IMG/M
3300006028\|Ga0070717_12144086	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300006046\|Ga0066652_100283599	Not Available	1464	Open in IMG/M
3300006172\|Ga0075018_10240668	Not Available	873	Open in IMG/M
3300006176\|Ga0070765_100697544	All Organisms → cellular organisms → Bacteria → Proteobacteria	959	Open in IMG/M
3300006358\|Ga0068871_100944772	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300006796\|Ga0066665_10757167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300006800\|Ga0066660_11413223	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006854\|Ga0075425_100855359	Not Available	1041	Open in IMG/M
3300006903\|Ga0075426_10937956	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300006903\|Ga0075426_11144544	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300006914\|Ga0075436_101098829	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300009098\|Ga0105245_11202608	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300009137\|Ga0066709_101432063	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300009177\|Ga0105248_11902923	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300010048\|Ga0126373_12175837	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300010320\|Ga0134109_10191279	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300010339\|Ga0074046_10039633	All Organisms → cellular organisms → Bacteria → Proteobacteria	3171	Open in IMG/M
3300010359\|Ga0126376_11513549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300010361\|Ga0126378_12240728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300010366\|Ga0126379_11291255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300010376\|Ga0126381_103283692	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300010396\|Ga0134126_10606718	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300010398\|Ga0126383_11152602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300010401\|Ga0134121_10183541	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300012211\|Ga0137377_11956872	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300012476\|Ga0157344_1004913	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012582\|Ga0137358_10024691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3896	Open in IMG/M
3300012582\|Ga0137358_10252210	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300012683\|Ga0137398_10585797	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300012931\|Ga0153915_13511189	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012964\|Ga0153916_11899423	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012971\|Ga0126369_11189601	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300012971\|Ga0126369_13498601	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300012985\|Ga0164308_10302516	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300013100\|Ga0157373_10961471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas kyeonggiensis	636	Open in IMG/M
3300013297\|Ga0157378_11429801	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300014157\|Ga0134078_10201054	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300014489\|Ga0182018_10677271	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300014501\|Ga0182024_10016768	All Organisms → cellular organisms → Bacteria	13841	Open in IMG/M
3300014657\|Ga0181522_10342471	All Organisms → cellular organisms → Bacteria → Proteobacteria	890	Open in IMG/M
3300014657\|Ga0181522_10680982	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300014838\|Ga0182030_10711331	Not Available	939	Open in IMG/M
3300015197\|Ga0167638_1061551	Not Available	793	Open in IMG/M
3300015356\|Ga0134073_10227432	Not Available	633	Open in IMG/M
3300016294\|Ga0182041_11544758	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300016371\|Ga0182034_10298029	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300017930\|Ga0187825_10304539	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300017961\|Ga0187778_10240093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1161	Open in IMG/M
3300017970\|Ga0187783_10691240	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300017993\|Ga0187823_10080344	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300017994\|Ga0187822_10244177	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300018029\|Ga0187787_10207443	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300018037\|Ga0187883_10178843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300018040\|Ga0187862_10153751	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300018044\|Ga0187890_10717357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300018062\|Ga0187784_11612189	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300018468\|Ga0066662_11046003	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300019890\|Ga0193728_1187475	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300020580\|Ga0210403_10452912	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300021168\|Ga0210406_11120871	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300021171\|Ga0210405_10760017	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300021180\|Ga0210396_10496814	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300021441\|Ga0213871_10129534	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300021479\|Ga0210410_11766499	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300021560\|Ga0126371_10943916	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300022712\|Ga0242653_1029279	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300024049\|Ga0233359_1045666	Not Available	516	Open in IMG/M
3300024290\|Ga0247667_1090786	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300025903\|Ga0207680_11195243	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300025916\|Ga0207663_11216169	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300025938\|Ga0207704_10166396	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300025960\|Ga0207651_10649054	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300026088\|Ga0207641_11118358	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300026142\|Ga0207698_10394048	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300026315\|Ga0209686_1233319	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300026328\|Ga0209802_1227551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → unclassified Terriglobus → Terriglobus sp. TAA 43	676	Open in IMG/M
3300026330\|Ga0209473_1151140	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300026490\|Ga0257153_1087211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300026552\|Ga0209577_10337299	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300027545\|Ga0209008_1098543	Not Available	653	Open in IMG/M
3300027575\|Ga0209525_1081061	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300027745\|Ga0209908_10228553	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300027853\|Ga0209274_10104154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	1402	Open in IMG/M
3300027857\|Ga0209166_10270149	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300027889\|Ga0209380_10214290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1131	Open in IMG/M
3300028047\|Ga0209526_10667597	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300028047\|Ga0209526_10976945	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300028146\|Ga0247682_1091100	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300028379\|Ga0268266_10767482	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300029910\|Ga0311369_10684138	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300030007\|Ga0311338_10507559	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300030058\|Ga0302179_10194266	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300030520\|Ga0311372_10368462	All Organisms → cellular organisms → Bacteria → Proteobacteria	2204	Open in IMG/M
3300030520\|Ga0311372_12607454	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300030580\|Ga0311355_10372467	All Organisms → cellular organisms → Bacteria → Proteobacteria	1407	Open in IMG/M
3300030617\|Ga0311356_11638780	Not Available	578	Open in IMG/M
3300030677\|Ga0302317_10176785	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300031028\|Ga0302180_10313198	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300031028\|Ga0302180_10524014	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031234\|Ga0302325_12905423	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300031525\|Ga0302326_12674747	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300031543\|Ga0318516_10108884	All Organisms → cellular organisms → Bacteria → Proteobacteria	1571	Open in IMG/M
3300031544\|Ga0318534_10472896	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300031545\|Ga0318541_10287612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	915	Open in IMG/M
3300031561\|Ga0318528_10730079	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031708\|Ga0310686_100806498	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300031715\|Ga0307476_10165118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	1596	Open in IMG/M
3300031763\|Ga0318537_10112761	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300031765\|Ga0318554_10442596	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031793\|Ga0318548_10238911	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300031879\|Ga0306919_11431150	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300031910\|Ga0306923_10549524	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300031947\|Ga0310909_10866267	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031954\|Ga0306926_10648971	All Organisms → cellular organisms → Bacteria → Proteobacteria	1284	Open in IMG/M
3300032055\|Ga0318575_10484616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300032174\|Ga0307470_11957045	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300034815\|Ga0373906_173140	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.61%
Host-Associated	Host-Associated	16.67%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.91%
Plants	Host-Associated → Plants	16.67%
Aquatic	Environmental → Aquatic	8.70%
Bioremediation	Engineered → Bioremediation	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.42%
Peat	Environmental → Terrestrial → Peat	8.70%
Freshwater	Environmental → Aquatic → Freshwater	7.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.52%
Sediment	Environmental → Aquatic → Sediment	1.45%
Roots	Host-Associated → Plants → Roots	0.72%
Metal	Engineered → Bioremediation → Metal	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.83%
Loam	Environmental → Terrestrial → Soil → Loam	10.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.45%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.45%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.72%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024049	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-P30	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034815	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B3A4.1	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1002307391	3300000364	Soil	MTKTIILFICVAASSLSLNASAQNARAQDLRQYTEGPVT
JGIcombinedJ26739_1005085124	3300002245	Forest Soil	MIKIIVLSMGLAISAVSLNARAQDVRGYSYGPVTEVDCVHVEYGHF
Ga0058899_118471142	3300004631	Forest Soil	MNKTIILSMCLAASSLSLNARAQDERAYTEGPVTEEDYIQVEYGHF
Ga0066388_1049733282	3300005332	Tropical Forest Soil	MVKAAVLSMCLAVSSLSLNALAQDVRGYSYGPVTEVDYIHV
Ga0070667_1015108711	3300005367	Switchgrass Rhizosphere	MIKTIVLSMCLAASSLSFAHAQNGRAYSYGPVTQVDYIRVE
Ga0070708_1020470601	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTKAIVVSMCLAASSLSLKPRAQDERGYGYGPVTEVDYIHVEYGH
Ga0068867_1001481231	3300005459	Miscanthus Rhizosphere	MKNRGEEKMIKAAIFSVCLAVSSLSLNARAEDVRQYTDGPVTEVDYI
Ga0070730_103963921	3300005537	Surface Soil	MIKTIILSMCLSSLSLNAHAQDVRQYSEGPVTEVNYI
Ga0070730_104181392	3300005537	Surface Soil	MNKTLILSMCLAASLSVNARAQTERAYTYGPVTEVDYIHV
Ga0070731_104930852	3300005538	Surface Soil	MTKTIALSLCLAASVLSLSARAQDERQYTDGPVTEVD
Ga0070731_108932682	3300005538	Surface Soil	MIKTIILSMGLAASSLSLDARAQDARQYIDGPVTLVQEIGV
Ga0070732_109152322	3300005542	Surface Soil	MTKAIVVSMCLAASSLSLKPRAQDERGYGYGPVTEVDYIHVEYG
Ga0066670_108903181	3300005560	Soil	VIKTIVFSMCLAALSLSGNARAQGARAYSYGPVTEVDYI
Ga0068855_1009379353	3300005563	Corn Rhizosphere	MKNRGEEKMIKAAIFSVCLAVSSLSLNARAEDVRQYTDGPVTEVDYIY
Ga0066705_107099132	3300005569	Soil	MIKTIILSMGLAASSFSLNARAQDERQYTEGPVTLVQ
Ga0066708_110426102	3300005576	Soil	MIKTIMLSMCLAASLSLDARAQDVNAGAKDERQYTDGPVTLVQEIA
Ga0068866_102736792	3300005718	Miscanthus Rhizosphere	MIKTIVLSMCLAASSLSFAHAQNGRAYSYGPVTQVDYIRVEYGHF
Ga0074470_116350291	3300005836	Sediment (Intertidal)	MIKTIVVSMCLAGSTLSLNARAADERWYTYGPVTEVDYVAVEYGHF
Ga0068863_1005418091	3300005841	Switchgrass Rhizosphere	MIKAAIFSVCLAVSSLSLNARAEDVRQYTDGPVTEVDYI
Ga0068858_1012383662	3300005842	Switchgrass Rhizosphere	MMRTIVLTMCLAVSSLALNARAEDERHYTEGPVTL
Ga0080027_100580631	3300005993	Prmafrost Soil	MIKTIILSMCLAASSLSLNARAQDEPAYTEGPVTEVDYIQVE
Ga0070717_121440862	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTKTIFLSICLVASSLSLRASAQDERGYSYGPVTEVDYIHV
Ga0066652_1002835991	3300006046	Soil	MIKTIVLSMCLAASSLSLAGAQNGRAYSYGPVTEVDYI
Ga0075018_102406681	3300006172	Watersheds	MTKIIILSMCLAFSALSLNASAQDERKYSEGPVTLVQEIGVE
Ga0070765_1006975441	3300006176	Soil	MTKTTILSMCLAASLLSLDARAQDERQYTEGPVTLVQEIGV
Ga0068871_1009447722	3300006358	Miscanthus Rhizosphere	MIKTIVLSMCLAASSLSFAHAQNGRAYSYGPVTQVDY
Ga0066665_107571671	3300006796	Soil	MIKTIILSMCFAVCSLSLDARAQDVRQYTDGPITE
Ga0066660_114132231	3300006800	Soil	MIKTIMLSMGLAASSFSLNAGAQDERQYTEGPVTFVQEIA
Ga0075425_1008553593	3300006854	Populus Rhizosphere	MIKTIALSLCLASSLSLSTRAQDERGYSYGPVTEVDYIHVEYGHFG
Ga0075426_109379562	3300006903	Populus Rhizosphere	MTKTIILSVCLAAAALSLGAPAQDVRQYTEGPVTL
Ga0075426_111445441	3300006903	Populus Rhizosphere	MIKTIIVSMCLAVFTLSPNARAEDERHYTEGPVTLVQEIAVEY
Ga0075436_1010988291	3300006914	Populus Rhizosphere	MTKTIILSVCLAVSPLSLNARADDTRHYTEGPVTLVQEIAV
Ga0105245_112026082	3300009098	Miscanthus Rhizosphere	MIKTIILSMCLAAYSLSPNALAQDERHYTDGPVTEVDYIQVEYG
Ga0066709_1014320633	3300009137	Grasslands Soil	MNKAAIFSMCLAISALSLNARAQDVRGYSYGPVTEVDY
Ga0105248_119029231	3300009177	Switchgrass Rhizosphere	MIKALTLSMCLAASSLSLNAGAQHVRRYSDGPVTNVTYI
Ga0126373_121758372	3300010048	Tropical Forest Soil	MIKTIILSMCLAVSSLSPNARAQDERQYTEGPVTFVQEIAV
Ga0134109_101912791	3300010320	Grasslands Soil	MIKTIVLSMCLAFSALSLNSDAQDQRGYTDGPVTEVD
Ga0074046_100396334	3300010339	Bog Forest Soil	MTKPIILSMCLAASSLSLNARAQNERQYTDGPVTD
Ga0126376_115135491	3300010359	Tropical Forest Soil	MIKTVISSVCLAASLLPLNVRAQDVRQYTDGPVTEVSYIQVQYGHF
Ga0126378_122407282	3300010361	Tropical Forest Soil	MTKTIILSICLAAAALSLEPRAEDERQYTEGPVTFVQEIA
Ga0126379_112912553	3300010366	Tropical Forest Soil	MIKTIILSMCLAASSLSLNAHAQDVRQYSEGPVTEVD
Ga0126381_1032836922	3300010376	Tropical Forest Soil	MIKAITVSICLAASSLSLNAAAQDVRQYSDGPVTNVTYIHV
Ga0134126_106067183	3300010396	Terrestrial Soil	MCLAISALSHIAYAQGERGYGYGPVTEVDYIHVEYGHFDE
Ga0126383_111526021	3300010398	Tropical Forest Soil	MIKTIILSMCLAVSSLFLNARAQDVRQYTDGPVTEVAY
Ga0134121_101835411	3300010401	Terrestrial Soil	MIKALTLSMCLAASSLSLNAGAQDVRRYSDGPVTNVTYIHVDY
Ga0137377_119568721	3300012211	Vadose Zone Soil	MTKAIILSICLAASSLSLNVHAQDVRQYTEGPVTEVDYIHVE
Ga0157344_10049131	3300012476	Arabidopsis Rhizosphere	MIKTIILSMCLAASTLSLDARAQDTLTRDALAQNDRQYTDGPVT
Ga0137358_100246917	3300012582	Vadose Zone Soil	MIKTIILSMCLAASSLSLNARAQDTLSRDAVAQNDRQYTDGPVTEV
Ga0137358_102522101	3300012582	Vadose Zone Soil	MIKTIILSMGLAASSFSLNARAQDERQYTDGPVTLVSYIG
Ga0137398_105857972	3300012683	Vadose Zone Soil	MIKTITLSMCLAAASLSLSARAEDQRQYTEGPVTFVQE
Ga0153915_135111891	3300012931	Freshwater Wetlands	MIRATALSMCLAASSLSLNAGAQDVRQYSDGPVTYV
Ga0153916_118994232	3300012964	Freshwater Wetlands	MTKAIVVSMCLAASSLSLQPRAQDERGYGYGPVTEVDYIHVEYGHLVNT*
Ga0126369_111896012	3300012971	Tropical Forest Soil	MTKIIILSMCLAASSLSLAARAQDVRHYSEGPVTEVDYIQVEYGHF
Ga0126369_134986011	3300012971	Tropical Forest Soil	MLKTIILSMCLAVASSLNARAQDVRQYTDGPVTEVVYIQV
Ga0164308_103025162	3300012985	Soil	MIKALTLSMCLAASSLSLNAGAQDVRQYSDGPVTNVTY
Ga0157373_109614711	3300013100	Corn Rhizosphere	MALAASSISLNARAQDTRAYSYGPVTEVDYIHVEYGHF
Ga0157378_114298011	3300013297	Miscanthus Rhizosphere	MIKTIILSMCLAACSLSLNAHAQDVRQYSEGPVTE
Ga0134078_102010542	3300014157	Grasslands Soil	MIKTIVLSMCLAISALALNARAQQQDKGKSTYSNGPVTLVSYI
Ga0182018_106772712	3300014489	Palsa	MIKTITLSMCLAASSLSLNARAQDERQYTDGPVTEVD
Ga0182024_1001676811	3300014501	Permafrost	MMKMIMINAIILSMCLAAYSLALNARAQDDRQYTDGPVT*
Ga0181522_103424711	3300014657	Bog	MPKTIVLSMCLAASALSLNARAQDERAYTEGPVTEVNYIRVEYGHF
Ga0181522_106809822	3300014657	Bog	MIKTIILSMSLIGSSLLLNASAEDERRYTDGPVTEVNYIRVEYGHF
Ga0182030_107113311	3300014838	Bog	MIKTITLSVCLAASVLSLNARAQDERQYTDGPVTEVAYIHVEYGH
Ga0167638_10615513	3300015197	Glacier Forefield Soil	MIKTIILSMCLAASSLSLNARAQDERAYTEGPVTEV
Ga0134073_102274321	3300015356	Grasslands Soil	MGLAASSFSLNARAQDERQYTEGPVTLVQEIAIEY
Ga0182041_115447581	3300016294	Soil	MIKTIVLSMCLAASLLSLNAHAQDVRQYSEGPVTEVSYIQVE
Ga0182034_102980291	3300016371	Soil	MIKAITLLMCLAAASLSLNAGAQDVRQYSDGPVTR
Ga0187825_103045391	3300017930	Freshwater Sediment	MMQITKTIILSICLAASSLSLNARAQDERQYTEGPVTEEDYIQV
Ga0187778_102400933	3300017961	Tropical Peatland	MIKTIILSVCLAASSLSLTARAQDVRQYTDGPVTEVAYI
Ga0187783_106912402	3300017970	Tropical Peatland	MIKAIILSTCFAASSLSLNARAQDVRQYSEGPVTEVDYIQ
Ga0187823_100803442	3300017993	Freshwater Sediment	MTKTIILSMCLAASSLSLAAPAQDVRHYSEGPVTEVDY
Ga0187822_102441771	3300017994	Freshwater Sediment	MIKTIFFSACLAACSLSLHASAQGERGYRYGPVTEVDYIHVE
Ga0187787_102074431	3300018029	Tropical Peatland	MMKITKTIILSICLAVSSLSLNARAQDVRQYSDGPVTELA
Ga0187883_101788433	3300018037	Peatland	MTKTIILSMCLAASSLSFSARAQDVNAGTKDERQYTDGPVTEVDYIG
Ga0187862_101537511	3300018040	Peatland	MIKTIILSMCLAASSLSLDARAQDERQYTEGPVTL
Ga0187890_107173572	3300018044	Peatland	MIKTLILSMCLAASSLSLNARAQDERQYSEGPVTEVDEVH
Ga0187784_116121892	3300018062	Tropical Peatland	MIKTIILSMCLAVSTLSLDARAQDVRQYTDGPVTE
Ga0066662_110460031	3300018468	Grasslands Soil	MIKAAIFSMCLAISALSLNARAQDVRGYSYGPVTEVDYIH
Ga0193728_11874751	3300019890	Soil	MIKTIILSMCLAASSLSLNARAQDERQYTDGPVTEVDYLH
Ga0210403_104529122	3300020580	Soil	MPKTIILSICLAAAALSLGARAQDERQYTEGPVTFVQEIAVEY
Ga0210406_111208711	3300021168	Soil	MCLAASSLSLNARAQDERAYTEGPVTDVNYLRVEYG
Ga0210405_107600171	3300021171	Soil	MIKAAIFSMCLAISALSLNARAQDVRGYSYGPVTE
Ga0210396_104968141	3300021180	Soil	MIKTIILSVCLAASSLSINARAQQDDERQYTDGPVT
Ga0213871_101295341	3300021441	Rhizosphere	MIKTIILSMCLAASSLSLNARAQDVRQYTDGPVTEVDYIRV
Ga0210410_117664992	3300021479	Soil	MKITKTIILSICLAVSSLSLNARAQDVRQYSDGPVTEL
Ga0126371_109439163	3300021560	Tropical Forest Soil	MVKAIVLSMCLAISALPLNARAQDVRQYTDGPVTEVDYIQVEYGHFE
Ga0242653_10292791	3300022712	Soil	MIKTAIFSMCLAISALSLNARAQEVRGYSYGPVTEVDYVHVEY
Ga0233359_10456662	3300024049	Soil	MTKTITLYMCLAASSLSLDARAQDERKYTEGPVTLV
Ga0247667_10907862	3300024290	Soil	VTKTIILSICLAAAALSLGAHAEDERQYTEGSVTF
Ga0207680_111952432	3300025903	Switchgrass Rhizosphere	MKNRGEEKMIKAAIFSVCLAVSSLSLNARAEDVRQYTDGPVTEVD
Ga0207663_112161692	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MIKTIILSICLVASSLSLNARAEDERGYSQGPVTQV
Ga0207704_101663963	3300025938	Miscanthus Rhizosphere	MTKAAIFSMCLAVSALSLNARAQDARRYNYGPVTLVNYIH
Ga0207651_106490543	3300025960	Switchgrass Rhizosphere	MIKAAIFSVCLAVSSLSLNARAEDVRQYTDGPVTEVDYIYVEYGH
Ga0207641_111183581	3300026088	Switchgrass Rhizosphere	MIKAAIFSVCLAVSSLSLNARAEDVRQYTDGPVTEVDYIHVEYGH
Ga0207698_103940481	3300026142	Corn Rhizosphere	MKNRGEEKMIKAAIFSVCLAVSSLSLNARAEDVRQYTDGPVTEVDYIYV
Ga0209686_12333191	3300026315	Soil	MIKTIILSMGLAASSFSLNARAQDERQYTEGPVTLVQYIGVEY
Ga0209802_12275511	3300026328	Soil	MIKAAIFSMCLAISALSLNARAQDVRGYSYGPVTEVDY
Ga0209473_11511403	3300026330	Soil	MIKAAIFSMCLAISALSLNASAQDVRGYSYGPVTEV
Ga0257153_10872111	3300026490	Soil	MIKTIILSMCLAASSLSLNARAQQQDKDERAYTEGPVTLV
Ga0209577_103372992	3300026552	Soil	MIKTIILSMGLAASSFSLNARAQDERQYTEGPVTFVQEIAVE
Ga0209008_10985432	3300027545	Forest Soil	MIKTIILSMCLAASSLSLNARAEDERHYTDGPVTEVDY
Ga0209525_10810612	3300027575	Forest Soil	MTKTIILSMCLAASSLSLNARAQDERRYTEGPVTLVTYIRIEYG
Ga0209908_102285533	3300027745	Thawing Permafrost	MMKMIKTIILSMCLAASSLSLSARAQDERAYTDGP
Ga0209274_101041543	3300027853	Soil	MIKTIIILSMCLAASSLSLNARAQDERQYADGPVTEVDYIHVEYGHF
Ga0209166_102701491	3300027857	Surface Soil	MNKTLILSMCLAASLSVNARAQTERAYTYGPVTEVDYIH
Ga0209380_102142903	3300027889	Soil	MIKTVILFMCFAASSLSLNARAQDERAYTDGPVTEVDYIRVEYG
Ga0209526_106675972	3300028047	Forest Soil	MIKTIILSMCLAASSLSLNARAQDERAYTDGPVTEVDYIRVEY
Ga0209526_109769451	3300028047	Forest Soil	MIKTIILSMCLTVSSLSLNAPAANERGYTYGPVTQVDYIHVEY
Ga0247682_10911001	3300028146	Soil	MIKTIILSMCLAASSLSLNARAQDERQYTDGPVTEIDYIH
Ga0268266_107674821	3300028379	Switchgrass Rhizosphere	MIKALTLSMCLAASSLSLNAGAQDVRRYSDGPVTNVTYIHV
Ga0311369_106841382	3300029910	Palsa	MCFAASLLSLNARAQDARQYTDGPVTEVAYIHVEYG
Ga0311338_105075591	3300030007	Palsa	MNKATILSMCLAAFSVSRNARAQDERAYTEGPVTEEDYIRVE
Ga0302179_101942661	3300030058	Palsa	MIKTIILSMCLAAASLSLNARAQDERQYTDGPVTEADY
Ga0311372_103684622	3300030520	Palsa	MCLAASSLSLNARAQDERQYTDGPVTTVTYIKVEY
Ga0311372_126074542	3300030520	Palsa	MIKTIILSTCLAASSLSLNARAQDERQYTDGPVTEVDYIQVEY
Ga0311355_103724671	3300030580	Palsa	MIKTVILSVCFAASSLSLNARAQDERAYTEGPVTEVDNIQV
Ga0311356_116387801	3300030617	Palsa	MIKAIILPMCLAASSLSIDARAQDERAYTEGPVTEVTYNHV
Ga0302317_101767852	3300030677	Palsa	MNKAIILAMCLAASSLSLNARAQDERAYTEGPVTEVNYIR
Ga0302180_103131981	3300031028	Palsa	MNKAIILSMCLAASSVSLNARAQDERAYTEGPVTEEDYIHVE
Ga0302180_105240142	3300031028	Palsa	MIKTVILSVCFAASSLSLNARAQDERAYTEGPVTEVDNIQVEY
Ga0302325_129054231	3300031234	Palsa	MTKTIILSMCLAASSLSLDARAQDERHYTDGPVTEVAYI
Ga0302326_126747471	3300031525	Palsa	MIKTIILSMCLAASSLSLDARAQDERQYTEGPVTLVQEI
Ga0318516_101088841	3300031543	Soil	MTKTLILSLSLAASSLAFSARAQDVRQYTDGPVTEMDYIRVEYGH
Ga0318534_104728962	3300031544	Soil	MTKTIILSMCLAASSLSLTARAQDVRHYSEGAVTEVDYIQV
Ga0318541_102876122	3300031545	Soil	MTKTLVLSLSLAASSLAFSARAQDVRQYTDGPVTEMDYIRVEYG
Ga0318528_107300792	3300031561	Soil	MTKTLVLSLSLAASSLAFSARAQDVRQYTDGPVTEMDYIRVEYGH
Ga0310686_1008064983	3300031708	Soil	MIKTIVLSMCLAASSLSLNAGAQDERQYTDGPVTEVDY
Ga0307476_101651181	3300031715	Hardwood Forest Soil	MIKTIILSMCLAASSLALNARAQDARQYADGPVTEAN
Ga0318537_101127611	3300031763	Soil	MIKAVALSMCLAASSLSLTAGAQDVRQYSDGPVTLVTYVHVDY
Ga0318554_104425961	3300031765	Soil	MTKTLILSLSLAASSLAFSARAQDVRQYTDGPVTEMDYIR
Ga0318548_102389111	3300031793	Soil	MIKTIILSMCLAVSSLSLNARAQDERQYTEGPVTFVQEIA
Ga0306919_114311501	3300031879	Soil	MIKTIILSMCLAVSTLSLDARAQDVRQYTDGPVTELDYIQ
Ga0306923_105495243	3300031910	Soil	MIKAVALSMCLAASSLSLTAGAQDVRQYSDGPVTLVTYVHVDYGS
Ga0310909_108662672	3300031947	Soil	MIKTIVLMCLAISALSLNARAQDVRQYTDGPVTELDY
Ga0306926_106489711	3300031954	Soil	MTKTLVLSLSLAASALAFSARAQDVRQYADGPVTEMDYIR
Ga0318575_104846161	3300032055	Soil	MTKTLILSLSLAASSLAFSARAQDVRQYTDGPVTEMDYIRVEYGR
Ga0307470_119570452	3300032174	Hardwood Forest Soil	MIKALTLSMCLAASSLSLNSDAQDVRRYSDGPVTNVTYI
Ga0373906_173140_410_520	3300034815	Sediment Slurry	MTKAIVVSMCLAASSLSLTPRAQDERGYDYGPVTEVD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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