Metagenome / Metatranscriptome Family F055393

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055393
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	74 residues
Representative Sequence	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR
Number of Associated Samples	114
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.83 %
% of genes near scaffold ends (potentially truncated)	34.78 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.754 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.362 % of family members)
Environment Ontology (ENVO)	Unclassified (27.536 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.348 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.88% β-sheet: 23.38% Coil/Unstructured: 59.74%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF05163	DinB	14.49
PF01569	PAP2	8.70
PF13649	Methyltransf_25	6.52
PF09335	SNARE_assoc	4.35
PF07690	MFS_1	3.62
PF12847	Methyltransf_18	2.90
PF00156	Pribosyltran	2.17
PF13560	HTH_31	1.45
PF02861	Clp_N	1.45
PF08279	HTH_11	1.45
PF09339	HTH_IclR	0.72
PF00027	cNMP_binding	0.72
PF01266	DAO	0.72
PF00232	Glyco_hydro_1	0.72
PF14224	DUF4331	0.72
PF03640	Lipoprotein_15	0.72
PF13520	AA_permease_2	0.72
PF01872	RibD_C	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	14.49
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	4.35
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	4.35
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	4.35
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	1.45
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.72
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.72
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.72
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.75 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.75 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.75 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	74.64 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.77 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	53.62 %
Unclassified	root	N/A	7.25 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	48.55 %
Unclassified	root	N/A	7.25 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	48.55 %
Unclassified	root	N/A	7.25 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725000\|GPWRP_F5MPXY302IU17U	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100423868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300000890\|JGI11643J12802_11988179	Not Available	1843	Open in IMG/M
3300004114\|Ga0062593_103224467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300004463\|Ga0063356_100200677	All Organisms → cellular organisms → Bacteria	2352	Open in IMG/M
3300004480\|Ga0062592_101157977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300005162\|Ga0066814_10029006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300005166\|Ga0066674_10341733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300005167\|Ga0066672_10864186	Not Available	563	Open in IMG/M
3300005172\|Ga0066683_10211955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1197	Open in IMG/M
3300005174\|Ga0066680_10755781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300005177\|Ga0066690_10021708	All Organisms → cellular organisms → Bacteria	3588	Open in IMG/M
3300005180\|Ga0066685_10042107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2899	Open in IMG/M
3300005186\|Ga0066676_10450742	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300005186\|Ga0066676_11106380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300005330\|Ga0070690_100439077	All Organisms → cellular organisms → Bacteria → Terrabacteria group	966	Open in IMG/M
3300005406\|Ga0070703_10000008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	97684	Open in IMG/M
3300005438\|Ga0070701_11233983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300005440\|Ga0070705_100772442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300005444\|Ga0070694_100022891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4011	Open in IMG/M
3300005468\|Ga0070707_100736544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	949	Open in IMG/M
3300005536\|Ga0070697_100406024	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300005545\|Ga0070695_100529556	All Organisms → cellular organisms → Bacteria → Terrabacteria group	915	Open in IMG/M
3300005553\|Ga0066695_10019755	All Organisms → cellular organisms → Bacteria	3739	Open in IMG/M
3300005557\|Ga0066704_10164327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1493	Open in IMG/M
3300005586\|Ga0066691_10269373	Not Available	1002	Open in IMG/M
3300005617\|Ga0068859_103173762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300005719\|Ga0068861_100379257	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300006034\|Ga0066656_10840602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300009012\|Ga0066710_100157905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3166	Open in IMG/M
3300009012\|Ga0066710_100217754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2735	Open in IMG/M
3300009012\|Ga0066710_102046748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	846	Open in IMG/M
3300009012\|Ga0066710_103240979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300009012\|Ga0066710_103390062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300009137\|Ga0066709_100026043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6056	Open in IMG/M
3300009137\|Ga0066709_100045591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4878	Open in IMG/M
3300009137\|Ga0066709_100317738	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300009137\|Ga0066709_101074085	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300009148\|Ga0105243_10103376	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300010142\|Ga0127483_1057256	All Organisms → cellular organisms → Bacteria → Terrabacteria group	666	Open in IMG/M
3300010303\|Ga0134082_10098956	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300010333\|Ga0134080_10181820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	904	Open in IMG/M
3300010373\|Ga0134128_10433498	Not Available	1467	Open in IMG/M
3300010397\|Ga0134124_11554857	All Organisms → cellular organisms → Bacteria → Terrabacteria group	691	Open in IMG/M
3300012198\|Ga0137364_10112337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1932	Open in IMG/M
3300012198\|Ga0137364_10399975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1028	Open in IMG/M
3300012200\|Ga0137382_10070999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2231	Open in IMG/M
3300012200\|Ga0137382_10206789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1350	Open in IMG/M
3300012201\|Ga0137365_10223588	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300012201\|Ga0137365_11124515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300012206\|Ga0137380_10431964	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1166	Open in IMG/M
3300012206\|Ga0137380_10603415	All Organisms → cellular organisms → Bacteria → Terrabacteria group	960	Open in IMG/M
3300012207\|Ga0137381_10671834	All Organisms → cellular organisms → Bacteria → Terrabacteria group	901	Open in IMG/M
3300012207\|Ga0137381_11286856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300012208\|Ga0137376_10299881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1395	Open in IMG/M
3300012208\|Ga0137376_10315314	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300012211\|Ga0137377_10046033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4015	Open in IMG/M
3300012349\|Ga0137387_10531044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300012351\|Ga0137386_10461606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300012351\|Ga0137386_10602809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300012356\|Ga0137371_10177708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1669	Open in IMG/M
3300012356\|Ga0137371_10622364	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300012359\|Ga0137385_10905957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300012373\|Ga0134042_1209292	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012374\|Ga0134039_1198411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300012403\|Ga0134049_1182747	All Organisms → cellular organisms → Bacteria → Terrabacteria group	868	Open in IMG/M
3300012409\|Ga0134045_1411470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300012409\|Ga0134045_1482772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300012957\|Ga0164303_10305903	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300012957\|Ga0164303_11211122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300012960\|Ga0164301_10673125	All Organisms → cellular organisms → Bacteria → Terrabacteria group	775	Open in IMG/M
3300012986\|Ga0164304_10123904	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300012987\|Ga0164307_10670989	All Organisms → cellular organisms → Bacteria → Terrabacteria group	808	Open in IMG/M
3300012989\|Ga0164305_10366697	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300013297\|Ga0157378_10478446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1240	Open in IMG/M
3300014823\|Ga0120170_1013691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2492	Open in IMG/M
3300015077\|Ga0173483_10250308	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300015077\|Ga0173483_10332448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300015358\|Ga0134089_10170096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300017654\|Ga0134069_1192019	All Organisms → cellular organisms → Bacteria → Terrabacteria group	695	Open in IMG/M
3300018027\|Ga0184605_10001910	All Organisms → cellular organisms → Bacteria	6897	Open in IMG/M
3300018028\|Ga0184608_10007589	Not Available	3594	Open in IMG/M
3300018031\|Ga0184634_10412756	Not Available	614	Open in IMG/M
3300018051\|Ga0184620_10057999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M
3300018054\|Ga0184621_10063568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300018061\|Ga0184619_10045971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1887	Open in IMG/M
3300018067\|Ga0184611_1250997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300018071\|Ga0184618_10131556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300018431\|Ga0066655_10714167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300018433\|Ga0066667_10147976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1651	Open in IMG/M
3300018433\|Ga0066667_10286822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1271	Open in IMG/M
3300019867\|Ga0193704_1091004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300019875\|Ga0193701_1043114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300021073\|Ga0210378_10365545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300021080\|Ga0210382_10032286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1975	Open in IMG/M
3300021344\|Ga0193719_10174082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	924	Open in IMG/M
3300021418\|Ga0193695_1014306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1618	Open in IMG/M
3300021418\|Ga0193695_1087494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300025885\|Ga0207653_10000003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	268014	Open in IMG/M
3300025899\|Ga0207642_10464299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300025901\|Ga0207688_10524306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300025915\|Ga0207693_11105059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300025918\|Ga0207662_10233091	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300025922\|Ga0207646_11679969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300025922\|Ga0207646_11857597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300025933\|Ga0207706_10891822	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300025934\|Ga0207686_10185938	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300025938\|Ga0207704_11099876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300025961\|Ga0207712_11102034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300026118\|Ga0207675_101421998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300026324\|Ga0209470_1189169	Not Available	882	Open in IMG/M
3300026343\|Ga0209159_1026692	All Organisms → cellular organisms → Bacteria	3150	Open in IMG/M
3300026538\|Ga0209056_10548173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300027453\|Ga0207624_105868	All Organisms → cellular organisms → Bacteria → Terrabacteria group	679	Open in IMG/M
3300027458\|Ga0207602_105661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300028707\|Ga0307291_1091332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300028711\|Ga0307293_10274200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300028713\|Ga0307303_10115452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300028718\|Ga0307307_10004793	All Organisms → cellular organisms → Bacteria	3454	Open in IMG/M
3300028718\|Ga0307307_10217801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300028755\|Ga0307316_10375929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300028778\|Ga0307288_10090631	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1103	Open in IMG/M
3300028784\|Ga0307282_10442650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300028787\|Ga0307323_10034893	Not Available	1753	Open in IMG/M
3300028810\|Ga0307294_10004234	Not Available	3448	Open in IMG/M
3300028811\|Ga0307292_10096285	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300028819\|Ga0307296_10706200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300028872\|Ga0307314_10273663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300028878\|Ga0307278_10011991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4044	Open in IMG/M
3300028880\|Ga0307300_10004135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3666	Open in IMG/M
3300028881\|Ga0307277_10356839	All Organisms → cellular organisms → Bacteria → Terrabacteria group	651	Open in IMG/M
3300028884\|Ga0307308_10353854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300028884\|Ga0307308_10485319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300030990\|Ga0308178_1073640	All Organisms → cellular organisms → Bacteria → Terrabacteria group	682	Open in IMG/M
3300031421\|Ga0308194_10276801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300031474\|Ga0170818_104249559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300034681\|Ga0370546_086170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.30%
Host-Associated	Host-Associated	8.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.06%
Plants	Host-Associated → Plants	8.70%
Aquatic	Environmental → Aquatic	7.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.06%
Sediment	Environmental → Aquatic → Sediment	5.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.62%
Freshwater	Environmental → Aquatic → Freshwater	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.64%
Loam	Environmental → Terrestrial → Soil → Loam	9.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.45%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725000	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012374	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027453	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-D (SPAdes)	Environmental	Open in IMG/M
3300027458	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-B (SPAdes)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWRP_00237990	2067725000	Soil	HLGFALAPDIGEPVWEHRRGGTMRSDREGGVGESLEAREIRLSELADRKGYTLEKHGAGSPIETLDYSLVEKETFSIVVDSHDGLDRVEIFLADIP
INPhiseqgaiiFebDRAFT_1004238682	3300000364	Soil	MRRDREGDVDESLEAREARLSEWADRKGYTLEKHGAGSPITKFDYSLVDKETFSIVIDSHDGLDRVEVFLNDLPEDR*
JGI11643J12802_119881793	3300000890	Soil	DESLEAREARLSEWADRKGYTLEKHGAGSPITKFDYSLVDKETFSIVIDSHDGLDRVEVFLNDLPEDR*
Ga0062593_1032244671	3300004114	Soil	MRRDREGDVGESLEAREARLSKWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0063356_1002006773	3300004463	Arabidopsis Thaliana Rhizosphere	MRRDPEGDVDESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVDKETFSIVIDSHDGLDRVEVFLNDLPEDR*
Ga0062592_1011579772	3300004480	Soil	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVEKETFSIVIDSPDGLDRVEVFLSALPEDR*
Ga0066814_100290061	3300005162	Soil	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0066674_103417331	3300005166	Soil	MRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVE
Ga0066672_108641862	3300005167	Soil	LEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIAED*
Ga0066683_102119551	3300005172	Soil	MSESLEAREVRVSELADRKGFTLEKHGAGSPIMSLEYSLVEKETFSIVVDGHDGLDPVEIFLADIPED*
Ga0066680_107557811	3300005174	Soil	MGESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIPED*
Ga0066690_100217083	3300005177	Soil	MAESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIAED*
Ga0066685_100421072	3300005180	Soil	MRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVGDSHDGLDRVEVFLTDLPEDRSP*
Ga0066676_104507422	3300005186	Soil	MRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDLPEDRSP*
Ga0066676_111063802	3300005186	Soil	MGETLEAREARLSELADRKGYTLEKHGAGSPITTLDYSLVNKETFSIVVDSHDGLDRVEVFLTEIPDD*
Ga0070690_1004390772	3300005330	Switchgrass Rhizosphere	MRTDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTGLPEDR*
Ga0070703_1000000846	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPRDREGGVEESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIPED*
Ga0070701_112339831	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTGLPEDR*
Ga0070705_1007724421	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRDREGDVDESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0070694_1000228912	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVDKETFSIVIDSHDGLDRVEVFLSDLPEDR*
Ga0070707_1007365442	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0070697_1004060242	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGESLEAREVRVSELADRKGFTLEKLGAGSPITSLEYSLVDKERFSIVIDGHYGLDPVEVFLADIPED*
Ga0070695_1005295561	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	REGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVDKETFSIVIDSHDGLDRVEVFLSDLPEDR*
Ga0066695_100197555	3300005553	Soil	MRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFL
Ga0066704_101643272	3300005557	Soil	MGESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIAED*
Ga0066691_102693732	3300005586	Soil	REGGMGESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIPED*
Ga0068859_1031737621	3300005617	Switchgrass Rhizosphere	TLPGLAGHVRASLGTSLRRGTMPRDREGGVEESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIPED*
Ga0068861_1003792572	3300005719	Switchgrass Rhizosphere	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLSDLPEDR*
Ga0066656_108406021	3300006034	Soil	MPRDREGGVGESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVIDSHDGLDRVEVFLTDIAEDRAPD*
Ga0066710_1001579053	3300009012	Grasslands Soil	MGESLEAREKRLSEMADRKGFTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVEVFLNDIPED
Ga0066710_1002177542	3300009012	Grasslands Soil	MGETLEAREARLSELADRKGYTLEKHGAGSPITTLDYSLVNKETFSIVVDSHDGLDRVEVFLTEIPDD
Ga0066710_1020467481	3300009012	Grasslands Soil	MGESVEAREVRVSELADRKGFTLEKHGAGSPITSLEYSLVDKETFSIVIDGHDGLDPVEVFLADIPED
Ga0066710_1032409792	3300009012	Grasslands Soil	MSESLEAREVRVSELADRKGFTLEKHGAGSPIMSLEYSLVEKETFSIVVDGHDGLDPVEIFLAVIPEA
Ga0066710_1033900622	3300009012	Grasslands Soil	MGESVEAREVRLSEEADRKGFTLERHGAGSPITTLDYSLVEKETFSIVVDSHDGLDAVDV
Ga0066709_1000260438	3300009137	Grasslands Soil	MGESLEAREKRLSEIADRKGFTLEKHGAGSPITTLDYSLVENETFSIVVDSHDGLDRVEVFLNDIAED*
Ga0066709_1000455913	3300009137	Grasslands Soil	MGESLEAREKRLSEMADRKGFTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVEVFLNDIPED*
Ga0066709_1003177382	3300009137	Grasslands Soil	MGESVEAREVRLSEEADRKGFTLERHGAGSPITTLDYSLVEKETFSIVVDSHDGLDAVDVFLTDIADD*
Ga0066709_1010740852	3300009137	Grasslands Soil	MGESVEAREVRVSELADRKGFTLEKHGAGSPITSLEYSLVDKETFSIVIDGHDGLDPVEVFLADIPED*
Ga0105243_101033762	3300009148	Miscanthus Rhizosphere	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0127483_10572562	3300010142	Grasslands Soil	SDRQGGVGESLEERDIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDLPEDRSP*
Ga0134082_100989562	3300010303	Grasslands Soil	MRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVFDSHDGLDRVEVFLTDLPEDRSP*
Ga0134080_101818201	3300010333	Grasslands Soil	PDIEEPVWEHQRGGTMRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDLPEDRSP*
Ga0134128_104334982	3300010373	Terrestrial Soil	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKEMFSIVIDSHDGLDRVEVFLTGLPEDR*
Ga0134124_115548571	3300010397	Terrestrial Soil	EGDVDESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLSDLPEDR*
Ga0137364_101123373	3300012198	Vadose Zone Soil	MGESLEAREKRLSEIADRKGFTLEKHGAGSPITTLDYSLVENETFSIVVDSHDGLDRVEVFLNDIAEDSSPQPIKRF*
Ga0137364_103999752	3300012198	Vadose Zone Soil	MPRDREGGVGESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIPEDRAPD*
Ga0137382_100709992	3300012200	Vadose Zone Soil	MGESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVENETFSIVVDSHDGLDRVEVFLNDIAED*
Ga0137382_102067893	3300012200	Vadose Zone Soil	VWEHRHGGTMRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0137365_102235883	3300012201	Vadose Zone Soil	VGESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIPED*
Ga0137365_111245152	3300012201	Vadose Zone Soil	MGESLEAREVRVSELADRKGFTLEKHGAGSPITSLEYSLVDKETFSIVIDGHDGLDPVEVFLADIPED*
Ga0137380_104319642	3300012206	Vadose Zone Soil	MGESVEAREVRVSELADRKGFTLEKHGAGSPITSLEYSLVDKETFSIVIDGHDGLDPVEVFLGDIPED*
Ga0137380_106034152	3300012206	Vadose Zone Soil	MPRDREGGVGESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLADIPED*
Ga0137381_106718342	3300012207	Vadose Zone Soil	MGESLEAREKRLSDMADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIPED*
Ga0137381_112868562	3300012207	Vadose Zone Soil	MGESLEAREVRVSELADRKGFTLEKHGAGSPITSLEYSLVEKETFSIVVDGHDGLDPVEIFLADIPEA*
Ga0137376_102998812	3300012208	Vadose Zone Soil	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0137376_103153142	3300012208	Vadose Zone Soil	MPRDREGGVGESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIPED*
Ga0137377_100460333	3300012211	Vadose Zone Soil	MGESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVENETFSIVVDSHDGLDRVEVFLTDIPED*
Ga0137387_105310442	3300012349	Vadose Zone Soil	MGESVEAREVRVSELADRKGFTLEKHGAGSPITSLQYSLVDKETFSIVIDGHDGLDPVEVFLADIPED*
Ga0137386_104616062	3300012351	Vadose Zone Soil	MQRDREGGVGESLEAREIRLSELADRKGYTLEKHGAGSPIGILDYSLVEKETFSIVVDSHDGLDRVEVFLADIPED*
Ga0137386_106028091	3300012351	Vadose Zone Soil	MGESVEAREVRVSELADRKGFTLEKHGAGSPITSLEYSLVDKETFSIVIDGHDGLDPVEVFLADIPEG*
Ga0137371_101777084	3300012356	Vadose Zone Soil	MSESLEAREVRVSELADRKGFTLEKHGAGSPITSLEYSLVEKETFSIVVDGHDGLDPVEIFLADIPED*
Ga0137371_106223642	3300012356	Vadose Zone Soil	MPRGREGGVGESLEAREKRLSDMADRKGYTLEKHGAGSPIGTLDYSLVENETFSIVVDSHDGLDRVEVFLTDLAED*
Ga0137385_109059572	3300012359	Vadose Zone Soil	MGESVEAREVRVSQLADRKGFTLEKHGAGSPITSLEYSLVDKETFSIVIDGHDGLDPVEVFLADIPED*
Ga0134042_12092922	3300012373	Grasslands Soil	ALAPDIEEPVWEHRRGGTMRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDLPEDRSP*
Ga0134039_11984113	3300012374	Grasslands Soil	DREGGMGESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIAED*
Ga0134049_11827471	3300012403	Grasslands Soil	RSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDLPEDRSP*
Ga0134045_14114701	3300012409	Grasslands Soil	GDMGETLEAREARLSELADRKGYTLEKHGAGSPITTLDYSLVNKETFSIVVDSHDGLDRVEVFLTEIPDD*
Ga0134045_14827721	3300012409	Grasslands Soil	EETVWEHRRGGTMRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDLPEDRSP*
Ga0164303_103059032	3300012957	Soil	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITSYDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0164303_112111221	3300012957	Soil	MRRDREGDVGESLEAREARLSAWADRKGYTLEKHGAGSPITTYDYSLVEKETFAIVIDSHDGLDR
Ga0164301_106731252	3300012960	Soil	GNIAPEGSMRKDREGDVGESLEAREARVSAWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0164309_101072091	3300012984	Soil	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDG
Ga0164304_101239042	3300012986	Soil	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDL*
Ga0164307_106709892	3300012987	Soil	ENIALEGSMRRDREGGVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0164305_103666973	3300012989	Soil	MRRDREGDVGESLEAREARLSAWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0157378_104784461	3300013297	Miscanthus Rhizosphere	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVF
Ga0120170_10136913	3300014823	Permafrost	MGESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVE
Ga0173483_102503082	3300015077	Soil	MMRRDREGDVGESLEAREARLSKWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSPDGL
Ga0173483_103324481	3300015077	Soil	MEETLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVEKETFSIVIDSPDGLDRVEVFLSALPEDR*
Ga0134089_101700961	3300015358	Grasslands Soil	MRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR*
Ga0134069_11920191	3300017654	Grasslands Soil	GGVGESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDLPEDRSP
Ga0184605_100019102	3300018027	Groundwater Sediment	MEGTIRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLNDLPEDR
Ga0184608_100075893	3300018028	Groundwater Sediment	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLKDLPEDR
Ga0184634_104127561	3300018031	Groundwater Sediment	QCGVTGRVDVSESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0184620_100579991	3300018051	Groundwater Sediment	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLNDLPEDR
Ga0184621_100635682	3300018054	Groundwater Sediment	MEGTMRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLNDLPEDR
Ga0184619_100459712	3300018061	Groundwater Sediment	VGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLNDLPEDR
Ga0184611_12509972	3300018067	Groundwater Sediment	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLSDLPEDR
Ga0184618_101315562	3300018071	Groundwater Sediment	MGESLEAREKRLSDIADRKGYTLEKHGAGSPITTLDYSLVENETFSIVVDSHDGLDRVEVFLADIAQD
Ga0066655_107141672	3300018431	Grasslands Soil	MRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDLPEDRSP
Ga0066667_101479762	3300018433	Grasslands Soil	MGESLEAREKRLSEIADRKGFTLEKHGAGSPITTLDYSLVENETFSIVVDSHDGLDRVEVFLNDIAED
Ga0066667_102868221	3300018433	Grasslands Soil	MAESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIAED
Ga0193704_10910041	3300019867	Soil	MEGTIRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLKDLPEDR
Ga0193701_10431142	3300019875	Soil	MEGTIRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0210378_103655451	3300021073	Groundwater Sediment	VGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLND
Ga0210382_100322863	3300021080	Groundwater Sediment	MSGNIAAEGTMRSDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0193719_101740822	3300021344	Soil	MGESLEAREARLSEWADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0193695_10143062	3300021418	Soil	MGESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVENETFSIVVDSHDGLDRVEVFLTDIAED
Ga0193695_10874941	3300021418	Soil	MRSDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0207653_1000000353	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPRDREGGVEESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIPED
Ga0207642_104642991	3300025899	Miscanthus Rhizosphere	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTGLPEDR
Ga0207688_105243062	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRRDREGDVDESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLSDLPEDR
Ga0207693_111050591	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPRDREGGVEESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRV
Ga0207662_102330912	3300025918	Switchgrass Rhizosphere	VGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0207646_116799691	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	REGGVAESLEAREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDIPED
Ga0207646_118575971	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVEKETFSIVIDSHDGLDR
Ga0207706_108918222	3300025933	Corn Rhizosphere	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVDKETFSIVIDSHDGLDRVEVFLTGLPEDR
Ga0207686_101859382	3300025934	Miscanthus Rhizosphere	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0207704_110998761	3300025938	Miscanthus Rhizosphere	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFL
Ga0207712_111020342	3300025961	Switchgrass Rhizosphere	MRRDREGDVDESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLTGLPEDR
Ga0207675_1014219982	3300026118	Switchgrass Rhizosphere	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVEKETFSIVIDSHDGLDRVEVFLSDLPEDR
Ga0209470_11891691	3300026324	Soil	EREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDLPEDRSP
Ga0209159_10266921	3300026343	Soil	MRSDRQGGVGESLEEREIRLSELADRKGYTLEKHGAGSPIGTLDYSLVEKETFSIVVDSHDGLDRVEVFLTDLPEDRSRRPRRGPAHHG
Ga0209056_105481731	3300026538	Soil	MAESLEAREKRLSDMADRKGYTLEKHGAGSPITTLDYSLVEKETFSIVVDSHDGLDRVEVFLTD
Ga0207624_1058681	3300027453	Soil	MRRDPEGDVDESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVDKETFSIVIDSHDGLDRVEVFLNDLPEDR
Ga0207602_1056611	3300027458	Soil	MRRDPEGDVDESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVDKETFSIVIDSHDGLDRVEVFL
Ga0307291_10913322	3300028707	Soil	VSESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0307293_102742002	3300028711	Soil	VDPEHVPAGEDRSDQSREGESGMGESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0307303_101154522	3300028713	Soil	VSESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLTD
Ga0307307_100047934	3300028718	Soil	MGESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0307307_102178012	3300028718	Soil	VGESLDAREVRVSELAERSGFTLEKHGAGSPITSLEYSLIDKETFSIVVDGHDGLDSIEI
Ga0307316_103759292	3300028755	Soil	TSLRRDQCGVTGRVDVSESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0307288_100906312	3300028778	Soil	VSESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLNDLPEDR
Ga0307282_104426501	3300028784	Soil	MRRTIRRDREGGVGESLEAREARLSKLADRKGFTLEKHGAGSPITTFDYSLVDQETFSIVVDSHDGLDRIEVFLTDITED
Ga0307323_100348932	3300028787	Soil	VLAGEDGFGSFREGEGGMEETLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVEKETFSIVIDSPDGLDRVEVFLSALPEDR
Ga0307294_100042342	3300028810	Soil	VGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0307292_100962853	3300028811	Soil	VSESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPE
Ga0307296_107062002	3300028819	Soil	VGESLDAREVRVSELAERSGFTLEKHGAGSPITSLEYSLVDKETFSIVVDGHDGLDPIEIFLTDIPKDHGRPAKRLGK
Ga0307314_102736631	3300028872	Soil	VLAGEDGFGSFREGEGGMEETLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVEKETFSIVIDSPDGLDRVEV
Ga0307278_100119916	3300028878	Soil	MGEMGESLDAREVRVSELADSRGFTLEKHGAGSPITSLEYSLVDKETFSIVVDGHDGLDPIEIFLTDIPKDHGRPAKRLGK
Ga0307300_100041351	3300028880	Soil	MEGTIRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLKDLPED
Ga0307277_103568392	3300028881	Soil	RDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLNDLPEDR
Ga0307308_103538542	3300028884	Soil	MRRDREGDVGESLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVEKETFSIVIDSHDG
Ga0307308_104853192	3300028884	Soil	VGESLDAREVRVSELAERSGFTLEKHGAGSPITSLEYSLIDKETFSIVVDGHDGLDSIEIFLTDIPKDHGRGAKRPGK
Ga0308178_10736401	3300030990	Soil	ADPERVLAGEDGFGSFREGEGGMEETLEAREARLSEWADRKGYTLEKHGAGSPITTYDYSLVDKETFSIVIDSHDGLDRVEVFLTDLPEDR
Ga0308194_102768011	3300031421	Soil	KGPEGGVGESLEAREARLSKLADRKGFTLEKHGAGSPITTFDYSLVDQETFSIVVDSHDGLDRIEVFLTDITED
Ga0170818_1042495591	3300031474	Forest Soil	GGMAESQEAREVRLSELADRKGYTLEKHGAGSPIRSFGYSLVDKETFSIVVDSHDGLDRVEVFLTHDGEG
Ga0370546_086170_2_247	3300034681	Soil	DGFGSFREGEGGMEETLEAREARLSEWADRKGYTLEKHGAGSPITTFDYSLVEKETFSIVIDSPDGLDRVEVFLSALPEDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055393

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences