Metagenome / Metatranscriptome Family F053953

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053953
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	51 residues
Representative Sequence	MAEPAEKDCCRRTRERWLARIRAYFTSFPVIKDVPCDECREILEIRVY
Number of Associated Samples	104
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.71 %
% of genes near scaffold ends (potentially truncated)	47.14 %
% of genes from short scaffolds (< 2000 bps)	91.43 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (13.571 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.37% β-sheet: 15.79% Coil/Unstructured: 61.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF07992	Pyr_redox_2	6.43
PF13560	HTH_31	5.00
PF05977	MFS_3	4.29
PF12345	DUF3641	4.29
PF03795	YCII	2.86
PF07687	M20_dimer	2.14
PF04055	Radical_SAM	1.43
PF00535	Glycos_transf_2	1.43
PF12146	Hydrolase_4	1.43
PF13419	HAD_2	0.71
PF01906	YbjQ_1	0.71
PF13353	Fer4_12	0.71
PF04784	DUF547	0.71
PF09994	DUF2235	0.71
PF02518	HATPase_c	0.71
PF01381	HTH_3	0.71
PF13414	TPR_11	0.71
PF00271	Helicase_C	0.71
PF05199	GMC_oxred_C	0.71
PF04069	OpuAC	0.71
PF06725	3D	0.71
PF13847	Methyltransf_31	0.71
PF00497	SBP_bac_3	0.71
PF00989	PAS	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	4.29
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.86
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.71
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.86 %
Unclassified	root	N/A	32.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.86 %
Unclassified	root	N/A	32.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.86 %
Unclassified	root	N/A	32.14 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.14 %
Unclassified	root	N/A	32.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	42.86 %
Unclassified	root	N/A	32.14 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	42.86 %
Unclassified	root	N/A	32.14 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.43 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.71 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	40.71 %
Unclassified	root	N/A	32.14 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.43 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.71 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	40.71 %
Unclassified	root	N/A	32.14 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.43 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.71 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105832789	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	999	Open in IMG/M
3300000559\|F14TC_102022771	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	951	Open in IMG/M
3300004156\|Ga0062589_100865713	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	827	Open in IMG/M
3300004281\|Ga0066397_10038654	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	812	Open in IMG/M
3300004463\|Ga0063356_102241624	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300004480\|Ga0062592_100122249	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300004643\|Ga0062591_100688304	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300005174\|Ga0066680_10549561	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005186\|Ga0066676_10949277	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300005332\|Ga0066388_100352499	All Organisms → cellular organisms → Bacteria → Proteobacteria	2118	Open in IMG/M
3300005332\|Ga0066388_101132593	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300005332\|Ga0066388_101466381	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1191	Open in IMG/M
3300005332\|Ga0066388_101573918	Not Available	1155	Open in IMG/M
3300005332\|Ga0066388_101693135	Not Available	1119	Open in IMG/M
3300005332\|Ga0066388_102947171	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300005332\|Ga0066388_104166175	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005332\|Ga0066388_105853397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	621	Open in IMG/M
3300005439\|Ga0070711_101869699	Not Available	527	Open in IMG/M
3300005441\|Ga0070700_100504377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	931	Open in IMG/M
3300005444\|Ga0070694_101872293	Not Available	512	Open in IMG/M
3300005445\|Ga0070708_100042488	All Organisms → cellular organisms → Bacteria	3990	Open in IMG/M
3300005445\|Ga0070708_101583326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300005451\|Ga0066681_10095545	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1694	Open in IMG/M
3300005456\|Ga0070678_102066231	Not Available	539	Open in IMG/M
3300005467\|Ga0070706_100305103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1485	Open in IMG/M
3300005467\|Ga0070706_100579888	Not Available	1043	Open in IMG/M
3300005467\|Ga0070706_101354213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	652	Open in IMG/M
3300005518\|Ga0070699_100430053	Not Available	1196	Open in IMG/M
3300005529\|Ga0070741_10006312	All Organisms → cellular organisms → Bacteria	25595	Open in IMG/M
3300005536\|Ga0070697_100024994	All Organisms → cellular organisms → Bacteria	4761	Open in IMG/M
3300005536\|Ga0070697_100133918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2080	Open in IMG/M
3300005536\|Ga0070697_100572620	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	991	Open in IMG/M
3300005536\|Ga0070697_100746149	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300005546\|Ga0070696_101373244	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300005556\|Ga0066707_10097978	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1796	Open in IMG/M
3300005556\|Ga0066707_10675913	Not Available	650	Open in IMG/M
3300005559\|Ga0066700_10801112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	634	Open in IMG/M
3300005576\|Ga0066708_10696802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	643	Open in IMG/M
3300005614\|Ga0068856_101192153	Not Available	778	Open in IMG/M
3300005713\|Ga0066905_100311677	Not Available	1241	Open in IMG/M
3300005713\|Ga0066905_101145400	Not Available	693	Open in IMG/M
3300005713\|Ga0066905_101734858	Not Available	574	Open in IMG/M
3300005713\|Ga0066905_101775080	Not Available	568	Open in IMG/M
3300005764\|Ga0066903_100552343	All Organisms → cellular organisms → Bacteria → Proteobacteria	1975	Open in IMG/M
3300005764\|Ga0066903_100749012	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1734	Open in IMG/M
3300005764\|Ga0066903_100798540	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300005764\|Ga0066903_101617638	Not Available	1229	Open in IMG/M
3300005764\|Ga0066903_102638525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	974	Open in IMG/M
3300005764\|Ga0066903_103618422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	832	Open in IMG/M
3300005937\|Ga0081455_10672041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300005985\|Ga0081539_10227660	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300006755\|Ga0079222_12265441	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300006797\|Ga0066659_10513561	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	962	Open in IMG/M
3300006847\|Ga0075431_101975883	Not Available	538	Open in IMG/M
3300006854\|Ga0075425_100905813	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1008	Open in IMG/M
3300006854\|Ga0075425_102507254	Not Available	571	Open in IMG/M
3300006871\|Ga0075434_100825779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	943	Open in IMG/M
3300006903\|Ga0075426_11061641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	613	Open in IMG/M
3300007076\|Ga0075435_101172532	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	672	Open in IMG/M
3300009090\|Ga0099827_10188116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1711	Open in IMG/M
3300009148\|Ga0105243_10972391	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	849	Open in IMG/M
3300009156\|Ga0111538_12343864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300009792\|Ga0126374_10149249	Not Available	1414	Open in IMG/M
3300010046\|Ga0126384_10185381	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1635	Open in IMG/M
3300010046\|Ga0126384_11745509	Not Available	590	Open in IMG/M
3300010047\|Ga0126382_10652748	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	875	Open in IMG/M
3300010154\|Ga0127503_10150647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	752	Open in IMG/M
3300010320\|Ga0134109_10328473	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300010337\|Ga0134062_10765315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300010359\|Ga0126376_10252405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1501	Open in IMG/M
3300010360\|Ga0126372_10362499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1305	Open in IMG/M
3300010362\|Ga0126377_12133402	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300010362\|Ga0126377_13153318	Not Available	533	Open in IMG/M
3300010371\|Ga0134125_12159981	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300010391\|Ga0136847_10497799	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	845	Open in IMG/M
3300010391\|Ga0136847_12557713	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	789	Open in IMG/M
3300010397\|Ga0134124_10553973	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300010400\|Ga0134122_10221554	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1581	Open in IMG/M
3300010403\|Ga0134123_12739658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300012202\|Ga0137363_11107704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300012582\|Ga0137358_10296289	Not Available	1098	Open in IMG/M
3300012944\|Ga0137410_11271050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300014967\|Ga0182827_10012256	Not Available	816	Open in IMG/M
3300014967\|Ga0182827_10038296	Not Available	543	Open in IMG/M
3300015358\|Ga0134089_10354948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300015358\|Ga0134089_10528735	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300016341\|Ga0182035_11397027	Not Available	628	Open in IMG/M
3300016341\|Ga0182035_11599116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300016422\|Ga0182039_12257688	Not Available	502	Open in IMG/M
3300017959\|Ga0187779_11230701	Not Available	528	Open in IMG/M
3300017974\|Ga0187777_10968555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300018058\|Ga0187766_10039836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2744	Open in IMG/M
3300018433\|Ga0066667_11536725	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300019458\|Ga0187892_10500921	Not Available	559	Open in IMG/M
3300022213\|Ga0224500_10371057	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300022214\|Ga0224505_10139233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	940	Open in IMG/M
3300025905\|Ga0207685_10865670	Not Available	501	Open in IMG/M
3300025910\|Ga0207684_10826284	Not Available	782	Open in IMG/M
3300025910\|Ga0207684_11282487	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	604	Open in IMG/M
3300025923\|Ga0207681_11333189	Not Available	603	Open in IMG/M
3300026075\|Ga0207708_10534738	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	986	Open in IMG/M
3300026078\|Ga0207702_11102371	Not Available	788	Open in IMG/M
3300026116\|Ga0207674_12067224	Not Available	534	Open in IMG/M
3300026317\|Ga0209154_1157022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	938	Open in IMG/M
3300026317\|Ga0209154_1200956	Not Available	767	Open in IMG/M
3300026327\|Ga0209266_1172914	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	834	Open in IMG/M
3300026537\|Ga0209157_1391205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300026540\|Ga0209376_1034737	All Organisms → cellular organisms → Bacteria → Proteobacteria	3100	Open in IMG/M
3300027900\|Ga0209253_10096088	Not Available	2430	Open in IMG/M
3300030336\|Ga0247826_11534041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300030606\|Ga0299906_10002240	All Organisms → cellular organisms → Bacteria → Proteobacteria	16125	Open in IMG/M
3300030620\|Ga0302046_10015175	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6465	Open in IMG/M
3300031544\|Ga0318534_10244317	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1036	Open in IMG/M
3300031564\|Ga0318573_10192360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1080	Open in IMG/M
3300031713\|Ga0318496_10842286	Not Available	505	Open in IMG/M
3300031720\|Ga0307469_10785928	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300031723\|Ga0318493_10235437	Not Available	975	Open in IMG/M
3300031740\|Ga0307468_100251804	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1243	Open in IMG/M
3300031765\|Ga0318554_10115170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1516	Open in IMG/M
3300031782\|Ga0318552_10205314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	997	Open in IMG/M
3300031820\|Ga0307473_11082316	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300031820\|Ga0307473_11253603	Not Available	553	Open in IMG/M
3300031832\|Ga0318499_10137496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	952	Open in IMG/M
3300031896\|Ga0318551_10642274	Not Available	613	Open in IMG/M
3300032035\|Ga0310911_10615842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300032041\|Ga0318549_10544720	Not Available	521	Open in IMG/M
3300032065\|Ga0318513_10238161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	880	Open in IMG/M
3300032180\|Ga0307471_102107761	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300032180\|Ga0307471_102474190	Not Available	657	Open in IMG/M
3300032205\|Ga0307472_100604362	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300032205\|Ga0307472_101392401	Not Available	680	Open in IMG/M
3300032261\|Ga0306920_103549444	Not Available	576	Open in IMG/M
3300032397\|Ga0315287_12257038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	592	Open in IMG/M
3300032782\|Ga0335082_10119600	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300032829\|Ga0335070_10210675	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300032955\|Ga0335076_10666740	Not Available	922	Open in IMG/M
3300033004\|Ga0335084_10010438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	9309	Open in IMG/M
3300033004\|Ga0335084_11570101	Not Available	649	Open in IMG/M
3300033004\|Ga0335084_11627102	Not Available	636	Open in IMG/M
3300033550\|Ga0247829_11312214	Not Available	599	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.57%
Host-Associated	Host-Associated	11.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.14%
Plants	Host-Associated → Plants	11.43%
Aquatic	Environmental → Aquatic	6.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.43%
Freshwater	Environmental → Aquatic → Freshwater	5.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.00%
Marine	Environmental → Aquatic → Marine	1.43%
Cave	Environmental → Terrestrial → Cave	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.86%
Loam	Environmental → Terrestrial → Soil → Loam	27.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.29%
Lake	Environmental → Aquatic → Freshwater → Lake	3.57%
Sediment	Environmental → Aquatic → Marine → Sediment	1.43%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.71%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.71%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.14%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.43%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.43%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.71%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.14%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.14%
Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Microbial Mat	1.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	1.43%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.43%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.43%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.71%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014967	Freshwater microbial mat microbial communities from Canadian High Arctic Lake 9K, Kuujjuarapik, Canada - Sample L9Ka	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300022213	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058327892	3300000364	Soil	MAKAPAQPAEEKECCRRTRERWERRIRSYYASFPVIKSVPCDTCREIVEIRVLETPAA*
F14TC_1020227712	3300000559	Soil	MAKAPAEPVEEKECCRRTRERWERRIRSYYASFPVIKSVPCDTCREIVEIRVLETPAA*
Ga0062589_1008657132	3300004156	Soil	MRGRVRVRNSPFMAEDPVEKDCCRRTRERWLRRIEAYYTTFPVIKDVPCDECREILEIRVYGLPAA*
Ga0066397_100386542	3300004281	Tropical Forest Soil	DEPAEKDCCRRTRERWMARIRAYFTTFPVIKDVPCDECREILEIRVYSQPAA*
Ga0063356_1022416243	3300004463	Arabidopsis Thaliana Rhizosphere	MRGRVRVRKSPSMTEDPVEKDCCRRTRERWLRRIEAYYTTFPVIKDVPCDDCREILEIRVYGLPAA*
Ga0062592_1001222491	3300004480	Soil	MSEQPAEKDCCRRTRRRWIERIGAYFTSFPVIKDVPCDTCREIIEIR
Ga0062591_1006883041	3300004643	Soil	ENWASAWMRGRVRVRNSPFMAEDPVEKDCCRRTRERWLRRIEAYYTTFPVIKDVPCDECREILEIRVYGLPAA*
Ga0066680_105495612	3300005174	Soil	MAEAPVEKECCQRTRERWLTRIRKYFTSFPVIKDVPCDECREILEIRVYDHPAA*
Ga0066676_109492771	3300005186	Soil	MADESLEKDCCRRTRERWLARIRAHFTSFPVIKDVPCDECREIIE
Ga0066388_1003524991	3300005332	Tropical Forest Soil	MEEKECCRRTRERWERRIRAYYASFPVIKSVPCDTCREILEIRVLEAPVA*
Ga0066388_1011325932	3300005332	Tropical Forest Soil	MAEETVEKDCCRRTRERWMTRIRAYFTSFPVIKDVPCDECREIVEIRVYGLPAA*
Ga0066388_1014663811	3300005332	Tropical Forest Soil	MADEPVEKECCRRTREQWERRIRAYYASFPVIKNVPCDGCREILEI
Ga0066388_1015739182	3300005332	Tropical Forest Soil	MAKALEAVQEKECCRRTRERWERRIRAYYASFPVIKSVPCDTCREILEIRVLEAPVA*
Ga0066388_1016931351	3300005332	Tropical Forest Soil	MAEEPVEKECCRRTRAQWERRIRAYYASFPVIKNVPCDGCREILEIRVFETPAA*
Ga0066388_1029471712	3300005332	Tropical Forest Soil	MAKAPAQPAEEKECCRRTRERWERRIRSYYASFPVIKSVPCETCREIVEIRVLGAPAA*
Ga0066388_1041661752	3300005332	Tropical Forest Soil	MVEAAAEKECCRRTRERWMHRIRSHFTSFPVIKDVPCDECREILEIRVYDWPVA*
Ga0066388_1058533972	3300005332	Tropical Forest Soil	MAQDPDEKDCCRRTRERWERRIRAYYASFPVIKDVPCDTCREILEIR
Ga0070711_1018696991	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MADEKECCRRTRERWMARIRKYFTSFPVIKDVPCDECREILEIRVYAQPVA*
Ga0070700_1005043771	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAEDPVEKDCCRRTRERWLRRIEAYYTTFPVIKDVPCDECREILEIR
Ga0070694_1018722932	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQPAEKDCCRRTRRRWIERIRAYFTSFPVIKDVPCDTCREIIEI
Ga0070708_1000424884	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MADETAEKDCCRRTRERWLARIRAHFSSFPVIKDVPCDECREIVEIRVYGPSAA*
Ga0070708_1015833262	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LGYTRAAMAEADDEKECCRRTRARWMRRIESHFVSLPVIKDVP
Ga0066681_100955453	3300005451	Soil	MADEPEKECCRRTRERWMERIRAHFASYPVIKDVPCDQCLEI
Ga0070678_1020662312	3300005456	Miscanthus Rhizosphere	MAEDPVEKECCRRTRERWLRRIEAYYTTFPVIKDVPCDGCREILEIRVYGLPAA*
Ga0070706_1003051032	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LARTASSATYRPAAMADETAEKECCRRTRERWLARIRSYFTSFPVIKDVPCDDCREIVEIRVYGPSAA*
Ga0070706_1005798882	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MADEIAEKDCCRRTRERWLARIRAHFSSFPVIKDVPCDECREIVEIRVYGPSAA*
Ga0070706_1013542132	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAEAPVEKECCQRTRDRWLARIRKYFTSFPVIKDVPCDECREILEIRVYEHPAA*
Ga0070699_1004300532	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MADETAEKDCCRRTRERWLARIRAHFSSFPVIKDVPCDECR
Ga0070741_1000631213	3300005529	Surface Soil	MADSVAEKPCCARTRARWMKRIAAYYASLPVIKDVPCDECREILEIRVYDLPAAE*
Ga0070697_1000249945	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPDHAEKESCRRTRARWMARIRAYFTSFPVIKDVPCDQCRDIIEIGVYGPPEA*
Ga0070697_1001339183	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAEEVAEKDCCRRTRARWMARIRAYFTSFPVIKDVPCDDCREIVEIRVYRRPAA*
Ga0070697_1005726204	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAEASDEKPCCARTRARWMKRIARHFTSFPVIKDVPCDECRAILELRVYQQPAA*
Ga0070697_1007461492	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MADDAVEKDCCRRTRARWMARIEAYFTSFPVIKDVPCDECREILEIRVYGLPAA*
Ga0070696_1013732442	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MADEATEKDCCRRTRERWIRRIRGYYTSFPVIKDVPCDECREILEIRVYDAA*
Ga0066707_100979782	3300005556	Soil	MADEPAEKVWRRRPRERWLVRIRAHFTSFPVIKDVPCDECREIIEIRVYGPSAA*
Ga0066707_106759132	3300005556	Soil	MPEPPLEKECCRRTRERWLARIEKYFTSFPVIKDVPCDECREI
Ga0066700_108011122	3300005559	Soil	MADEPAEKDCCRRTRERWLDRIRSHFTSFPVIKDVPCDEC
Ga0066708_106968022	3300005576	Soil	MADEPAEKECCRRTRERWLARIRAHFTSFPVIKDVPCDEC
Ga0068856_1011921531	3300005614	Corn Rhizosphere	MADEKDCCRRTRERWMARIRKYFTSFPVIKDVPCDECREILEIRVYGQPAA*
Ga0066905_1003116771	3300005713	Tropical Forest Soil	MAKAPAQPAEEKECCRRTRERWERRIRAYYASFPVIKSVPCDTCREIVEIRVLEAPAA*
Ga0066905_1011454001	3300005713	Tropical Forest Soil	MAEEPVEKECCRRTRAQWERRIRAYYASFPVIKNVPCDGCREILEIRVFETP
Ga0066905_1017348581	3300005713	Tropical Forest Soil	MAEEPVEKECCRRTRARWERRIRAYYASFPVIKDVPCDG
Ga0066905_1017750802	3300005713	Tropical Forest Soil	MAEEPVEKECCRRTRARWERRIRAYYASFPVIKDVPCDGCREILEIRVFETPAA*
Ga0066903_1005523433	3300005764	Tropical Forest Soil	MADEPEKECCRRTRERWMERIRAHFTSYPVIKDVPCDQCLEIIEIR
Ga0066903_1007490122	3300005764	Tropical Forest Soil	MAEDPVEKECCRRTRTQWERRIRAYYASFPVIKNVPCDGCREILEIRVFETPAA*
Ga0066903_1007985402	3300005764	Tropical Forest Soil	MAEEPLEKECCRRTRAQWERRIRAYYASFPVIKNVPCDGCREILEIRVFETPAA*
Ga0066903_1016176381	3300005764	Tropical Forest Soil	EEPVEKECCRRTRARWERRIRAYYASFPVIKDVPCDGCREILEIRVFETPAA*
Ga0066903_1026385251	3300005764	Tropical Forest Soil	MADDPVEKDCCRRTRERWMARIRAYFTTFPVIKDVPCDECREILEIRVYGQPAA*
Ga0066903_1036184221	3300005764	Tropical Forest Soil	MADEPVEKDCCRRTREQWERRIRAYYASFPVIKNVPCDGCREILEIRVF
Ga0081455_106720412	3300005937	Tabebuia Heterophylla Rhizosphere	MAEDPVEKDCCRRTRERWMRRIEAYYTTFPVIKDVPCDQCREILEIRVYGMPAA*
Ga0081539_102276602	3300005985	Tabebuia Heterophylla Rhizosphere	MADETVEKDCCRRTRARWLARIEAYYTSFPVIKDVPCDGCREILEIRVYGLPAA*
Ga0079222_122654411	3300006755	Agricultural Soil	EKDCCRRTRERWLARIRAYFTTFPVIKDVPCDECREILEIRVYSRPAA*
Ga0066659_105135611	3300006797	Soil	MADEPAEKECCRRTRERWLARIRAHFTSFPVIKDVPCDECR
Ga0075431_1019758831	3300006847	Populus Rhizosphere	MSEQPAEKDCCRRTRRRWIERIEAYFTSFPVIKDVPCDTCREIIEIR
Ga0075425_1009058131	3300006854	Populus Rhizosphere	MADEPAEKDCCRRTRERWMARIRAYFTTFPVIKDVPC
Ga0075425_1025072542	3300006854	Populus Rhizosphere	DEKDCCRRTRERWMARIRAYFVSFPVIKDVPCDECREILEIRVYSSPAA*
Ga0075434_1008257792	3300006871	Populus Rhizosphere	MAEDAAEKDCCRRTRERWEKRIRAYYTSFPVIKDVPCDECREILEIRVYDAA*
Ga0075426_110616412	3300006903	Populus Rhizosphere	MAEPPVEKECCRRTRARWLARIGKYFTSFPVIKDVPCDECREILEIRVYEHPAA*
Ga0075435_1011725322	3300007076	Populus Rhizosphere	MSEQPAEKDCCRRTRRRWIDRIGAYFTSFPVIKDVPCDTCREILE
Ga0099827_101881164	3300009090	Vadose Zone Soil	MADEPAEKECCRRTRERWLVRIRAHFTSFPVIKDVPCDECREIIEI
Ga0105243_109723912	3300009148	Miscanthus Rhizosphere	MTEDPVEKDCCRRTRERWLRRIEAYYTTFPVIKDVPCDGCREILEIRVYGLPAA*
Ga0111538_123438642	3300009156	Populus Rhizosphere	MSEQPAEKDCCRRTRRRWIERIGAYFTSFPVIKDVPCDTCRE
Ga0126374_101492492	3300009792	Tropical Forest Soil	MADEPADKECCRHTRERWMARIRAYFTTFHVIKDVPCDECREILEIRVYSQPAA*
Ga0126384_101853813	3300010046	Tropical Forest Soil	MAEEPVEKECCRRTRARWERRIRAYYASFPVIKNVPCDGCREILEIRVFETPAA*
Ga0126384_117455092	3300010046	Tropical Forest Soil	MADEPAEKECCRRTRERWMARIRAYFTTFPVIKDVPCDECREILEIRVYSQPAA*
Ga0126382_106527482	3300010047	Tropical Forest Soil	VHGGFRYIALRRMADEPAEKDCCRRTRERWMARIRAYFTTFPVIKDVPCDECREILEIRVYSQPAA*
Ga0127503_101506472	3300010154	Soil	MATEPVEKDCCRKTRERWERRIRSYYVSFPVIKDVPCDDCREILEIRVFE
Ga0134109_103284732	3300010320	Grasslands Soil	MADEPEKECCRRTRERWMERIRAHFASYPVIKDVPCD
Ga0134062_107653152	3300010337	Grasslands Soil	MADEPAEKDCCRRTRERWLVRIRAHFTSFPVIKDVPCDECREITEIRVYGPSAA*
Ga0126376_102524051	3300010359	Tropical Forest Soil	MEEKECCRRTRERWERRIRAYYASFPVIKSVPCDTCREILEIRVLEAPGA*
Ga0126372_103624991	3300010360	Tropical Forest Soil	MADEPAEKECCRRTRERWMARIRAYFTTFPVIKDVPCDECREILEIRVYSEPAA*
Ga0126377_121334022	3300010362	Tropical Forest Soil	MEEKECCRRTRERWERRIRAYYASFPVIKSVPCDTCREILEIRVL
Ga0126377_131533182	3300010362	Tropical Forest Soil	MAKALEAVQEKECCRRTRERWERRIRAYYASFPVIKNVPCDGCREILEIRVFETPAA*
Ga0134125_121599811	3300010371	Terrestrial Soil	MADEPAEKDCCRRTRERWLARIRAYFTSFPVIKDVPCDECREIVEIRVYGLPAA*
Ga0136847_104977992	3300010391	Freshwater Sediment	MAEEPQEKDCCRRTRARWMRRIRDYYASFPVIKDVPCDGCRQILEIRVYDVPAVS*
Ga0136847_125577132	3300010391	Freshwater Sediment	MAEDPVEKDCCRRTRERWLRRIEAYYTTFPVIKDVPCDECREIL
Ga0134124_105539734	3300010397	Terrestrial Soil	MSDQPAEKDCCRRTRARWIERIGAYFTSFPVIKDVPCDTCRGIIE
Ga0134122_102215543	3300010400	Terrestrial Soil	MAEEPVEKECCRRTRERWMRRIEAYYTTFPVIKDVPCDGCREILEIRVYGLPAA*
Ga0134123_127396582	3300010403	Terrestrial Soil	MAQEPAEKDCCRRTRERWLARIRAYFTSFPVIKDVPCDECREIVELRVYVLPAA*
Ga0137363_111077041	3300012202	Vadose Zone Soil	MADEPAEKECCRRTRERWLARIRAHFTSFPVIKDVPCDECREI
Ga0137358_102962892	3300012582	Vadose Zone Soil	MPEPPAEKECCQRTRERWLARIEKYFTSFPVIKDVPCDECR
Ga0137410_112710501	3300012944	Vadose Zone Soil	MADEPAEKECCRRTRERWLARIRAHFTSFPVIKDVPCDECREILEIRVY
Ga0182827_100122562	3300014967	Microbial Mat	MDEPTDAKECCRRTRERWERRIRAYYASFPVIKDVPCDGCREILEIRVFASPVA*
Ga0182827_100382961	3300014967	Microbial Mat	VIEKDCCQRTRVRWAKRIAAYYTSFPVIKDVPCDECRER
Ga0134089_103549482	3300015358	Grasslands Soil	MADEPEKECCRRTRERWMERILAHFTSYPVIKDVPCDKCLEI
Ga0134089_105287352	3300015358	Grasslands Soil	MPEPPPEKECCQRTRERWLARIEKYFTSFPVIKDVPCDECREILEIRVYGPSAA*
Ga0182035_113970272	3300016341	Soil	MAQDPDEKDCCRRTRERWERRIRAYYASFPVIKDVPCDTCREILEIRVFGSPAA
Ga0182035_115991161	3300016341	Soil	MAEDPDEKDCCRRTRERWERRIRAYYASFPVIKDVP
Ga0182039_122576882	3300016422	Soil	SSCSVESRDTREESRPLMAQEPDEKDCCRRTRERWERRIRTYYASFPVIKDVPCDTCREILEIRVFDSPAA
Ga0187779_112307012	3300017959	Tropical Peatland	MAQDPGEKDCCRATRERWERRIRAYYASFPVIKDVPCDTCREILEIRVFDVPAA
Ga0187777_109685551	3300017974	Tropical Peatland	MADEPAEKRCCARTRERWVARILACFVSFPVIKDVPCDECREILEIRVYGLPAA
Ga0187766_100398362	3300018058	Tropical Peatland	MADEPAEKRCCARTRERWIARIHACFTSFPVIKDVPCDECREILEIRVYGLPAA
Ga0066667_115367252	3300018433	Grasslands Soil	MTEQSGEKDCCRRTRERWLARIRAYFTSFPVIKGVPCDECREILEIRVYSRPAA
Ga0187892_105009212	3300019458	Bio-Ooze	GMADDVEKDCCRATRERWMKRIRLLYTSFPVIKDVPCEGCREILEIRVFDLPAA
Ga0224500_103710571	3300022213	Sediment	MADDEKECCARTRTRWERRIGNHYSSFPVVKDVPCDECRVILEIR
Ga0224505_101392333	3300022214	Sediment	MADDEKECCARTRTRWERRIGNHYSSFPVVKDVPCDECRVILEI
Ga0207685_108656701	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GRRPLSMAEPPAEKDCCQRTRERWLARIQKYFTSFPVIKDVPCDGCREILEIRVFETPAA
Ga0207684_108262841	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MADEIAEKDCCRRTRERWLARIRAHFSSFPVIKDVPCDECREIVEIRVYGPSAA
Ga0207684_112824872	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAEAPVEKECCQRTRDRWLARIRKYFTSFPVIKDVPCDECREILEIRVYEHPAA
Ga0207681_113331892	3300025923	Switchgrass Rhizosphere	MAEDPVEKECCRRTRERWLRRIEAYYTTFPVIKDVPCDGCREILEIRVYGLPAA
Ga0207708_105347381	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAEDPVEKDCCRRTRERWLRRIEAYYTTFPVIKDVPCDECREILEIRV
Ga0207702_111023711	3300026078	Corn Rhizosphere	MADEKDCCRRTRERWMARIRKYFTSFPVIKDVPCDECREILEIRVYGQPAA
Ga0207674_120672241	3300026116	Corn Rhizosphere	MAEEPAEKDCCRRTRARWMERIGAYFASFPVIKDVP
Ga0209154_11570222	3300026317	Soil	MADEPEKECCRRTRERWMERIRAHFASYPVIKDVPCDQCRVYGYPAA
Ga0209154_12009562	3300026317	Soil	MPEPPAEKECCQRTRERWLARIEKYFTSFPVIKDVPCDECREIL
Ga0209266_11729141	3300026327	Soil	MADEPAEKECCRRTRERWLARIRAHFTSFPVIKDVPCDECREIIE
Ga0209157_13912051	3300026537	Soil	MPEPPPEKECCQRTRERWLARIEKYFTSFPVIKDVPCDECREIIEI
Ga0209376_10347375	3300026540	Soil	MADEPAEKECCRRTRERWLARIRSHFTSFPVIKDVPC
Ga0209253_100960883	3300027900	Freshwater Lake Sediment	MAEPTDAKECCRRTRERWERRIRAYYASFPVIKDVPCDGCREILEIRVFASPVA
Ga0247826_115340411	3300030336	Soil	MAEPAEKDCCRRTRERWLARIRAYFTSFPVIKDVPCDECREILEIRVY
Ga0299906_1000224010	3300030606	Soil	MTEETAEKECCRRTREQWMRRITHHYTSFPVIKDVPCDGCAVILEIRVYGAPAV
Ga0302046_100151751	3300030620	Soil	MTEETAEKECCRRTREQWMRRITHHYTSFPVIKDV
Ga0318534_102443172	3300031544	Soil	MAQEPDEKDCCRRTRERWERRIRTYYASFPVIKDVPCDTCREILEIRVFDSPAA
Ga0318573_101923603	3300031564	Soil	MAQDPDEKDCCRRTRARWERRIRAYYASFPVIKDVPCD
Ga0318496_108422862	3300031713	Soil	MADPADEKDCCRRTRARWRKRIADHFTTFPVIKDVPCDGCRDVLEIRVYDRPAA
Ga0307469_107859282	3300031720	Hardwood Forest Soil	MADETVEKDCCRRTRARWMARIEAYYTSFPVIKDVPCDGCREILEIRVYGLPAA
Ga0318493_102354371	3300031723	Soil	SSCSVESRDTREESRPLMAQEPDEKDCCRRTRERWERRIRKYYASFPVIKDVPCDTCREILEIRVFDSPAA
Ga0307468_1002518042	3300031740	Hardwood Forest Soil	MAEEPVEKECCRRTRERWMRRIEAYYTTFPVIKDVPCDGCREILEIRVYGLPAA
Ga0318554_101151701	3300031765	Soil	MPQDPDEKDCCRRTRERWERRIRAYYASFPVIKDVPCDTCREI
Ga0318552_102053142	3300031782	Soil	MTEEPVERDCCRRTRERWMARIRAYFTTFPVIKDVPCDECREILELRVYTWPAA
Ga0307473_110823162	3300031820	Hardwood Forest Soil	MAEADDEKECCRRTRARWMKRIEAHFVSLPVIKDVPCDECRQILEIRVYDLPAA
Ga0307473_112536031	3300031820	Hardwood Forest Soil	MADEPAEKRCCARTRERWIARIRACFTSFPVIKDVPCDECREIVEIRVYGLPAA
Ga0318499_101374961	3300031832	Soil	MAQDPDEKDCCRRTRARWERRIRAYYASFPVIKDVPCDTCRE
Ga0318551_106422742	3300031896	Soil	MADEPVEKECCRRTRTQWERRIRAYYASFPVIKNVPCDGCREILE
Ga0310911_106158422	3300032035	Soil	MAQEPDEKDCCRRTRERWERRIRTYYASFPVIKDVPCDTCREI
Ga0318549_105447201	3300032041	Soil	ARRMADEPLEKRCCARTRERWIARIHACFTSFPVIKDVPCDGCREILEIRVYEPPGD
Ga0318513_102381612	3300032065	Soil	MAQDPDEKDCCRRTRARWERRIRAYYASFPVIKDVPCDTCR
Ga0307471_1021077612	3300032180	Hardwood Forest Soil	MADADPVEKDCCRRTRARWLARIEAYFTSFPVIKDVPCDQCRDIVEIRVYGPPAA
Ga0307471_1024741902	3300032180	Hardwood Forest Soil	MAEPPAEKDCCQRTRERWLARIETSGTSVPVIEDVPCDECREILE
Ga0307472_1006043621	3300032205	Hardwood Forest Soil	MPEADDEKECCRRTRARWMKRIEAHFVSLPVIKDVPCDECRQILEIRVYDLPAA
Ga0307472_1013924012	3300032205	Hardwood Forest Soil	MADADPVEKDCCRRTRARWLARIEAYFTSFPVIKDVPCDKCRQILEIRVYEAESV
Ga0306920_1035494441	3300032261	Soil	LWVTWVAMADEPVEKECCRRTRTQWERRIRAYYASFPVIKNVPCDGCREILEIRVFETPA
Ga0315287_122570381	3300032397	Sediment	MDEPTDAKECCRQTRERWERRIRAYYASFPVIKDVPCDGCREILEIRVFASPVA
Ga0335082_101196002	3300032782	Soil	MVEAAAEKECCRRTIERWNKRIAAYFTAYPVIKDVPCDGCLEILEIRVYEPLEV
Ga0335070_102106753	3300032829	Soil	MLSAMVEAAVEKECCRRTIARWNKRIAAYFTAYPVIKDVPCDECLEILEIRVYEPPGG
Ga0335076_106667402	3300032955	Soil	MVEAAAEKECCRRTIERWNKRIAAYFTAYPVIKDVPCDGCLEILEIRVYEPPEV
Ga0335084_100104389	3300033004	Soil	CRRTIERWNKRIAAYFTAYPVIKDVPCDECLEILEIRVYEPPEA
Ga0335084_115701011	3300033004	Soil	MSAPMVEAAAEKDCCRRTIERWNKRIAAYFTAYPVIKDVPCDECLEILEIRVYEPPEL
Ga0335084_116271022	3300033004	Soil	MSDQAAEKECCAHTRARWLRRIAACFTTYPVIKDVPCDRCREVLEIRVYGPSAA
Ga0247829_113122141	3300033550	Soil	VKGMWARFCGCPWMRGRVRVRTAPSMAEDPVEKDCCRRTRERWLRRIEAYYTTFPVIKDVPCDECREILEIRVYGLPAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053953

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences