Metagenome / Metatranscriptome Family F052174

Basic Information
Family ID	F052174
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	43 residues
Representative Sequence	VKATVFLGGGRITGALLAGLRLAGYGQPIVVHDRHAEK
Number of Associated Samples	130
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	54.93 %
% of genes near scaffold ends (potentially truncated)	99.30 %
% of genes from short scaffolds (< 2000 bps)	85.31 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (67.832 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.888 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.042 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1LJNas_10012201 2JGI12053J15887_101935841 3Ga0062384_1000310004 4Ga0062384_1005691501 5Ga0066673_102268042 6Ga0070676_111993522 7Ga0070661_1001700621 8Ga0070675_1008443871 9Ga0070713_1022143472 10Ga0070710_100907054 11Ga0070700_1014865902 12Ga0066687_102213221 13Ga0070741_108428961 14Ga0070732_109771481 15Ga0066699_105797491 16Ga0070761_105568172 17Ga0066706_110975252 18Ga0070762_106734992 19Ga0080026_102586921 20Ga0075017_1006138691 21Ga0075019_106007091 22Ga0075030_1012661901 23Ga0075018_102739701 24Ga0066658_105528742 25Ga0075433_102948821 26Ga0099795_100715502 27Ga0099792_109775431 28Ga0116222_14890831 29Ga0105237_106317582 30Ga0116125_11434272 31Ga0116135_11754251 32Ga0116224_100121826 33Ga0116216_101034871 34Ga0116216_107319541 35Ga0126380_111370671 36Ga0134067_104710372 37Ga0134063_103570732 38Ga0134062_100178163 39Ga0074046_100125375 40Ga0126372_100464514 41Ga0126379_111293112 42Ga0136449_1023182531 43Ga0136806_14357251 44Ga0137392_107830501 45Ga0137392_112479121 46Ga0137388_100728474 47Ga0137376_109379372 48Ga0137379_108009681 49Ga0137367_108331252 50Ga0157297_103565862 51Ga0137410_104693712 52Ga0164298_116112941 53Ga0134110_102831882 54Ga0164304_109337032 55Ga0164304_113402922 56Ga0157371_105600721 57Ga0163162_108511302 58Ga0181525_108194582 59Ga0137418_101013371 60Ga0137409_108716672 61Ga0182006_10260904 62Ga0187819_107922722 63Ga0187786_103903811 64Ga0187780_105792571 65Ga0187766_102721872 66Ga0187766_107887692 67Ga0187772_104976542 68Ga0187769_107542152 69Ga0187771_114189001 70Ga0066662_100881223 71Ga0193731_11418022 72Ga0210407_103685292 73Ga0210403_103310641 74Ga0210403_110198701 75Ga0179596_102934412 76Ga0210404_102632072 77Ga0210405_111842971 78Ga0210396_113148512 79Ga0193719_100206344 80Ga0210385_103546852 81Ga0210389_109420371 82Ga0210387_102826282 83Ga0210387_109969381 84Ga0210386_110716442 85Ga0210394_105520992 86Ga0210394_108969502 87Ga0210384_110752902 88Ga0210410_110187641 89Ga0210410_117135752 90Ga0126371_106463282 91Ga0224547_10334361 92Ga0137417_12780062 93Ga0207692_100710613 94Ga0207647_101850651 95Ga0207654_107846421 96Ga0207671_103539642 97Ga0207671_104645961 98Ga0207687_101423871 99Ga0207706_104093162 100Ga0207709_111456982 101Ga0207708_112944741 102Ga0207674_110541972 103Ga0209688_10592302 104Ga0209265_10124131 105Ga0209152_100207803 106Ga0209152_101533982 107Ga0209801_12936492 108Ga0209056_105920661 109Ga0209577_104883213 110Ga0207484_1017331 111Ga0208199_10764692 112Ga0209735_10744331 113Ga0208042_10581921 114Ga0209003_10583011 115Ga0209220_11527971 116Ga0208988_10586742 117Ga0208827_10542961 118Ga0209118_10212183 119Ga0209060_101798302 120Ga0209693_104749552 121Ga0209283_107536952 122Ga0209169_100723673 123Ga0209415_1000861918 124Ga0209006_108960912 125Ga0307293_102612541 126Ga0302233_102349002 127Ga0307312_102154781 128Ga0308309_100700744 129Ga0222749_102857682 130Ga0307476_103345111 131Ga0307474_112612192 132Ga0311301_121558632 133Ga0307471_1009540842 134Ga0310812_101506831 135Ga0335078_121813001 136Ga0335070_101435641 137Ga0335081_111844341 138Ga0335076_101675511 139Ga0335077_100853191 140Ga0335077_101108096 141Ga0335077_103761322 142Ga0310810_109685372 143Ga0310811_106287161
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72 1LJNas_10012201 2JGI12053J15887_101935841 3Ga0062384_1000310004 4Ga0062384_1005691501 5Ga0066673_102268042 6Ga0070676_111993522 7Ga0070661_1001700621 8Ga0070710_100907054 9Ga0066687_102213221 10Ga0070741_108428961 11Ga0070732_109771481 12Ga0070761_105568172 13Ga0066706_110975252 14Ga0070762_106734992 15Ga0080026_102586921 16Ga0075017_1006138691 17Ga0075019_106007091 18Ga0075030_1012661901 19Ga0075018_102739701 20Ga0066658_105528742 21Ga0099795_100715502 22Ga0099792_109775431 23Ga0116222_14890831 24Ga0116224_100121826 25Ga0116216_107319541 26Ga0074046_100125375 27Ga0126372_100464514 28Ga0136449_1023182531 29Ga0137392_107830501 30Ga0137388_100728474 31Ga0137379_108009681 32Ga0137367_108331252 33Ga0137410_104693712 34Ga0164304_109337032 35Ga0137409_108716672 36Ga0187786_103903811 37Ga0187780_105792571 38Ga0187766_102721872 39Ga0187766_107887692 40Ga0187772_104976542 41Ga0187769_107542152 42Ga0187771_114189001 43Ga0066662_100881223 44Ga0193731_11418022 45Ga0210403_110198701 46Ga0193719_100206344 47Ga0210385_103546852 48Ga0210387_109969381 49Ga0210386_110716442 50Ga0210394_108969502 51Ga0210384_110752902 52Ga0210410_110187641 53Ga0126371_106463282 54Ga0224547_10334361 55Ga0137417_12780062 56Ga0207647_101850651 57Ga0209152_100207803 58Ga0209152_101533982 59Ga0209056_105920661 60Ga0209577_104883213 61Ga0209220_11527971 62Ga0208988_10586742 63Ga0208827_10542961 64Ga0209118_10212183 65Ga0209060_101798302 66Ga0209006_108960912 67Ga0302233_102349002 68Ga0308309_100700744 69Ga0311301_121558632 70Ga0335078_121813001 71Ga0335070_101435641 72Ga0335081_111844341 73Ga0335076_101675511 74Ga0335077_101108096 75Ga0335077_103761322
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38 1Ga0208042_10581921 2LJNas_10012201 3JGI12053J15887_101935841 4Ga0062384_1000310004 5Ga0062384_1005691501 6Ga0066673_102268042 7Ga0070661_1001700621 8Ga0070713_1022143472 9Ga0070710_100907054 10Ga0066687_102213221 11Ga0070741_108428961 12Ga0070732_109771481 13Ga0066699_105797491 14Ga0070761_105568172 15Ga0066706_110975252 16Ga0070762_106734992 17Ga0080026_102586921 18Ga0075017_1006138691 19Ga0075019_106007091 20Ga0075030_1012661901 21Ga0075018_102739701 22Ga0066658_105528742 23Ga0075433_102948821 24Ga0099795_100715502 25Ga0099792_109775431 26Ga0116222_14890831 27Ga0116125_11434272 28Ga0116135_11754251 29Ga0116224_100121826 30Ga0116216_101034871 31Ga0116216_107319541 32Ga0126380_111370671 33Ga0126372_100464514 34Ga0126379_111293112 35Ga0136449_1023182531 36Ga0136806_14357251 37Ga0137392_107830501 38Ga0137392_112479121 39Ga0137388_100728474 40Ga0137379_108009681 41Ga0137367_108331252 42Ga0164298_116112941 43Ga0164304_109337032 44Ga0181525_108194582 45Ga0137418_101013371 46Ga0137409_108716672 47Ga0187819_107922722 48Ga0187786_103903811 49Ga0187780_105792571 50Ga0187766_102721872 51Ga0187766_107887692 52Ga0187772_104976542 53Ga0187769_107542152 54Ga0187771_114189001 55Ga0066662_100881223 56Ga0193731_11418022 57Ga0210407_103685292 58Ga0210403_103310641 59Ga0179596_102934412 60Ga0210404_102632072 61Ga0210405_111842971 62Ga0210385_103546852 63Ga0210389_109420371 64Ga0210387_109969381 65Ga0210386_110716442 66Ga0210394_105520992 67Ga0210394_108969502 68Ga0210384_110752902 69Ga0210410_110187641 70Ga0126371_106463282 71Ga0224547_10334361 72Ga0137417_12780062 73Ga0207692_100710613 74Ga0207647_101850651 75Ga0209152_100207803 76Ga0209152_101533982 77Ga0209056_105920661 78Ga0209577_104883213 79Ga0208199_10764692 80Ga0209735_10744331 81Ga0209220_11527971 82Ga0208988_10586742 83Ga0209118_10212183 84Ga0209060_101798302 85Ga0209693_104749552 86Ga0302233_102349002 87Ga0308309_100700744 88Ga0307476_103345111 89Ga0307474_112612192 90Ga0311301_121558632 91Ga0307471_1009540842 92Ga0310812_101506831 93Ga0335078_121813001 94Ga0335070_101435641 95Ga0335081_111844341 96Ga0335076_101675511 97Ga0335077_100853191 98Ga0335077_101108096 99Ga0335077_103761322 100Ga0310810_109685372
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.18% β-sheet: 12.12% Coil/Unstructured: 69.70%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00202	Aminotran_3	60.14
PF13561	adh_short_C2	25.87
PF00106	adh_short	1.40
PF01266	DAO	0.70
PF00682	HMGL-like	0.70
PF02630	SCO1-SenC	0.70
PF00561	Abhydrolase_1	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.70

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	32.17 %
Unclassified	root	N/A	67.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	32.17 %
Unclassified	root	N/A	67.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.17 %
Unclassified	root	N/A	67.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Unclassified	root	N/A	67.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Unclassified	root	N/A	67.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Unclassified	root	N/A	67.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Unclassified	root	N/A	67.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.59 %
Unclassified	root	N/A	67.83 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1001220	All Organisms → cellular organisms → Bacteria	3876	Open in IMG/M
3300001661\|JGI12053J15887_10193584	Not Available	1039	Open in IMG/M
3300004082\|Ga0062384_100031000	All Organisms → cellular organisms → Bacteria	2413	Open in IMG/M
3300004082\|Ga0062384_100569150	Not Available	762	Open in IMG/M
3300005175\|Ga0066673_10226804	Not Available	1075	Open in IMG/M
3300005328\|Ga0070676_11199352	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005344\|Ga0070661_100170062	Not Available	1655	Open in IMG/M
3300005354\|Ga0070675_100844387	Not Available	838	Open in IMG/M
3300005436\|Ga0070713_102214347	Not Available	532	Open in IMG/M
3300005437\|Ga0070710_10090705	Not Available	1802	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.11%
Host-Associated	Host-Associated	11.89%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	7.69%
Plants	Host-Associated → Plants	11.89%
Terrestrial	Environmental → Terrestrial	80.42%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	4.90%
Peat	Environmental → Terrestrial → Peat	1.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Sediment	Environmental → Aquatic → Sediment	2.80%
Soil	Environmental → Terrestrial → Soil	79.02%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.10%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.70%
Loam	Environmental → Terrestrial → Soil → Loam	12.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.20%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.39%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage	0.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.10%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.40%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.40%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.40%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.99%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage → Sediment	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.80%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 130 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10012201	3300000546	Quercus Rhizosphere	VKRVTFLGGGRITSALIAGLRXAKFDKQIVVHDRHPEKLK
JGI12053J15887_101935841	3300001661	Forest Soil	MKNARKNAMIFLGGGRITGALLAGLRLAGYSRPIVVHDRHP
Ga0062384_1000310004	3300004082	Bog Forest Soil	MKATVFLGGGRITSALISGLRLAKYEAPIVVYDRHVQKLRQLKKLYG
Ga0062384_1005691501	3300004082	Bog Forest Soil	VKAGSGGKATVFLGGGRITGALVAGLRLAKYDRPIVVHDRN
Ga0066673_102268042	3300005175	Soil	MKGSRAEATVFLCGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQYG
Ga0070676_111993522	3300005328	Miscanthus Rhizosphere	MKATVFLGGGRITTALIAGLRLARYPTPIVVHDRHPERLRRLRR
Ga0070661_1001700621	3300005344	Corn Rhizosphere	MKAVRNNAVVFLGGGRITSALLAGLRLAGFRQPVVVHDHNPHKLRQLK
Ga0070675_1008443871	3300005354	Miscanthus Rhizosphere	MKAVRNNAVVFLGGGRITSALLAGLRLAGFRQPVVVHDHNPHKLRQLKR
Ga0070713_1022143472	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKAARKHAIVFLGGGRITGALLAGLRLTNYDQPIVVHDRHPQKL
Ga0070710_100907054	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKATVFLGGGRITGALCAGLRLAGDHREIVVHDRHPEKLNA
Ga0070700_1014865902	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKAVRTNAAVFLGGGRITSALLAGLRLAGFRQPVVVHDHNPHKLRQLKRQY
Ga0066687_102213221	3300005454	Soil	MKSTMFLGGGRITGALLAGLRLAKNKTPILVHDRNEHKLRALE
Ga0070741_108428961	3300005529	Surface Soil	MRRTMKATVFLGGGRITSALVSGLRLSAYSAPIIVFDRHAAKLLRLQRAFDVIPET
Ga0070732_109771481	3300005542	Surface Soil	LRGDLVFLGGGRITTALLSGLRQAKFRGSIVVHDRNLHKLAQ
Ga0066699_105797491	3300005561	Soil	MKATVFLGGGRITTALIAGLRRARYRSPIVVHDRHPERL
Ga0070761_105568172	3300005591	Soil	MSSTVFLGGGRITSALVAGLRRAGHKGVIVVHDRNAEK
Ga0066706_110975252	3300005598	Soil	MRGTRVKATVFLGGGRITSALVAGLRAAGCREPIVVLDRHPSKLRLLE
Ga0070762_106734992	3300005602	Soil	MKATVFLGGGRITGAMVAGLRLAKYPRQLVVYDRHLERLRALQRESQVE
Ga0080026_102586921	3300005952	Permafrost Soil	MKAARQNAIVFLGGGRITGALLAGLHLAGHDGPIVVHDRHPHKLHQLRVQHSVKI
Ga0075017_1006138691	3300006059	Watersheds	MKVTHESAHMKAARRNAAVFLGGGRITGALLAGLRLAGYNEPIVVHDRHAGKLKQLRRQY
Ga0075019_106007091	3300006086	Watersheds	MRRARKHAVVFLGGGRITGALLAGLHLADYDEPIVVHDRHPQKLRQLRV
Ga0075030_1012661901	3300006162	Watersheds	VTATVFLGGGRITAALIAGLRLAGDKTPIVVHDRNPYKLRALNRE
Ga0075018_102739701	3300006172	Watersheds	VKTGYGVKATVFLGGGRITSALVAGLRLTKYDKPIVVHDRNPGRLRQLKEQY
Ga0066658_105528742	3300006794	Soil	VKTTVFLGGGRITGVLLAGLRLAGYKEPVVVHDRHPRKL
Ga0075433_102948821	3300006852	Populus Rhizosphere	MKTTVFLGGGRITSALVAGLRLAGYEPPIVVHDRHSRKLKE
Ga0099795_100715502	3300007788	Vadose Zone Soil	VKGIVFLGGGRITSALIAGLRLAKYGESIVVHDRHSKKL
Ga0099792_109775431	3300009143	Vadose Zone Soil	VKATVFLGGGRITGALVAGLRLASFSQPIVVHDRNSEKLRQL
Ga0116222_14890831	3300009521	Peatlands Soil	LKTGSDLRATVFLGGGCITSALVAGLRLAKYEKPIV
Ga0105237_106317582	3300009545	Corn Rhizosphere	MKAARKHAIVFLGGGRITGALLAGLRLTDYDQPIVVHDRHPQ
Ga0116125_11434272	3300009628	Peatland	VKATVFLGGGRITSALVAGLRLAKYRRPIVVYDRHSKKLQQLKRQYGVI
Ga0116135_11754251	3300009665	Peatland	LRATVFLGGGRITNALVAGLRLAKYDKPIVVHDRNPSKLRQL
Ga0116224_100121826	3300009683	Peatlands Soil	VRATVFLGGGRITAALIAGLRLAKYDRPIIVHDRNPS
Ga0116216_101034871	3300009698	Peatlands Soil	MRTGVKATVFLGGGRITSALIAGLRLAKYDQPIIVHDRNPRKLR
Ga0116216_107319541	3300009698	Peatlands Soil	MKATVFLGGGHITGALAAGLRLAGYDGEIVVYDLHPEKLRALRRESRVEMVRDLK
Ga0126380_111370671	3300010043	Tropical Forest Soil	MKAIVFLGGGRITGALCAGLRLAGDRREILVYDRNAE
Ga0134067_104710372	3300010321	Grasslands Soil	MKGSRAEATVFLGGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQY
Ga0134063_103570732	3300010335	Grasslands Soil	MKGSRAEATVFLGGGRITSALVAGLRLSGYGQPIIVHDRHAQKL
Ga0134062_100178163	3300010337	Grasslands Soil	MKGSRAEATVFLCGGRITSALVAGLRLSGYGQPIIVHDRH
Ga0074046_100125375	3300010339	Bog Forest Soil	VAKAPVKSTVFLGAGRITSALVAGLRLAKYARPIVVYDR
Ga0126372_100464514	3300010360	Tropical Forest Soil	VKAIVFLGGGRITSALVAGLRLGKYRAPVIVHDRNPHKLRDLKKK
Ga0126379_111293112	3300010366	Tropical Forest Soil	MKATVFLGAGRITAALIAGLRLAKYANPILVHDRHAE
Ga0136449_1023182531	3300010379	Peatlands Soil	MMATVFLGAGRITSALLAGLRLAKYDGPILVHDHNPEKLRR
Ga0136806_14357251	3300010386	Sediment	VKTTVFLGGGRITSALIAGLRLAKYKGPIVVHDRHPRKLRQLKRR
Ga0137392_107830501	3300011269	Vadose Zone Soil	VKRTGVKVLVFLGGGRITGALVAGLRRAGYNKPIVVHDRHPHKLRQ
Ga0137392_112479121	3300011269	Vadose Zone Soil	VKATVFLGGGRITSALVAGLRLAKYGPPIVVHDRHFKKLQEL
Ga0137388_100728474	3300012189	Vadose Zone Soil	MKTARANTTVFLGGGRITGALLAGLRLTGYDQPIVVHDRHPAKLRQLRRDHGVS
Ga0137376_109379372	3300012208	Vadose Zone Soil	MKGSRAEATVFLCGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQYGV
Ga0137379_108009681	3300012209	Vadose Zone Soil	MNVIVFLGGGRITSALVAGLRLAEYDGEIVVYDRNPGKVRAL
Ga0137367_108331252	3300012353	Vadose Zone Soil	MKATVFLGGGRITGALAAGLRLARSKASLVVYDRNPEKVRALR
Ga0157297_103565862	3300012914	Soil	MKAVRNNAVVFLGGGRITSALLAGLRLAGFRQPVVVHD
Ga0137410_104693712	3300012944	Vadose Zone Soil	MKAAHANTIVFLGGGRITGALLAGLRLVGYDRPLVV
Ga0164298_116112941	3300012955	Soil	VKATVFLGGGRITAALIAGLRLAKYRAPVIVHDRNPHKLRALKKKFG
Ga0134110_102831882	3300012975	Grasslands Soil	MKGSRAEATVFLGGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQ
Ga0164304_109337032	3300012986	Soil	MKAVRKHAVVFLGGGRITSALLAGLRLAVFRRPVV
Ga0164304_113402922	3300012986	Soil	VKATVFLGGGRITAALIAGLRLAKYRAPVIVHDRNPHKLRALK
Ga0157371_105600721	3300013102	Corn Rhizosphere	MKAVRTNAAVFLGGGRITSALLAGLRLAGFRQPVVVHDHNPHKLRQLKR
Ga0163162_108511302	3300013306	Switchgrass Rhizosphere	MKATVFLGGGRITTALTAGLRLAHYPTSIVVHDRHPE
Ga0181525_108194582	3300014654	Bog	VKATVFLGGGRITSALVAGLRLAGYRHPIVVHDRNLE
Ga0137418_101013371	3300015241	Vadose Zone Soil	MVFLGGGRITKALIAGLRLAGDKTPIVVHDRNAHKLRALQ
Ga0137409_108716672	3300015245	Vadose Zone Soil	MRTSATVFLGGGRITSAMAAGLRLAGYREEIVVYDRHPEKL
Ga0182006_10260904	3300015261	Rhizosphere	MKATVFLGGGRITTALIAGLRLAHYPTSIVVHDRHPELLRRLRR
Ga0187819_107922722	3300017943	Freshwater Sediment	VKAIVFLGGGRITAALVAGLRLAGYGQPIVVHDRHARKL
Ga0187786_103903811	3300017944	Tropical Peatland	MTTVFIGGGRITSALLAGLRLTSYKQPLIVHDRNAHKLRSLKRDFHV
Ga0187780_105792571	3300017973	Tropical Peatland	MKTTVFLGGGRITGALLAGLRLAKYPWPLVVYDHHPEKLRRLKQHYGVTAER
Ga0187766_102721872	3300018058	Tropical Peatland	MKATVFLGGGRITGALVGGLRLANHAGPLLVYDRHPEKLRQLKNRYRVSVEA
Ga0187766_107887692	3300018058	Tropical Peatland	VKANATVFLGGGRITGALLAGLKLAGYKSPIIVHDRNP
Ga0187772_104976542	3300018085	Tropical Peatland	MNSTLFLGAGRITSALAAGLRLAGDERRIIAYDRHPEK
Ga0187769_107542152	3300018086	Tropical Peatland	MKAIVFVGGGRITSALLAGLRLANFRGSLLVYDRHPEKLRRLGRH
Ga0187771_114189001	3300018088	Tropical Peatland	MKSTVFLGGGRITSALVAGLRLAKYRQPIVGYDINPQKLRALRSEFRVGI
Ga0066662_100881223	3300018468	Grasslands Soil	VHEINVKRTREKAIVFLGGGRITGALVAGLRLAGYHKPIVVHDR
Ga0193731_11418022	3300020001	Soil	MKATVFLGGGRITGAMIAGLRRAHYSTPIVVHDRHAAKLR
Ga0210407_103685292	3300020579	Soil	MEAIVFLGGGRITNALVAGLRLAKYDKPIIVHDRNPGKLR
Ga0210403_103310641	3300020580	Soil	VKATVFLGGGRITAALLAGLRLANYRSPIVVHDRNPHKLRALQKE
Ga0210403_110198701	3300020580	Soil	MKATVFLGGGRITGALAAGLRLAGYEREIVFYDRNP
Ga0179596_102934412	3300021086	Vadose Zone Soil	MKAAHANTIVFLGGGRITGALLAGLRLVGYDRPLVVHDRHPSKLRQ
Ga0210404_102632072	3300021088	Soil	MKNARNNAIVFLGGGRITGALLAGLRLAGYSQPIVV
Ga0210405_111842971	3300021171	Soil	MKATVFLGGGHITGAMAAGLRLAGFEGAMVAYDRHPEKVRALR
Ga0210396_113148512	3300021180	Soil	MRTNATVFLGGGRITSAMAAGLRLAGYDEEIVVYD
Ga0193719_100206344	3300021344	Soil	MKAAGTKAARGRTTVFLGGGRITGALLAGLRLAGYD
Ga0210385_103546852	3300021402	Soil	VKATVFLGGGRITGALVAGLRLAGYDRPIVVHDWHAEKLKKLKRQYGV
Ga0210389_109420371	3300021404	Soil	MKATVFLGGGHITGALAAGLRLAGFSGEIVVYDRYP
Ga0210387_102826282	3300021405	Soil	MQEIVFLGGGRITNALVAGLRLAKYDKPIIVHDRN
Ga0210387_109969381	3300021405	Soil	MKTARKDAVVFLGGGRITGALLAGLNLAQYDEPVVV
Ga0210386_110716442	3300021406	Soil	MKAPVFLGGGRITGALLAGLRLAKYDQPIVVHDRH
Ga0210394_105520992	3300021420	Soil	VKATVFLGGGRITSALVAGLRLAKYAAPVVVYDRHPQKLRQLKR
Ga0210394_108969502	3300021420	Soil	MKPTVFLGGGRITNAFLAGLRLAKYHKPILVYDRHPS
Ga0210384_110752902	3300021432	Soil	MKAARNDAVVFVGGGRITAALLAGLRLAQYDGPVIVHDRHRSKLTEL
Ga0210410_110187641	3300021479	Soil	MRKAILFLGGGHITGALAAGLRLAGFGGEIVVYDRHPEKVRA
Ga0210410_117135752	3300021479	Soil	MKAARNDAVVFVGGGRITAALLAGLRLAQYDGPVIVHDRHRSKLTE
Ga0126371_106463282	3300021560	Tropical Forest Soil	MKSGAGMKRIVFLGGGRITNALLAGLHRAGYKAPIVV
Ga0224547_10334361	3300023255	Soil	MLGTLVKATVFLGGGRITSVLVAGLRLADYDQPIVVH
Ga0137417_12780062	3300024330	Vadose Zone Soil	MTATVFLGGGRITSALVAGLRLAKYKPPLVVYDRHPEKLRQLKREFNV
Ga0207692_100710613	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKSTVFLGGGRITGALISGLRLAAYEQPIIVHDRHAAKMR
Ga0207647_101850651	3300025904	Corn Rhizosphere	MKATVFLGGGRITTALIAGLRLAHYPTSIVVHDRHPELLRRLRREYSVFIDPDLHHAV
Ga0207654_107846421	3300025911	Corn Rhizosphere	MKAVRTNAAVFLGGGRITSALLAGLRLAGFRQPVVVHDH
Ga0207671_103539642	3300025914	Corn Rhizosphere	MKATVFLGGGRITTALIAGLRLAHYPTPIVVHDRHPELLRRLRRQYP
Ga0207671_104645961	3300025914	Corn Rhizosphere	MKAARKHAIVFLGGGRITGALLAGLRLTDYDQPIVVH
Ga0207687_101423871	3300025927	Miscanthus Rhizosphere	MKAARKHAIVFLGGGRITGALLAGLRLTNYDQPIVVH
Ga0207706_104093162	3300025933	Corn Rhizosphere	MKATVFLGGGRITTALIAGLRLAHYPTSIVVHDRHPELL
Ga0207709_111456982	3300025935	Miscanthus Rhizosphere	MKAVRNNAVVFLGGGRITSALLAGLRLAGFRQPVVV
Ga0207708_112944741	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKAVRTNAAVFLGGGRITSALLAGLRLAGFRQPVVVHDHNPHKLRQLKRQYD
Ga0207674_110541972	3300026116	Corn Rhizosphere	MKATVFLGGGRITTALIAALRLAHYPTSIVVHDRHPELLRRLRR
Ga0209688_10592302	3300026305	Soil	MKGSRAEATVFLCGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQYGVV
Ga0209265_10124131	3300026308	Soil	MKGSRAEATVFLCGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLK
Ga0209152_100207803	3300026325	Soil	VKAIVFLGGGRITSALVAGLRQAGSKVSMVVYDRHP
Ga0209152_101533982	3300026325	Soil	VRRNKPILFVGGGRITSALCAGLRLGKYSREIVVYDRNPDKLR
Ga0209801_12936492	3300026326	Soil	MKGSRAEATVFLGGGRITSALVAGLRLSGYGQPIIVHDRHAQKLRKLKRQYG
Ga0209056_105920661	3300026538	Soil	VKATVFIGGGRITGALLAGLRLSGYKTPIIVHDRHASKLRQL
Ga0209577_104883213	3300026552	Soil	MVQKNTLKRATVFLGGGRITSALIAGLRLVGYQREIVVYDRNPARLRAL
Ga0207484_1017331	3300027466	Soil	MKATVFLGGGRITTALIAGLRLAHYPTPIVVHDRHPELLRRLRRQYS
Ga0208199_10764692	3300027497	Peatlands Soil	MRATVFLGGGRITGALIAGLRLAGYKPTIVVHDRNPEKV
Ga0209735_10744331	3300027562	Forest Soil	VSTTVFLGGGRITSALVAGLCRVGHKGVIVVHDRNAEKLRA
Ga0208042_10581921	3300027568	Peatlands Soil	VKATVFLGGGRITGALLAGLRLAGYGQPIVVHDRHAEK
Ga0209003_10583011	3300027576	Forest Soil	VKATVFLGGGRITAALLAGLRLANYRSPIVVHDRN
Ga0209220_11527971	3300027587	Forest Soil	VKATVFVGGGRITAALLAGLHLARDHKSILVYDRHPEKLRRLKRLYGV
Ga0208988_10586742	3300027633	Forest Soil	MKATVFLGAGRITGALVAGLHLGGYKRPIIVYDRNPKKLS
Ga0208827_10542961	3300027641	Peatlands Soil	LRATVFLGGGRITGALVAGLRLAKYDKPIIVHDRNPKKLGQLK
Ga0209118_10212183	3300027674	Forest Soil	MKAIVFLGGGRITSALVAGLRLASYRKPIVVHDRNSGKLKTLKRQYGVVV
Ga0209060_101798302	3300027826	Surface Soil	VILKPRAKATVFLGGGRITSALIAGLRLANYDKPI
Ga0209693_104749552	3300027855	Soil	MKAIVFLGGGRITNALVAGLRLAKYGKPTLVHDRNPGKLRQLKKQY
Ga0209283_107536952	3300027875	Vadose Zone Soil	MKTARANTTVFLGGGRITGALLAGLRLTGYDQPIVVHDRHPAKLRQLHRDYG
Ga0209169_100723673	3300027879	Soil	VKATVFLGGGRITGALLAGLRLAGYDQPIVVHDRHARKLEQLK
Ga0209415_1000861918	3300027905	Peatlands Soil	LRATVFLGGGRITGALVAGLRLAKYDKPIIVHDRNP
Ga0209006_108960912	3300027908	Forest Soil	MKATVFLGGGHITGAMAAGLRLAGFEGAMVAYDRHPEKVRALRRESR
Ga0307293_102612541	3300028711	Soil	MKATVFLGGGRITGAMIAGLRRAHYSTPIVVHDRHA
Ga0302233_102349002	3300028746	Palsa	MKAQATVFLGGGRITGALIAGLRLAGYRRAIVVHDRNAGKLRALRRE
Ga0307312_102154781	3300028828	Soil	MKATVFLGGGRITGAMIAGLRRAHYSTPIVVHDRHAAKL
Ga0308309_100700744	3300028906	Soil	MQTKATVFLGGGRITGALIAGLRLAGYDGRIVVHDHNSGKLR
Ga0222749_102857682	3300029636	Soil	VKATVFLGGGRITSALVAGLRLAGYDRPIVVHDRHAEKLRTLKR
Ga0307476_103345111	3300031715	Hardwood Forest Soil	MNTTVFVGGGRITSALIAGLRRARYRGMIVVHDRNAEKLQ
Ga0307474_112612192	3300031718	Hardwood Forest Soil	MKATVFLGGGRITGALAAGLRLAGYEREIVVYDRNP
Ga0311301_121558632	3300032160	Peatlands Soil	VTSAKAAVFLGGGRITSALVAGLRLAGYEREIVVYDRNPEKMPA
Ga0307471_1009540842	3300032180	Hardwood Forest Soil	VKGSRAEATVFLGGGRITSALIAGLRLSGYEQPIVVHDSNVQKLRKLKR
Ga0310812_101506831	3300032421	Soil	MKATVFLGGGRITGALLSGLRLAGYSQPIVVHDRHAAKLRQLQ
Ga0335078_121813001	3300032805	Soil	VAVRNKQATVFLGGGRITSAMVAGLRLAGDRREIVVYDRNPD
Ga0335070_101435641	3300032829	Soil	MSTAVFLGGGRITTALLAGLRGAGYRTPIVVHDRNPGKLRDLKRK
Ga0335081_111844341	3300032892	Soil	MRTTVFLGGGRITAALLAGLRLAKYPARLVVYDHH
Ga0335076_101675511	3300032955	Soil	VKPIVFLGGGRITAALLAGLQLARYRRPILVYDRHPSKLRQL
Ga0335077_100853191	3300033158	Soil	MSATVFLGGGRITAALVAGLRGAGFRGRIVVHDRNPAK
Ga0335077_101108096	3300033158	Soil	VNERAKDAVAFLGGGRITSALTAGLRLSGFRERIVVYD
Ga0335077_103761322	3300033158	Soil	MKATVFIGGGRITRALLAGLRLAKYRGSLLVYDRHPQKL
Ga0310810_109685372	3300033412	Soil	MKATVFLGGGRITGALAAGLRLAGDRCEIVVYDRHPEK
Ga0310811_106287161	3300033475	Soil	VKSTVFLGGGRITSALIAGLQLAKYKTPIVVHDRH

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052174

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences