Metagenome / Metatranscriptome Family F052174

Basic Information
Family ID	F052174
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	43 residues
Representative Sequence	VKATVFLGGGRITGALLAGLRLAGYGQPIVVHDRHAEK
Number of Associated Samples	130
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	54.93 %
% of genes near scaffold ends (potentially truncated)	99.30 %
% of genes from short scaffolds (< 2000 bps)	85.31 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Unclassified (67.832 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.888 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.042 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.18% β-sheet: 12.12% Coil/Unstructured: 69.70%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00202	Aminotran_3	60.14
PF13561	adh_short_C2	25.87
PF00106	adh_short	1.40
PF01266	DAO	0.70
PF00682	HMGL-like	0.70
PF02630	SCO1-SenC	0.70
PF00561	Abhydrolase_1	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.70

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.83 %
All Organisms	root	All Organisms	32.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.83 %
cellular organisms	root	All Organisms → cellular organisms	32.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1001220	All Organisms → cellular organisms → Bacteria	3876	Open in IMG/M
3300001661\|JGI12053J15887_10193584	Not Available	1039	Open in IMG/M
3300004082\|Ga0062384_100031000	All Organisms → cellular organisms → Bacteria	2413	Open in IMG/M
3300004082\|Ga0062384_100569150	Not Available	762	Open in IMG/M
3300005175\|Ga0066673_10226804	Not Available	1075	Open in IMG/M
3300005328\|Ga0070676_11199352	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005344\|Ga0070661_100170062	Not Available	1655	Open in IMG/M
3300005354\|Ga0070675_100844387	Not Available	838	Open in IMG/M
3300005436\|Ga0070713_102214347	Not Available	532	Open in IMG/M
3300005437\|Ga0070710_10090705	Not Available	1802	Open in IMG/M
3300005441\|Ga0070700_101486590	Not Available	575	Open in IMG/M
3300005454\|Ga0066687_10221322	Not Available	1043	Open in IMG/M
3300005529\|Ga0070741_10842896	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005542\|Ga0070732_10977148	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005561\|Ga0066699_10579749	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005591\|Ga0070761_10556817	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005598\|Ga0066706_11097525	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005602\|Ga0070762_10673499	Not Available	692	Open in IMG/M
3300005952\|Ga0080026_10258692	Not Available	526	Open in IMG/M
3300006059\|Ga0075017_100613869	Not Available	832	Open in IMG/M
3300006086\|Ga0075019_10600709	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300006162\|Ga0075030_101266190	Not Available	579	Open in IMG/M
3300006172\|Ga0075018_10273970	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300006794\|Ga0066658_10552874	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006852\|Ga0075433_10294882	Not Available	1436	Open in IMG/M
3300007788\|Ga0099795_10071550	Not Available	1310	Open in IMG/M
3300009143\|Ga0099792_10977543	Not Available	564	Open in IMG/M
3300009521\|Ga0116222_1489083	Not Available	538	Open in IMG/M
3300009545\|Ga0105237_10631758	Not Available	1078	Open in IMG/M
3300009628\|Ga0116125_1143427	Not Available	659	Open in IMG/M
3300009665\|Ga0116135_1175425	Not Available	810	Open in IMG/M
3300009683\|Ga0116224_10012182	All Organisms → cellular organisms → Bacteria → Proteobacteria	4307	Open in IMG/M
3300009698\|Ga0116216_10103487	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300009698\|Ga0116216_10731954	Not Available	594	Open in IMG/M
3300010043\|Ga0126380_11137067	Not Available	668	Open in IMG/M
3300010321\|Ga0134067_10471037	Not Available	516	Open in IMG/M
3300010335\|Ga0134063_10357073	Not Available	711	Open in IMG/M
3300010337\|Ga0134062_10017816	All Organisms → cellular organisms → Bacteria → Proteobacteria	2684	Open in IMG/M
3300010339\|Ga0074046_10012537	Not Available	6212	Open in IMG/M
3300010360\|Ga0126372_10046451	Not Available	2897	Open in IMG/M
3300010366\|Ga0126379_11129311	Not Available	890	Open in IMG/M
3300010379\|Ga0136449_102318253	Not Available	778	Open in IMG/M
3300010386\|Ga0136806_1435725	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300011269\|Ga0137392_10783050	Not Available	788	Open in IMG/M
3300011269\|Ga0137392_11247912	Not Available	602	Open in IMG/M
3300012189\|Ga0137388_10072847	All Organisms → cellular organisms → Bacteria → Proteobacteria	2868	Open in IMG/M
3300012208\|Ga0137376_10937937	Not Available	742	Open in IMG/M
3300012209\|Ga0137379_10800968	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012353\|Ga0137367_10833125	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012914\|Ga0157297_10356586	Not Available	571	Open in IMG/M
3300012944\|Ga0137410_10469371	Not Available	1024	Open in IMG/M
3300012955\|Ga0164298_11611294	Not Available	512	Open in IMG/M
3300012975\|Ga0134110_10283188	Not Available	712	Open in IMG/M
3300012986\|Ga0164304_10933703	Not Available	681	Open in IMG/M
3300012986\|Ga0164304_11340292	Not Available	585	Open in IMG/M
3300013102\|Ga0157371_10560072	Not Available	848	Open in IMG/M
3300013306\|Ga0163162_10851130	Not Available	1027	Open in IMG/M
3300014654\|Ga0181525_10819458	Not Available	526	Open in IMG/M
3300015241\|Ga0137418_10101337	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300015245\|Ga0137409_10871667	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300015261\|Ga0182006_1026090	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300017943\|Ga0187819_10792272	Not Available	532	Open in IMG/M
3300017944\|Ga0187786_10390381	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	601	Open in IMG/M
3300017973\|Ga0187780_10579257	Not Available	805	Open in IMG/M
3300018058\|Ga0187766_10272187	Not Available	1089	Open in IMG/M
3300018058\|Ga0187766_10788769	Not Available	663	Open in IMG/M
3300018085\|Ga0187772_10497654	Not Available	859	Open in IMG/M
3300018086\|Ga0187769_10754215	Not Available	736	Open in IMG/M
3300018088\|Ga0187771_11418900	Not Available	589	Open in IMG/M
3300018468\|Ga0066662_10088122	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300020001\|Ga0193731_1141802	Not Available	597	Open in IMG/M
3300020579\|Ga0210407_10368529	Not Available	1124	Open in IMG/M
3300020580\|Ga0210403_10331064	Not Available	1246	Open in IMG/M
3300020580\|Ga0210403_11019870	Not Available	647	Open in IMG/M
3300021086\|Ga0179596_10293441	Not Available	810	Open in IMG/M
3300021088\|Ga0210404_10263207	Not Available	941	Open in IMG/M
3300021171\|Ga0210405_11184297	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300021180\|Ga0210396_11314851	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300021344\|Ga0193719_10020634	All Organisms → cellular organisms → Bacteria → Proteobacteria	2816	Open in IMG/M
3300021402\|Ga0210385_10354685	Not Available	1096	Open in IMG/M
3300021404\|Ga0210389_10942037	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300021405\|Ga0210387_10282628	Not Available	1457	Open in IMG/M
3300021405\|Ga0210387_10996938	Not Available	734	Open in IMG/M
3300021406\|Ga0210386_11071644	Not Available	685	Open in IMG/M
3300021420\|Ga0210394_10552099	Not Available	1013	Open in IMG/M
3300021420\|Ga0210394_10896950	Not Available	771	Open in IMG/M
3300021432\|Ga0210384_11075290	Not Available	707	Open in IMG/M
3300021479\|Ga0210410_11018764	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300021479\|Ga0210410_11713575	Not Available	522	Open in IMG/M
3300021560\|Ga0126371_10646328	Not Available	1206	Open in IMG/M
3300023255\|Ga0224547_1033436	Not Available	663	Open in IMG/M
3300024330\|Ga0137417_1278006	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300025898\|Ga0207692_10071061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1834	Open in IMG/M
3300025904\|Ga0207647_10185065	Not Available	1208	Open in IMG/M
3300025911\|Ga0207654_10784642	Not Available	688	Open in IMG/M
3300025914\|Ga0207671_10353964	Not Available	1165	Open in IMG/M
3300025914\|Ga0207671_10464596	Not Available	1008	Open in IMG/M
3300025927\|Ga0207687_10142387	All Organisms → cellular organisms → Bacteria	1820	Open in IMG/M
3300025933\|Ga0207706_10409316	Not Available	1175	Open in IMG/M
3300025935\|Ga0207709_11145698	Not Available	640	Open in IMG/M
3300026075\|Ga0207708_11294474	Not Available	638	Open in IMG/M
3300026116\|Ga0207674_11054197	Not Available	782	Open in IMG/M
3300026305\|Ga0209688_1059230	Not Available	702	Open in IMG/M
3300026308\|Ga0209265_1012413	All Organisms → cellular organisms → Bacteria → Proteobacteria	2653	Open in IMG/M
3300026325\|Ga0209152_10020780	All Organisms → cellular organisms → Bacteria → Proteobacteria	2243	Open in IMG/M
3300026326\|Ga0209801_1293649	Not Available	582	Open in IMG/M
3300026538\|Ga0209056_10592066	Not Available	560	Open in IMG/M
3300026552\|Ga0209577_10488321	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300027466\|Ga0207484_101733	Not Available	918	Open in IMG/M
3300027497\|Ga0208199_1076469	Not Available	701	Open in IMG/M
3300027562\|Ga0209735_1074433	Not Available	735	Open in IMG/M
3300027568\|Ga0208042_1058192	Not Available	985	Open in IMG/M
3300027576\|Ga0209003_1058301	Not Available	696	Open in IMG/M
3300027587\|Ga0209220_1152797	Not Available	596	Open in IMG/M
3300027633\|Ga0208988_1058674	Not Available	976	Open in IMG/M
3300027641\|Ga0208827_1054296	Not Available	1327	Open in IMG/M
3300027674\|Ga0209118_1021218	All Organisms → cellular organisms → Bacteria → Proteobacteria	2067	Open in IMG/M
3300027826\|Ga0209060_10179830	Not Available	977	Open in IMG/M
3300027855\|Ga0209693_10474955	Not Available	600	Open in IMG/M
3300027875\|Ga0209283_10753695	Not Available	603	Open in IMG/M
3300027879\|Ga0209169_10072367	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300027905\|Ga0209415_10008619	All Organisms → cellular organisms → Bacteria → Acidobacteria	17668	Open in IMG/M
3300027908\|Ga0209006_10896091	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300028711\|Ga0307293_10261254	Not Available	550	Open in IMG/M
3300028746\|Ga0302233_10234900	Not Available	697	Open in IMG/M
3300028828\|Ga0307312_10215478	Not Available	1236	Open in IMG/M
3300028906\|Ga0308309_10070074	All Organisms → cellular organisms → Bacteria → Acidobacteria	2611	Open in IMG/M
3300029636\|Ga0222749_10285768	Not Available	849	Open in IMG/M
3300031715\|Ga0307476_10334511	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300031718\|Ga0307474_11261219	Not Available	584	Open in IMG/M
3300032160\|Ga0311301_12155863	Not Available	642	Open in IMG/M
3300032180\|Ga0307471_100954084	Not Available	1025	Open in IMG/M
3300032421\|Ga0310812_10150683	Not Available	988	Open in IMG/M
3300032805\|Ga0335078_12181300	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300032829\|Ga0335070_10143564	All Organisms → cellular organisms → Bacteria	2437	Open in IMG/M
3300032892\|Ga0335081_11184434	Not Available	872	Open in IMG/M
3300032955\|Ga0335076_10167551	All Organisms → cellular organisms → Bacteria → Proteobacteria	2108	Open in IMG/M
3300033158\|Ga0335077_10085319	All Organisms → cellular organisms → Bacteria	3739	Open in IMG/M
3300033158\|Ga0335077_10110809	All Organisms → cellular organisms → Bacteria	3206	Open in IMG/M
3300033158\|Ga0335077_10376132	Not Available	1533	Open in IMG/M
3300033412\|Ga0310810_10968537	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300033475\|Ga0310811_10628716	Not Available	1067	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.11%
Host-Associated	Host-Associated	11.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.42%
Plants	Host-Associated → Plants	11.89%
Aquatic	Environmental → Aquatic	7.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Freshwater	Environmental → Aquatic → Freshwater	4.90%
Sediment	Environmental → Aquatic → Sediment	2.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%
Peat	Environmental → Terrestrial → Peat	1.40%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.24%
Loam	Environmental → Terrestrial → Soil → Loam	12.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.40%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.10%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.40%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.70%
Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage	0.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.10%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.40%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.70%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage → Sediment	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.70%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.70%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.70%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010386	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M8 kmer 63	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027466	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK03-B (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10012201	3300000546	Quercus Rhizosphere	VKRVTFLGGGRITSALIAGLRXAKFDKQIVVHDRHPEKLK
JGI12053J15887_101935841	3300001661	Forest Soil	MKNARKNAMIFLGGGRITGALLAGLRLAGYSRPIVVHDRHP
Ga0062384_1000310004	3300004082	Bog Forest Soil	MKATVFLGGGRITSALISGLRLAKYEAPIVVYDRHVQKLRQLKKLYG
Ga0062384_1005691501	3300004082	Bog Forest Soil	VKAGSGGKATVFLGGGRITGALVAGLRLAKYDRPIVVHDRN
Ga0066673_102268042	3300005175	Soil	MKGSRAEATVFLCGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQYG
Ga0070676_111993522	3300005328	Miscanthus Rhizosphere	MKATVFLGGGRITTALIAGLRLARYPTPIVVHDRHPERLRRLRR
Ga0070661_1001700621	3300005344	Corn Rhizosphere	MKAVRNNAVVFLGGGRITSALLAGLRLAGFRQPVVVHDHNPHKLRQLK
Ga0070675_1008443871	3300005354	Miscanthus Rhizosphere	MKAVRNNAVVFLGGGRITSALLAGLRLAGFRQPVVVHDHNPHKLRQLKR
Ga0070713_1022143472	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKAARKHAIVFLGGGRITGALLAGLRLTNYDQPIVVHDRHPQKL
Ga0070710_100907054	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKATVFLGGGRITGALCAGLRLAGDHREIVVHDRHPEKLNA
Ga0070700_1014865902	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKAVRTNAAVFLGGGRITSALLAGLRLAGFRQPVVVHDHNPHKLRQLKRQY
Ga0066687_102213221	3300005454	Soil	MKSTMFLGGGRITGALLAGLRLAKNKTPILVHDRNEHKLRALE
Ga0070741_108428961	3300005529	Surface Soil	MRRTMKATVFLGGGRITSALVSGLRLSAYSAPIIVFDRHAAKLLRLQRAFDVIPET
Ga0070732_109771481	3300005542	Surface Soil	LRGDLVFLGGGRITTALLSGLRQAKFRGSIVVHDRNLHKLAQ
Ga0066699_105797491	3300005561	Soil	MKATVFLGGGRITTALIAGLRRARYRSPIVVHDRHPERL
Ga0070761_105568172	3300005591	Soil	MSSTVFLGGGRITSALVAGLRRAGHKGVIVVHDRNAEK
Ga0066706_110975252	3300005598	Soil	MRGTRVKATVFLGGGRITSALVAGLRAAGCREPIVVLDRHPSKLRLLE
Ga0070762_106734992	3300005602	Soil	MKATVFLGGGRITGAMVAGLRLAKYPRQLVVYDRHLERLRALQRESQVE
Ga0080026_102586921	3300005952	Permafrost Soil	MKAARQNAIVFLGGGRITGALLAGLHLAGHDGPIVVHDRHPHKLHQLRVQHSVKI
Ga0075017_1006138691	3300006059	Watersheds	MKVTHESAHMKAARRNAAVFLGGGRITGALLAGLRLAGYNEPIVVHDRHAGKLKQLRRQY
Ga0075019_106007091	3300006086	Watersheds	MRRARKHAVVFLGGGRITGALLAGLHLADYDEPIVVHDRHPQKLRQLRV
Ga0075030_1012661901	3300006162	Watersheds	VTATVFLGGGRITAALIAGLRLAGDKTPIVVHDRNPYKLRALNRE
Ga0075018_102739701	3300006172	Watersheds	VKTGYGVKATVFLGGGRITSALVAGLRLTKYDKPIVVHDRNPGRLRQLKEQY
Ga0066658_105528742	3300006794	Soil	VKTTVFLGGGRITGVLLAGLRLAGYKEPVVVHDRHPRKL
Ga0075433_102948821	3300006852	Populus Rhizosphere	MKTTVFLGGGRITSALVAGLRLAGYEPPIVVHDRHSRKLKE
Ga0099795_100715502	3300007788	Vadose Zone Soil	VKGIVFLGGGRITSALIAGLRLAKYGESIVVHDRHSKKL
Ga0099792_109775431	3300009143	Vadose Zone Soil	VKATVFLGGGRITGALVAGLRLASFSQPIVVHDRNSEKLRQL
Ga0116222_14890831	3300009521	Peatlands Soil	LKTGSDLRATVFLGGGCITSALVAGLRLAKYEKPIV
Ga0105237_106317582	3300009545	Corn Rhizosphere	MKAARKHAIVFLGGGRITGALLAGLRLTDYDQPIVVHDRHPQ
Ga0116125_11434272	3300009628	Peatland	VKATVFLGGGRITSALVAGLRLAKYRRPIVVYDRHSKKLQQLKRQYGVI
Ga0116135_11754251	3300009665	Peatland	LRATVFLGGGRITNALVAGLRLAKYDKPIVVHDRNPSKLRQL
Ga0116224_100121826	3300009683	Peatlands Soil	VRATVFLGGGRITAALIAGLRLAKYDRPIIVHDRNPS
Ga0116216_101034871	3300009698	Peatlands Soil	MRTGVKATVFLGGGRITSALIAGLRLAKYDQPIIVHDRNPRKLR
Ga0116216_107319541	3300009698	Peatlands Soil	MKATVFLGGGHITGALAAGLRLAGYDGEIVVYDLHPEKLRALRRESRVEMVRDLK
Ga0126380_111370671	3300010043	Tropical Forest Soil	MKAIVFLGGGRITGALCAGLRLAGDRREILVYDRNAE
Ga0134067_104710372	3300010321	Grasslands Soil	MKGSRAEATVFLGGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQY
Ga0134063_103570732	3300010335	Grasslands Soil	MKGSRAEATVFLGGGRITSALVAGLRLSGYGQPIIVHDRHAQKL
Ga0134062_100178163	3300010337	Grasslands Soil	MKGSRAEATVFLCGGRITSALVAGLRLSGYGQPIIVHDRH
Ga0074046_100125375	3300010339	Bog Forest Soil	VAKAPVKSTVFLGAGRITSALVAGLRLAKYARPIVVYDR
Ga0126372_100464514	3300010360	Tropical Forest Soil	VKAIVFLGGGRITSALVAGLRLGKYRAPVIVHDRNPHKLRDLKKK
Ga0126379_111293112	3300010366	Tropical Forest Soil	MKATVFLGAGRITAALIAGLRLAKYANPILVHDRHAE
Ga0136449_1023182531	3300010379	Peatlands Soil	MMATVFLGAGRITSALLAGLRLAKYDGPILVHDHNPEKLRR
Ga0136806_14357251	3300010386	Sediment	VKTTVFLGGGRITSALIAGLRLAKYKGPIVVHDRHPRKLRQLKRR
Ga0137392_107830501	3300011269	Vadose Zone Soil	VKRTGVKVLVFLGGGRITGALVAGLRRAGYNKPIVVHDRHPHKLRQ
Ga0137392_112479121	3300011269	Vadose Zone Soil	VKATVFLGGGRITSALVAGLRLAKYGPPIVVHDRHFKKLQEL
Ga0137388_100728474	3300012189	Vadose Zone Soil	MKTARANTTVFLGGGRITGALLAGLRLTGYDQPIVVHDRHPAKLRQLRRDHGVS
Ga0137376_109379372	3300012208	Vadose Zone Soil	MKGSRAEATVFLCGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQYGV
Ga0137379_108009681	3300012209	Vadose Zone Soil	MNVIVFLGGGRITSALVAGLRLAEYDGEIVVYDRNPGKVRAL
Ga0137367_108331252	3300012353	Vadose Zone Soil	MKATVFLGGGRITGALAAGLRLARSKASLVVYDRNPEKVRALR
Ga0157297_103565862	3300012914	Soil	MKAVRNNAVVFLGGGRITSALLAGLRLAGFRQPVVVHD
Ga0137410_104693712	3300012944	Vadose Zone Soil	MKAAHANTIVFLGGGRITGALLAGLRLVGYDRPLVV
Ga0164298_116112941	3300012955	Soil	VKATVFLGGGRITAALIAGLRLAKYRAPVIVHDRNPHKLRALKKKFG
Ga0134110_102831882	3300012975	Grasslands Soil	MKGSRAEATVFLGGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQ
Ga0164304_109337032	3300012986	Soil	MKAVRKHAVVFLGGGRITSALLAGLRLAVFRRPVV
Ga0164304_113402922	3300012986	Soil	VKATVFLGGGRITAALIAGLRLAKYRAPVIVHDRNPHKLRALK
Ga0157371_105600721	3300013102	Corn Rhizosphere	MKAVRTNAAVFLGGGRITSALLAGLRLAGFRQPVVVHDHNPHKLRQLKR
Ga0163162_108511302	3300013306	Switchgrass Rhizosphere	MKATVFLGGGRITTALTAGLRLAHYPTSIVVHDRHPE
Ga0181525_108194582	3300014654	Bog	VKATVFLGGGRITSALVAGLRLAGYRHPIVVHDRNLE
Ga0137418_101013371	3300015241	Vadose Zone Soil	MVFLGGGRITKALIAGLRLAGDKTPIVVHDRNAHKLRALQ
Ga0137409_108716672	3300015245	Vadose Zone Soil	MRTSATVFLGGGRITSAMAAGLRLAGYREEIVVYDRHPEKL
Ga0182006_10260904	3300015261	Rhizosphere	MKATVFLGGGRITTALIAGLRLAHYPTSIVVHDRHPELLRRLRR
Ga0187819_107922722	3300017943	Freshwater Sediment	VKAIVFLGGGRITAALVAGLRLAGYGQPIVVHDRHARKL
Ga0187786_103903811	3300017944	Tropical Peatland	MTTVFIGGGRITSALLAGLRLTSYKQPLIVHDRNAHKLRSLKRDFHV
Ga0187780_105792571	3300017973	Tropical Peatland	MKTTVFLGGGRITGALLAGLRLAKYPWPLVVYDHHPEKLRRLKQHYGVTAER
Ga0187766_102721872	3300018058	Tropical Peatland	MKATVFLGGGRITGALVGGLRLANHAGPLLVYDRHPEKLRQLKNRYRVSVEA
Ga0187766_107887692	3300018058	Tropical Peatland	VKANATVFLGGGRITGALLAGLKLAGYKSPIIVHDRNP
Ga0187772_104976542	3300018085	Tropical Peatland	MNSTLFLGAGRITSALAAGLRLAGDERRIIAYDRHPEK
Ga0187769_107542152	3300018086	Tropical Peatland	MKAIVFVGGGRITSALLAGLRLANFRGSLLVYDRHPEKLRRLGRH
Ga0187771_114189001	3300018088	Tropical Peatland	MKSTVFLGGGRITSALVAGLRLAKYRQPIVGYDINPQKLRALRSEFRVGI
Ga0066662_100881223	3300018468	Grasslands Soil	VHEINVKRTREKAIVFLGGGRITGALVAGLRLAGYHKPIVVHDR
Ga0193731_11418022	3300020001	Soil	MKATVFLGGGRITGAMIAGLRRAHYSTPIVVHDRHAAKLR
Ga0210407_103685292	3300020579	Soil	MEAIVFLGGGRITNALVAGLRLAKYDKPIIVHDRNPGKLR
Ga0210403_103310641	3300020580	Soil	VKATVFLGGGRITAALLAGLRLANYRSPIVVHDRNPHKLRALQKE
Ga0210403_110198701	3300020580	Soil	MKATVFLGGGRITGALAAGLRLAGYEREIVFYDRNP
Ga0179596_102934412	3300021086	Vadose Zone Soil	MKAAHANTIVFLGGGRITGALLAGLRLVGYDRPLVVHDRHPSKLRQ
Ga0210404_102632072	3300021088	Soil	MKNARNNAIVFLGGGRITGALLAGLRLAGYSQPIVV
Ga0210405_111842971	3300021171	Soil	MKATVFLGGGHITGAMAAGLRLAGFEGAMVAYDRHPEKVRALR
Ga0210396_113148512	3300021180	Soil	MRTNATVFLGGGRITSAMAAGLRLAGYDEEIVVYD
Ga0193719_100206344	3300021344	Soil	MKAAGTKAARGRTTVFLGGGRITGALLAGLRLAGYD
Ga0210385_103546852	3300021402	Soil	VKATVFLGGGRITGALVAGLRLAGYDRPIVVHDWHAEKLKKLKRQYGV
Ga0210389_109420371	3300021404	Soil	MKATVFLGGGHITGALAAGLRLAGFSGEIVVYDRYP
Ga0210387_102826282	3300021405	Soil	MQEIVFLGGGRITNALVAGLRLAKYDKPIIVHDRN
Ga0210387_109969381	3300021405	Soil	MKTARKDAVVFLGGGRITGALLAGLNLAQYDEPVVV
Ga0210386_110716442	3300021406	Soil	MKAPVFLGGGRITGALLAGLRLAKYDQPIVVHDRH
Ga0210394_105520992	3300021420	Soil	VKATVFLGGGRITSALVAGLRLAKYAAPVVVYDRHPQKLRQLKR
Ga0210394_108969502	3300021420	Soil	MKPTVFLGGGRITNAFLAGLRLAKYHKPILVYDRHPS
Ga0210384_110752902	3300021432	Soil	MKAARNDAVVFVGGGRITAALLAGLRLAQYDGPVIVHDRHRSKLTEL
Ga0210410_110187641	3300021479	Soil	MRKAILFLGGGHITGALAAGLRLAGFGGEIVVYDRHPEKVRA
Ga0210410_117135752	3300021479	Soil	MKAARNDAVVFVGGGRITAALLAGLRLAQYDGPVIVHDRHRSKLTE
Ga0126371_106463282	3300021560	Tropical Forest Soil	MKSGAGMKRIVFLGGGRITNALLAGLHRAGYKAPIVV
Ga0224547_10334361	3300023255	Soil	MLGTLVKATVFLGGGRITSVLVAGLRLADYDQPIVVH
Ga0137417_12780062	3300024330	Vadose Zone Soil	MTATVFLGGGRITSALVAGLRLAKYKPPLVVYDRHPEKLRQLKREFNV
Ga0207692_100710613	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKSTVFLGGGRITGALISGLRLAAYEQPIIVHDRHAAKMR
Ga0207647_101850651	3300025904	Corn Rhizosphere	MKATVFLGGGRITTALIAGLRLAHYPTSIVVHDRHPELLRRLRREYSVFIDPDLHHAV
Ga0207654_107846421	3300025911	Corn Rhizosphere	MKAVRTNAAVFLGGGRITSALLAGLRLAGFRQPVVVHDH
Ga0207671_103539642	3300025914	Corn Rhizosphere	MKATVFLGGGRITTALIAGLRLAHYPTPIVVHDRHPELLRRLRRQYP
Ga0207671_104645961	3300025914	Corn Rhizosphere	MKAARKHAIVFLGGGRITGALLAGLRLTDYDQPIVVH
Ga0207687_101423871	3300025927	Miscanthus Rhizosphere	MKAARKHAIVFLGGGRITGALLAGLRLTNYDQPIVVH
Ga0207706_104093162	3300025933	Corn Rhizosphere	MKATVFLGGGRITTALIAGLRLAHYPTSIVVHDRHPELL
Ga0207709_111456982	3300025935	Miscanthus Rhizosphere	MKAVRNNAVVFLGGGRITSALLAGLRLAGFRQPVVV
Ga0207708_112944741	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKAVRTNAAVFLGGGRITSALLAGLRLAGFRQPVVVHDHNPHKLRQLKRQYD
Ga0207674_110541972	3300026116	Corn Rhizosphere	MKATVFLGGGRITTALIAALRLAHYPTSIVVHDRHPELLRRLRR
Ga0209688_10592302	3300026305	Soil	MKGSRAEATVFLCGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQYGVV
Ga0209265_10124131	3300026308	Soil	MKGSRAEATVFLCGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLK
Ga0209152_100207803	3300026325	Soil	VKAIVFLGGGRITSALVAGLRQAGSKVSMVVYDRHP
Ga0209152_101533982	3300026325	Soil	VRRNKPILFVGGGRITSALCAGLRLGKYSREIVVYDRNPDKLR
Ga0209801_12936492	3300026326	Soil	MKGSRAEATVFLGGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQYG
Ga0209056_105920661	3300026538	Soil	VKATVFIGGGRITGALLAGLRLSGYKTPIIVHDRHASKLRQL
Ga0209577_104883213	3300026552	Soil	MVQKNTLKRATVFLGGGRITSALIAGLRLVGYQREIVVYDRNPARLRAL
Ga0207484_1017331	3300027466	Soil	MKATVFLGGGRITTALIAGLRLAHYPTPIVVHDRHPELLRRLRRQYS
Ga0208199_10764692	3300027497	Peatlands Soil	MRATVFLGGGRITGALIAGLRLAGYKPTIVVHDRNPEKV
Ga0209735_10744331	3300027562	Forest Soil	VSTTVFLGGGRITSALVAGLCRVGHKGVIVVHDRNAEKLRA
Ga0208042_10581921	3300027568	Peatlands Soil	VKATVFLGGGRITGALLAGLRLAGYGQPIVVHDRHAEK
Ga0209003_10583011	3300027576	Forest Soil	VKATVFLGGGRITAALLAGLRLANYRSPIVVHDRN
Ga0209220_11527971	3300027587	Forest Soil	VKATVFVGGGRITAALLAGLHLARDHKSILVYDRHPEKLRRLKRLYGV
Ga0208988_10586742	3300027633	Forest Soil	MKATVFLGAGRITGALVAGLHLGGYKRPIIVYDRNPKKLS
Ga0208827_10542961	3300027641	Peatlands Soil	LRATVFLGGGRITGALVAGLRLAKYDKPIIVHDRNPKKLGQLK
Ga0209118_10212183	3300027674	Forest Soil	MKAIVFLGGGRITSALVAGLRLASYRKPIVVHDRNSGKLKTLKRQYGVVV
Ga0209060_101798302	3300027826	Surface Soil	VILKPRAKATVFLGGGRITSALIAGLRLANYDKPI
Ga0209693_104749552	3300027855	Soil	MKAIVFLGGGRITNALVAGLRLAKYGKPTLVHDRNPGKLRQLKKQY
Ga0209283_107536952	3300027875	Vadose Zone Soil	MKTARANTTVFLGGGRITGALLAGLRLTGYDQPIVVHDRHPAKLRQLHRDYG
Ga0209169_100723673	3300027879	Soil	VKATVFLGGGRITGALLAGLRLAGYDQPIVVHDRHARKLEQLK
Ga0209415_1000861918	3300027905	Peatlands Soil	LRATVFLGGGRITGALVAGLRLAKYDKPIIVHDRNP
Ga0209006_108960912	3300027908	Forest Soil	MKATVFLGGGHITGAMAAGLRLAGFEGAMVAYDRHPEKVRALRRESR
Ga0307293_102612541	3300028711	Soil	MKATVFLGGGRITGAMIAGLRRAHYSTPIVVHDRHA
Ga0302233_102349002	3300028746	Palsa	MKAQATVFLGGGRITGALIAGLRLAGYRRAIVVHDRNAGKLRALRRE
Ga0307312_102154781	3300028828	Soil	MKATVFLGGGRITGAMIAGLRRAHYSTPIVVHDRHAAKL
Ga0308309_100700744	3300028906	Soil	MQTKATVFLGGGRITGALIAGLRLAGYDGRIVVHDHNSGKLR
Ga0222749_102857682	3300029636	Soil	VKATVFLGGGRITSALVAGLRLAGYDRPIVVHDRHAEKLRTLKR
Ga0307476_103345111	3300031715	Hardwood Forest Soil	MNTTVFVGGGRITSALIAGLRRARYRGMIVVHDRNAEKLQ
Ga0307474_112612192	3300031718	Hardwood Forest Soil	MKATVFLGGGRITGALAAGLRLAGYEREIVVYDRNP
Ga0311301_121558632	3300032160	Peatlands Soil	VTSAKAAVFLGGGRITSALVAGLRLAGYEREIVVYDRNPEKMPA
Ga0307471_1009540842	3300032180	Hardwood Forest Soil	VKGSRAEATVFLGGGRITSALIAGLRLSGYEQPIVVHDSNVQKLRKLKR
Ga0310812_101506831	3300032421	Soil	MKATVFLGGGRITGALLSGLRLAGYSQPIVVHDRHAAKLRQLQ
Ga0335078_121813001	3300032805	Soil	VAVRNKQATVFLGGGRITSAMVAGLRLAGDRREIVVYDRNPD
Ga0335070_101435641	3300032829	Soil	MSTAVFLGGGRITTALLAGLRGAGYRTPIVVHDRNPGKLRDLKRK
Ga0335081_111844341	3300032892	Soil	MRTTVFLGGGRITAALLAGLRLAKYPARLVVYDHH
Ga0335076_101675511	3300032955	Soil	VKPIVFLGGGRITAALLAGLQLARYRRPILVYDRHPSKLRQL
Ga0335077_100853191	3300033158	Soil	MSATVFLGGGRITAALVAGLRGAGFRGRIVVHDRNPAK
Ga0335077_101108096	3300033158	Soil	VNERAKDAVAFLGGGRITSALTAGLRLSGFRERIVVYD
Ga0335077_103761322	3300033158	Soil	MKATVFIGGGRITRALLAGLRLAKYRGSLLVYDRHPQKL
Ga0310810_109685372	3300033412	Soil	MKATVFLGGGRITGALAAGLRLAGDRCEIVVYDRHPEK
Ga0310811_106287161	3300033475	Soil	VKSTVFLGGGRITSALIAGLQLAKYKTPIVVHDRH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052174

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign