Metagenome / Metatranscriptome Family F054841

Basic Information
Family ID	F054841
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	94 residues
Representative Sequence	MQIQVTNIHRRSNGTVDTDVYRRKAFLLRRETTNQILRRLGRSVLPQLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ
Number of Associated Samples	114
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.10 %
% of genes near scaffold ends (potentially truncated)	32.37 %
% of genes from short scaffolds (< 2000 bps)	75.54 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Most Common Taxonomy
Group	Bacteria (86.331 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.633 % of family members)
Environment Ontology (ENVO)	Unclassified (28.777 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.043 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.40% β-sheet: 0.00% Coil/Unstructured: 65.60%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF11937	DUF3455	42.45
PF07298	NnrU	12.23
PF02913	FAD-oxidase_C	3.60
PF00486	Trans_reg_C	2.88
PF02826	2-Hacid_dh_C	2.88
PF13361	UvrD_C	0.72
PF01565	FAD_binding_4	0.72
PF12221	HflK_N	0.72
PF00389	2-Hacid_dh	0.72
PF11737	DUF3300	0.72
PF13561	adh_short_C2	0.72
PF12697	Abhydrolase_6	0.72
PF04386	SspB	0.72
PF12974	Phosphonate-bd	0.72
PF01699	Na_Ca_ex	0.72
PF09084	NMT1	0.72
PF13467	RHH_4	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG4094	Uncharacterized membrane protein	Function unknown [S]	12.23
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	3.60
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.72
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.72
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.72
COG2969	Stringent starvation protein B, binds SsrA peptide	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.33 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.33 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.33 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.17 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.17 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	39.57 %
Unclassified	root	N/A	13.67 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	20.86 %
Unclassified	root	N/A	13.67 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.72 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	18.71 %
Unclassified	root	N/A	13.67 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.67 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.44 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.67 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.44 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886011\|MRS1b_contig_146718	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
2170459015\|G14TP7Y02HSLXC	Not Available	692	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0687298	Not Available	505	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0687327	Not Available	504	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104896775	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300000890\|JGI11643J12802_10770658	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300002117\|JGI24233J26641_100687	Not Available	515	Open in IMG/M
3300002155\|JGI24033J26618_1000207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7000	Open in IMG/M
3300003371\|JGI26145J50221_1016561	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300003371\|JGI26145J50221_1030031	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300004024\|Ga0055436_10286740	Not Available	531	Open in IMG/M
3300004114\|Ga0062593_100722294	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300004114\|Ga0062593_103310462	Not Available	517	Open in IMG/M
3300004156\|Ga0062589_100187724	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300004156\|Ga0062589_100915582	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300004463\|Ga0063356_103539636	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300004480\|Ga0062592_102553464	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300004643\|Ga0062591_100212157	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300005093\|Ga0062594_100480677	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300005103\|Ga0066813_1003761	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300005103\|Ga0066813_1005112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	676	Open in IMG/M
3300005168\|Ga0066809_10084743	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005183\|Ga0068993_10074070	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005218\|Ga0068996_10036600	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005290\|Ga0065712_10000757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8523	Open in IMG/M
3300005328\|Ga0070676_10008970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5409	Open in IMG/M
3300005330\|Ga0070690_100227821	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300005332\|Ga0066388_100596429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1728	Open in IMG/M
3300005332\|Ga0066388_102257242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	984	Open in IMG/M
3300005332\|Ga0066388_105099971	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005338\|Ga0068868_100002681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12350	Open in IMG/M
3300005340\|Ga0070689_100007095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7804	Open in IMG/M
3300005340\|Ga0070689_100010750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6536	Open in IMG/M
3300005347\|Ga0070668_101092082	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300005365\|Ga0070688_100244598	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300005444\|Ga0070694_100836095	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005455\|Ga0070663_101734214	Not Available	559	Open in IMG/M
3300005458\|Ga0070681_10684929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	941	Open in IMG/M
3300005467\|Ga0070706_101622162	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005467\|Ga0070706_101968638	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005518\|Ga0070699_100142813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2115	Open in IMG/M
3300005535\|Ga0070684_101489193	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005547\|Ga0070693_100001926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9497	Open in IMG/M
3300005563\|Ga0068855_100010931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10955	Open in IMG/M
3300005614\|Ga0068856_100704848	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300005713\|Ga0066905_100360896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1164	Open in IMG/M
3300005937\|Ga0081455_10000185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	78750	Open in IMG/M
3300006572\|Ga0074051_11345432	Not Available	505	Open in IMG/M
3300006573\|Ga0074055_11850742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	960	Open in IMG/M
3300006575\|Ga0074053_11948077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	942	Open in IMG/M
3300006755\|Ga0079222_10495111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	893	Open in IMG/M
3300006847\|Ga0075431_101688176	Not Available	590	Open in IMG/M
3300006852\|Ga0075433_11812498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	524	Open in IMG/M
3300006903\|Ga0075426_10174446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1555	Open in IMG/M
3300006953\|Ga0074063_13762651	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300006954\|Ga0079219_10347666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	950	Open in IMG/M
3300007076\|Ga0075435_101005164	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300007076\|Ga0075435_101123128	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300009093\|Ga0105240_10027358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7465	Open in IMG/M
3300009094\|Ga0111539_10383971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1635	Open in IMG/M
3300009156\|Ga0111538_10942826	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300010046\|Ga0126384_10807936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	840	Open in IMG/M
3300010047\|Ga0126382_10005375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5766	Open in IMG/M
3300010047\|Ga0126382_12213066	Not Available	529	Open in IMG/M
3300010362\|Ga0126377_10002409	All Organisms → cellular organisms → Bacteria	12869	Open in IMG/M
3300010362\|Ga0126377_10091527	All Organisms → cellular organisms → Bacteria	2754	Open in IMG/M
3300010371\|Ga0134125_10639050	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300010371\|Ga0134125_10901420	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300010371\|Ga0134125_11031721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	901	Open in IMG/M
3300010371\|Ga0134125_12143439	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300010396\|Ga0134126_10425768	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300010396\|Ga0134126_10575475	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300012883\|Ga0157281_1013758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	942	Open in IMG/M
3300012893\|Ga0157284_10219654	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012900\|Ga0157292_10105336	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300012906\|Ga0157295_10110424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	769	Open in IMG/M
3300012912\|Ga0157306_10191684	Not Available	680	Open in IMG/M
3300012948\|Ga0126375_10091901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1770	Open in IMG/M
3300012948\|Ga0126375_11644904	Not Available	555	Open in IMG/M
3300012955\|Ga0164298_10001163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7886	Open in IMG/M
3300012989\|Ga0164305_10809954	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300013100\|Ga0157373_10050390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2965	Open in IMG/M
3300013100\|Ga0157373_11195639	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300014745\|Ga0157377_10843067	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300015077\|Ga0173483_10409007	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300015371\|Ga0132258_11054634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2055	Open in IMG/M
3300015371\|Ga0132258_11760449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1562	Open in IMG/M
3300015371\|Ga0132258_11928423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1487	Open in IMG/M
3300015372\|Ga0132256_100011817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7579	Open in IMG/M
3300015372\|Ga0132256_100460862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1379	Open in IMG/M
3300015374\|Ga0132255_102558221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	780	Open in IMG/M
3300019356\|Ga0173481_10001527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5621	Open in IMG/M
3300019356\|Ga0173481_10013542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2358	Open in IMG/M
3300019361\|Ga0173482_10001060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5318	Open in IMG/M
3300021560\|Ga0126371_11799529	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300022737\|Ga0247747_1000130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8150	Open in IMG/M
3300025911\|Ga0207654_10880333	Not Available	649	Open in IMG/M
3300025921\|Ga0207652_11215493	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300025923\|Ga0207681_10000131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	61025	Open in IMG/M
3300025924\|Ga0207694_10245951	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300025927\|Ga0207687_10000090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	66310	Open in IMG/M
3300025931\|Ga0207644_10166462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1718	Open in IMG/M
3300025932\|Ga0207690_10441994	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300025972\|Ga0207668_11777075	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300025986\|Ga0207658_10005690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8523	Open in IMG/M
3300026023\|Ga0207677_10023458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3813	Open in IMG/M
3300026035\|Ga0207703_10818473	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300026067\|Ga0207678_10660453	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300026075\|Ga0207708_11205897	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300026078\|Ga0207702_10571261	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300026452\|Ga0256821_1006650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1096	Open in IMG/M
3300026745\|Ga0207576_104149	Not Available	505	Open in IMG/M
3300026779\|Ga0207471_100102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1774	Open in IMG/M
3300027122\|Ga0207538_1004231	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300027360\|Ga0209969_1079903	Not Available	523	Open in IMG/M
3300027401\|Ga0208637_1016403	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300027543\|Ga0209999_1081536	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300027552\|Ga0209982_1003003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2382	Open in IMG/M
3300027560\|Ga0207981_1060533	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300027617\|Ga0210002_1002250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2789	Open in IMG/M
3300027617\|Ga0210002_1048399	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300027695\|Ga0209966_1117263	Not Available	609	Open in IMG/M
3300027717\|Ga0209998_10083303	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300027876\|Ga0209974_10097448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1025	Open in IMG/M
3300027907\|Ga0207428_10293790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1203	Open in IMG/M
3300027993\|Ga0247749_1000107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5747	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1000301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7287	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1010013	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10000019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	28392	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1057945	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300031547\|Ga0310887_10181370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1130	Open in IMG/M
3300031716\|Ga0310813_10062321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2786	Open in IMG/M
3300031720\|Ga0307469_12168336	Not Available	541	Open in IMG/M
3300031740\|Ga0307468_100436545	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300032075\|Ga0310890_11519883	Not Available	552	Open in IMG/M
3300032174\|Ga0307470_10012665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3558	Open in IMG/M
3300032180\|Ga0307471_100143388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2281	Open in IMG/M
3300032180\|Ga0307471_103880776	Not Available	529	Open in IMG/M
3300032205\|Ga0307472_100629843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	952	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.59%
Host-Associated	Host-Associated	36.69%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.71%
Plants	Host-Associated → Plants	36.69%
Aquatic	Environmental → Aquatic	2.88%
Solid Waste	Engineered → Solid Waste	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.99%
Marine	Environmental → Aquatic → Marine	2.16%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Grass	Engineered → Solid Waste → Grass	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.67%
Loam	Environmental → Terrestrial → Soil → Loam	12.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.32%
Sand	Environmental → Terrestrial → Soil → Sand	2.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Composting	Engineered → Solid Waste → Grass → Composting	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.16%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	7.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.88%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.16%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002117	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-10	Environmental	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental	Open in IMG/M
3300026745	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08K1-12 (SPAdes)	Environmental	Open in IMG/M
3300026779	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2w-11 (SPAdes)	Environmental	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS1b_0574.00000140	2162886011	Miscanthus Rhizosphere	MQSQVTNIHRRSNGNVDADVYRRKAFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGSTFAPAKMSLLPDALRAPKLNHRSQ
4PV_04011530	2170459015	Switchgrass, Maize And Mischanthus Litter	DTDVYRQRAFLLRRETKNQILRRLGRSARPLIGAIAILVSYALLLPRTPMPQGAASMLAPAKVSPLFDSLRTQKLNHRSQ
ICChiseqgaiiDRAFT_06872982	3300000033	Soil	MQSQVINIHRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLRRNPLPQGAGSTFVPAKVSLLPDSLRTPKSNHRSQ
ICChiseqgaiiDRAFT_06873272	3300000033	Soil	MQLQVTNIHRRSNGTXDXDVYRRXAFLLRRETTNQILRRLGRSARPLLCAIATLMSYALLLPRNPVPQGANLMLAPAKVSPLSDSLRTPKSNHRSQ*
INPhiseqgaiiFebDRAFT_1048967752	3300000364	Soil	MRIQVTNFHRRSNGTVDMDVYRRKAFLLRRETTNQILHRFGRIFRTLIGTVAILVSYALSMRNPVPQGASKLAPAKVSPRSNSLRTSRLNHRSQ*
JGI11643J12802_107706581	3300000890	Soil	DTNVYRRKAFLLRRETTNQILRRLGRSARPLLCAIATLMSYALLLPRNPVPQGANLMLAPAKVSPLSDSLRTPKSNHRSQ*
JGI24233J26641_1006871	3300002117	Soil	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAK
JGI24033J26618_10002078	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGXSVLXRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
JGI26145J50221_10165611	3300003371	Arabidopsis Thaliana Rhizosphere	MRLQVTNIHRRSNGTIDTDVYRRKAFLLRRETTNQILRRLGRSARPLLCAIATLMSYALLLPRNPVPQGANLMLAPAKVSPLSDSLRTPKSNHRSQ*
JGI26145J50221_10300311	3300003371	Arabidopsis Thaliana Rhizosphere	DVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0055436_102867402	3300004024	Natural And Restored Wetlands	VQLQVTNIHRRNNGTIDTEVYRLKASLMRREITNQMLRRLGHIVRPLIGAIAIPLSYALLLSRNPGRQCAASKFTPKVSPLSDSLRTPKLNHRSQ*
Ga0062593_1007222942	3300004114	Soil	MQLQVANIHRRSNGTIDTDVYRRRAFLLRRETTNQILRRLGRSTRPLIGAIAILVSYALLLPRNPIPQGAASMLAPAKVSPLSGSLRTQKSNHRSQ*
Ga0062593_1033104621	3300004114	Soil	TVDMDVYRRKAFLLRRETTKQILRWFGRSVLPRLIGAIAILVSYILLLPRNRLPQGACSTFAPAKVSLLPGPLRTPKPNHRSQ*
Ga0062589_1001877243	3300004156	Soil	MQSQVINIHRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLRRNPLPQGAGSTFVPAKVSLLPDSLRTPKSNHRSQ*
Ga0062589_1009155822	3300004156	Soil	MQLQVTNIHRRSNGTIDTEVYRRKAFLMRRETMNQMLRRLGHIVRPVIGAIAIPVSYALLLSRNPGRQGAASKFTPKVSPLSGSLRTPKLNHRSQ*
Ga0063356_1035396361	3300004463	Arabidopsis Thaliana Rhizosphere	MQLQVTNIHRRSNGTIDTDVYRQRAFLLRRETKNQILRRLGRSARPLIGAIAILVSYALLLPRTPMPQGAASMLAPAKVSPLFDSLRTQKLNHRSQ*
Ga0062592_1025534642	3300004480	Soil	VDMDVYRRKAFLLRRETTKQILRWFGRSVLPRLIGAIAILVSYILLLPRNRLPQGACSTFAPAKVSLLPGPLRTPKPNHRSQ*
Ga0062591_1002121573	3300004643	Soil	MQSQVTNIHRRSNGNVDADVYRRKAFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGSTFAPAKMSLLPDALRAPKLNHRSQ*
Ga0062594_1004806772	3300005093	Soil	MQIRDTNIHCRSNGTADTDVYRQRAFMLRREATNQILRRLGRSVMPRLIGAIAILVSYVLFLQRNPLPQGAGPTFAPAKVSLLSDSRKASKWDHRSQ*
Ga0066813_10037612	3300005103	Soil	TVDMDVYRRKAFLLRRETANRILRRLGRSARPLLGAIAILVSYALLLPRNPLPQGAASMLAPAKVSPLSDSLRTPKSNHRSQ*
Ga0066813_10051122	3300005103	Soil	MQIQVTNIHRRSNGTVDMDVYRRKAFLLRRETTNRILRRLGRSVLPRLIGPVAILVSYVLFLPRNPLPQGAGSTFAPAKVSLLPDSLKTSKWNHRSQ*
Ga0066809_100847432	3300005168	Soil	LTAAVIQSEDAMQLQVTNIHRRSNGTVDTDVYRRKAFLLRRETTNRILRRLGRSVLPRQIGPVAILVSYVLFLPRNPLPQGAGSTFAPAKVSLLPDSLKTSKWNHRSQ*
Ga0068993_100740702	3300005183	Natural And Restored Wetlands	IIQSEDAVQLQVTNIHRRNTGTIDTEVYRLKASLMRREITNQMLRRLIGAIAIPLSYALLLSRNPGRQCAASKFTPKVSPLSDSLRTPKLNHRSQ*
Ga0068996_100366002	3300005218	Natural And Restored Wetlands	TAAVIIQSEDAIQLQVTNIHRRSNGTIDTEVYRRKAFLMRRETTNQMLRWLGHIVRPLVGAIAILLSYALLLSRNPGRQGAASKFTPKVSPLSGLLRTAKLNHRSQ*
Ga0065712_1000075710	3300005290	Miscanthus Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0070676_100089704	3300005328	Miscanthus Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0070690_1002278211	3300005330	Switchgrass Rhizosphere	MQSQVTNIHRRSNGNVDADVYRRKTFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGSTFAPAKMSLLPDALRAPKLNHRSQ*
Ga0066388_1005964293	3300005332	Tropical Forest Soil	MRIQVTNIQRRSNGTVDVDVYRREAFLLRRESTNQILRRLGRFVRPYIGAIAIVISSALVLPAAEGAVSKLAQAKVSSLSNSLRTFKLNHLSQ*
Ga0066388_1022572422	3300005332	Tropical Forest Soil	MRIQVTNIHRRSNGTVDMDVYRRKAFLLRREITNQILRRLGRSAWPLIGVIAIVISSTLVLPVAEEAASKLGQAKVSSLSLSLKTFKSDQPNQ*
Ga0066388_1050999711	3300005332	Tropical Forest Soil	MRIRDTNIHRRSNGTVDMDVYRREAFLLRRETTNRILRRLGRFVRPYVGAIAIVISSALLLPAAEGAVSKLAQSKVSSLSDSL
Ga0068868_1000026816	3300005338	Miscanthus Rhizosphere	MQIQVTNIHRRSNGTVDTDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0070689_1000070951	3300005340	Switchgrass Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLP
Ga0070689_1000107505	3300005340	Switchgrass Rhizosphere	IQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0070668_1010920821	3300005347	Switchgrass Rhizosphere	DTDVYRRRAFLLRRETTNQILRRLGRSTRPLIGAIAILVSYALLLPRNPIPQGAASMLAPAKVSPLSGSLRTQKSNHRSQ*
Ga0070688_1002445981	3300005365	Switchgrass Rhizosphere	MQSQVTNIHRRSNGNVDADVYRRKAFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGPTFAPAKMSLLPDALRAPKLNHRSQ*
Ga0070694_1008360951	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	QVANIHRRSNGTIDTDVYRRRAFLLRRETTNQILRRLGRSTRPLIGAIAILVSYALLLPRNPIPQGAASMLAPAKVSPLSGSLRTQKSNHRSQ*
Ga0070663_1017342141	3300005455	Corn Rhizosphere	MQSQVTNIHRRSNGNVDADVYRRKTFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGPTFAPAKMSLLPDALRAPKLNHRSQ*
Ga0070681_106849292	3300005458	Corn Rhizosphere	MQIQVTKIHRRSNGTVDMDVYRRKAFLLRRETTKQILRWFGRSVLPRLIGAIAILVSYILLLPRNRLPQGACSTFAPAKVSLLPGPLRTPKPNHRSQ*
Ga0070706_1016221622	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAK
Ga0070706_1019686382	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RRSNGTVDMDVYRWKAFLLRRETTNQILRRLGRSARSLLGAITTFASHAPLLPRNPVPQGATSMLAPAKASPLSGSLRTPKSNHRSQ*
Ga0070699_1001428132	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MQLQVTNIHRRSNGTVDMDVYRWKAFLLRRETTNQILRRLGRSARSLLGAITTFASHAPLLPRNPVPQGATSMLAPAKASPLSGSLRTPKSNHRSQ*
Ga0070684_1014891931	3300005535	Corn Rhizosphere	MQLQVTNIHRRSNGTIDTDVYRQRAFLLRRETKNQILRRLGRSARPLIGAIAILVSYALLLPRNPIPQGAASMLAPAKVSPLSGSLRTQKSNHRSQ*
Ga0070693_1000019261	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	IQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0068855_10001093111	3300005563	Corn Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQSAGSTLAPAKVSVLPSSLRTPKSNHRSQ*
Ga0068856_1007048481	3300005614	Corn Rhizosphere	AMQSQVTNIHRRSNGNVDADVYRRKTFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGPTFAPAKMSLLPDALRAPKLNHRSQ*
Ga0066905_1003608962	3300005713	Tropical Forest Soil	MQVTNMHRRSNGTVDMDVYRRKAFLLRRETTNQILHRFGHIVRTLIGIVAILVSYAPSLRNPVPQGASKLAPAKVSPLFSSLRTSRLNHRSQ*
Ga0081455_1000018555	3300005937	Tabebuia Heterophylla Rhizosphere	MRIQVTNIHRRSNGTVDIDVYRRKALLLRRKTTNQILRRLGRSAWPLIGAIAIVISSALLLPAAEGAGSKLAQAKVSSLSNSLKTFKSN*
Ga0074051_113454321	3300006572	Soil	MQLQVTNIHRRSNGTLDTDVYCQRAILLRRETTNQILRRLGRSARPLLGAIAILVSYALLLPRNPLPQGAASMLAPAKVSPLSDSLRTLKSNHRSQ*
Ga0074055_118507422	3300006573	Soil	MQIQVTNIHRRSNGTLDIDVYCQRAILLRRETTNQILRRLGRSARPLLGAIAILVSYALLLPRNPLPQGAASMLAPAKVSPLSDSLRTLKSNHRSQ*
Ga0074053_119480772	3300006575	Soil	MQLQVTNIHRRSNGTLDIDVYCQRAILLRRETTNQILRRLGRSARPLLGAIAILVSYALLLPRNPLPQGAASMLAPAKVSPLSDSLRTLKSNHRSQ*
Ga0079222_104951112	3300006755	Agricultural Soil	MEIQVTNVHRRSNGTVDTDVYRRKAFLLRRETTNQILRRLGRSVLPRLVGAIAILVSYVLFLPRNPLPQGVGTTFAWAKVSRLADSPKMSKWNHRSQ*
Ga0075431_1016881762	3300006847	Populus Rhizosphere	MRLQVTNIHRRSNGTIDTDVYRRKAFLLRRETTNQILRRLGRSARPLLCAIATLMSYALLLPRNPVPQGANLMLAPAKVSPLSDSLRTPKS
Ga0075433_118124982	3300006852	Populus Rhizosphere	MRIQVTNIQCRSNGTFDMDVYRRMAFLSRRETTNQILRRFGCSVRPLIGAIAIVISFALLLPVAQGAISKLAQARVSSLSDSLRTLKLSHRSQ*
Ga0075426_101744462	3300006903	Populus Rhizosphere	MRIQVTNIQCRSNGTVDMDVYRRMAFLSRRETTNQILRRFGCSVRPLIGAIAIVISFALLLPVAQGAISKLAQARVSSLSDSLRTLKLSHRSQ*
Ga0074063_137626511	3300006953	Soil	MQLQVTNIHRRSNGTLDIDVYCQRAILLRRETTNQILRRLGRSARPLLGAIAILVSYALLLPRNPLPQGAASMLAPAKV
Ga0079219_103476662	3300006954	Agricultural Soil	MRTQVTNIHRRCNGTVDLDVYRREAFLLRRETTNQILRRLGRSARPLIGAIAILVSYALFLARNPMPQGTTSMLAPAKVSPLSDPRRTPKSNHRIQ*
Ga0075435_1010051641	3300007076	Populus Rhizosphere	QIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0075435_1011231281	3300007076	Populus Rhizosphere	QCRSNGTVDMDVYRRMAFLSRRETTNQILRRFGRSVRPLIGAIAIVISFALLLPVAQGAISKLAQARVSSLSDSLRTLKLSHRSQ*
Ga0105240_100273581	3300009093	Corn Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSILPRLIGAIAILVSYVLFLPRNPLPPGAGPTFAPAKMSLLPDALRAPKLNH
Ga0111539_103839712	3300009094	Populus Rhizosphere	MQLQVTNIHHRSNGTVDMDFYRQKAFVLRREATNQILRRLGCIVRPLIGAIAIPVSYVLLLPRNPMRQGTASKFVRAKVAPLTDSLRTPKPNHRSQ*
Ga0111538_109428262	3300009156	Populus Rhizosphere	MQLQVTNIHHRSNGNVDMDFYRQKAFVLRREATNQILRRLGCIVRPLIGAIAIPVSYVLLLPRNPMRQGTASKFVRAKVAPLTDSLRTPKPNHRSQ*
Ga0126384_108079362	3300010046	Tropical Forest Soil	MDVYRREAFLLRRETTNRILRRLGRFVRPYVGAIAIVISSALLLPAAEGAVSKLAQSKVSSLSDSLRTLKLNHRSQ*
Ga0126382_100053751	3300010047	Tropical Forest Soil	MHRRSNGTVDMDVYRRKAFLLRRETTNQILHRFGHIVRTLIGIVAILVNYAPSLRNPVPQGASKLAPAKVSPRFNSLRTSRLNHRSQ*
Ga0126382_122130661	3300010047	Tropical Forest Soil	MRIQVTDIHRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSAWPLIGVIAIVISSTLVLPVAEEAASKLGQAKVSSLSLSLKTFKSDQPNQ*
Ga0126377_100024092	3300010362	Tropical Forest Soil	MRIQATNIYRRSNGTVDMDVYRRKALLLRRETTNQILRRFGRFARPLIGAVAILVSYALLLPRNLVAHGTSSKLAPAKVSPLSDSLKTPRLNQRNQ*
Ga0126377_100915272	3300010362	Tropical Forest Soil	MRIQPTNIHRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGLFVRPLIGAVAIPVSYVLLLPRNPVQQGVASKFARAKVSPLSDSPRSQS*
Ga0134125_106390502	3300010371	Terrestrial Soil	VDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0134125_109014201	3300010371	Terrestrial Soil	QSQVTNIHRRSNGTVDADVYRRKAFLLRRETTNQILRRFGRSVLPRLIGAIAILVSYILFLPRNPLPQGAGSTLAPAKMSLLPDALRAPKLNHRSQ*
Ga0134125_110317212	3300010371	Terrestrial Soil	MQMQVTNIHRRSNGTVDTDAYRQKAFLLRREATNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPHGAGSTFVPAKVSLLPDSLNASRWNHRSQ*
Ga0134125_121434391	3300010371	Terrestrial Soil	MQLQVANIHRRSNGTIDTDVYRRRAFLLRRETTNQILRRLGRSTRPLIGAIAILVSYALLLPRNPIPQGAASMLAPAKVSPLSGSLRTQK
Ga0134126_104257682	3300010396	Terrestrial Soil	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQSAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0134126_105754752	3300010396	Terrestrial Soil	MQVTNIHRRSNGTVDTDAYRQKAFLLRREATNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPHGAGSTFVPAKVSLLPDSLNASRWNHRSQ*
Ga0157281_10137581	3300012883	Soil	IHRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0157284_102196541	3300012893	Soil	PICGLIDEPVIQTEDAMQSQVINIHRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0157292_101053362	3300012900	Soil	VIQTEDAMQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTLAPAKVSVLPSSLRTPKSNHRSQ*
Ga0157295_101104242	3300012906	Soil	MRLQVTNIHRRSNGTVDTDVYRRKAFLLRRETTNQILRRLGRSARPLLCAIATLMSYALLLPRNPVPQGANSMLAPAKVSPLSSSLRTQKSNHRSQ*
Ga0157306_101916842	3300012912	Soil	MQIQVTKIHRRSNGTVDMDVYRRKAFLLRRETTKQILRWFGRSVLPRLIGAIAILVSYILLLPRNRLPQGVCSTFAPAKVSLLPGPLRTPKPNHRSQ*
Ga0126375_100919013	3300012948	Tropical Forest Soil	MHRRNNGTVDMDVYRRKAFLLRRETTNQILHRFGHIVRTLIGIVAILVNYAPSLRNPVPQGASKLAPAKVSPRFNSLRTSRLNHRSQ*
Ga0126375_116449042	3300012948	Tropical Forest Soil	MRIQVTNIQRRSNGTVDTDVYRREAFLLRRESTNRILRQFGRFVRPYIGAIAIVISSALVLPAAEGAVSKLAQAKVSSLSNSLKTFKSSQRSQ*
Ga0164298_100011631	3300012955	Soil	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTWAPAKVSVLPSSLRTPKSNHRSQ*
Ga0164305_108099542	3300012989	Soil	MQVQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0157373_100503902	3300013100	Corn Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRDTTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ*
Ga0157373_111956392	3300013100	Corn Rhizosphere	DVYRQRAFMLRREATNQILRRLGRSVMPRLIGAIAILVSYVLFLQRNPLPQGAGPTFAPAKVSLLSDSRKASKWDHRSQ*
Ga0157377_108430671	3300014745	Miscanthus Rhizosphere	MQSQVTNIHRRSNGNVDADVYRRKAFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGSTFAPAKMSLLPDALMAPKLNHRSQ*
Ga0173483_104090071	3300015077	Soil	RRSNGTVDMDVYRRKAFLLRRETTKQILRWFGRSVLPRLIGAIAILVSYILLLPRNRLPQGACSTFAPAKVSLLPGPLRTPKPNHRSQ*
Ga0132258_110546343	3300015371	Arabidopsis Rhizosphere	MQIQVTNIHRRSNGTVDTDVYRRKAFLLRRETTNRILRRFGRSVLPRLMGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSLLPDSLKTSKWNHRSQ*
Ga0132258_117604492	3300015371	Arabidopsis Rhizosphere	MQLQVTNIHRRSNGTIDTEVYRRKAFLMRRETTNQMLRRLGHIVRPLIGAIAIPVSCALLLSRNPGRQGAASKFTPKVSPLSGSLRTPKLNHRSQ*
Ga0132258_119284232	3300015371	Arabidopsis Rhizosphere	MQSQITSIHRRSNGTVDTDVYRRKAFLLRRETTNKILRRLGRSVLPRMIGAIAILASYILFLPRNPLPQGAGSTFAPAKMSLLPDTLRAPKLNHRSQ*
Ga0132256_1000118173	3300015372	Arabidopsis Rhizosphere	MDIYRREAFLLRRETTNQVLRRFGRFVRPYVGVIAIVISSALLLPAGEGAVSKLAQAKVSSLSNSLRTFKLNHLSQ*
Ga0132256_1004608622	3300015372	Arabidopsis Rhizosphere	MQSQVTNIHRRSNGNVDADVYRRKTFLLRRETTNQILRRLGRSVLPRMIGAIAILASYILFLPRNPLPQGAGSTFAPAKMSLLPDTLRAPKLNHRSQ*
Ga0132255_1025582212	3300015374	Arabidopsis Rhizosphere	MQLQVTNIHRRSNGTIDTEVYRRKAFLMRRETTNQMLRRLGHIVRPLIGAIAIPVSCALLLSRNPGRQGAASKLTPKVSPLSGSLRTPKLSHRSQ*
Ga0173481_100015277	3300019356	Soil	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTKQILRWFGRSVLPRLIGAIAILVSYILLLPRNRLPQGACSTFAPAKVSLLPGPLRTPKPNHRSQ
Ga0173481_100135421	3300019356	Soil	IHRRSNGTVDTDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ
Ga0173482_100010604	3300019361	Soil	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ
Ga0126371_117995292	3300021560	Tropical Forest Soil	MQIRDTSIYCRSNGTADTDVYRQKAFMLRREATNQILRRLGRSVMPRLIGAIAILVSYVLFLQRNPLPQGAGPTFAPAKVSLLSGSRKAPKWDHRSQ
Ga0247747_10001307	3300022737	Soil	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ
Ga0207654_108803332	3300025911	Corn Rhizosphere	MQSQVTNIHRRSNGNVDADVYRRKAFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGPTFAPAKMSLLPDALRAPKLNHRSQ
Ga0207652_112154932	3300025921	Corn Rhizosphere	MQLQVTNIHRRSNGTVDMDVYRWKAFLLRRETTNQILRRLGRSARSLLGAITTFASHAPLLPRNPVPQGATSMLAPAKASPLSGSLRTPKSNHRSQ
Ga0207681_1000013111	3300025923	Switchgrass Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQSAGSTFAPAKVSVLPSSLRTPKSNHRSQ
Ga0207694_102459513	3300025924	Corn Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVMPRLIGAIAILVSYVLFLQRNPLPQGAGPTFAPAKVSLLSDSRKASKWDHRSQ
Ga0207687_1000009062	3300025927	Miscanthus Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ
Ga0207644_101664622	3300025931	Switchgrass Rhizosphere	MQSQVTNIHRRSNGNVDADVYRRKTFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGPTFAPAKMSLLPDALRAPKLNHRSQ
Ga0207690_104419942	3300025932	Corn Rhizosphere	RRLPLTCGLIDAAVIQSEDVMQLQVANIHRRSNGTIDTDVYRRRAFLLRRETTNQILRRLGRSTRPLIGAIAILVSYALLLPRNPIPQGAASMLAPAKVSPLSGSLRTQKSNHRSQ
Ga0207668_117770752	3300025972	Switchgrass Rhizosphere	VMQLQVANIHRRSNGTIDTDVYRRRAFLLRRETTNQILRRLGRSTRPLIGAIAILVSYALLLPRNPIPQGAASMLAPAKVSPLSGSLRTQKSNHRSQ
Ga0207658_1000569011	3300025986	Switchgrass Rhizosphere	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSL
Ga0207677_100234584	3300026023	Miscanthus Rhizosphere	MQIQVTNIHRRSNGTVDTDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ
Ga0207703_108184731	3300026035	Switchgrass Rhizosphere	MQSQVTNIHRRSNGNVDADVYRRKAFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGPTFAPAKMSLLPDALRAPKLNHR
Ga0207678_106604532	3300026067	Corn Rhizosphere	MQIRDTNIHCRSNGTADTDVYRQRAFMLRREATNQILRRLGRSVMPRLIGAIAILVSYVLFLQRNPLPQGAGPTFAPAKVSLLSDSRKASKWDHRSQ
Ga0207708_112058971	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MQLQVANIHRRSNGTIDTDVYRRRAFLLRRETTNQILRRLGRSTRPLIGAIAILVSYALLLPRNPIPQGAASMLAPAKVSPLSGSLRTQKSNHRSQ
Ga0207702_105712611	3300026078	Corn Rhizosphere	AMQSQVTNIHRRSNGNVDADVYRRKTFLLRRETTNQILRRLGRSVLPRMIGAIAILVSYILFLPRNPLPPGAGPTFAPAKMSLLPDALRAPKLNHRSQ
Ga0256821_10066502	3300026452	Sediment	MQLEVTNIHRRSNGTIDIEVYRRKAFLMRRETTNQMLRRLGHIVRPLIGAIAIPVSYALLLSHNPGRQGTASKFTPKVSPLSGSLRTPKLDQRSQ
Ga0207576_1041491	3300026745	Soil	VQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ
Ga0207471_1001021	3300026779	Soil	IHRRSNGTVDTDVYRRKAFLLRRETTNQILRRLGRSVLPQLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ
Ga0207538_10042312	3300027122	Soil	MQIQVTSIRRRSNGTVDMDVYRRKAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLP
Ga0209969_10799032	3300027360	Arabidopsis Thaliana Rhizosphere	MQLQVTNIHRRSNGTIDTDVYRRKAFLLRRETTNQILRRLGRSARPLLCAIATLMSYALLLPRNPVPQGANLMLAPA
Ga0208637_10164031	3300027401	Soil	MQLQVTNIHRRSNGTLDIDVYCQRAILLRRETTNQILRRLGRSARPLLGAIAILVSYALLLPRNPLPQGAASMLAPAKVSPLSDSLRTLKSNHRSQ
Ga0209999_10815362	3300027543	Arabidopsis Thaliana Rhizosphere	MRLQVTNIHRRSNGTIDTNVYRRKAFLLRRETTNQILRRLGRSARPLLCAIATLMSYALLLPRNPVPQGANLMLAPAKVSPLSDSLRTPKSNHRSQ
Ga0209982_10030032	3300027552	Arabidopsis Thaliana Rhizosphere	MRLQVTNIHRRSNGTIDTNVYRRKAFLLRRETTNQILRRLGRSARPLIGAIAILVSYALLLPRNPIPQGAASMLAPAKVSPLSSSLRTQKSNHRSQ
Ga0207981_10605332	3300027560	Soil	MQLQVTNIHRRSNGTLDIDVYCQRAILLRRETTNQILRRLGRSARPLLGAIAILVSYALLLPRNPLPQGAASMLAPAKVSPLSDSLR
Ga0210002_10022503	3300027617	Arabidopsis Thaliana Rhizosphere	MQIQVTNIHRRSNGTVDTDVYRRKAFLLRRETTNQILRRLGRSVLPQLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ
Ga0210002_10483992	3300027617	Arabidopsis Thaliana Rhizosphere	MRLQVTNIHCRSNGTVDMDIYRQKAFLLRRETTNQILRRLGRSARPLIGAIAILVSYALLLPRNPIPQGAASMLAPAKVSPLSSSLRTQKSNHRSQ
Ga0209966_11172632	3300027695	Arabidopsis Thaliana Rhizosphere	MRLQVTNIHRRSNGTIDTNVYRRKAFLLRRETTNQILRRLGRSVRPLIDTIAILVGYALLPRTPLPQGAGSMLARTKVSPLAASLRTPKPNHRSQ
Ga0209998_100833032	3300027717	Arabidopsis Thaliana Rhizosphere	MRLQVTNIHRRSNGTIDTDVYRRRAFLLRRETTSQILRRLGRSARPLIGAIAILVSYALLLPRTPMPQGAASMLAPAKASPLSGSLRTPKSNHRSQ
Ga0209974_100974482	3300027876	Arabidopsis Thaliana Rhizosphere	MRLQVTNIHRRSNGTIDTDVYRRKAFLLRRETTNQILRRLGRSARPLLCAIATLMSYALLLPRNPVPQGANLMLAPAKVSPLSDSLRTPKSNHRSQ
Ga0207428_102937902	3300027907	Populus Rhizosphere	MQLQVTNIHHRSNGTVDMDFYRQKAFVLRREATNQILRRLGCIVRPLIGAIAIPVSYVLLLPRNPMRQGTASKFVRAKVAPLTDSLRTPKPNHRSQ
Ga0247749_10001074	3300027993	Soil	MQIQVTSIRRRSNGTVDMDVYRREAFLLRRETTNQILRRLGHSVLARLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSQ
(restricted) Ga0255311_10003013	3300031150	Sandy Soil	MRLQVTNIHRRSNGTVDTDVYRRKAFLLLRETTNQILRRLGRSARPLLGAIATFISYALFLPRNPVPQGANSMLVPAKVSPLSDSLRTPKSNHRSQ
(restricted) Ga0255311_10100133	3300031150	Sandy Soil	MQLQVTNIHRRSNGTLDTDVYRQRAILVRRETTNQILRRLERSARPLLGAIAILVSYALLLPRNPLPQGAASMLAPAKISPLSDSLRTLKSNHRSQ
(restricted) Ga0255310_1000001910	3300031197	Sandy Soil	MRLQVTNIHRRSNGTVDTDVYRRKAFLLRRETTNQILRRLGRSARPLLGAIATFISYALFLPRNPVPQGANSMLVPAKVSPLSDSLRTPKSNHRSQ
(restricted) Ga0255312_10579452	3300031248	Sandy Soil	MQLQVTNIHRRSNGTLDTDVYRQRAILLRRETTNQILRRLGRSARPLLGAIAILVSYALLLPRNPLPQGAASMLAPAKISPLSDSLRTLKSNHRSQ
Ga0310887_101813702	3300031547	Soil	MQIQVTNIHRRSNGTVDTDVYRRKAFLLRRETTNRILRRFGRSVLPRLMGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSLLPDSLKTSKWNHRSQ
Ga0310813_100623213	3300031716	Soil	MQLQVTNIHRRSNGTIDTDVYRQRAFLLRRETKNQILRRLGRSARPLIGAIAILVSYALLLPRTPMPQGAASMLAPAKVSPLFDSLRTQKLNHRSQ
Ga0307469_121683361	3300031720	Hardwood Forest Soil	GGTTRSEDAMRIQVTNIRRRSNGTVDMDFYRRKAFLLRRETTNQILRRLGRSAWPLIGAIAIVISSALLLPAADGAVSKLAQAKVSSLSNSLKTLKSNQRSQ
Ga0307468_1004365452	3300031740	Hardwood Forest Soil	MRIQVTNIRRRSNGTVDMDFYRRKAFLLRRETTNQILHQFGRFVRPLIGAVAILVNYALSLRNPVPQGAASKLAPVKVFPQSNSLRTSSLNHRSQ
Ga0310890_115198832	3300032075	Soil	MQIQVTNIHRRSNGTVDADVYRRKAFLLRRETTNRILRRFGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSLLPDSLKTSKWNHRSQ
Ga0307470_100126654	3300032174	Hardwood Forest Soil	MRIQVTNIRRRSNGTVDMDFYRRKAFLLRRETTNQILHQIGRFVRPLIGAVAILVNYALSLRNPVPQGAASKLAPVKVFPQSNSLRTSSLNHRSQ
Ga0307471_1001433883	3300032180	Hardwood Forest Soil	MRIQVPNIHRRSNGTVDMDFYRRKAFLLRRETTNQILRRLGRSAWPLIGAIAIVISSALLLPAADGAVSKLAQAKVSSLSNSLKTLKSNQRSQ
Ga0307471_1038807762	3300032180	Hardwood Forest Soil	MQIPVTSIRRRSNGTVDMDVYRRKAFLLRRETTHQILRRLGRSVLPRLIGAIAILVSYVLFLPRNPLPQGAGSTFAPAKVSVLPSSLRTPKSNHRSH
Ga0307472_1006298432	3300032205	Hardwood Forest Soil	MRIQVPNIHRRSNGTVDMDFYRRKAFLLRRETTNQILHQFGRFVRPLIGAVAILVNYALSLRNPVPQGAASKLAPVKVFPQSNSLRTSSLNHRSQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters