Metagenome / Metatranscriptome Family F055459

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055459
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	81 residues
Representative Sequence	MSIFGRKVDDDFDALINAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Number of Associated Samples	106
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.86 %
% of genes near scaffold ends (potentially truncated)	28.26 %
% of genes from short scaffolds (< 2000 bps)	71.01 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.145 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (50.725 % of family members)
Environment Ontology (ENVO)	Unclassified (60.145 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.449 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.04% β-sheet: 0.00% Coil/Unstructured: 41.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF07886	BA14K	22.46
PF11684	DUF3280	10.14
PF07080	DUF1348	2.17
PF00672	HAMP	0.72
PF14497	GST_C_3	0.72
PF01609	DDE_Tnp_1	0.72
PF12244	DUF3606	0.72
PF00583	Acetyltransf_1	0.72
PF13472	Lipase_GDSL_2	0.72
PF12799	LRR_4	0.72
PF00892	EamA	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	2.17
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.72
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.72
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.72
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.72
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.72
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.14 %
Unclassified	root	N/A	39.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.14 %
Unclassified	root	N/A	39.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.14 %
Unclassified	root	N/A	39.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.14 %
Unclassified	root	N/A	39.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58.70 %
Unclassified	root	N/A	39.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	34.06 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	19.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.77 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	2.17 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.90 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	18.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.77 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	2.17 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.90 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.77 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2.17 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.90 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	1.45 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.72 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.72 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.77 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2.17 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.90 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1.45 %
Ensifer alkalisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer alkalisoli	0.72 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.72 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908029\|A2_v1_NODE_3842_len_11158_cov_9_796289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	11208	Open in IMG/M
3300000732\|JGI12023J11887_1010795	Not Available	543	Open in IMG/M
3300000908\|JGI11915J12861_104369	Not Available	536	Open in IMG/M
3300001593\|JGI12635J15846_10760154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	556	Open in IMG/M
3300001661\|JGI12053J15887_10020397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3707	Open in IMG/M
3300001661\|JGI12053J15887_10047097	Not Available	2416	Open in IMG/M
3300002245\|JGIcombinedJ26739_100008710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8112	Open in IMG/M
3300002245\|JGIcombinedJ26739_101271454	Not Available	626	Open in IMG/M
3300005471\|Ga0070698_100342562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1426	Open in IMG/M
3300005553\|Ga0066695_10612673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	651	Open in IMG/M
3300005993\|Ga0080027_10003343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6064	Open in IMG/M
3300006041\|Ga0075023_100460678	Not Available	564	Open in IMG/M
3300006041\|Ga0075023_100510815	Not Available	543	Open in IMG/M
3300006047\|Ga0075024_100110414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1216	Open in IMG/M
3300006050\|Ga0075028_100220597	Not Available	1031	Open in IMG/M
3300007255\|Ga0099791_10015213	Not Available	3269	Open in IMG/M
3300007258\|Ga0099793_10085082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1448	Open in IMG/M
3300007258\|Ga0099793_10226081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	900	Open in IMG/M
3300007265\|Ga0099794_10061738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1822	Open in IMG/M
3300009038\|Ga0099829_10005161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7918	Open in IMG/M
3300009038\|Ga0099829_10196261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1631	Open in IMG/M
3300009088\|Ga0099830_10233466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1450	Open in IMG/M
3300009090\|Ga0099827_10108019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2223	Open in IMG/M
3300009143\|Ga0099792_10079873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1672	Open in IMG/M
3300009143\|Ga0099792_10256917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1020	Open in IMG/M
3300009143\|Ga0099792_10290344	Not Available	967	Open in IMG/M
3300009143\|Ga0099792_10523758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300009143\|Ga0099792_10928924	Not Available	577	Open in IMG/M
3300009660\|Ga0105854_1247415	Not Available	607	Open in IMG/M
3300009661\|Ga0105858_1034916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1283	Open in IMG/M
3300010877\|Ga0126356_10723665	Not Available	711	Open in IMG/M
3300011269\|Ga0137392_10628903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300011270\|Ga0137391_10094803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2582	Open in IMG/M
3300011271\|Ga0137393_10015387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5440	Open in IMG/M
3300011271\|Ga0137393_10128764	Not Available	2095	Open in IMG/M
3300011271\|Ga0137393_10493497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1050	Open in IMG/M
3300011444\|Ga0137463_1012109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2975	Open in IMG/M
3300011444\|Ga0137463_1222284	Not Available	706	Open in IMG/M
3300012096\|Ga0137389_10393758	Not Available	1182	Open in IMG/M
3300012198\|Ga0137364_10005778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6668	Open in IMG/M
3300012198\|Ga0137364_10170721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1583	Open in IMG/M
3300012199\|Ga0137383_10038745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3378	Open in IMG/M
3300012200\|Ga0137382_10131036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1684	Open in IMG/M
3300012206\|Ga0137380_10773648	Not Available	830	Open in IMG/M
3300012207\|Ga0137381_10072438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2883	Open in IMG/M
3300012207\|Ga0137381_11385739	Not Available	595	Open in IMG/M
3300012208\|Ga0137376_10131290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2144	Open in IMG/M
3300012211\|Ga0137377_10094856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2821	Open in IMG/M
3300012211\|Ga0137377_10507250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1144	Open in IMG/M
3300012285\|Ga0137370_10163914	Not Available	1291	Open in IMG/M
3300012351\|Ga0137386_10308249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1139	Open in IMG/M
3300012357\|Ga0137384_10145211	All Organisms → cellular organisms → Bacteria → Proteobacteria	1986	Open in IMG/M
3300012357\|Ga0137384_10354628	Not Available	1215	Open in IMG/M
3300012359\|Ga0137385_10043490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	4025	Open in IMG/M
3300012359\|Ga0137385_10107328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2473	Open in IMG/M
3300012361\|Ga0137360_10779948	Not Available	822	Open in IMG/M
3300012683\|Ga0137398_10414439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	918	Open in IMG/M
3300012685\|Ga0137397_10621049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	804	Open in IMG/M
3300012918\|Ga0137396_10040675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3139	Open in IMG/M
3300012918\|Ga0137396_10915922	Not Available	641	Open in IMG/M
3300012923\|Ga0137359_11423523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer alkalisoli	581	Open in IMG/M
3300012924\|Ga0137413_10251562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1213	Open in IMG/M
3300012925\|Ga0137419_11183108	Not Available	639	Open in IMG/M
3300012927\|Ga0137416_10094377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2234	Open in IMG/M
3300012927\|Ga0137416_10707329	Not Available	886	Open in IMG/M
3300012927\|Ga0137416_11907170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	544	Open in IMG/M
3300012929\|Ga0137404_11405816	Not Available	644	Open in IMG/M
3300012930\|Ga0137407_10805040	Not Available	887	Open in IMG/M
3300012944\|Ga0137410_10065090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2630	Open in IMG/M
3300015197\|Ga0167638_1048992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	922	Open in IMG/M
3300015242\|Ga0137412_10054525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3258	Open in IMG/M
3300015242\|Ga0137412_10568161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	861	Open in IMG/M
3300015245\|Ga0137409_10122295	Not Available	2397	Open in IMG/M
3300015264\|Ga0137403_10673819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	895	Open in IMG/M
3300015264\|Ga0137403_10708308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300015264\|Ga0137403_10800200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	798	Open in IMG/M
3300018027\|Ga0184605_10134310	Not Available	1107	Open in IMG/M
3300018028\|Ga0184608_10010795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3107	Open in IMG/M
3300018051\|Ga0184620_10008199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2289	Open in IMG/M
3300018052\|Ga0184638_1165507	Not Available	792	Open in IMG/M
3300018052\|Ga0184638_1225967	Not Available	653	Open in IMG/M
3300018053\|Ga0184626_10079912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1381	Open in IMG/M
3300018482\|Ga0066669_10393421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1170	Open in IMG/M
3300019789\|Ga0137408_1027844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2877	Open in IMG/M
3300019789\|Ga0137408_1252071	Not Available	885	Open in IMG/M
3300019789\|Ga0137408_1349722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2010	Open in IMG/M
3300019866\|Ga0193756_1038314	Not Available	673	Open in IMG/M
3300019877\|Ga0193722_1021033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1685	Open in IMG/M
3300019880\|Ga0193712_1050167	Not Available	910	Open in IMG/M
3300019886\|Ga0193727_1035807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1671	Open in IMG/M
3300019887\|Ga0193729_1006104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5697	Open in IMG/M
3300020002\|Ga0193730_1121987	Not Available	713	Open in IMG/M
3300020004\|Ga0193755_1018110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2322	Open in IMG/M
3300020004\|Ga0193755_1182463	Not Available	614	Open in IMG/M
3300020012\|Ga0193732_1003616	Not Available	2732	Open in IMG/M
3300020059\|Ga0193745_1074813	Not Available	738	Open in IMG/M
3300020170\|Ga0179594_10207931	Not Available	734	Open in IMG/M
3300020199\|Ga0179592_10073942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1561	Open in IMG/M
3300021086\|Ga0179596_10109679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1266	Open in IMG/M
3300021086\|Ga0179596_10197611	Not Available	978	Open in IMG/M
3300021086\|Ga0179596_10204211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	963	Open in IMG/M
3300021344\|Ga0193719_10017121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3074	Open in IMG/M
3300021363\|Ga0193699_10014794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2817	Open in IMG/M
3300021363\|Ga0193699_10074226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1347	Open in IMG/M
3300026214\|Ga0209838_1048708	Not Available	623	Open in IMG/M
3300026345\|Ga0257148_1009997	Not Available	717	Open in IMG/M
3300026359\|Ga0257163_1026917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	900	Open in IMG/M
3300026467\|Ga0257154_1078064	Not Available	527	Open in IMG/M
3300026489\|Ga0257160_1012866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1231	Open in IMG/M
3300026508\|Ga0257161_1058278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300026557\|Ga0179587_11135669	Not Available	514	Open in IMG/M
3300027388\|Ga0208995_1051560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300027512\|Ga0209179_1050437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	891	Open in IMG/M
3300027521\|Ga0209524_1026372	Not Available	1210	Open in IMG/M
3300027535\|Ga0209734_1008368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1857	Open in IMG/M
3300027546\|Ga0208984_1129483	Not Available	543	Open in IMG/M
3300027616\|Ga0209106_1108952	Not Available	621	Open in IMG/M
3300027663\|Ga0208990_1102402	Not Available	794	Open in IMG/M
3300027678\|Ga0209011_1005830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4234	Open in IMG/M
3300027727\|Ga0209328_10128272	Not Available	774	Open in IMG/M
3300027846\|Ga0209180_10050572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2292	Open in IMG/M
3300027894\|Ga0209068_10157032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1234	Open in IMG/M
3300027903\|Ga0209488_10196776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1519	Open in IMG/M
3300027903\|Ga0209488_10631010	Not Available	774	Open in IMG/M
3300027910\|Ga0209583_10052785	Not Available	1437	Open in IMG/M
3300028047\|Ga0209526_10022385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4417	Open in IMG/M
3300028536\|Ga0137415_10015963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7450	Open in IMG/M
3300028792\|Ga0307504_10482405	Not Available	502	Open in IMG/M
3300028824\|Ga0307310_10022580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2482	Open in IMG/M
3300029987\|Ga0311334_10054520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	2852	Open in IMG/M
3300030904\|Ga0308198_1031439	Not Available	760	Open in IMG/M
3300031093\|Ga0308197_10466519	Not Available	510	Open in IMG/M
3300031152\|Ga0307501_10069819	Not Available	830	Open in IMG/M
3300031421\|Ga0308194_10246397	Not Available	598	Open in IMG/M
3300031507\|Ga0307509_10316237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1301	Open in IMG/M
3300031616\|Ga0307508_10320307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1142	Open in IMG/M
3300033433\|Ga0326726_10189445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1894	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.55%
Host-Associated	Host-Associated	1.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.41%
Aquatic	Environmental → Aquatic	10.14%
Plants	Host-Associated → Plants	1.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.96%
Sediment	Environmental → Aquatic → Sediment	10.14%
Peat	Environmental → Terrestrial → Peat	1.45%
Roots	Host-Associated → Plants → Roots	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.74%
Loam	Environmental → Terrestrial → Soil → Loam	12.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	65.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.45%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	50.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.35%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.62%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.45%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.45%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.45%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908029	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300000732	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2	Environmental	Open in IMG/M
3300000908	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026345	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_v1_00014470	2124908029	Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVSDLIELNEDALSDRKRGEPEDW
JGI12023J11887_10107951	3300000732	Forest Soil	MGIFGRKVDDEFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRQALAMHVQAVRDLIELNEDALATRNRGEPEDW*
JGI11915J12861_1043691	3300000908	Forest Soil	MSIFGRKVDDDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
JGI12635J15846_107601541	3300001593	Forest Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVRDLIELNEDALSNRKRGEP
JGI12053J15887_100203972	3300001661	Forest Soil	MSIFRRKVDGDFDALIHAIGSLLHGKGPDLQGAVLADLVSRWIVGHHPSLRHQVLAQHVQAVRDLIKLSEEALAARNNGEAEDW*
JGI12053J15887_100470973	3300001661	Forest Soil	MSIFGRKVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
JGIcombinedJ26739_1000087102	3300002245	Forest Soil	MGIFGRKGDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVSDLIELNEDALSDRKRGEAEDW*
JGIcombinedJ26739_1012714541	3300002245	Forest Soil	MGIFGRKVDDDFDALIHAIGRLLHGKDHDLQRAVLNDLVSRWIMGHHPSQRRQALAMHVQAVRDLIELNEDALSARNRGESEDW*
Ga0070698_1003425622	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRQALAIHVQAVRDLIELNEDALSDRKRGEPEDW*
Ga0066695_106126731	3300005553	Soil	MGIFGRNADHDFDALIHAIGPLLHGKGPDLQHAVLADLVARWITGYRPSQRAHLLARHVQAVRDLIELKEEAQSARNGDEPEDW*
Ga0080027_1000334311	3300005993	Prmafrost Soil	MSIFGRKVDDDFDALINPIGRLLHGKGADLQRAVLTDLVSRWIMGHHPSQRRHALAMHVQAVRDLIELNEDALSARNHGEPEDW*
Ga0075023_1004606782	3300006041	Watersheds	MSIFGRKVDDDFDALTNAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARKKGETEDW*
Ga0075023_1005108152	3300006041	Watersheds	MSIFGRKVDDDFDALINAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARKRGEPEDW*
Ga0075024_1001104143	3300006047	Watersheds	MGIFGRKVDGDFDALMHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVRDLIELNEDAVTDRKRGEPEDW*
Ga0075028_1002205971	3300006050	Watersheds	MSIFGRKVDDDFDALINAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0099791_100152136	3300007255	Vadose Zone Soil	MGIFGRKVDDDFDALINAIGRLLQGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0099793_100850822	3300007258	Vadose Zone Soil	MMSIFGRKVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0099793_102260812	3300007258	Vadose Zone Soil	MGIFGRKDDHDFDSLIHAIGPLLHGKGPDLQGAVLAHLVSAWIIGHHPSVRNHVLARHVQAVRDHVELHEDTLSVRKSGEPEDW*
Ga0099794_100617382	3300007265	Vadose Zone Soil	MGIFGRKADHDFDALIHAIGPLLHGKGADLQRAVLADLVSRWIVGHHPSVRAHLLKQHVQAVRDLIKLKEEAQSVRNGGEPDDW*
Ga0099829_100051614	3300009038	Vadose Zone Soil	MSIFGRKVDDDFDALTNAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0099829_101962615	3300009038	Vadose Zone Soil	GRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAMHVQAVRDLIELNEDALSTRNRGEPEDW*
Ga0099830_102334662	3300009088	Vadose Zone Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAMHVQAVRDLIELNEDALSTRNRGEPEDW*
Ga0099827_101080192	3300009090	Vadose Zone Soil	MSIFGRKVDDDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNKGEPEDW*
Ga0099792_100798733	3300009143	Vadose Zone Soil	MGIFGRKVDDDFDALINAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNR
Ga0099792_102569173	3300009143	Vadose Zone Soil	MGIFGRKVDDDFDALILAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAMHVQAVRDLIELNEDALSTRNRGEPEDW*
Ga0099792_102903442	3300009143	Vadose Zone Soil	LPRREGGDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNKGEPEDW*
Ga0099792_105237581	3300009143	Vadose Zone Soil	TMGIFGRKDDHDFDSLIHAIGPLLHGKGPDLQGAVLAHLVSAWIIGHHPSVRNHVLARHVQAVRDHVELHEDTLSVRKSGEPEDW*
Ga0099792_109289241	3300009143	Vadose Zone Soil	MSIFRRKVDDDFDALTNAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0105854_12474151	3300009660	Permafrost Soil	MSIFGRKDDHDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVSDLIELNEDALSDRKRGEPEDW*
Ga0105858_10349163	3300009661	Permafrost Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVSDLIELNEDALSDRKRGEPEDW*
Ga0126356_107236652	3300010877	Boreal Forest Soil	MGIFGRKVDDDFDALINAIGRLLQGKGADLQRAVLTDIVSRWIMGHHPSLRRQALAAHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0137392_106289031	3300011269	Vadose Zone Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAMHVQAVRDLIELNEDALSDRKRDEPEDW*
Ga0137391_100948033	3300011270	Vadose Zone Soil	MGIFGRKVDDEFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRQALAIHVQAVRDLIELNEDALSDHKRGEPEDW*
Ga0137393_100153875	3300011271	Vadose Zone Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAMHVQAVRDLIELNEDALSDRKRGEPEDW*
Ga0137393_101287641	3300011271	Vadose Zone Soil	MIIFGRKVDDDFDALTNAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQSLATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0137393_104934972	3300011271	Vadose Zone Soil	MGIFGRKADHDFDALIHAIGPLLHGKGPDLQRAVLADLVSRWIVGHHPSQRAHLLTLHVQAVRDLIELKEEALSARNDDEPEDW*
Ga0137463_10121091	3300011444	Soil	MMSIFGRKVDHDFDALINAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARKRGEPEDW*
Ga0137463_12222842	3300011444	Soil	MGIFGQKTDHDFDSLIHAIGPLLHGKGADLQRAVLADLVARWIVGHHPSRRARLLAMHVQAVRDLIELKQEAQSARDGDEPEDW*
Ga0137389_103937581	3300012096	Vadose Zone Soil	MMSIFGRKVDDDFDALINAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0137364_1000577810	3300012198	Vadose Zone Soil	MSIFGRKNDHDFDALIGAIGPLLHNKGPDLQGAVLADLVSKWIVGHHPSSRASALTRHVQAVRDLVELKEEALFARRLGKPDDW*
Ga0137364_101707212	3300012198	Vadose Zone Soil	MSIFGRKVDDDFDALSNAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNKGEPEDW*
Ga0137383_100387452	3300012199	Vadose Zone Soil	MSIFGRKVDDDFDALTNAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNKGEPEDW*
Ga0137382_101310363	3300012200	Vadose Zone Soil	MSIFRRKVDDDFDALTNAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARN
Ga0137380_107736482	3300012206	Vadose Zone Soil	MGIFGRKADHDFDALIHAIGPLLHGKGPDLQHAVLADLVARWIAGHRPSQRAHLLARHVQAVRDLIELKEEARSARNGDEPEDW*
Ga0137381_100724381	3300012207	Vadose Zone Soil	DDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNKGEPEDW*
Ga0137381_113857392	3300012207	Vadose Zone Soil	MSIFGRKNDHDFDALIGAIGPLLHNKGPDLQGAVLADLDSKWIVGHHPSSRASALTRHVQAVRDLVELKEDALF
Ga0137376_101312903	3300012208	Vadose Zone Soil	MGIFGRNADHDFDALIHAIGPLLHGKGPDLQHAVLADLVARWIAGYRPSQRAHLLARHVQAVRDLIELKEEARSARNGDEPEDW*
Ga0137377_100948563	3300012211	Vadose Zone Soil	MGIFGRNADHDFDALIHAIGPLLHGKGPDLQHAVLADLVARWITGYRPSQRAHLLARHVQAVRDLIELKEEA
Ga0137377_105072502	3300012211	Vadose Zone Soil	MSIFGRKVDDDFDALSNAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNKGEPEDW*
Ga0137370_101639142	3300012285	Vadose Zone Soil	MSIFGRKNDHDFDALIGAIGPLLHNKGPDLQGAVLADLVSKWIVGHHPSSRASALTRHVQAVRDLVESKEEALFARRLGKPDDW*
Ga0137386_103082492	3300012351	Vadose Zone Soil	MGIFGRNADHDFDALIHAIGPLLHGKGPDLQHAVLADLVARWIAGHRPSQRAHLLARPVQAVRDLIELKEEAQSARDGEEPEDW*
Ga0137384_101452113	3300012357	Vadose Zone Soil	MGIFGRNADHDFDALIHAIGPLLHGKGPDLQHAVLADLVARWITGYRPSQRAHLLARHVQAVRDLIELKEEARSARNGDEPEDW*
Ga0137384_103546282	3300012357	Vadose Zone Soil	AIGPLLHNKGPDLQGAVLADLVSKWIVGHHPSSRASALTRHVQAVRDLVELKEEALFARRLGKPDDW*
Ga0137385_100434905	3300012359	Vadose Zone Soil	MGIFGRKADHDFDALIHAIGPLLHGKGPDLQHAVLADLVARWITGYRPSQRAHLLARHVQAVRDLIELKEEAQSARNGDEPEDW*
Ga0137385_101073282	3300012359	Vadose Zone Soil	MSIFRRKVDDDFDALTNAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNKGEPEDW*
Ga0137360_107799482	3300012361	Vadose Zone Soil	MSIFGRKVDDDFDALTNAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0137398_104144392	3300012683	Vadose Zone Soil	MSIFGRKVDDDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARN
Ga0137397_106210491	3300012685	Vadose Zone Soil	MGIFGRKADHDFDALIHAIGPLLHGKGADLQRAVLADLVSRWIVGHHPSVRAHLLKQHAQAVRDLIKLKEEAQSVRNGGEPEDW*
Ga0137396_100406757	3300012918	Vadose Zone Soil	MGIFGRKDDHAFDSLIHAIGPLLHGKGPDLQGAVLAHLVSAWIIGHHPSVRNHVLARHVQAVRDHVELHEDTLSVRKSGEPEDW*
Ga0137396_109159221	3300012918	Vadose Zone Soil	VDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0137359_114235231	3300012923	Vadose Zone Soil	DALIHAIGPLLHGKGPDLQHAVLADLVARWITGYRPSQRAHLLARHVQAVRDLIELKEEAQSARNGDEPEDW*
Ga0137413_102515621	3300012924	Vadose Zone Soil	MSIFGRKVDDDFDALTNAIGRLLQGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0137419_111831081	3300012925	Vadose Zone Soil	MSIFGRKVDDDFDTLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEP
Ga0137419_117805632	3300012925	Vadose Zone Soil	GPLLHGKGPDLQGAALAELVSRWIAGHHPSLRAHALAQHFHAVRDLIRLNEETLAIRNSGEPEDW*
Ga0137416_100943775	3300012927	Vadose Zone Soil	MGIFGRKDDHDFDSLIHAIGPLLHGKGPDLQGAVLAHLVSAWIIGHHPSVRNHVLARHIQAVRDHVELHEDTLSVRKSGEPEDW*
Ga0137416_107073292	3300012927	Vadose Zone Soil	LTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0137416_119071702	3300012927	Vadose Zone Soil	MGIFGRKADHDFDALIHAIGPLLHGKGADLQRAVLADLVSRWIVGHHPSVRAHLLKQHVQAVRDFIKLKEEAQSVRNGGEPEDW*
Ga0137404_114058161	3300012929	Vadose Zone Soil	DDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0137407_108050401	3300012930	Vadose Zone Soil	MGIFGRRADHDFDALIHAIGPLLHGKGPDLQHAVLADLVARWITGYRPSQRAHLLARHVQAVRDLIELKEEAQSARNGDEPEDW*
Ga0137410_100650904	3300012944	Vadose Zone Soil	MGIFGRKADHDFDALIHAIGPLLHGKGADLQRAVLADLVSRWIVGHHPSVRAHLLKQHVQAVRDFIKLKEEAQSVRNGGEPDDW*
Ga0167638_10489922	3300015197	Glacier Forefield Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVSDLIELN
Ga0137412_100545257	3300015242	Vadose Zone Soil	MSIFRRKVDDDFDALTNAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEAL
Ga0137412_105681612	3300015242	Vadose Zone Soil	MMSIFGRKVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEAL
Ga0137409_101222954	3300015245	Vadose Zone Soil	MGIFGRKVDDDFDALINAIGRLLQGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW*
Ga0137403_106738192	3300015264	Vadose Zone Soil	MSIFGRKVDDDFDVLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSA
Ga0137403_107083082	3300015264	Vadose Zone Soil	MMSIFGRKVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSA
Ga0137403_108002002	3300015264	Vadose Zone Soil	MGIFGRKADHDFDALIHAIGPLLHGKGADLQRAVLADLVSRWIVGHHPSVRAHLLKQHVQTVRDIIKLKEEAQSVRNGGEPEDW*
Ga0184605_101343101	3300018027	Groundwater Sediment	MSIFGRKVDDDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0184608_100107956	3300018028	Groundwater Sediment	MGIFGRKVDDEFDALINAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0184620_100081994	3300018051	Groundwater Sediment	MGIFGRKVDDDFDALINAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0184638_11655072	3300018052	Groundwater Sediment	DALINAIGRLLQGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDC
Ga0184638_12259671	3300018052	Groundwater Sediment	MSIFGRKIDDDFDTLTNAIGRLLHGKDEDLQRAVVTDMVSRWIMGHHPSLRRQALTMHVQAVRDLIELNEDALSARNRGEPEDW
Ga0184626_100799121	3300018053	Groundwater Sediment	MSIFGRKIDDDFDALTNAIGRLLHGKDEDLQRAVVTDMVSRWIMGHHPSLRRQALTMHVQAVRDLIELNEDALSARNRGEPEDW
Ga0066669_103934212	3300018482	Grasslands Soil	MGIFGRKADHDFDALIHAIGPLLHGKGPDLQHAVLADLVARWITGHRPSQRAHLLARHVQAVRDLIELKEEAQSARNGDEPEDW
Ga0137408_10278443	3300019789	Vadose Zone Soil	MGIFGRKVDDDFDALINAIGRLLQGKGADLQRAVLTDIVSRWIMGHHPSLRRQALAAHVQAVRDLIELNEEALSARNRGEPEDW
Ga0137408_12520711	3300019789	Vadose Zone Soil	MSIFGRKVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0137408_13497222	3300019789	Vadose Zone Soil	MSIFGRKVDDDFDVLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0193756_10383141	3300019866	Soil	NAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0193722_10210332	3300019877	Soil	MGIFGRKVDDDFDALINAMGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0193712_10501671	3300019880	Soil	MMSIFGRKVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0193727_10358072	3300019886	Soil	MGIFGRKVDDDFDALINAIGRLLQGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0193729_100610414	3300019887	Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVRDLIELNEDALSDRKRGEPEDW
Ga0193730_11219872	3300020002	Soil	MGIFGQKTDHDFDSLIHAIGPLLHGKGADLQRAVLADLVARWIVGHHPSRRARLLAMHVQAVRDLVELKEEAQSRDGNEVEDW
Ga0193755_10181101	3300020004	Soil	MGIFGRKADHDFDALIHAIGPLLHGKGADLQRAVLADLVSRWIVGHHPSVRAHLLKQHVQAVRDLI
Ga0193755_11824631	3300020004	Soil	MSIFGRKVDDDFDALINAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0193732_10036161	3300020012	Soil	MSIFGRKDDHDFDALIHAMGPLLRGKGPDLQGAVLAHLVSTWIIGHHPSWRDRVLARHVREVRDLIELNEEALSARNRGEPEDW
Ga0193745_10748131	3300020059	Soil	MGIFGRKVDDDFDALINAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0179594_102079311	3300020170	Vadose Zone Soil	MGIFGRKVDDDFDALINAIGRLLQGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0179592_100739423	3300020199	Vadose Zone Soil	MGIFGRKVDDEFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRQALAMHVQAVRDLIELNEDALATRNRGEPEDW
Ga0179596_101096792	3300021086	Vadose Zone Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAMHVQAVRDLIELNEDALSTRNRGEPEDW
Ga0179596_101976112	3300021086	Vadose Zone Soil	KVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0179596_102042112	3300021086	Vadose Zone Soil	MSIFGRKVDDDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSARNKGEPEDW
Ga0193719_100171211	3300021344	Soil	MSIFGRKVDDDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEEALSA
Ga0193699_100147943	3300021363	Soil	MGIFGRKADHDFDALIHAIGPLLHGKGADLQRAVLADLVSRWIVGHHPSVRAHLLKQHVQAVRDFIKLKEEAQSVRNGGEPEDW
Ga0193699_100742262	3300021363	Soil	MGIFGRKVDDDFDALINAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARKRGEPEDW
Ga0209838_10487081	3300026214	Soil	MSIFGRKVDDDFDALINPIGRLLHGKGADLQRAVLTDLVSRWIMGHHPSQRRHALAMHVQAVRDLIELNEDALSARNHGEPEDW
Ga0257148_10099972	3300026345	Soil	MSIFGRKVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSA
Ga0257163_10269172	3300026359	Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAMHVQAVRDLIELNEDALSTRN
Ga0257154_10780641	3300026467	Soil	MMSIFGRKVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEA
Ga0257160_10128661	3300026489	Soil	DDFDALIHAIGRLLHGKDHDLQRAVLNDLVSRWIMGHHPSQRRQALAMHVQAVRDLIELNEDALSARNRGESEDW
Ga0257161_10582781	3300026508	Soil	IHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAMHVQAVRDLIELNEDALSARNRGESEDW
Ga0179587_111356691	3300026557	Vadose Zone Soil	MGIFGRKDDHDFDSLIHAIGPLLHGKGPDLQGAVLAHLVSAWIIGHHPSVRNHVLARHVQAVRDHVELHEDTLSVRKSGEPEDW
Ga0208995_10515602	3300027388	Forest Soil	MGIFGRKDDHDFDSLIHAIGPLLHGKGPDLQGAVLAHLVSAWIIGHHPSVRNHVLARHVQAVRDHVELHEDTLSVRKSGEAEDW
Ga0209179_10504371	3300027512	Vadose Zone Soil	MSIFGRKVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPE
Ga0209524_10263721	3300027521	Forest Soil	MGIFGRKGDDDFDALIHAIGRLLHGKDHDLQRAVLNDLVSRWIMGHHPSQRRQALAMHVQAVRDLIELNEDALSDRKRGEAEDW
Ga0209734_10083681	3300027535	Forest Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVRDLIEL
Ga0208984_11294831	3300027546	Forest Soil	MGIFGRKVDDEFDTLIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRQALAIHVQAVRDLIELNEDALSDHKRGEPEDW
Ga0209106_11089521	3300027616	Forest Soil	MSIFGRKVDDDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELNEDALATRNRGEPEDW
Ga0208990_11024022	3300027663	Forest Soil	MSIFGRKVDDDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSSRRQALATHVQAVRDLIELN
Ga0209011_10058303	3300027678	Forest Soil	MGIFGRKVDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVRDLIELNEDALSNRKRGEPEDW
Ga0209328_101282722	3300027727	Forest Soil	MGIFGRKVDDDFDALIHAIGRLLHGKDHDLQRAVLNDLVSRWIMGHHPTQRRHALAIHVQAVRDLIELNEDAQSDRKRGEPEDW
Ga0209180_100505723	3300027846	Vadose Zone Soil	MSIFGRKVDDDFDALTNAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0209068_101570321	3300027894	Watersheds	MGIFGRKVDGDFDALMHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVRDLIELNEDAVTDRKRGEPEDW
Ga0209488_101967761	3300027903	Vadose Zone Soil	MSIFGRKVDDDFDSLTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEP
Ga0209488_106310101	3300027903	Vadose Zone Soil	MSIFRRKVDDDFDALTNAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEP
Ga0209583_100527852	3300027910	Watersheds	MSIFGRKVDDDFDALTNAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARKKGETEDW
Ga0209526_100223855	3300028047	Forest Soil	MGIFGRKGDDDFDALIHAIGRLLHGKGHDLQRAVLTDLVSRWIMGHHPSQRRHALAIHVQAVSDLIELNEDALSDRKRGEAEDW
Ga0137415_1001596312	3300028536	Vadose Zone Soil	MGIFGRKDDHDFDSLIHAIGPLLHGKGPDLQGAVLAHLVSAWIIGHHPSVRNHVLARHIQAVRDHVELHEDTLSVRKSGEPEDW
Ga0307504_104824052	3300028792	Soil	FGRKVDDDFDALINAIGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0307310_100225801	3300028824	Soil	VDDDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0311334_100545202	3300029987	Fen	MGIFGRRADHDFDALIHAIGSLLHGKGPDLQRAVLADLVSRWIVGHHPSVRAHLLTQHVQAVRDLIALKEEAMSARDRGEREDW
Ga0308198_10314392	3300030904	Soil	MSIFGRKVDDDFDALTNAIGRLLHGKGADLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0308197_104665192	3300031093	Soil	MGIFGRKVEDDFDALINAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0307501_100698191	3300031152	Soil	MSIFRRKVDDDFDALTNAMGRLLHGKGEDLQRAVLTDIVSRWIMGHHPSLRRQALATHVQAVRDLIELNEEALSARNRGEPEDW
Ga0308194_102463971	3300031421	Soil	MSIFGRKDDHDFDALIHAMGPLLRGKGPDLQGAVLAHLVSTWIIGHHPSWRDRVLARHVREVRDLIELNEEALSARKGGGKPEDW
Ga0307509_103162372	3300031507	Ectomycorrhiza	MNIFRRKVGDDYDALIEAIGPLLRGKGPDLQAAVLTELVSKWVIGHHRSVRASVLARHVQAVRDQIELNEEASVRGRDPEIW
Ga0307508_103203071	3300031616	Ectomycorrhiza	MSIFGRKDDHDFDALVHAMGPLLRGKGPDLQGAVLAHLVSTWIIGHHPSWRDRVLARHVREVRDLIELSEEAASTRKGGKPEDW
Ga0326726_101894452	3300033433	Peat Soil	MGIFGRKADHDFDALIHAIGPLLHGKGPDLQRAVLADLVARWIVGHRPSHRAHLLALHVQAVRDLIELKEEAQSARDGGEREDW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055459

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences