Metagenome / Metatranscriptome Family F055828

Basic Information
Family ID	F055828
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	103 residues
Representative Sequence	MLTRDKLTPVQWQAVRNTPHHVIIAVSASGGSAFDEMLERSAGLQAIVDAINSTHPLVSEIGGSTHIMHAQDDVRKWFYTLDEGHRTPDRLQEKALE
Number of Associated Samples	97
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.03 %
% of genes near scaffold ends (potentially truncated)	96.38 %
% of genes from short scaffolds (< 2000 bps)	93.48 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (76.087 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (18.116 % of family members)
Environment Ontology (ENVO)	Unclassified (35.507 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (34.058 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.80% β-sheet: 0.00% Coil/Unstructured: 47.20%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00724	Oxidored_FMN	24.64
PF05649	Peptidase_M13_N	2.90
PF11737	DUF3300	2.90
PF02897	Peptidase_S9_N	2.17
PF00756	Esterase	0.72
PF02874	ATP-synt_ab_N	0.72
PF13246	Cation_ATPase	0.72
PF03176	MMPL	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	24.64
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	24.64
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	2.90
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	2.17
COG1770	Protease II	Amino acid transport and metabolism [E]	2.17
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.72
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.09 %
Unclassified	root	N/A	23.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.09 %
Unclassified	root	N/A	23.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.09 %
Unclassified	root	N/A	23.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.91 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	2.17 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	2.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.91 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	2.17 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	2.90 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.91 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	2.17 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	2.90 %
Rhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax	0.72 %
Povalibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.91 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	2.17 %
Rhodoferax ferrireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax ferrireducens	0.72 %
Marinobacter santoriniensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter santoriniensis	0.72 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_106156066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	579	Open in IMG/M
3300001213\|JGIcombinedJ13530_108096926	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300001213\|JGIcombinedJ13530_109211286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	660	Open in IMG/M
3300003858\|Ga0031656_10344878	Not Available	502	Open in IMG/M
3300003910\|JGI26437J51864_10157484	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300004114\|Ga0062593_101789261	Not Available	675	Open in IMG/M
3300004157\|Ga0062590_100577693	Not Available	981	Open in IMG/M
3300004157\|Ga0062590_102191044	Not Available	578	Open in IMG/M
3300004242\|Ga0066601_10454082	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300004282\|Ga0066599_100328194	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300004282\|Ga0066599_100799417	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300004643\|Ga0062591_100943098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	814	Open in IMG/M
3300004779\|Ga0062380_10052604	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300005093\|Ga0062594_101394836	Not Available	711	Open in IMG/M
3300005293\|Ga0065715_10071342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter santoriniensis	608	Open in IMG/M
3300005294\|Ga0065705_10555985	Not Available	736	Open in IMG/M
3300005295\|Ga0065707_10589402	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300005353\|Ga0070669_100263545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	1376	Open in IMG/M
3300005354\|Ga0070675_101654168	Not Available	591	Open in IMG/M
3300005356\|Ga0070674_100140964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	1809	Open in IMG/M
3300005364\|Ga0070673_100742076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	904	Open in IMG/M
3300005364\|Ga0070673_102374998	Not Available	504	Open in IMG/M
3300005367\|Ga0070667_101867293	Not Available	566	Open in IMG/M
3300005456\|Ga0070678_100888781	Not Available	814	Open in IMG/M
3300005457\|Ga0070662_101148204	Not Available	667	Open in IMG/M
3300005617\|Ga0068859_100739616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	1073	Open in IMG/M
3300005618\|Ga0068864_101355205	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005719\|Ga0068861_102621558	Not Available	508	Open in IMG/M
3300005831\|Ga0074471_10815113	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300006224\|Ga0079037_100235384	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300006641\|Ga0075471_10474667	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300006881\|Ga0068865_101652547	Not Available	577	Open in IMG/M
3300006953\|Ga0074063_11168336	Not Available	527	Open in IMG/M
3300009075\|Ga0105090_10242759	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300009075\|Ga0105090_10562747	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300009075\|Ga0105090_10838923	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300009081\|Ga0105098_10050818	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300009081\|Ga0105098_10070738	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300009085\|Ga0105103_10614156	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300009091\|Ga0102851_10211321	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300009091\|Ga0102851_10573868	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300009091\|Ga0102851_11469777	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300009094\|Ga0111539_12713941	Not Available	574	Open in IMG/M
3300009094\|Ga0111539_13213262	Not Available	527	Open in IMG/M
3300009111\|Ga0115026_11167991	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300009111\|Ga0115026_11619223	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300009156\|Ga0111538_11007168	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300009167\|Ga0113563_10266547	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300009167\|Ga0113563_12987726	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300009169\|Ga0105097_10075492	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300009170\|Ga0105096_10049741	All Organisms → cellular organisms → Bacteria → Proteobacteria	2068	Open in IMG/M
3300009170\|Ga0105096_10670073	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300009179\|Ga0115028_10601268	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300009179\|Ga0115028_11331769	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300009179\|Ga0115028_11936432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	518	Open in IMG/M
3300009789\|Ga0126307_11302726	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009868\|Ga0130016_10360578	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300012961\|Ga0164302_11133637	Not Available	620	Open in IMG/M
3300013297\|Ga0157378_11698988	Not Available	678	Open in IMG/M
3300013308\|Ga0157375_13120367	Not Available	553	Open in IMG/M
3300014316\|Ga0075339_1094329	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300014881\|Ga0180094_1170366	Not Available	510	Open in IMG/M
3300018073\|Ga0184624_10309155	Not Available	708	Open in IMG/M
3300018083\|Ga0184628_10082151	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300018476\|Ga0190274_12206194	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300022214\|Ga0224505_10031896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2275	Open in IMG/M
3300022309\|Ga0224510_10004065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax ferrireducens	8113	Open in IMG/M
3300024056\|Ga0124853_1028042	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300024056\|Ga0124853_1445745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2449	Open in IMG/M
3300025106\|Ga0209398_1044448	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300025908\|Ga0207643_10871127	Not Available	584	Open in IMG/M
3300025933\|Ga0207706_11421150	Not Available	569	Open in IMG/M
3300025960\|Ga0207651_11491739	Not Available	609	Open in IMG/M
3300026121\|Ga0207683_10900443	Not Available	821	Open in IMG/M
3300026121\|Ga0207683_11558054	Not Available	610	Open in IMG/M
3300026372\|Ga0256804_1005197	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300026486\|Ga0256820_1051360	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300026492\|Ga0256802_1049231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	588	Open in IMG/M
3300027683\|Ga0209392_1023142	All Organisms → cellular organisms → Bacteria → Proteobacteria	1991	Open in IMG/M
3300027683\|Ga0209392_1159617	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300027840\|Ga0209683_10571184	Not Available	515	Open in IMG/M
3300027897\|Ga0209254_10002629	All Organisms → cellular organisms → Bacteria → Proteobacteria	16358	Open in IMG/M
3300027897\|Ga0209254_10160288	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300027897\|Ga0209254_10580230	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300027897\|Ga0209254_10733043	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300027897\|Ga0209254_10874292	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300027956\|Ga0209820_1041583	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300027975\|Ga0209391_10011531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4631	Open in IMG/M
3300027975\|Ga0209391_10126533	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300027975\|Ga0209391_10311649	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300027975\|Ga0209391_10369999	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031538\|Ga0310888_10691801	Not Available	625	Open in IMG/M
3300031873\|Ga0315297_10730719	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300031944\|Ga0310884_10785720	Not Available	581	Open in IMG/M
3300031997\|Ga0315278_10411452	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300032012\|Ga0310902_11304480	Not Available	514	Open in IMG/M
3300032013\|Ga0310906_10643543	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300032013\|Ga0310906_11064101	Not Available	584	Open in IMG/M
3300032126\|Ga0307415_101910294	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300032156\|Ga0315295_11650440	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300032164\|Ga0315283_11390250	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300032177\|Ga0315276_10667528	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300032180\|Ga0307471_103369780	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300032397\|Ga0315287_10023104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6596	Open in IMG/M
3300032397\|Ga0315287_12730650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	524	Open in IMG/M
3300032516\|Ga0315273_12189656	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300033406\|Ga0316604_10070642	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300033406\|Ga0316604_10443365	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300033408\|Ga0316605_11541166	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300033413\|Ga0316603_11401410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	662	Open in IMG/M
3300033414\|Ga0316619_10068115	All Organisms → cellular organisms → Bacteria → Proteobacteria	2119	Open in IMG/M
3300033414\|Ga0316619_10617587	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300033416\|Ga0316622_100155871	All Organisms → cellular organisms → Bacteria	2385	Open in IMG/M
3300033416\|Ga0316622_101371509	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300033418\|Ga0316625_101153893	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300033434\|Ga0316613_10157469	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300033434\|Ga0316613_10605610	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300033434\|Ga0316613_10695763	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300033434\|Ga0316613_11138324	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300033481\|Ga0316600_10493138	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300033481\|Ga0316600_10588388	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300033481\|Ga0316600_10945758	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300033481\|Ga0316600_11108684	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300033482\|Ga0316627_100398563	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300033482\|Ga0316627_102533572	Not Available	541	Open in IMG/M
3300033483\|Ga0316629_10096275	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300033483\|Ga0316629_11362721	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300033483\|Ga0316629_11612525	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300033485\|Ga0316626_10737320	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300033488\|Ga0316621_10874441	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300033521\|Ga0316616_100606255	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300034149\|Ga0364929_0305412	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300034194\|Ga0370499_0178760	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300034196\|Ga0370503_0215207	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300034354\|Ga0364943_0067401	All Organisms → cellular organisms → Bacteria → Proteobacteria	1208	Open in IMG/M
3300034420\|Ga0373918_0068774	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300034420\|Ga0373918_0175561	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300034692\|Ga0373917_0099010	Not Available	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.71%
Host-Associated	Host-Associated	17.39%
Engineered	Engineered	2.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	45.65%
Terrestrial	Environmental → Terrestrial	34.06%
Plants	Host-Associated → Plants	17.39%
Bioremediation	Engineered → Bioremediation	2.17%
Wastewater	Engineered → Wastewater	0.72%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	38.41%
Soil	Environmental → Terrestrial → Soil	32.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.52%
Marine	Environmental → Aquatic → Marine	4.35%
Sediment	Environmental → Aquatic → Sediment	2.90%
Metal	Engineered → Bioremediation → Metal	2.17%
Floodplain	Environmental → Terrestrial → Floodplain	1.45%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.72%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	15.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.52%
Lake	Environmental → Aquatic → Freshwater → Lake	5.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.90%
Pond	Environmental → Aquatic → Freshwater → Pond	2.17%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.17%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.17%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	2.17%
Sediment	Environmental → Aquatic → Marine → Sediment	1.45%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Coastal	Environmental → Aquatic → Marine → Coastal	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	20.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	15.22%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	5.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.17%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.17%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.17%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	18.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	11.59%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	5.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	5.07%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.62%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	2.17%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.17%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.17%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	2.17%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.45%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.45%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.72%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.72%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004242	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014316	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025106	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026372	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 F5	Environmental	Open in IMG/M
3300026486	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR6	Environmental	Open in IMG/M
3300026492	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 CS5	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034194	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17	Environmental	Open in IMG/M
3300034196	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_18	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034420	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.1	Engineered	Open in IMG/M
3300034692	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3	Engineered	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1061560661	3300001213	Wetland	MLTRDKLTPVQWQAVRNTPHHVIIAVSASGGSAFDEMLERSAGLQAIVDAINSTHPLVSEIGGSTHIMHAQDDVRKWFYTLDEGHRTPDRLQEKALE
JGIcombinedJ13530_1080969261	3300001213	Wetland	MLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSELAGSTHIMHAQNDVRKWFYTLDESHRT
JGIcombinedJ13530_1092112861	3300001213	Wetland	MLTRDKLTAVQWQAVRNAPHHVIIAVSSAGGSPFDEMLERAAGLQAIVDAINATHPLVSEIAGSHHIMTAQDEVRRWYYTLDEQH
Ga0031656_103448781	3300003858	Freshwater Lake Sediment	MLTRDKLTVVQWQAVRNTPHHVIIAVSSAGGSAFDEMLERSAGLQGIVDALNSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDESHRTPDRLQEKALETAKHALEALGTHGNADDLMHYGEFLMSLAT
JGI26437J51864_101574842	3300003910	Freshwater Lake Sediment	MLTRERLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGHRTPDKLQEK
Ga0062593_1017892611	3300004114	Soil	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVREIAGAAHIMEAQDDVRAWYYTLADAQRTSPVLQEKAVETLQQALDALSTQGGADDVLHYGEFI
Ga0062590_1005776931	3300004157	Soil	MLTRNQLTNVQWQAVRNTPHHVIIAVSAAGGSPFDEMLERAAGLQGIVDAVNSSHPLVSEIAQSAQIMNAQDDVRKWFYTLD
Ga0062590_1021910441	3300004157	Soil	MLTRDKLTIVQWQAVRNTPHHVIIAVSASGGSAFDEMLERAAGLQGIVDVGNSTHPLLSEIAGSAHIMHAQDDVRRWFYTLDEDHRTPDNLQEKALETARHALEALGTHGSADDLMHYGEFVL
Ga0066601_104540822	3300004242	Freshwater	MLTKDKLTVVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQAVVDATNSTHPLVSEIGGSSHIMHAQDDVRKWFYTLDEAHRTPDRLQEK
Ga0066599_1003281941	3300004282	Freshwater	MLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGVVDALNSTHPLLSEIAGSTHIMHAQDDVRKWFYTL
Ga0066599_1007994171	3300004282	Freshwater	MLTRDKLTVVQWRAVRNTPHHVIVAVSATGGSPFDEMLERSAGLQAIVDAMHSTHPLVRDIADSVHIMRAQDEIRSWYYTLEEVHRTPTNLQ
Ga0062591_1009430981	3300004643	Soil	MLTRNQLTNVQWQAVRNTPHHVIIAVSAAGGSPFDEMLERAAGLQGIVDAVNSSHPLVSEIAQSAQIMNAQD
Ga0062380_100526041	3300004779	Wetland Sediment	MLTRDKLNADQWRAVRNTPHHVIIAVSASGGSPFDEMLERSAGLQRIVDAMNSSHPLLQDIAVSTHIMTAQTEIRSWYYTLADEHRKPDRLQEKALESMQHALDALKQHGGPDDLLHYGDFVMSVAMKVAR
Ga0062594_1013948361	3300005093	Soil	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVREIAGAAHIMEAQDDVRAWYYTLADAQRTSPVLQEKAFETLQQALDALSTQGGADDVLHYGEFIMATA
Ga0065715_100713421	3300005293	Miscanthus Rhizosphere	MLTRDKLTAVQWRAXRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVREIAGAAHIMEAQDDVRAWYYTLADAQRTSPVLQEKAVETL
Ga0065705_105559852	3300005294	Switchgrass Rhizosphere	MLTRDKLTVVQWHALRNTPHHIVIAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAASAHIMAAQDDVRAWYYTLEEAQRTAAVLQEKAVETLQQALDVLSTQGGVDDVLPYGEYVMATASRVARAA
Ga0065707_105894021	3300005295	Switchgrass Rhizosphere	MLTRDKLTVVQWHVVRNTPHHIVMAVSAVGGSVLDEMLERNAGLQGIVDGMHSTHPLVRDIANSVHIMEAQDDVRAWFYTLAETQRTPATLQDKAVESLQQALDALSTLGGVDDLLHYGEFVMA
Ga0070669_1002635452	3300005353	Switchgrass Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGIHSTHPLVREIAGAAHIMEAQDDVRAWYYTLADAQRTSPVLQEKAVETLQQALDALSTQGGADDVL
Ga0070675_1016541682	3300005354	Miscanthus Rhizosphere	MLTRDKLTVVQWHALRNTPHHIVIAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAASAHIMAAQDNVRAWYYTLE
Ga0070674_1001409641	3300005356	Miscanthus Rhizosphere	MLTRDKLTVVQWHALRNTPHHVVIAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAASAHIMAAQDDVRAWYYTLEEAQRTAAVLQEKAVETLQQALDVLSTQGGADDVLPYGEFVMATASPSRAPHARAICSASAANS*
Ga0070673_1007420761	3300005364	Switchgrass Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAGAAHIMEAQEDVRAWYYTLA
Ga0070673_1023749981	3300005364	Switchgrass Rhizosphere	MLTRDKLTVVQWHALRNTPHHIVIAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAASAHIMAAQDDVRAWYYTLEEAQRTAAVLQEKAAVRCASSSV*
Ga0070667_1018672931	3300005367	Switchgrass Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAGAAHIMEAQEDVRAWYYTLAEAQRTSPVLQEKAVETLQ
Ga0070678_1008887812	3300005456	Miscanthus Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVREIAGAAHIMEAQDDVRAWYYTLAEAQRTSPVLQEKAVETLQQALDALSTQGGADDVLHY
Ga0070662_1011482041	3300005457	Corn Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAGAAHIMEAQDDVRAWYYTLADAQRTSPVLQEKAVETLQ
Ga0068859_1007396161	3300005617	Switchgrass Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAGAAHIMEAQEDVRAWYYTLAEA
Ga0068864_1013552051	3300005618	Switchgrass Rhizosphere	MLTRNQLTNVQWQAVRNTPHHVIIAVSAAGGSPFDEMLERAAGLQGIVDAVNSSHPLVSEIAQSRQIMDAQDAVRKWFYTLDEPHRTPEKLQEKALETARHALEA
Ga0068861_1026215581	3300005719	Switchgrass Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAGAAHIMEAQDDVRAWYYTLAEAQRTSPVLQEKAVETLQQALDA
Ga0074471_108151131	3300005831	Sediment (Intertidal)	MLTRDKLTPVQWQAVRNTPHHVIIAVSASGGSAFDEMLERSAGLQAIVDAINSTHPLVSEIGGSTHIMHAQDDVRKWFYTLDEGHRTPDRLQEKALETARHALEALGTHGTAEDLMHYSEFVMSLAM
Ga0079037_1002353842	3300006224	Freshwater Wetlands	MLTRDKLNAAQWRDVRNTPHHVVIAVSASGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIAGSTHIMQAQTEVRSWYYTLQDEHRTPVALQQKAIESMRNALD
Ga0075471_104746672	3300006641	Aqueous	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDASHSTHPLVSEIGGGTHIMQAQDDIRKWFYTLDEGHRTPD
Ga0068865_1016525471	3300006881	Miscanthus Rhizosphere	MLTRDKLTVVQWHALRNTPHHIVIAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAASAHIMAAQDDVRAWYYTLEEAQRTAAVLQEKAVETLQQALDVLSTQGGADDVLPYGE
Ga0074063_111683361	3300006953	Soil	MLTRDKLTADQWRAVRNTPHHVIIAVSASGGSPFDEMLERSAGLQRIVDAMNSSHPLLQEIAGSAHIMHAQDDVRAWYYTLEDAQRVPPRLQAKALESMQHALDALKQH
Ga0105090_102427592	3300009075	Freshwater Sediment	MLTRDSLTAAEWRDVRDTPHHVIVAVSVSGGSPFDEMLERKAGLQAVVDAMHSTHPLVRDIAVSSNIMKAQTDVREWYYTLPEDRRTAVTLRAKALESMGRALDAISAHGAPEDRLHYVEFIVALAT
Ga0105090_105627472	3300009075	Freshwater Sediment	MLTRDKLTVVQWRAVRNTPHHVVVAVSASGGSPFDEMLERSAGLQAIVDAMHSTHPLVRDIADSVHIMRAQDEIRSWYYTLEEVHRTSASLQEKALESMRHALDALDAHGS
Ga0105090_108389232	3300009075	Freshwater Sediment	MLTREELTVEEWRDVRDTPHHVIVAVSVSGGSPLDEMLERHAGLQGVVDAMHSTHPLVRALAVSSNIMQAQTDVRDWYYTVPDAQRTPGTLRTKALDSMGRALN
Ga0105098_100508182	3300009081	Freshwater Sediment	MLTRDKLTVVQWRAVRNTPHHVVVAVSASGGSPFDEMLERSAGLQAIVDAMHSTHPLVRDIADSVHIMRAQDEIRSWYYTLEEVHRTSASLQEKALESMRHALDALD
Ga0105098_100707381	3300009081	Freshwater Sediment	MRTNISEGEESPMLTREKLTIVQWHAVRNTPHHVVVAVSASGGSPFDEMLERSAGLQAIVDAMHSTHPLVREIAGSVHIMQAQQDVRNWYYTLQEPHRTPHSLQ
Ga0105103_106141561	3300009085	Freshwater Sediment	MRGRRDVPRDTNENRVEVSPMLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGHRTPDKLQEKALETARHALEALGTHGSAV
Ga0102851_102113211	3300009091	Freshwater Wetlands	MLTREKLTVVQWHAVRNTPHHVVVAVSASGGSPFDEMLERSAGLQAIVDAMHSTHPLVREIAGSVHIMQAQQDIRNWFYTLQ
Ga0102851_105738682	3300009091	Freshwater Wetlands	MRGRRDVPRDTNENRVEVSPMLTRDKLTIVQWQAVRNTPHHVIIAVSASGGSAFDEMLERSAGLQAIVDAINSTHPLVSEIGGSTHIMHAQDDVRKWFYTLDEGHR
Ga0102851_114697771	3300009091	Freshwater Wetlands	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSPFDEMLERAAGLQAIVDAINSTHPLVSEIAGSTHIMEAQDDIRRWYYTLEEPHRTPQNLQDKALETARHALEA
Ga0111539_127139412	3300009094	Populus Rhizosphere	MLTRNKLTDVQWHALRNAPHHIVIAVSAVGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAASANIMAAQDDVRAWYYTLA
Ga0111539_132132621	3300009094	Populus Rhizosphere	MEDTSMLTRNQLTNVQWQAVRNTPHHVIIAVSAAGGSPFDEMLERAAGLQGIVDAVNSSHPLVSEIAQSAQIMNAQDEVRKWFYTLDEAHRTPEKLQEKALETARHALEALGTHGSPEDLMHYGEFIRAL
Ga0115026_111679911	3300009111	Wetland	MLTRDKLTIVQWRAVRNTPHHVVVAVSATGGSPFDEMLERSAGLQAIVDAMHSTHPLVRDIADSVHIMRAQDEVRS
Ga0115026_116192231	3300009111	Wetland	MIVPSNARRRDVPRHTNENRVEVSPMLTREKLTVVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGHRTPDKLQEKALETARHA
Ga0111538_110071682	3300009156	Populus Rhizosphere	MEDTSMLTRNQLTNVQWQAVRNTPHHVIIAVSAAGGSPFDEMLERAAGLQGIVDAVNSSHPLVSEIAQSAQIMNAQD
Ga0113563_102665471	3300009167	Freshwater Wetlands	MKIDDGGIPMLTRDKLTAIQWQAVRNAPHHVIIAVSSSGGSPFDEMLERAAGLQAIVDAINATHPLVSEIAASTHIMHAQDEVRKWYYTLDEQHRTVEKLQEKALETAKHALEALG
Ga0113563_129877262	3300009167	Freshwater Wetlands	MLTRESLNPAEWRDVRDTPHHVIVAVSVSGGSPFDEMLERRAGLQAVVDAMHSTHPLLRDIAVAENIMKAQTDVRDWYYTLPESQRTPTV
Ga0105097_100754922	3300009169	Freshwater Sediment	MRRRRDVPRHTNENRVEVSPMLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGHRTPDKLQEKALETARHALEALGTHGSAVDLMHYGEFV
Ga0105096_100497411	3300009170	Freshwater Sediment	MEDLRMLTKDKLTVVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQAVVDATNSTHPLVSEIGGSSHIMHAQDDVRKWFYTLDEAHRTPDR
Ga0105096_106700732	3300009170	Freshwater Sediment	MLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIGGSTHIMHAQDDIRKWYYTLDESH
Ga0115028_106012682	3300009179	Wetland	MLTRESLNPAEWRDVRDTPHHVIIAVSVSGGSPFDEMLERRAGLQAVVDAMHSTHPLLRDIAVAENIMKAQTDVREWYYTLPEGQRTPAVL
Ga0115028_113317691	3300009179	Wetland	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSPFDEMLERAAGLQAIVDAINSTHPLVSEIAGSTHIMEAQDDIRRWYYTLEEPHRTPQNLQDKALETARHALEALGTHGTATDLMHY
Ga0115028_119364321	3300009179	Wetland	MLTREKLTVIQWRAVRNTPHHVVVAVSATGGSPFDEMLERAAGLQGIVDAMHSTHPLVREIAGSVHIMEAQDEIRSWYYTLEEVHRTPSSLQEKALESMHHALDAVGTHGGPEDL
Ga0126307_113027262	3300009789	Serpentine Soil	MLTRERLADHHWVSIRNTPHHVIIAVSSAGGSPFDEMLERNAGLQAIVDAMNSTHPLLREIAVAQQIMQAQDHIRAWYYQLQDAHRTSVRLQTQALASLDEALQI
Ga0130016_103605782	3300009868	Wastewater	LTADQWTAVRDTPHHVIIAVSASGGSPFDEMLERNAGLQGVVDAMHSSHPLLREIAASQHIMQAQDAIRSWYYTLADAHRTPPTLQSKALDTF
Ga0164302_111336371	3300012961	Soil	MLTRDKLTAVQWRAVRNTPHHVIVAVSVVGGSVFDEMLERSAGLQGIVDGMNSVHPLVREIAGSAHIMQAQQDIRSWYYTLADADRTPTRL
Ga0157378_116989882	3300013297	Miscanthus Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVREIAGAAHIMEAQDDVRAWYYTLADAQRTSPVLQEKAFETLQQALDALSTQGGADDVLHYGEFIMA
Ga0157375_131203671	3300013308	Miscanthus Rhizosphere	MLTRNQLTNVQWQAVRNTPHHVIIAVSAAGGSPFDEMLERAAGLQGIVDAVNSSHPLVSEIAQSRQIMDAQDAVRKWFYTLDEPHRTPEKLQEKALETARHALEALGTHGGVEDLMHYGEFIRSLA
Ga0075339_10943292	3300014316	Natural And Restored Wetlands	MLTRDSLTAAEWRDVRDTPHHVIVAVSASGGSPLDEMLERHAGLQGVVDAMHSTHPLIRELAVSSNIMQAQTDVREWYYTVPDAERTPATLRAKALDSMGRALDAIGAH
Ga0180094_11703661	3300014881	Soil	MLTRQGLTDHQWVPIRNTPHHVIIAVSAAGGSPFDEMLERSSGLQGIVDAMHSTHPLLREIAVAQHVMQAQDHVRAWYYTLEDAQRTPQRLQAQALASLEQ
Ga0184624_103091551	3300018073	Groundwater Sediment	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAGAAHIMEAQEDVRAWYYTLAEAQRTSPVLQEKAVETLQQALDALST
Ga0184628_100821512	3300018083	Groundwater Sediment	MLTRDKLTIVQWQAVRNTPHHVIIAVSASGGSPFDEMLERAAGLQGIVDAGNSTHPLLSEIAGSAHIMHA
Ga0190274_122061942	3300018476	Soil	MLTRDKLTIVQWQAVRNTPHHVIIAVSASGGSAFDEMLERAAGLQGIVDAGNSTHPLLSEIAGSAHIMHAQDDVRRWFYTLDEDHRTPDNLQEKALETARH
Ga0224505_100318963	3300022214	Sediment	MLTRDKLTQVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQAIVDAINSTHPLVSEIGGSTHIMLAQDEVRKWFYTLDE
Ga0224510_100040657	3300022309	Sediment	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDDMLERSAGLQGIVDASHSSHPLVSEIGGSTHIMHAQDDVRKWFYTLDESHRTPDRLQEKALETARHALEALGTHGSA
Ga0124853_10280421	3300024056	Freshwater Wetlands	MLTRDKLNAAQWRDVRNTPHHVVIAVSASGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIAGSTHIMQAQTEVRSWYYTLQDEHRTPVALQQKAIEPAAEGDR
Ga0124853_14457457	3300024056	Freshwater Wetlands	MLTRDKLSAMQWRAVRDTPHHVVVAVSASGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIAVSTHIMQAQTEVRSWYYTLQDEHRTPGTLQQKAIESMQNALDAIGTHGSPDDLLHYAEFVCRRRTGWRAPPGRATSWESAVNW
Ga0209398_10444482	3300025106	Groundwater	MLTRDRLTEHQWIPIRNTPHHVVIAVSAAGGSPLDDLLEHRAGLQGIVDAMHSTHPLVREIAASHHIMHAQDHVRTWYYTLPDPDRTPTTLQSKAIESFQHALSVLAEHGVRDDQLHYSEFV
Ga0207643_108711271	3300025908	Miscanthus Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVREIAGAAHIMEAQDDVRAWYYTLAEAQRTSPVLQEKAVETLQQALDALSTQGGADDV
Ga0207706_114211502	3300025933	Corn Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAGAAHIMEAQEDVRAWYYTLAE
Ga0207651_114917391	3300025960	Switchgrass Rhizosphere	MLTRDKLTVVQWHALRNTPHHIVIAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAASAHIMAAQDDVRAWYYTLEEAQRTAAVLQEKAAVRCASSSV
Ga0207683_109004431	3300026121	Miscanthus Rhizosphere	MLTRDKLTAVQWRALRNTPHHVVNAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVREIAGAAHIMEAQDDVRAWYYTLAEAQRTSPVLQEKAVETLQQALDALSTQGGADDVLHYG
Ga0207683_115580541	3300026121	Miscanthus Rhizosphere	MLTRDRLADHQWVSIRDTPHHVIIAVSSAGGSPFDEMLERNAGLQAIVDAMHSTHPLLREIAAGPQIMAAQDRVRAWYYRLSD
Ga0256804_10051971	3300026372	Sediment	MLTRDKLRADQWRAVRNTPHHVIVAVSATGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIADSTQIMQAQDEIREWYYTLPDAQRI
Ga0256820_10513602	3300026486	Sediment	MLTRDKLTVAEWRAVRDTPHHVMMAVSSAGGSPFDEMLERNAGLQGIVDAMHSTHPLLRDIAESTQIMQAQTEIRSWYYTLADAHRTPETLREKALESFRKALAA
Ga0256802_10492311	3300026492	Sediment	MLTRDKLRADQWRAVRNTPHHVIVAVSATGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIADSTQIMQAQDEIREWYYTLPDAQRIPSTL
Ga0209392_10231421	3300027683	Freshwater Sediment	MLTKDKLTVVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQAVVDATNSTHPLVSEIGGSSHIMHAQDDVRKWFYTLDE
Ga0209392_11596171	3300027683	Freshwater Sediment	MLTRDSLTAAEWRDVRDTPHHVIVAVSVSGGSPFDEMLERKAGLQAVVDAMHSTHPLVREIAVSSNIMKAQTDVREWYYTLPEDRRTAVTLRAKALESMGR
Ga0209683_105711841	3300027840	Wetland Sediment	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGHTFPAENH
Ga0209254_100026291	3300027897	Freshwater Lake Sediment	MLTRDKLTVAQWRSIRNTPHHVVIAVSSAGGSPFDEMLERTAGMQAIVDAMHSTHPLLREIASSVDIMQAQNEIRAWYYTLPEAQRTPATLQQKATESLQQALDALDAHGGP
Ga0209254_101602882	3300027897	Freshwater Lake Sediment	MLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAIHSTHPLVSEIGGSTHIMHAQDDVRKWFYTLDEGHRTPDKLQEK
Ga0209254_105802302	3300027897	Freshwater Lake Sediment	MLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGHRTPDKLQEKALETARHA
Ga0209254_107330432	3300027897	Freshwater Lake Sediment	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSTGLQGIVDAMHSTHPLVSEIGGSTHIMHAQDDVRKWFYTLDEGHRTPDKLQEK
Ga0209254_108742921	3300027897	Freshwater Lake Sediment	MLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGHRTPDKLQEKALETARHALEALGTHGSAEDLMHYGEFVLSLATR
Ga0209820_10415832	3300027956	Freshwater Sediment	MLTRDKLTVVQWRAVRNTPHHVVVAVSASGGSPFDEMLERSAGLQAIVDAMHSTHPLVRDIADSVHIMGAQDEIRSWYYTLEEVHRTPTNLQEKALE
Ga0209391_100115311	3300027975	Freshwater Sediment	MLTREKLTIVQWHAVRNTPHHVVVAVSASGGSPFDEMLERSAGLQAIVDAMHSTHPLVREIAGSVHIMQAQQDIRNWFY
Ga0209391_101265331	3300027975	Freshwater Sediment	MLTKDKLTVVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQAVVDATNSTHPLVSEIGGSSHIMHAQDDVRKWFYTLDEAHRTPDRLQEKALETARHALEALGTHGSAEDLMHYGEFVLSLATRV
Ga0209391_103116491	3300027975	Freshwater Sediment	MLTRDKLTVVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQAVVDATNSTHPLVSEIGGSSHIMHAQDDVRKWFYTLDEAHRTPDRLQEKALETARHALEALGTHGSAEDLMHYGEFVLSLATRV
Ga0209391_103699991	3300027975	Freshwater Sediment	MLTRDKLTAIQWQAVRNAPHHVIIAVSSSGGSPFDEMLERAAGLQAIVDAINATHPLVSEIAASTHIMSAQDEVRKWYYTLDEQHRTVEKLQ
Ga0310888_106918011	3300031538	Soil	MLTRDKLTVVQWHALRNTPHHIVIAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAASAHIMAAQDDVRAWYYTLEEAQRTAAVLQEKAVETLQQALDVLSTQGGVDDVLPYGEYVMAT
Ga0315297_107307191	3300031873	Sediment	MLTREKLTVVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDALNSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDESHRTPDRLQEKALETAKHALDALGTHGSAEDLMHYGEFVMSLAMRV
Ga0310884_107857201	3300031944	Soil	MLTRDKLTVVQWHALRNTPHHIVIAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAASAHIMAAQDDVRAWYYTLEEAQRTAAVLQEK
Ga0315278_104114522	3300031997	Sediment	MLTHDRLTDEQWQHVRNAPHHVVIAVSAAGGSPFDEMRERSAGLQGIVDAMHSTHPLVREIARSDQILHAQDHVRAWYYTLDDS
Ga0310902_113044801	3300032012	Soil	MLTRDKLTPTQWQAVRNTPHHVVIAVSASGGSPFDEMLERSAGLQGIVDAGNSTHPLVSEIAVSVHIMGAQDDIRRWYYTLEDHHRTPQSLQDKALETARHALEALGTHGTAEDLLHYGEFVL
Ga0310906_106435431	3300032013	Soil	MLTRDKLTQTQWQAVRNTPHHVIIAVSAAGGSPFDEMLERAAGLQGIVDAGNSTHPLVTEIAVSVHIMGAQEEIRRWYYTLE
Ga0310906_110641011	3300032013	Soil	MLTRDKLTVVQWHALRNTPHHIVIAVSAAGGSVFDEMLERNAGLQGIVDGMHSTHPLVRDIAASAHIMAAQDDVRAWYYTLEEAQRTAAVLQEKAVETLQQALDVLSTQGGADDLLPYGEFVMATASRV
Ga0307415_1019102941	3300032126	Rhizosphere	MITRDNLTPTQWQAVRNTPHHVVIAVSASGGSPFDEMLERAAGLQGIVDAGNSTHPLVSEIAVSVHIMGAQDDIRRWYYTLEDQHRTPQSLQDKALETARHALEALGTHGTPDDLLHYGEFVHAL
Ga0315295_116504401	3300032156	Sediment	MLTRDKLTVVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDALNSTHPLVSEIAGSTHIMHAQDDV
Ga0315283_113902501	3300032164	Sediment	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAIHSTHPLVSEIGGSTHIMQAQDDVRKWFYTLDEDHRTPDKLQEKALETARHALEALGTHGSAEDLMHYGEFVLSL
Ga0315276_106675282	3300032177	Sediment	MLTREKLTVVQWQAVRNTPHHVIIAVSSAGGSAFDEMLERSAGLQGIVDALNSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDE
Ga0307471_1033697801	3300032180	Hardwood Forest Soil	MLKRESLTDEQWYAVRNTPHLVILAVSSAGGSPFDEMLERAAGLRAIVDAMNSTHPLLRYIAASEQILGAQDDVRSWYYTLEEPARNQHSLQGKALET
Ga0315287_100231045	3300032397	Sediment	MLTRDKLTVVQWQAVRNTPHHVIIAVSAAGGSAFDEMLERAAGLKGIVDASHSSHPLVSEIGGSTHIMQAQDDVRKWYYTLDEGHRTPDRLQEKALETAKHALEALGTHGS
Ga0315287_127306501	3300032397	Sediment	MLTRDKLTTVQWQAVRNTPHHVIIAVSAAGGSAFDEMLERAAGLKGIVDASHSSHPLVSEIGGGTHIMQAQDDVRKWYYTLDEGHRTPDRLQEKALETAK
Ga0315273_121896562	3300032516	Sediment	MLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAIHSTHPLVSEIGGSTHIMHAQ
Ga0316604_100706421	3300033406	Soil	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSPFDEMLERAAGLQAIVDAINSTHPLVSEIAGSTHIMEAQDDIRRWYYTLEEPHRTPQNLQDKALETAKHALEALGTHGTATDLMHYG
Ga0316604_104433651	3300033406	Soil	MLTRESLNPAEWRDVRDTPHHVIIAVSVSGGSPFDEMLERRAGLQAVVDAMHSTHPLLRDIAVAENIMKAQTDVRDWYYTLPESQRTPTVLRNKALESMGRALDAISAHGAPEDRLHYVEFIV
Ga0316605_115411662	3300033408	Soil	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMH
Ga0316603_114014101	3300033413	Soil	MLTRDKLNAAQWRDVRNTPHHVVIAVSASGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIAGSTHIMQAQTEVRSWYYTLQDEHRTPVALQQKAIESMRNALDAIGTHGSPEDLLHYAE
Ga0316619_100681153	3300033414	Soil	MLTRDKLTIVQWQAVRNTPHHVIIAVSASGGSAFDEMLERSAGLQAIVDAINSTHPLVSEIGGSTHIMHAQDDVRKWFYTLDESHRTPDRLQEKALETARHALEALGTHG
Ga0316619_106175871	3300033414	Soil	MLTRDKLNAAQWRDVRNTPHHVVIAVSASGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIAGSTHIMQAQTEVRSWYYTLQDEHRTPVALQQKAIESMRNALDAIGAHGSPE
Ga0316622_1001558711	3300033416	Soil	MLTRDKLNAAQWRDVRNTPHHVVIAVSASGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIAGSTHIMQAQTEVRSWYYTLQDEHRTPVALQQKAIESMRNA
Ga0316622_1013715091	3300033416	Soil	MLTRDKLTVVQWHAVRNTPHHVVVAVSASGGSPFDEMLERSAGLQAIVDAMHSTHPLVREIAGSVHIMEAQQDIRNWFY
Ga0316625_1011538932	3300033418	Soil	MLTRESLNPAEWRDVRDTPHHVIIAVSVSGGSPFDEMLERRAGLQAVVDAMHSTHPLLRDIAVAENIMKAQTDVRDWYYTLPESQRTPTVLRNKALESMGRA
Ga0316613_101574692	3300033434	Soil	MLTRDKLTVIQWRAVRNTPHHVVVAVSATGGSPFDEMLERSAGLQAIVDAMHSTHPLVRDIADSVHSMRAQ
Ga0316613_106056101	3300033434	Soil	MLTRDKLTAVQWQAVRNAPHHVIIAVSSSGGSPFDEMLERAAGLQAIVDAINATHPLVSEIAGSTHIMHAQDEVRKWYYTLDEHHRTVEKLQEKALETAKHALEALGTHGSAEDLMHYGEFVMSLAM
Ga0316613_106957632	3300033434	Soil	MVTRERLTADQWQAVRDTPHHVIIAVSASGGSPFDEMLERSAGLQGVVDGMNSSHPLLREIAASHHIMQAQDAIRSWYYTLADAHRTPPTLQTKALDTF
Ga0316613_111383241	3300033434	Soil	MLTRDKLNAAQWRDVRNTPHHVVIAVSASGGSPFDEMLERSAGLQGIVDAMHSTHPLVREIAGSTHIMQAQTEVRSWYYTLQDEHRTPVALQQKAIESMRNALDAIGTH
Ga0316600_104931382	3300033481	Soil	MLTRERLTIVQWRAVRNTPHHVIVAVSSSGGSAFDEMLERSAGLQAIVDAMNSTHPLVREIAGSTHIMQAQDEIRSWYYTLQETHRTPQSLQEKALESMHHALDALDVHGTPEDLLHYAEFVLSTAN
Ga0316600_105883882	3300033481	Soil	MLTRESLNPAEWRDVRDTPHHVIIAVSVSGGSPFDEMLERRAGLQAVVDAMHSTHPLLRDIAVAENIMKAQTDVRDWYYTLPESQRTPTVLRNKAL
Ga0316600_109457582	3300033481	Soil	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDESHRTPDRLQEKALETARHALEALGTHGSA
Ga0316600_111086842	3300033481	Soil	MLTREKLTVVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGHRTPDKLQEK
Ga0316627_1003985631	3300033482	Soil	MLTRETLNPAEWRDVRDTPHHVIVAVSVSGGSPFDEMLERKAGLQAVVDAMHSTHPLLRDIAVAENIMKAQTDVREWYYTLPEGQRTPAVLRNKA
Ga0316627_1025335722	3300033482	Soil	MLTRDKLTAIQWQAVRNAPHHVIIAVSSSGGSPFDEMLERAAGLQAIVDAINATHPLVSEIAASTHIMHAQDEVRKWYYTLDEQHRTVEKLQEKALETAKHALEALGTHGSADDLMHYGEFVMSLAMRVA
Ga0316629_100962752	3300033483	Soil	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSPFDEMLERAAGLQAIVDAINSTHPLVSEIAGSTHIMEAQDDIRRWYYTLEEPHRTPQNLQDKALETAKHAL
Ga0316629_113627212	3300033483	Soil	MLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAIHSSHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGHRTPDRLQEK
Ga0316629_116125251	3300033483	Soil	MLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGH
Ga0316626_107373201	3300033485	Soil	MLTRDKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQAIVDAINSTHPLVSEIGGSTHIMHAQDDVRKWFYTLDEGHRTPDRLQEKALETARHALEALGTHGTAD
Ga0316621_108744412	3300033488	Soil	MLTRESLNPAEWRDVRDTPHHVIIAVSVSGGSPFDEMLERRAGLQAVVDAMHSTHPLLRDIAVAENIMKAQTDVRDWYYTLPESQRTPTVLRNKALESMGRALDA
Ga0316616_1006062551	3300033521	Soil	MLTRDKLTIVQWQAVRNTPHHVIIAVSASGGSAFDEMLERSAGLQAIVDAINSTHPLVSEIGGSTHIMHAQDDVRKWFYT
Ga0364929_0305412_314_544	3300034149	Sediment	MLTRDKLTIVQWQAVRNTPHHVIIAVSASGGSPFDEMLERAAGLQGIVDAGNSTHPLLSEIAGSAHIMHAQDDVRRW
Ga0370499_0178760_1_351	3300034194	Untreated Peat Soil	MRRRRDGPRDTNENRVEVSPMLTREKLTIVQWQAVRNTPHHVIIAVSSSGGSAFDEMLERSAGLQGIVDAINSTHPLVSEIAGSTHIMHAQDDVRKWFYTLDEGHRTPDNLQEKALE
Ga0370503_0215207_312_686	3300034196	Untreated Peat Soil	MIHPARAHAPRRVVRTKENKVEDSPMLTRDKLTTVQWQAVRNTPHHVIIAVSASGGSAFDEMLERSAGLQGIVDAINSTHPLLSDIAGSTHIMHAQDDVRKWFYTLDDSHRTPANLQEKALETAR
Ga0364943_0067401_3_212	3300034354	Sediment	MVTRQVLTDTQWSAVRNTPHHVILAVSSTGGSPFDEMLERAAGLQAIVDALNSTHPLLREIAASDHIMHA
Ga0373918_0068774_581_877	3300034420	Sediment Slurry	MLTRDKLTTVQWQAVRNTPHHVIIAVSASGGSAFDEMLERSAGLQAIVDAINSTHPLVSEIGGSTHIMHAQDDVRNWFYTLDETHRTPDRLQEKALETA
Ga0373918_0175561_3_254	3300034420	Sediment Slurry	MLTREKLTVVQWQAVRNTPHHVVIAVSAAGGSAFDEMLERAAGMQGIVDAINSTHPLVSDIGGSTHIMHAQDDIRKWYYTLDES
Ga0373917_0099010_3_353	3300034692	Sediment Slurry	MLTRDKLTTVQWQAVRNTPHHVIIAVSASGGSAFDEMLERSAGLQAIVDAINSTHPLVSEIGGSTHIMHAQDEVRKWFYTLDETHRTPDRLQEKALETARHALEALGTHGTAEDLMH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055828

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign