Metagenome / Metatranscriptome Family F053662

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053662
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	71 residues
Representative Sequence	LPITRKQFDNSTDTLSAKVLRFLESNPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Number of Associated Samples	82
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.18 %
% of genes near scaffold ends (potentially truncated)	26.95 %
% of genes from short scaffolds (< 2000 bps)	65.96 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.085 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment (15.603 % of family members)
Environment Ontology (ENVO)	Unclassified (51.064 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (40.426 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.86% β-sheet: 5.83% Coil/Unstructured: 56.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF02469	Fasciclin	14.18
PF01243	Putative_PNPOx	12.77
PF03073	TspO_MBR	4.26
PF10967	DUF2769	2.13
PF00106	adh_short	1.42
PF00730	HhH-GPD	1.42
PF12680	SnoaL_2	1.42
PF04832	SOUL	1.42
PF03851	UvdE	1.42
PF01053	Cys_Met_Meta_PP	0.71
PF02580	Tyr_Deacylase	0.71
PF01022	HTH_5	0.71
PF13508	Acetyltransf_7	0.71
PF13450	NAD_binding_8	0.71
PF06023	Csa1	0.71
PF05552	TM_helix	0.71
PF09545	RE_AccI	0.71
PF00881	Nitroreductase	0.71
PF07730	HisKA_3	0.71
PF14026	DUF4242	0.71
PF13238	AAA_18	0.71
PF11588	DUF3243	0.71
PF01047	MarR	0.71
PF04545	Sigma70_r4	0.71
PF13540	RCC1_2	0.71
PF03641	Lysine_decarbox	0.71
PF13507	GATase_5	0.71
PF10543	ORF6N	0.71
PF02572	CobA_CobO_BtuR	0.71
PF14226	DIOX_N	0.71
PF00293	NUDIX	0.71
PF00383	dCMP_cyt_deam_1	0.71
PF01209	Ubie_methyltran	0.71
PF06628	Catalase-rel	0.71
PF14512	TM1586_NiRdase	0.71
PF12638	Staygreen	0.71
PF12686	DUF3800	0.71
PF13784	Fic_N	0.71
PF03992	ABM	0.71
PF01590	GAF	0.71
PF06397	Desulfoferrod_N	0.71
PF01061	ABC2_membrane	0.71
PF13614	AAA_31	0.71
PF04015	DUF362	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	14.18
COG3476	Tryptophan-rich sensory protein TspO/CrtK (mitochondrial benzodiazepine receptor homolog)	Signal transduction mechanisms [T]	4.26
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	1.42
COG0177	Endonuclease III	Replication, recombination and repair [L]	1.42
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	1.42
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	1.42
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	1.42
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	1.42
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.71
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.71
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.71
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.71
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.71
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.71
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.71
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.71
COG4343	CRISPR/Cas system-associated exonuclease Cas4, RecB family	Defense mechanisms [V]	0.71
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.71
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.71
COG2109	ATP:corrinoid adenosyltransferase	Coenzyme transport and metabolism [H]	0.71
COG2033	Desulfoferrodoxin, superoxide reductase-like (SORL) domain	Energy production and conversion [C]	0.71
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.71
COG2006	Uncharacterized conserved protein, DUF362 family	Function unknown [S]	0.71
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.71
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.71
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.71
COG1490	D-aminoacyl-tRNA deacylase	Translation, ribosomal structure and biogenesis [J]	0.71
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.71
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.71
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.71
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.71
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.71
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.89 %
Unclassified	root	N/A	24.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.89 %
Unclassified	root	N/A	24.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.09 %
Unclassified	root	N/A	24.11 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	7.80 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.04 %
Unclassified	root	N/A	24.11 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	6.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	12.06 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	3.55 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.71 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	7.09 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	2.13 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.71 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.71 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	1.42 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.71 %
Chloroflexi bacterium RBG_13_51_36	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	0.71 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.71 %
Methanocellales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales	0.71 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	0.71 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.71 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
unclassified Haloferacales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → unclassified Haloferacales	1.42 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Methanocellaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae	0.71 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.71 %
Dehalococcoidia bacterium SG8_51_3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium SG8_51_3	0.71 %
Methanomicrobiaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae	0.71 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.71 %
Syntrophomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae	0.71 %
Chloroflexi bacterium RBG_13_51_36	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
halophilic archaeon DL31	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → unclassified Haloferacales → halophilic archaeon DL31	1.42 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Syntrophomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas	0.71 %
Methanocella	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella	0.71 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.71 %
Methanoculleus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	0.71 %
Dehalococcoidia bacterium SG8_51_3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium SG8_51_3	0.71 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.71 %
Chloroflexi bacterium RBG_13_51_36	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
halophilic archaeon DL31	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → unclassified Haloferacales → halophilic archaeon DL31	1.42 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
unclassified Syntrophomonas	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → unclassified Syntrophomonas	0.71 %
Methanocella	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella	0.71 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.71 %
Methanoculleus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	0.71 %
Dehalococcoidia bacterium SG8_51_3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium SG8_51_3	0.71 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.71 %
Chloroflexi bacterium RBG_13_51_36	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
halophilic archaeon DL31	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → unclassified Haloferacales → halophilic archaeon DL31	1.42 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.42 %
Syntrophomonas sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → unclassified Syntrophomonas → Syntrophomonas sp.	0.71 %
Methanocella	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella	0.71 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.71 %
Methanoculleus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	0.71 %
Dehalococcoidia bacterium SG8_51_3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium SG8_51_3	0.71 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.71 %
Chloroflexi bacterium RBG_13_51_36	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	0.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2100351011\|ASMM170b_contig01520__length_986___numreads_9	All Organisms → cellular organisms → Bacteria → Terrabacteria group	986	Open in IMG/M
3300000362\|SL_1KL_011_SEDDRAFT_10243416	Not Available	541	Open in IMG/M
3300000393\|WOR_101815	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300001371\|BBDRAFT_10332451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	2575	Open in IMG/M
3300001371\|BBDRAFT_10379290	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1058	Open in IMG/M
3300001371\|BBDRAFT_10393470	All Organisms → cellular organisms → Bacteria → Terrabacteria group	893	Open in IMG/M
3300001371\|BBDRAFT_10397593	Not Available	853	Open in IMG/M
3300001751\|JGI2172J19969_10044855	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300001751\|JGI2172J19969_10223619	All Organisms → cellular organisms → Bacteria → Terrabacteria group	515	Open in IMG/M
3300001753\|JGI2171J19970_10015196	All Organisms → cellular organisms → Bacteria	3508	Open in IMG/M
3300001782\|WOR52_10013812	All Organisms → cellular organisms → Bacteria	8916	Open in IMG/M
3300001782\|WOR52_10043703	All Organisms → cellular organisms → Archaea → Euryarchaeota	5608	Open in IMG/M
3300001854\|JGI24422J19971_10132043	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1203	Open in IMG/M
3300001854\|JGI24422J19971_10425549	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → unclassified Haloferacales → halophilic archaeon DL31	502	Open in IMG/M
3300003852\|Ga0031655_10059786	Not Available	1632	Open in IMG/M
3300003859\|Ga0031653_10173618	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → unclassified Haloferacales → halophilic archaeon DL31	563	Open in IMG/M
3300004029\|Ga0055442_10018243	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300004481\|Ga0069718_15056732	Not Available	889	Open in IMG/M
3300004481\|Ga0069718_16108189	Not Available	755	Open in IMG/M
3300005254\|Ga0068714_10073177	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300005613\|Ga0074649_1047814	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300005782\|Ga0079367_1007695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5610	Open in IMG/M
3300005782\|Ga0079367_1012146	All Organisms → cellular organisms → Bacteria	4232	Open in IMG/M
3300005782\|Ga0079367_1015563	All Organisms → cellular organisms → Bacteria	3633	Open in IMG/M
3300005782\|Ga0079367_1184065	All Organisms → cellular organisms → Bacteria → Terrabacteria group	814	Open in IMG/M
3300005823\|Ga0078745_1110684	Not Available	779	Open in IMG/M
3300005832\|Ga0074469_10127909	Not Available	611	Open in IMG/M
3300005832\|Ga0074469_10188032	All Organisms → cellular organisms → Bacteria	3317	Open in IMG/M
3300005832\|Ga0074469_10951777	All Organisms → cellular organisms → Bacteria	7982	Open in IMG/M
3300005832\|Ga0074469_10953152	All Organisms → cellular organisms → Bacteria	3805	Open in IMG/M
3300005832\|Ga0074469_11170996	Not Available	1647	Open in IMG/M
3300007533\|Ga0102944_1091840	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1070	Open in IMG/M
3300008516\|Ga0111033_1185400	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300008517\|Ga0111034_1190877	All Organisms → cellular organisms → Bacteria	10252	Open in IMG/M
3300008517\|Ga0111034_1191131	All Organisms → cellular organisms → Bacteria	3113	Open in IMG/M
3300009034\|Ga0115863_1011909	All Organisms → cellular organisms → Bacteria	12379	Open in IMG/M
3300009034\|Ga0115863_1092867	All Organisms → cellular organisms → Bacteria	3777	Open in IMG/M
3300009034\|Ga0115863_1113814	All Organisms → cellular organisms → Bacteria	3355	Open in IMG/M
3300009499\|Ga0114930_10078901	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300009504\|Ga0114946_10032190	Not Available	3074	Open in IMG/M
3300009506\|Ga0118657_10944808	Not Available	1059	Open in IMG/M
3300009509\|Ga0123573_10341739	Not Available	1643	Open in IMG/M
3300009529\|Ga0114919_10240074	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300011118\|Ga0114922_10235673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium SG8_51_3	1537	Open in IMG/M
3300011118\|Ga0114922_10361378	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	1207	Open in IMG/M
3300011118\|Ga0114922_10487511	Not Available	1020	Open in IMG/M
3300011118\|Ga0114922_10526046	All Organisms → cellular organisms → Bacteria → Terrabacteria group	977	Open in IMG/M
3300011118\|Ga0114922_11699351	Not Available	506	Open in IMG/M
3300012931\|Ga0153915_13296818	Not Available	524	Open in IMG/M
3300012964\|Ga0153916_10019957	All Organisms → cellular organisms → Archaea → Euryarchaeota	5644	Open in IMG/M
3300017963\|Ga0180437_10031605	All Organisms → cellular organisms → Bacteria	5352	Open in IMG/M
3300017963\|Ga0180437_10094063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	2558	Open in IMG/M
3300017963\|Ga0180437_10304346	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300017971\|Ga0180438_10082546	All Organisms → cellular organisms → Archaea → Euryarchaeota	2833	Open in IMG/M
3300017971\|Ga0180438_10178177	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1711	Open in IMG/M
3300017971\|Ga0180438_10270350	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella	1319	Open in IMG/M
3300017971\|Ga0180438_11320722	Not Available	517	Open in IMG/M
3300017992\|Ga0180435_10545607	Not Available	970	Open in IMG/M
3300018080\|Ga0180433_10251278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1414	Open in IMG/M
3300022208\|Ga0224495_10001156	All Organisms → cellular organisms → Bacteria	19156	Open in IMG/M
3300022208\|Ga0224495_10002206	Not Available	12945	Open in IMG/M
3300022208\|Ga0224495_10002291	All Organisms → cellular organisms → Bacteria	12564	Open in IMG/M
3300022208\|Ga0224495_10012535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4358	Open in IMG/M
3300022208\|Ga0224495_10079296	Not Available	1453	Open in IMG/M
3300022208\|Ga0224495_10170749	All Organisms → cellular organisms → Bacteria → Terrabacteria group	920	Open in IMG/M
3300022208\|Ga0224495_10271451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	689	Open in IMG/M
3300022208\|Ga0224495_10423417	Not Available	519	Open in IMG/M
3300022217\|Ga0224514_10402307	Not Available	510	Open in IMG/M
3300022223\|Ga0224501_10341545	All Organisms → cellular organisms → Bacteria → Terrabacteria group	757	Open in IMG/M
3300022307\|Ga0224507_10017045	Not Available	2819	Open in IMG/M
3300022309\|Ga0224510_10124268	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300022309\|Ga0224510_10286865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	991	Open in IMG/M
3300022309\|Ga0224510_10844656	Not Available	519	Open in IMG/M
3300025135\|Ga0209498_1031076	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	2614	Open in IMG/M
3300027690\|Ga0209164_1029395	All Organisms → cellular organisms → Bacteria	2952	Open in IMG/M
3300027740\|Ga0214474_1039080	All Organisms → cellular organisms → Archaea	1843	Open in IMG/M
3300027888\|Ga0209635_10610130	All Organisms → cellular organisms → Bacteria → Terrabacteria group	813	Open in IMG/M
3300027888\|Ga0209635_10613284	All Organisms → cellular organisms → Bacteria → Terrabacteria group	810	Open in IMG/M
3300027888\|Ga0209635_10705382	All Organisms → cellular organisms → Bacteria → Terrabacteria group	737	Open in IMG/M
3300027888\|Ga0209635_10731567	Not Available	719	Open in IMG/M
3300027888\|Ga0209635_11014118	Not Available	572	Open in IMG/M
3300027893\|Ga0209636_10157653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	2125	Open in IMG/M
3300027893\|Ga0209636_11280565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	509	Open in IMG/M
3300027896\|Ga0209777_10001417	All Organisms → cellular organisms → Bacteria	34679	Open in IMG/M
3300027900\|Ga0209253_10120540	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300027900\|Ga0209253_10123718	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2109	Open in IMG/M
3300027900\|Ga0209253_10291052	Not Available	1272	Open in IMG/M
3300027901\|Ga0209427_10637497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	779	Open in IMG/M
3300027901\|Ga0209427_10697458	All Organisms → cellular organisms → Bacteria → Terrabacteria group	733	Open in IMG/M
3300027917\|Ga0209536_100243432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_36	2254	Open in IMG/M
3300030714\|Ga0307925_101912	All Organisms → cellular organisms → Bacteria	2587	Open in IMG/M
3300031255\|Ga0315554_1001141	All Organisms → cellular organisms → Bacteria	15756	Open in IMG/M
3300031255\|Ga0315554_1202302	Not Available	659	Open in IMG/M
3300031257\|Ga0315555_1078109	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300031257\|Ga0315555_1183471	All Organisms → cellular organisms → Bacteria → Terrabacteria group	857	Open in IMG/M
3300031257\|Ga0315555_1187620	Not Available	844	Open in IMG/M
3300031257\|Ga0315555_1275557	All Organisms → cellular organisms → Bacteria → Terrabacteria group	635	Open in IMG/M
3300031274\|Ga0307442_1066238	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1099	Open in IMG/M
3300031275\|Ga0307437_1179242	Not Available	577	Open in IMG/M
3300031278\|Ga0307431_1047663	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1259	Open in IMG/M
3300031278\|Ga0307431_1137126	All Organisms → cellular organisms → Bacteria → Terrabacteria group	595	Open in IMG/M
3300031280\|Ga0307428_1000478	All Organisms → cellular organisms → Bacteria	25732	Open in IMG/M
3300031356\|Ga0307439_1064939	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300031365\|Ga0307443_1019640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2622	Open in IMG/M
3300031365\|Ga0307443_1076212	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300031539\|Ga0307380_10347774	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1355	Open in IMG/M
3300031553\|Ga0315547_1000323	All Organisms → cellular organisms → Bacteria	50326	Open in IMG/M
3300031553\|Ga0315547_1251876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	533	Open in IMG/M
3300031554\|Ga0315544_1005360	All Organisms → cellular organisms → Bacteria	7667	Open in IMG/M
3300031565\|Ga0307379_10785357	All Organisms → cellular organisms → Bacteria → Terrabacteria group	841	Open in IMG/M
3300031566\|Ga0307378_10015290	All Organisms → cellular organisms → Bacteria	9589	Open in IMG/M
3300031575\|Ga0315532_1007052	All Organisms → cellular organisms → Bacteria	6222	Open in IMG/M
3300031578\|Ga0307376_10580105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	716	Open in IMG/M
3300031620\|Ga0315552_1007422	All Organisms → cellular organisms → Bacteria	5812	Open in IMG/M
3300031620\|Ga0315552_1073868	Not Available	1271	Open in IMG/M
3300031620\|Ga0315552_1225189	All Organisms → cellular organisms → Bacteria → Terrabacteria group	547	Open in IMG/M
3300031643\|Ga0315533_1010645	All Organisms → cellular organisms → Bacteria	4629	Open in IMG/M
3300031650\|Ga0315539_1170799	All Organisms → cellular organisms → Bacteria → Terrabacteria group	662	Open in IMG/M
3300031653\|Ga0315550_1326504	All Organisms → cellular organisms → Bacteria → Terrabacteria group	536	Open in IMG/M
3300031654\|Ga0315549_1196878	All Organisms → cellular organisms → Bacteria → Terrabacteria group	792	Open in IMG/M
3300031698\|Ga0315537_1010278	All Organisms → cellular organisms → Bacteria	6254	Open in IMG/M
3300031698\|Ga0315537_1265357	All Organisms → cellular organisms → Bacteria → Terrabacteria group	697	Open in IMG/M
3300031707\|Ga0315291_10004969	All Organisms → cellular organisms → Bacteria	16773	Open in IMG/M
3300031707\|Ga0315291_10083699	All Organisms → cellular organisms → Bacteria	3483	Open in IMG/M
3300031746\|Ga0315293_10362006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → unclassified Syntrophomonas → Syntrophomonas sp.	1149	Open in IMG/M
3300031873\|Ga0315297_10716604	Not Available	837	Open in IMG/M
3300031885\|Ga0315285_10147904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1957	Open in IMG/M
3300031952\|Ga0315294_10256090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1705	Open in IMG/M
3300031952\|Ga0315294_10308461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	1518	Open in IMG/M
3300032046\|Ga0315289_11528416	Not Available	507	Open in IMG/M
3300032062\|Ga0315551_10128029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1124	Open in IMG/M
3300032062\|Ga0315551_10294750	All Organisms → cellular organisms → Bacteria → Terrabacteria group	616	Open in IMG/M
3300032062\|Ga0315551_10366229	All Organisms → cellular organisms → Bacteria → Terrabacteria group	528	Open in IMG/M
3300032118\|Ga0315277_10045285	All Organisms → cellular organisms → Archaea → Euryarchaeota	5146	Open in IMG/M
3300032118\|Ga0315277_11249812	Not Available	655	Open in IMG/M
3300032156\|Ga0315295_10071537	All Organisms → cellular organisms → Bacteria	3315	Open in IMG/M
3300032156\|Ga0315295_10437050	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300032163\|Ga0315281_10017795	All Organisms → cellular organisms → Bacteria	9433	Open in IMG/M
3300032342\|Ga0315286_10707529	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1028	Open in IMG/M
3300032401\|Ga0315275_12651063	Not Available	516	Open in IMG/M
3300033991\|Ga0334965_0061984	Not Available	1741	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.58%
Engineered	Engineered	1.42%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.62%
Terrestrial	Environmental → Terrestrial	4.96%
Lab Enrichment	Engineered → Lab Enrichment	1.42%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	61.70%
Freshwater	Environmental → Aquatic → Freshwater	19.86%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	7.80%
Soil	Environmental → Terrestrial → Soil	4.96%
Sediment	Environmental → Aquatic → Sediment	4.26%
Defined Media	Engineered → Lab Enrichment → Defined Media	1.42%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	27.66%
Oceanic	Environmental → Aquatic → Marine → Oceanic	15.60%
Lake	Environmental → Aquatic → Freshwater → Lake	11.35%
Sediment	Environmental → Aquatic → Marine → Sediment	9.93%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	6.38%
Coastal	Environmental → Aquatic → Marine → Coastal	5.67%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.26%
Clay	Environmental → Terrestrial → Soil → Clay	3.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.42%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.42%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	1.42%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.71%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.71%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.71%
Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline	0.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	21.28%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	15.60%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	11.35%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	9.93%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	6.38%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	6.38%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	5.67%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.26%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.84%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.42%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.71%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.71%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.71%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.71%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.71%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Sediment	0.71%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	15.60%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	11.35%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	10.64%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	9.93%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	6.38%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	5.67%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.67%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	4.96%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	4.26%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.55%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.55%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	2.84%
Sediment, Intertidal	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal	2.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.42%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.42%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	1.42%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	1.42%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.71%
Coastal Water And Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Coastal Water And Sediment	0.71%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vents	0.71%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.71%
Alkaline Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Sediment → Alkaline Sediment	0.71%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.71%
Pond Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Pond Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2100351011	Marine sediment microbial communities from Arctic Ocean, off the coast from Alaska - sample from medium methane PC12-240-170cm	Environmental	Open in IMG/M
3300000362	Alkaline sediment microbial communities from Cock Soda Lake, Kulunda Steppe, Russia - 1KL_011_SED	Environmental	Open in IMG/M
3300000393	GB background transcript assembly	Environmental	Open in IMG/M
3300001371	Baker-B-sed	Environmental	Open in IMG/M
3300001751	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32	Environmental	Open in IMG/M
3300001753	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-24_28	Environmental	Open in IMG/M
3300001782	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_deep_samples	Environmental	Open in IMG/M
3300001854	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300004029	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordB_D2	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005254	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG	Engineered	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300005782	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3	Environmental	Open in IMG/M
3300005823	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, MM2	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300007533	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_D_shore_MG	Environmental	Open in IMG/M
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300008517	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 175 cmbsf. Combined Assembly of Gp0128389 and Gp0131431 MM4PM4	Environmental	Open in IMG/M
3300009034	Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, Korea	Environmental	Open in IMG/M
3300009499	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG	Environmental	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental	Open in IMG/M
3300017992	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_S_1 metaG	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022217	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_24	Environmental	Open in IMG/M
3300022223	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_8_1	Environmental	Open in IMG/M
3300022307	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_13	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300025135	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment (SPAdes)	Environmental	Open in IMG/M
3300027690	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300030714	Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - UN-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031255	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70	Environmental	Open in IMG/M
3300031257	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-80	Environmental	Open in IMG/M
3300031274	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30	Environmental	Open in IMG/M
3300031275	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-90	Environmental	Open in IMG/M
3300031278	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-170	Environmental	Open in IMG/M
3300031280	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-240	Environmental	Open in IMG/M
3300031356	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-90	Environmental	Open in IMG/M
3300031365	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1601-220	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031553	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-240	Environmental	Open in IMG/M
3300031554	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-130	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031575	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment WE1603-70	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031620	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-70	Environmental	Open in IMG/M
3300031643	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-30	Environmental	Open in IMG/M
3300031650	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-150	Environmental	Open in IMG/M
3300031653	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-90	Environmental	Open in IMG/M
3300031654	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-200	Environmental	Open in IMG/M
3300031698	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-70	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032062	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-90	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ASMM170b_05014520	2100351011	Coastal Water And Sediment	LPITRKEFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
SL_1KL_011_SEDDRAFT_102434161	3300000362	Alkaline Sediment	MPITRKEFDDSIDTLSAKLLAFLESNPNQAFDIEELAEAIGGRKLEVWAILDALKQRGQVSGKCVKGTGYYCIAK*
WOR_1018152	3300000393	Hydrothermal Vents	LPITRKEFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDDLKRRKQVSGKCIKGTGYYCLAK*
BBDRAFT_103324513	3300001371	Marine Estuarine	MPITRKEFDDSIDTLSAKVLKLLESHPNDAFEIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK*
BBDRAFT_103792902	3300001371	Marine Estuarine	LPITRKQFDNSTDTLSAKVLRFLESNPDDAFELEELAEAVGGKQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK*
BBDRAFT_103934701	3300001371	Marine Estuarine	LPITRKQFDNSTDTLSAKVLRFLESKPDDAFELEELAEAVGGRQLEVWAILDELKRRNQVSGKCIKGMGYYCLAK*
BBDRAFT_103975933	3300001371	Marine Estuarine	MPITRKEFDDSIDTLSAKVLKFLESNPNDAFEIEELAEAVGGRQLEVWAILDALKQRKQVSGKCLKGTGYYCIAK*
JGI2172J19969_100448552	3300001751	Marine Sediment	LPITRKEFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKQVSGKCIKGTGYYCLAK*
JGI2172J19969_102236191	3300001751	Marine Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPDDAFELEEIAEAAGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK*
JGI2171J19970_100151963	3300001753	Marine Sediment	LPITRKEFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKQVSGKCIKRTGYYCLAK*
WOR52_1001381213	3300001782	Marine Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPNDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGAGYYCVAK*
WOR52_100437037	3300001782	Marine Sediment	LPITRKQFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTG*
JGI24422J19971_101320432	3300001854	Marine Sediment	TRKEFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRRKQVSGKCIKGTGYYCLAK*
JGI24422J19971_104255491	3300001854	Marine Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPDDAFELEEIAEAVGGRQLEVWAILDDLKRREQVSGKCIKGTGYYCVAK*
Ga0031655_100597862	3300003852	Freshwater Lake Sediment	MPIPRKQFDKSIDTLSVKVLKFLKSHPDEAFEIEELAEAVGGRQLEVWAILDDLKRRKQVTGKCIKGKGYYCV*
Ga0031653_101736181	3300003859	Freshwater Lake Sediment	MPITRKEFDDSLDTLSAKVLKFLESNPNDAFEIEELAKAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK*
Ga0055442_100182432	3300004029	Natural And Restored Wetlands	LPITREQFDKNTDTLSEEVLRFLKSNADEAFDIEEIAKAVGGRQLEIWAILDDLKRRQQVSGKCIKGNGYYCVGK*
Ga0069718_150567323	3300004481	Sediment	MPIPRKQFDKSIDTLSVKVLKFLKSHPEEAFEIEELAEAVGGRQLEVWAILDDLKRRKQITSKCIKGKGYYCV*
Ga0069718_161081892	3300004481	Sediment	MPITRKEFDDTIDTLSAKVLKFLESHPNDAFGIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCVAK*
Ga0068714_100731772	3300005254	Enrichment Culture	LPITRKEFDNSTDTLSARVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKQVSGKCIKGTGYYCLAK*
Ga0074649_10478145	3300005613	Saline Water And Sediment	MPITRKEFDDSIDTLSAKVLKFLESNPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCLAK*
Ga0079367_10076959	3300005782	Marine Sediment	LPITRKEFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKKVSGKCIKGTGYYCLAK*
Ga0079367_10121466	3300005782	Marine Sediment	KVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKQVSGKCIKGTGYYCLAK*
Ga0079367_10155634	3300005782	Marine Sediment	LPITRKEFDNSTDTLSTKVVRFLESKPDDAFELEELAEAVGGRQLEVWAVLDELKRRKQVSGKCIKGTGYYCVAK*
Ga0079367_11840652	3300005782	Marine Sediment	LPITRKQFNNSTDMLSAKVLRFLESNPDDAFELEEIAEAAGGRQLEVWAILDDLKRREQVSGKCIKGMGYYCVAK*
Ga0078745_11106842	3300005823	Marine Sediment	MPITRKEFDDSIDTLSAKVLKFLESHPNDAFEIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAE*
Ga0074469_101279092	3300005832	Sediment (Intertidal)	MPIPRKQFDRTTDTLSAEVLRFLKSNADEAFDIEEIAEAVGGRQLEVWAILDDLKRAKEVSGKCIKGNGYYCVGK*
Ga0074469_101880324	3300005832	Sediment (Intertidal)	MPITRREFDDSIDTLSAKVLKLLESHPNDAFEIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK*
Ga0074469_109517773	3300005832	Sediment (Intertidal)	MPITRKEFDDSIDTLSAKVLKFMESNPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK*
Ga0074469_109531524	3300005832	Sediment (Intertidal)	LPITRKQFDNSTDTLSAKVLRFLESKPDDAFELEELAEAVGGRQLEVWAVLDELKRRKQVSGKCIKGTGYYCVAK*
Ga0074469_111709962	3300005832	Sediment (Intertidal)	MPITRKEFDDSIDTLSAKVLKFLESNPNDAFEIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK*
Ga0102944_10918401	3300007533	Pond Soil	DTLSAKVVRFLESNPDDAFELEEFAEAVGSRQLEVWAILDDLKRREQVSGKCIKGTGYYCLAK*
Ga0111033_11854003	3300008516	Marine Sediment	TLSAKVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKQVSGKCIKGTGYYCLAK*
Ga0111034_119087711	3300008517	Marine Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPHDAFELEEIAEAAGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK*
Ga0111034_11911313	3300008517	Marine Sediment	MPITRKEFDDSIDTLSAKVLEFLESHPDDAFDIEELAEAVGGIRFEVWAILDALKQRKQVSGKCVKGTGYYCIAK*
Ga0115863_10119094	3300009034	Sediment, Intertidal	MPIPRKQFDKTIDTLSAEVLRFLKSHADEAFDIEEIAEAVGGRQIEVWAILDDLKRAKQVSGKCIKGNGYYCVGK*
Ga0115863_10928673	3300009034	Sediment, Intertidal	VLRFLESNPDDAFELEEIAEAVGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK*
Ga0115863_11138142	3300009034	Sediment, Intertidal	VPISRKQFDKTTDTLSAEVLRFLKSNADEAFDIEEIAEAVGGRQLEVWAILDVLKREKEVSGKCVEGNGYYCVMK*
Ga0114930_100789011	3300009499	Deep Subsurface	FDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK*
Ga0114946_100321902	3300009504	Sediment	MPIKRKVFDDSIDTLSAKVLEFLESHPDDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCVAK*
Ga0118657_109448081	3300009506	Mangrove Sediment	VPIPREQFDNNIDTLSAEVLRFLKSNADEAFDIEEIADAVGGRQIEIWAILDNLKRTKEISGKCIKGNGYYCIAK*
Ga0123573_103417392	3300009509	Mangrove Sediment	MPITRKEFNDSIDTLSAKVLEFLESNPHAAFEIKEISEAVGGLQLEVWAILDALKQRKQVSGKCIKGTGYYCIAK*
Ga0114919_102400742	3300009529	Deep Subsurface	LPITRKQFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK*
Ga0114922_102356733	3300011118	Deep Subsurface	FLESNPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK*
Ga0114922_103613782	3300011118	Deep Subsurface	MPITRKEFDDSIDTLSAKVLKFLESHPNDAFEIEELAEAVGGRQLEVWAILDALKQRTQVSGKCVKGTGYYCIAK*
Ga0114922_104875111	3300011118	Deep Subsurface	MPITRREFDDSIDTLSARLLKFLESNPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSG
Ga0114922_105260461	3300011118	Deep Subsurface	VVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKKVSGKCIKGTGYYCLAK*
Ga0114922_116993511	3300011118	Deep Subsurface	MPITRKEFDDSIDTLSAKVLKFLESNPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSG
Ga0153915_132968181	3300012931	Freshwater Wetlands	MPIPRKQFDKSIDTLSVKVLKFLKSHPEEAFEIQELAEAVGGRQLEVWAILDDLKRRKQVTSKCIKGKGYYCV*
Ga0153916_100199576	3300012964	Freshwater Wetlands	MPITRKEFDDSIDTLSAKLLRFLEANPKQAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGAGYYCIAK*
Ga0180437_100316053	3300017963	Hypersaline Lake Sediment	MPITRKEFNDSIDTLSAKVLEFLESNPNDAFELKELAQAVGGRQLEVWAVLDALKQRKQVSGKCIKGTGYYCIAQ
Ga0180437_100940634	3300017963	Hypersaline Lake Sediment	MPITRKEFDDSTDTLSAKVLRFLEENPNQAFDIDELAEAVGGRQLEVWAILDALKQRKQVSRKCVKGTGYYCIAK
Ga0180437_103043461	3300017963	Hypersaline Lake Sediment	EFDDSIDTLSAKVLKFLESHPNDAFGIEELAEAVGGGQLDVWAILDALKQRKQVSGKCVKGTGYYCLAK
Ga0180438_100825463	3300017971	Hypersaline Lake Sediment	MPITRKEFDDSTDTLSAKVLRFLEENPNQAFDIDELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0180438_101781773	3300017971	Hypersaline Lake Sediment	MPITRREFDDSIDTLSAKVLKFLESHPNDAFGIEELAEAVGGGQLDVWAILDALKQRKQVSGKCVKGTGYYCLAK
Ga0180438_102703501	3300017971	Hypersaline Lake Sediment	KEFDDSIDTLSAKVLKFLESHPNDAFGIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAR
Ga0180438_113207221	3300017971	Hypersaline Lake Sediment	MPITRKEFDDTIDILSAKVLEFLKSHPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAR
Ga0180435_105456071	3300017992	Hypersaline Lake Sediment	MPITRKEFDDSIDTLSAKVLKFLESHPNDAFGIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAR
Ga0180433_102512782	3300018080	Hypersaline Lake Sediment	MPITRKEFDDSIDTLSDKVLKFLESHPSDAFELEELAQAVGGRQLEVWAILDTLKQRKQVSGKCVKGIGYYCIAK
Ga0224495_1000115612	3300022208	Sediment	MPITRREFDDSIDTLSAKVLKFLEAHPNDAFEIEELAEAVGARHLEVWAILDALKQRKQVSGKCVKGKGYYCIAK
Ga0224495_100022063	3300022208	Sediment	MPITRKEFDDSIDTLSAKVLKFLESNPNDAFEIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0224495_100022919	3300022208	Sediment	LPITRKQFDNSTDTLSAKVLGFLESNPDDAFELEELAEAVGGRQLEVWAILDELRRRKQVSGKCIKGTGYYCVAK
Ga0224495_100125352	3300022208	Sediment	MPITRKEFDDSIDTLSAKVLKFMESNPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0224495_100792962	3300022208	Sediment	MPITRKEFDDSIDTLSAKVLKFLEAHPNDAFEIEELAEAVGARQLEVWAILDALKQRKQVSGKCVKGKGYYCIAK
Ga0224495_101707492	3300022208	Sediment	LPITRKQFDNSPDTLPAKVLGFLESNPNDAFEVEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCIAK
Ga0224495_102714511	3300022208	Sediment	LPITRKQFDNSTDTLSAKVLRFLESKPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0224495_104234171	3300022208	Sediment	MPITRKEFDDSIDTLSAKLLRFLEANPNQAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGAGYYCIAK
Ga0224514_104023071	3300022217	Sediment	LPITRKQFDNSTDTLSAKVLRFLESKPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCLAK
Ga0224501_103415452	3300022223	Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPDDAFELEELAEAVGARQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0224507_100170453	3300022307	Sediment	LPITREQFDKNTDTLSEEVLRFLKSNADEAFDIEEIAKAVGGRQLEIWAILDDLKRRQQVSGKCIKGNGYYCVGK
Ga0224510_101242682	3300022309	Sediment	LPITRKQFDNSTDTLSAKVLRFLESDPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0224510_102868652	3300022309	Sediment	MPITRKEFDDSIDTLSAKVLKFMESNPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAE
Ga0224510_108446562	3300022309	Sediment	RKEFDDSIDTLSAKLLRFLEANPNQAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGAGYYCIAK
Ga0209498_10310763	3300025135	Sediment	MPIKRKVFDDSIDTLSAKVLEFLESHPDDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCVAK
Ga0209164_10293953	3300027690	Enrichment Culture	LPITRKEFDNSTDTLSARVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKQVSGKCIKGTGYYCLAK
Ga0214474_10390803	3300027740	Soil	MPITRKEFDDSIDTLSAKVLKFLESHPNDAFEIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0209635_106101301	3300027888	Marine Sediment	LPITRKEFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKQVSGKCIKGTGYYCLAK
Ga0209635_106132842	3300027888	Marine Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPDDAFELEEIAEAAGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0209635_107053821	3300027888	Marine Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPNDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGAGYYCVAK
Ga0209635_107315672	3300027888	Marine Sediment	MPITRKEFDDSIDTLSAKVLRFLEANPNQAFDIEELAEAVGGRQLEVWAILDALKQREQVSGKCVKGTGYYCIAK
Ga0209635_110141181	3300027888	Marine Sediment	MPITRKEFDDSIDTLTAKVLEFLESNPNDAFEIEELAEAVGGKQLEVWAILDALKQREQVSGKCIKGTGYYCIAR
Ga0209636_101576532	3300027893	Marine Sediment	MPITRKEFDDSLDTLSAKVLKFLESNPNDAFEIEELAKAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0209636_112805652	3300027893	Marine Sediment	EVLRFLKSNADEAFDIEEIAEAVGGRQLEVWAILDDLKRVKQVSGKCIKGNGYYCVGK
Ga0209777_1000141713	3300027896	Freshwater Lake Sediment	MPIPRKQFDKSIDTLSVKVLKFLKSHPDEAFEIEELAEAVGGRQLEVWAILDDLKRRKQVTGKCIKGKGYYCV
Ga0209253_101205402	3300027900	Freshwater Lake Sediment	MPITRKEFDDSIDTLSAKLLRFLEANPNQAFDTEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIVK
Ga0209253_101237183	3300027900	Freshwater Lake Sediment	MPITRKEFDDSIDTLSAKLLRFLEAHPNQAFDTEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0209253_102910523	3300027900	Freshwater Lake Sediment	MPIPRKQFDKSIDTLSVKVLKFLKSHPEEAFEIEELAEAVGGRQLEVWAILDDLKRRKQVTSKCIKGKGYYCV
Ga0209427_106374972	3300027901	Marine Sediment	SLDTLSAKVLKFLESNPNDAFEIEELAKAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0209427_106974581	3300027901	Marine Sediment	PITRKEFDNSTDTLSARVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKQVSGKCIKRTGYYCLAK
Ga0209536_1002434323	3300027917	Marine Sediment	MPITRREFDDSTDTLSAKVLRFLEENPNQAFDIDELAEAVGGRQLEVWAILDALKQRKQVSGKC
Ga0307925_1019124	3300030714	Soil	LPITRKEFDNSTDTLSAKVVRFLESNPDDAFELEELAEAMGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0315554_100114111	3300031255	Salt Marsh Sediment	LPITRKQFDNSTDTLSAKVLRFLESNLHDAFELEEIAEAVGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0315554_12023021	3300031255	Salt Marsh Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPNDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0315555_10781092	3300031257	Salt Marsh Sediment	LPITRKEFDNSTDTLSAKVVRFLESKPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0315555_11834712	3300031257	Salt Marsh Sediment	FLESNPDDAFELEELAEAVGGRQLKVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0315555_11876201	3300031257	Salt Marsh Sediment	MPITRREFDDSIDTLSARLLKFLESNPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAE
Ga0315555_12755572	3300031257	Salt Marsh Sediment	LESNPDDAFELEELAEAVGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0307442_10662382	3300031274	Salt Marsh	LPITRKQFDNSTDTLSARVLRFLESNPNDAFELEELAEAVGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0307437_11792421	3300031275	Salt Marsh	LPITRKQFDNSTDTLSAKVLRFLESNPHDAFELEEIAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0307431_10476632	3300031278	Salt Marsh	LPITRKQFDNSTDTLSAKVLRFLESNPNDAFELEELAEAVGGRQLEVWAILDDLKRREQVSGKCIKGMGYYCVAK
Ga0307431_11371262	3300031278	Salt Marsh	LPITRKQFDNSTDTLSAKVLRFLESNPDDAFELEELAEAVGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0307428_100047811	3300031280	Salt Marsh	LPITRKQFDNSTDTLSAKVLRFLESKPDDAFELEELAEAVGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0307439_10649392	3300031356	Salt Marsh	LPITRKQFDNSTDTLSAKVLRFLESNPNDAFELEELAEAVGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0307443_10196402	3300031365	Salt Marsh	LPITRKQFDNSTDTLSAKVLRFLESNPHDAFELEELAEAVGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0307443_10762122	3300031365	Salt Marsh	LPITRKQFDNSTDTLSAKVLRFLESNPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKC
Ga0307380_103477741	3300031539	Soil	NVLPITRKQFDNSTDTLSVKVLRFLESKPDDAFELEELAEAVGGRQLEVWAILDELKRRNQVSGKCIKGTGYYCVAK
Ga0315547_100032352	3300031553	Salt Marsh Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0315547_12518762	3300031553	Salt Marsh Sediment	LPITRKQFDNSTDTLSAKVVRFLESKPDDAFELEEIAEAVGGRQLEVWAILDDLKRRKQVSGKC
Ga0315544_10053604	3300031554	Salt Marsh Sediment	MPITRREFDDSIDTLSARLLKFLESNPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0307379_107853572	3300031565	Soil	LPITRKQFDNSTDTLSVKVLRFLESKPDDAFELEELAEAVGGRQLEVWAILDELKRRNQVSGKCIKGTGYYCVAK
Ga0307378_100152901	3300031566	Soil	DNSTDTLSAKVLRFLESNPNDAFELEELAEAVGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0315532_10070522	3300031575	Salt Marsh Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAKEARQSSI
Ga0307376_105801052	3300031578	Soil	LPITRKEFDNSMDTLSARVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRRKQVSGKCIKGTGYYCLAK
Ga0315552_10074229	3300031620	Salt Marsh Sediment	LPITRKEFDNSTDTLSAKVLRFLESNPNDAFELEELAEAAGGRQLEVWAILDELKRRKQVSGKCI
Ga0315552_10738681	3300031620	Salt Marsh Sediment	MPITRREFDDSIDTLSAKVLKFLESNPNDAFDIEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYC
Ga0315552_12251892	3300031620	Salt Marsh Sediment	FLESNPNDAFELEELAEAAGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0315533_10106453	3300031643	Salt Marsh Sediment	LPITRKQFDNSTDTLSAKVLRFLESNPDGAFELEELAEAVGGRQLEVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0315539_11707992	3300031650	Salt Marsh Sediment	LPITRKEFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGGRQLEVWAILDELKRQKQVSGKCIKGTGYYCVAK
Ga0315550_13265041	3300031653	Salt Marsh Sediment	KVLRFLESNPDDAFELEELAEAVGGRQLKVWAILDDLKRRKQVSGKCIKGTGYYCVAK
Ga0315549_11968781	3300031654	Salt Marsh Sediment	LSARVVRFLESNPDDAFELEELAEAVGSRQLEVWAILDELKRQKQVSGKCIKGTGYYCLA
Ga0315537_10102781	3300031698	Salt Marsh Sediment	LPITRKEFDNSTDTLSAKVVRFLESNPDDAFELEELAEAVGGRQLEVWAILDELKRQKQVSGKCIKGTGY
Ga0315537_12653571	3300031698	Salt Marsh Sediment	LPITRKEFDNSTDTLSAKVVRFLELNPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0315291_100049692	3300031707	Sediment	MPITRKDFDDSIDTLSAKVLRFLKANPNQAFDTEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0315291_100836993	3300031707	Sediment	MPIPRKQFDKSIDTLSAKVLKFLKSHPDEAFEIEELAEAVGGRPLEVWAILDDLKRRKQVTGKCIKGKGYYCV
Ga0315293_103620062	3300031746	Sediment	MPIPRKQFDKSIDTLSVKVLKFLKSHPEEAFEIQELAEAVGGRQLEVWAILDDLKRRKQVTSKCIKGKGYYCV
Ga0315297_107166042	3300031873	Sediment	MPITRKEFDDTIDTLSAKLLRFLEAHPNQAFDTEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0315285_101479044	3300031885	Sediment	DTLSAKVLKFLESNPNDAFEIEELAKAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0315294_102560903	3300031952	Sediment	LRFMEAHPNQAFDTEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0315294_103084611	3300031952	Sediment	SAKLLRFLEAHPNQAFDTEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0315289_115284161	3300032046	Sediment	MPITRKEFDDSIDTLSAKLLRFLEAHPNQAFDTEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKG
Ga0315551_101280292	3300032062	Salt Marsh Sediment	LPITRKEFDNSTDTLSAKVLRFLESNPNDAFELEELAEAAGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0315551_102947501	3300032062	Salt Marsh Sediment	TDTLSAKVVRFLELNPDDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0315551_103662291	3300032062	Salt Marsh Sediment	NSTDTLSAKVLRFLESNPNDAFELEELAEAVGGRQLEVWAILDELKRRKQVSGKCIKGTGYYCVAK
Ga0315277_100452852	3300032118	Sediment	MPITRKEFDDSIDTLSAKLLRFLEANPNQAFDTEELAETVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIVK
Ga0315277_112498122	3300032118	Sediment	RVLKFLQSNADEAFDIEELTEAVGGRQLEVWAILNEFRRKKQVSGKCIKGKGYYCVVK
Ga0315295_100715371	3300032156	Sediment	LEAHPNQAFDTEELAEAVGGRQLEVWAILDALKQRKQVSGKCVKGTGYYCIAK
Ga0315295_104370501	3300032156	Sediment	MPITRKEFDDSIDTLSAKLLRFLEAHPNQAFDTEELAEAVGGRQLEVWAILDALKHRKQVSGKCVKGTGYYCIAK
Ga0315281_100177957	3300032163	Sediment	MPIPRKRFDKSIDALSGEVLKFLKSHPDEAFEIDELAAAVGGRQLEVWAILDDLKRRKQVTGKCIKGKGYYCV
Ga0315286_107075291	3300032342	Sediment	SIDTLSVKVLKFLKSHPEEAFEIEELAEAVGGRQLEVWAILDDLKRRKQVTSKCIKGKGYYCV
Ga0315275_126510632	3300032401	Sediment	QFDKSIDTLSVKVLKFLKSHPEEAFEIEELAEAVGGRQLEVWAILDDLKRRKQVTSKCIKGKGYYCV
Ga0334965_0061984_188_415	3300033991	Sediment	MPITRKEFDDSIDTLSAKVLEFLEANPNDAFELKELTQAVGGRQLEVWAVLDALKQRKQVSGKCIKGTGYYCIVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053662

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences