Metagenome / Metatranscriptome Family F051427

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051427
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	48 residues
Representative Sequence	MKNNAMAIGVRTRIIYSALAIMTIILSIGENTMAQTKSTAVVKNIV
Number of Associated Samples	118
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.31 %
% of genes near scaffold ends (potentially truncated)	92.36 %
% of genes from short scaffolds (< 2000 bps)	86.81 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.861 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.139 % of family members)
Environment Ontology (ENVO)	Unclassified (31.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.306 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.46% β-sheet: 0.00% Coil/Unstructured: 40.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF13561	adh_short_C2	20.14
PF00753	Lactamase_B	18.06
PF12680	SnoaL_2	4.17
PF02518	HATPase_c	3.47
PF00107	ADH_zinc_N	2.78
PF07730	HisKA_3	2.78
PF00106	adh_short	2.08
PF08240	ADH_N	1.39
PF03061	4HBT	1.39
PF02826	2-Hacid_dh_C	1.39
PF15780	ASH	1.39
PF00582	Usp	0.69
PF04248	NTP_transf_9	0.69
PF13439	Glyco_transf_4	0.69
PF00440	TetR_N	0.69
PF07045	DUF1330	0.69
PF12697	Abhydrolase_6	0.69
PF02781	G6PD_C	0.69
PF16925	TetR_C_13	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	2.78
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	2.78
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	2.78
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	2.78
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.69
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.69
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.86 %
Unclassified	root	N/A	20.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.86 %
Unclassified	root	N/A	20.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.86 %
Unclassified	root	N/A	20.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.14 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.17 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	4.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.14 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	4.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.17 %
Capsulimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales	4.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.08 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.39 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.14 %
Capsulimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae	4.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.08 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.69 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.69 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.69 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.14 %
Capsulimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas	4.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.39 %
Paraburkholderia oxyphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia oxyphila	0.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.69 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.69 %
unclassified Burkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia	0.69 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.14 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	4.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Bradyrhizobium sp. 139	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1.39 %
Burkholderia sp. D7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. D7	0.69 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.69 %
Paraburkholderia oxyphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia oxyphila	0.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.69 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.14 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	4.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.17 %
Bradyrhizobium sp. 139	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	1.39 %
Rhizobium sp. YR295	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. YR295	0.69 %
Burkholderia sp. D7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. D7	0.69 %
Paraburkholderia oxyphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia oxyphila	0.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.69 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001177\|JGI12634J13548_1006527	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300001593\|JGI12635J15846_10105897	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300001593\|JGI12635J15846_10362068	Not Available	886	Open in IMG/M
3300003505\|JGIcombinedJ51221_10416661	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300004080\|Ga0062385_10804568	Not Available	616	Open in IMG/M
3300005176\|Ga0066679_10554641	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005435\|Ga0070714_101035426	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005435\|Ga0070714_101971376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia oxyphila	570	Open in IMG/M
3300005436\|Ga0070713_100562608	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300005437\|Ga0070710_11525834	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005439\|Ga0070711_100289520	Not Available	1299	Open in IMG/M
3300005467\|Ga0070706_100074034	All Organisms → cellular organisms → Bacteria	3153	Open in IMG/M
3300005467\|Ga0070706_100825517	Not Available	858	Open in IMG/M
3300005518\|Ga0070699_100198509	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300005537\|Ga0070730_10476199	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300005555\|Ga0066692_10684725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	637	Open in IMG/M
3300005610\|Ga0070763_10701919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	593	Open in IMG/M
3300005921\|Ga0070766_10799429	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005921\|Ga0070766_10998006	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006050\|Ga0075028_100489100	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300006059\|Ga0075017_100054020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2707	Open in IMG/M
3300006172\|Ga0075018_10372099	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300006175\|Ga0070712_101492278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300006176\|Ga0070765_100213721	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300006176\|Ga0070765_100710386	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300006893\|Ga0073928_10780063	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300007258\|Ga0099793_10610916	Not Available	547	Open in IMG/M
3300007265\|Ga0099794_10286073	Not Available	853	Open in IMG/M
3300009090\|Ga0099827_10584883	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300009143\|Ga0099792_10302462	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300009522\|Ga0116218_1411441	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300009552\|Ga0116138_1123131	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300009646\|Ga0116132_1019748	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300009759\|Ga0116101_1094928	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300009760\|Ga0116131_1026298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2046	Open in IMG/M
3300011269\|Ga0137392_11545745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	522	Open in IMG/M
3300012181\|Ga0153922_1170401	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300012189\|Ga0137388_11112482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	727	Open in IMG/M
3300012361\|Ga0137360_11772482	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012363\|Ga0137390_10019325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6281	Open in IMG/M
3300012363\|Ga0137390_10076994	All Organisms → cellular organisms → Bacteria	3273	Open in IMG/M
3300012683\|Ga0137398_10347853	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300012683\|Ga0137398_10829873	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300012917\|Ga0137395_10716992	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012918\|Ga0137396_10242185	Not Available	1329	Open in IMG/M
3300012923\|Ga0137359_11011505	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300012925\|Ga0137419_10624012	Not Available	868	Open in IMG/M
3300012927\|Ga0137416_10979297	Not Available	755	Open in IMG/M
3300012930\|Ga0137407_12167228	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012955\|Ga0164298_11177516	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012957\|Ga0164303_10280842	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300012961\|Ga0164302_11749258	Not Available	523	Open in IMG/M
3300017823\|Ga0187818_10472204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	561	Open in IMG/M
3300017993\|Ga0187823_10140046	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300018007\|Ga0187805_10455112	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300018090\|Ga0187770_10313094	All Organisms → cellular organisms → Bacteria → Acidobacteria	1223	Open in IMG/M
3300019881\|Ga0193707_1011423	All Organisms → cellular organisms → Bacteria	3010	Open in IMG/M
3300019888\|Ga0193751_1122490	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300020579\|Ga0210407_10837050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	708	Open in IMG/M
3300020580\|Ga0210403_10931565	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300020582\|Ga0210395_10081592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2383	Open in IMG/M
3300020583\|Ga0210401_10820752	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300021168\|Ga0210406_11034607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300021170\|Ga0210400_10144920	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300021170\|Ga0210400_10733898	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300021171\|Ga0210405_10218729	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300021171\|Ga0210405_10490462	Not Available	963	Open in IMG/M
3300021171\|Ga0210405_11096807	Not Available	595	Open in IMG/M
3300021402\|Ga0210385_11191740	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300021406\|Ga0210386_11474285	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300021407\|Ga0210383_10151516	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300021407\|Ga0210383_10502767	Not Available	1046	Open in IMG/M
3300021420\|Ga0210394_10929968	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300021420\|Ga0210394_11354299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	606	Open in IMG/M
3300021420\|Ga0210394_11568521	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300021432\|Ga0210384_10638987	Not Available	954	Open in IMG/M
3300021433\|Ga0210391_10062698	All Organisms → cellular organisms → Bacteria	2948	Open in IMG/M
3300021433\|Ga0210391_10103119	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300021478\|Ga0210402_10160372	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300021479\|Ga0210410_10335918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1355	Open in IMG/M
3300021559\|Ga0210409_10620411	Not Available	950	Open in IMG/M
3300021559\|Ga0210409_11705341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300022730\|Ga0224570_104655	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300024225\|Ga0224572_1030433	All Organisms → cellular organisms → Bacteria → Acidobacteria	1031	Open in IMG/M
3300024271\|Ga0224564_1091288	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300025432\|Ga0208821_1020398	All Organisms → cellular organisms → Bacteria → Acidobacteria	1455	Open in IMG/M
3300025442\|Ga0208034_1062592	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300025453\|Ga0208455_1047419	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300025922\|Ga0207646_10919620	Not Available	775	Open in IMG/M
3300025928\|Ga0207700_11865575	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300025929\|Ga0207664_10240505	Not Available	1576	Open in IMG/M
3300025939\|Ga0207665_11162835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300026446\|Ga0257178_1059417	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300026480\|Ga0257177_1076913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	538	Open in IMG/M
3300026481\|Ga0257155_1062646	Not Available	591	Open in IMG/M
3300026482\|Ga0257172_1011435	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300026515\|Ga0257158_1134797	Not Available	500	Open in IMG/M
3300026551\|Ga0209648_10039772	All Organisms → cellular organisms → Bacteria	4070	Open in IMG/M
3300026551\|Ga0209648_10055365	All Organisms → cellular organisms → Bacteria	3381	Open in IMG/M
3300026557\|Ga0179587_10335846	Not Available	978	Open in IMG/M
3300026683\|Ga0208210_100193	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300027172\|Ga0208098_1012627	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300027548\|Ga0209523_1036936	Not Available	989	Open in IMG/M
3300027610\|Ga0209528_1118118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	585	Open in IMG/M
3300027629\|Ga0209422_1065304	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300027660\|Ga0209736_1072939	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300027795\|Ga0209139_10270312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. YR295	600	Open in IMG/M
3300027853\|Ga0209274_10331042	Not Available	784	Open in IMG/M
3300027855\|Ga0209693_10181277	Not Available	1038	Open in IMG/M
3300027875\|Ga0209283_10829581	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300027889\|Ga0209380_10486965	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300027895\|Ga0209624_11130500	Not Available	503	Open in IMG/M
3300027908\|Ga0209006_11248274	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300027911\|Ga0209698_10135720	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300027911\|Ga0209698_10175072	All Organisms → cellular organisms → Bacteria → Acidobacteria	1747	Open in IMG/M
3300027911\|Ga0209698_10175073	All Organisms → cellular organisms → Bacteria → Acidobacteria	1747	Open in IMG/M
3300027911\|Ga0209698_10737583	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300028017\|Ga0265356_1019074	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300028746\|Ga0302233_10327512	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300030399\|Ga0311353_10331157	All Organisms → cellular organisms → Bacteria → Acidobacteria	1387	Open in IMG/M
3300030524\|Ga0311357_10041511	All Organisms → cellular organisms → Bacteria → Proteobacteria	4742	Open in IMG/M
3300030815\|Ga0265746_1065809	Not Available	524	Open in IMG/M
3300030862\|Ga0265753_1011420	Not Available	1176	Open in IMG/M
3300031057\|Ga0170834_113660830	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031090\|Ga0265760_10043375	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300031122\|Ga0170822_13660925	Not Available	1062	Open in IMG/M
3300031231\|Ga0170824_111576271	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031446\|Ga0170820_12351496	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300031708\|Ga0310686_105067244	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300031708\|Ga0310686_116773680	All Organisms → cellular organisms → Bacteria	2477	Open in IMG/M
3300031715\|Ga0307476_10002084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11996	Open in IMG/M
3300031715\|Ga0307476_10993414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. D7	618	Open in IMG/M
3300031753\|Ga0307477_10232895	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300031753\|Ga0307477_10886623	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031753\|Ga0307477_11046221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	534	Open in IMG/M
3300031754\|Ga0307475_10429712	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300031754\|Ga0307475_11323208	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300031820\|Ga0307473_10281484	Not Available	1037	Open in IMG/M
3300031823\|Ga0307478_10069921	All Organisms → cellular organisms → Bacteria	2652	Open in IMG/M
3300031962\|Ga0307479_10269131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1683	Open in IMG/M
3300031962\|Ga0307479_10485326	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300032180\|Ga0307471_100557124	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300032180\|Ga0307471_101215539	Not Available	917	Open in IMG/M
3300032515\|Ga0348332_11448381	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.22%
Host-Associated	Host-Associated	2.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Aquatic	Environmental → Aquatic	13.89%
Plants	Host-Associated → Plants	2.08%
Fungi	Host-Associated → Fungi	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.56%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Sediment	Environmental → Aquatic → Sediment	4.86%
Peat	Environmental → Terrestrial → Peat	2.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.08%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.69%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.69%
Mycelium	Host-Associated → Fungi → Mycelium	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.94%
Loam	Environmental → Terrestrial → Soil → Loam	22.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.39%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.03%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.39%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.08%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.08%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.39%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.69%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001177	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026683	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN352 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12634J13548_10065271	3300001177	Forest Soil	MKSKAMAIGVRTRISYCALAIMTIILSVGENTMAQTKSTAVVKNIVLVH
JGI12635J15846_101058971	3300001593	Forest Soil	MKNNSMAIGVRTRIIYCAIAIMTIILSMGENTMAQTKSTAVVKNIVLVHGGLVDG
JGI12635J15846_103620682	3300001593	Forest Soil	MKSKAMAIGVRTRISYCALAIMTIILSMGENTMAQTKSTAVVKNIVLVHGGL
JGIcombinedJ51221_104166611	3300003505	Forest Soil	MKNNAIPMGVGTRIIYCAMAIMTLILSMGENTMAQTKSTAV
Ga0062385_108045682	3300004080	Bog Forest Soil	MKNNGMGMGVRTRIIYGAIAIMTILLSIGENTMAQTKSTAVVKNI
Ga0066679_105546411	3300005176	Soil	MKNNARAMGVRTRIIYGAMAIMTLLLSIGENTMAQTKSTAVVKNIVLVHGGLVD
Ga0070714_1010354261	3300005435	Agricultural Soil	MKNNAMPISVRTRSIYGVVAIITIMLGIGENTMAQTKSTA
Ga0070714_1019713762	3300005435	Agricultural Soil	MKNKAIPMAVRTRIIYGAMAIMTILLSIGENTMAQTKATAVVKNIVLVHGGLVDGSGWEA
Ga0070713_1005626081	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKNNAMAMGVRTRIIYGAMAIMTIILSMGENTMAQTKSTAVVKNIVIVHGGLVDGS
Ga0070710_115258341	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKAMAIGVRTRISYCALAIMTIILSVGENTMAQTKSTAVVKNIVLVHG
Ga0070711_1002895203	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKNKAMAIGVRTRSIAGVLAIMTILLSIGENTMAQTKSTAV
Ga0070706_1000740343	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKNNAMPISVRTRPIYGALAIITIMLGIGDNTMAQTNQRQL*
Ga0070706_1008255172	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKNKAIAIGVRTRSIYGVLAIMTILLSIGENTMAQTKSTAV
Ga0070699_1001985095	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKNNGIAMGVKTRIIYGALAILTIILSMGENTMAQTKSTTVV
Ga0070730_104761991	3300005537	Surface Soil	MKSKAMAIGVRTRISYCALAIMTIILSVGENTMAQTKSTAVVKNIVLVHGG
Ga0066692_106847252	3300005555	Soil	MKNNAIPMGVRTRVIYGAMAIMTILLSIGENTMAQTKSTAVVKN
Ga0070763_107019192	3300005610	Soil	MKSNAMAIGVRTRIIYGALAIMTIILSMGENTMAQT
Ga0070766_107994292	3300005921	Soil	MKNNAMAMGVRARIIYGAMAVMTILLSVGEHTMAQ
Ga0070766_109980062	3300005921	Soil	MKSKAMAVGVRTRISYCALAIMTTILSVGENTMAQTKSTT
Ga0075028_1004891001	3300006050	Watersheds	MKNNAMAIGVRTRIIYCAMAIMTIILSMGENTMAQTKSTAVVKNIVLVHG
Ga0075017_1000540201	3300006059	Watersheds	MKNNAMATGVRTRIIYCAMAIMTIILSMGENTMAQTKSTAVVKNIVL
Ga0075018_103720991	3300006172	Watersheds	MKNNAMPISVRTRPIYGALAIITIMLGIGDNTMAQTKSTAIVK
Ga0070712_1014922781	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKNNAMPISVRTRPIYGALAIITIMLGIGDNTMAQTKSTAVVKNIVLVHGGLVDG
Ga0070765_1002137214	3300006176	Soil	MRNNAMAIGVRTRIIYGALAIMTIILSMGENTMAQTKSTTVVKN
Ga0070765_1007103861	3300006176	Soil	MKNNAMAISVRTRIIYGALAIMTIILSMGENTMAQTKSTTVVRNIVIVHGGLVDGSGWEA
Ga0073928_107800631	3300006893	Iron-Sulfur Acid Spring	MKNNAMAIGVRTRIIYGAMAIMTIILSMGENTMAQ
Ga0099793_106109162	3300007258	Vadose Zone Soil	MKNNAMAIGVRTRIIYGALAIMTIILSMGENTMGQTKSTTVVKNIVIVHGGLVDGSGWEA
Ga0099794_102860731	3300007265	Vadose Zone Soil	MKNNAMATGVRTRIIYSALAIMTIILSIGENTMAQTKSTAVVKNIVLVHGGLVDG
Ga0099827_105848833	3300009090	Vadose Zone Soil	MKNNAIPMGVKTRIIYGALAIMTIILSMGENTMAQTKSTTVVKNIVLVHGGFVDG
Ga0099792_103024621	3300009143	Vadose Zone Soil	MKSNAMAIGVKTRFIYGVLAIMTIMLGIGENTMAQTK
Ga0116218_14114412	3300009522	Peatlands Soil	MKSKAMAIGVRTRISYCALAIMTIILSVGENTMAQTKSTA
Ga0116138_11231311	3300009552	Peatland	MKNNATAIGVRTRIIFCVLAIMTIMLGIGENTMAQTNTTTVVKNIVLVHG
Ga0116132_10197481	3300009646	Peatland	MKSKAMAIGVRTRISYCALAIMTIILSVGENTMAQTNTTT
Ga0116101_10949282	3300009759	Peatland	MKSKAMAIGVRTRIIYCAMAIMTIILSMGENTMAQTKSTAVVKN
Ga0116131_10262981	3300009760	Peatland	MKNNATAMGVRTRIIYCVLAIMTIMLGIGENTMAQTNTTTV
Ga0137392_115457451	3300011269	Vadose Zone Soil	MKNNAMAMGVKTRIIYSALAIVTIILSMGENTMAQTKSTTVVRNIVLVHGGFVDG
Ga0153922_11704012	3300012181	Attine Ant Fungus Gardens	MKNNAMAIGVRTRIVYGALAIMTVILSMGENTMAQTKSTTVVRNIVIVHGGLVDGSGWE
Ga0137388_111124823	3300012189	Vadose Zone Soil	MKNNGMAMGVKTRIIYGALAIMTIILSMGENTMAQTKSTTVVRNIVLVHGGFV
Ga0137360_117724822	3300012361	Vadose Zone Soil	MKNNAIPMGVRTRIIYGAMAIMTILLSIGENTMAQTKSTAVVKNIVLVHGGLVDGS
Ga0137390_1001932510	3300012363	Vadose Zone Soil	MKNNAMAMGVRTRVIYGAMAIMTIILSMGENTMGQTKST
Ga0137390_100769941	3300012363	Vadose Zone Soil	MKNNAMVMGVKTRIIYSVLAIMTIMLGIGENTMAQTKSGIPAL*
Ga0137398_103478531	3300012683	Vadose Zone Soil	MKNNGMAMGVKTRIIYGALAIMTIILSMGENTMAQTKSTAVVKNIVLVHGGLVD
Ga0137398_108298731	3300012683	Vadose Zone Soil	MKNNARAIGVRTRIIYGALAIMTIILSMGENTMAQTKSTA
Ga0137395_107169921	3300012917	Vadose Zone Soil	MKNNAMAMGVRTRIIYGAMAIMTILLSIGEHTMAQTKSTTVVKNIVLVHGGLVD
Ga0137396_102421851	3300012918	Vadose Zone Soil	MKNNAIPMGVRTRFIYRAMAIMTIILSMGENTMAQTKSTAVVKNIVIVHGGLVDG
Ga0137359_110115052	3300012923	Vadose Zone Soil	MKNNAMAIGVRTRIIYGALAIMTILLSIGEHAMAQTKSTAVV
Ga0137419_106240122	3300012925	Vadose Zone Soil	MKNNAMAMGVRTRIIYGALAIMTIILSMGENTMAQTKST
Ga0137416_109792972	3300012927	Vadose Zone Soil	MKNNAMAIGVRTRIIYGALAIMTIILSMGENTMAQTKSTTVVRNIVLVHGG
Ga0137407_121672281	3300012930	Vadose Zone Soil	MKNNAMAMGVRTRIIYGALAIMTIILSMGENTMAQTKSTTVVRNI
Ga0164298_111775162	3300012955	Soil	MKGGYPMKNNAMAMGVRTRIIYGALAIMTIILSMGENTMAQTKSTTVVRNII
Ga0164303_102808421	3300012957	Soil	MKNNAIPMGVRTRIIYGAMAIMTIILCIGENAMGQTKSTAVVKNIVIVH
Ga0164302_117492581	3300012961	Soil	MKGGYPMKNNAMAMGVRTRIIYGALAIMTIILSMGENTMAQTKSTTVLKNIVLVHG
Ga0187818_104722041	3300017823	Freshwater Sediment	MKKNTTAIGVRTRIIFCVLAFITIMLGIGEKTMAQTNTTTV
Ga0187823_101400462	3300017993	Freshwater Sediment	MRNHTRAIGVRTRIIFCVLAIMTIMLGIGEKTMAQTKTPSVVKNIVLVHGGFV
Ga0187805_104551121	3300018007	Freshwater Sediment	MRNNAMATGVRTRSIYGVLALMTIMLGTGDNTMAQTNTS
Ga0187770_103130942	3300018090	Tropical Peatland	MKNNATAMGVRTGMIYAVLAIMTIISSMGENTMAQ
Ga0193707_10114234	3300019881	Soil	MKSNAMAIGVRTRIIYGALAIMTIILSLGENTMAQTKSMTVVKNIVLVHGGFVDG
Ga0193751_11224901	3300019888	Soil	MKNNAMAMGVKTRIIYGALAIMTIILSMGENTMAQTKSTTVVRNI
Ga0210407_108370501	3300020579	Soil	MRNNAMATGVRTRIIYGALAIMTIILSMGENTMAQTKSTTVVKNIVLVHGG
Ga0210403_109315652	3300020580	Soil	MKNDAMAISVRTRIICGARAILTIILSIGENAIAQTKSTAVVKNIMIIHGGLVDGSGRT
Ga0210395_100815921	3300020582	Soil	MKSKAMAIGVRTRISYCALAIITIILSVGENTMAQTK
Ga0210401_108207521	3300020583	Soil	MKNNAIPMGVRTRIIYGAMAIMTIILCIGENAMAQT
Ga0210406_110346072	3300021168	Soil	MKNNVIPMGVRTRSIYGALAIMTIILSMGENTMAQTKSTAVVKNI
Ga0210400_101449201	3300021170	Soil	MKSKAMAIGVRTRISYCALAIITIILSVGENTMAQTKSTAVVKNIVL
Ga0210400_107338982	3300021170	Soil	MKNSAIPMGVRTRIIYGAMAIMTIILCIGENAMAQTKST
Ga0210405_102187291	3300021171	Soil	MKNNAMAIGVRTRIIYGALAIMTIILSMGENTMAQTKSTTVVKNIVLVHGGLV
Ga0210405_104904621	3300021171	Soil	MKNNAMAIGVRTRIIYGALAIMTIILSMGENTMAQTKSTTVVRNIVIVHGGLVDGS
Ga0210405_110968071	3300021171	Soil	MKNNAMAMGVRTRIIYGALAIMTIILSMGENTMAQTKSTTV
Ga0210385_111917402	3300021402	Soil	MKNNAMAMGVRTRISYVALAIMTIILSVGENTMAQTKSTTVVKNIVIVHGGLVD
Ga0210386_114742851	3300021406	Soil	MKNNAMAMGVRTRIIYGALAIMTIILSMGENTMAQTKSTTVVKNIILV
Ga0210383_101515162	3300021407	Soil	MKNNAMAISVRARINCGARAIMTIILSIGENAIAQTKSTAVVKNIMIVNGGLVDGSGTT
Ga0210383_105027672	3300021407	Soil	MKNNAMAIGVRTRIIYGALAIMTLILSMGENTMAQTKSTTVVRNIVIVHGGLVDGSGW
Ga0210394_109299681	3300021420	Soil	MKNNAMAISVRARINCGARAIMTIILSIGENAIAQTKSTAVVKNIMIIHGGLVDGSGRT
Ga0210394_113542991	3300021420	Soil	MKNNAIPMGVGTRIIYGALAIMTIILSMGENTMAQTKSTAVVKNIVLV
Ga0210394_115685212	3300021420	Soil	MKNNAMAMGVRPQIIYGMLAIISIILSMGENIVAQTKSTAVVRNIVLVHGGFVDGSG
Ga0210384_106389871	3300021432	Soil	MKSKAMAIGVRTRISYCALAIMTIILSVGENTMAQTKSTAVV
Ga0210391_100626985	3300021433	Soil	MKNDAMAMGVRARIIYGAMAVMTILLSVGEHTMAQTRSTAVVRNI
Ga0210391_101031191	3300021433	Soil	MKNNAMSIGVRTRIIYGAMAIMTIILSMGENTMAQTKSTTVVKNIVLVH
Ga0210402_101603723	3300021478	Soil	MRNNAMAMVVTTRIIYGALAIMTIILSTRENTLAQTKSTTVVRNIVLVHGG
Ga0210410_103359181	3300021479	Soil	MKSKAMAIGVRTRISYCALAIMTIILSVGENTMAQTKSTAVVKNIVIVHGGLVDGSGWE
Ga0210409_106204111	3300021559	Soil	MKNNAIPMGAGTRIIYCALAIMTIILSVGENTMAQTKSTAVVKNIVLVHGGLVDGS
Ga0210409_117053412	3300021559	Soil	MKNNAIPMCVRTRIIYGAMAIMTILLSIGENTMAQTKSTAVVKNIVIVHGGLVDG
Ga0224570_1046552	3300022730	Rhizosphere	MKNNAMAISVRTRIICGAIAIMTIILSMGGNAIAQTKSTAVVKNIIIVNGGLADGPAGPEDGGARR
Ga0224572_10304332	3300024225	Rhizosphere	MKNNAMAMGVKTRIIYGALAIMTIILSIGENAMAQTKSTAVVKNIMIIHGGLVDGSGRT
Ga0224564_10912881	3300024271	Soil	MKNDAMAISVRTRIICGARAILTIILSIGENAIAQTKSTAVVKNIMIIHGGLVDGSG
Ga0208821_10203981	3300025432	Peatland	MKNNATAIGVRTRIIFCVLAIMTIMLGIGENTMAQTNTTTVVKNIVLVHGGF
Ga0208034_10625922	3300025442	Peatland	MKNNATAMGVRTRIIYCVLAIMTIMLGIGENTMAQTN
Ga0208455_10474191	3300025453	Peatland	MKNNATAIGVRTRIIFCVLAIMTIMLGIGENTMAQTNTTTV
Ga0207646_109196202	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKNNAIPMGVRTRIIYGAMAIMTILLSIGENTMAQTKSTAVVK
Ga0207700_118655751	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKAMAIGVRTRISYCALAIMTIILSVGENTMAQTKSTAV
Ga0207664_102405051	3300025929	Agricultural Soil	MKNNAMPISVRTRSIYGVVAIITIMLGIGENTMAQTKSTAAVKNIVLV
Ga0207665_111628351	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKNNAMPISVRTRPIYGALATITIMLGIGDNTMAQTKSTAVVKNIVLVHGGLVDG
Ga0257178_10594171	3300026446	Soil	MKNNAMAMGVRTRVIYGAMAIMTIILSMGENTMGQTKSTTVVKNIVIVHGGLVDGSGWEA
Ga0257177_10769131	3300026480	Soil	MKNNAMAIGVRTRIIYGALAIMTIMLGIGENTMAQTKSTT
Ga0257155_10626461	3300026481	Soil	MKNNAMAIGVRTRIIYGALAIMTIILSMGENTMAQT
Ga0257172_10114353	3300026482	Soil	MKSNAMAIGVRTRIIYGALAIMTIMLGIGENTMAQTKSTTAVKNIV
Ga0257158_11347971	3300026515	Soil	MKNNAMAIGVRTRIIYGALAIMTIILSMGENTMAQTK
Ga0209648_100397721	3300026551	Grasslands Soil	MKNNAIPMGVRTRIIYGAMAIMTILLSIGENTMAQTKSTAVVKNIV
Ga0209648_100553651	3300026551	Grasslands Soil	MKNSAIPMGVRTRIIYGAMAIMTILLSVGENTMAQTKS
Ga0179587_103358462	3300026557	Vadose Zone Soil	MKNNAIPMGVRTRIIYGAMAIMTILLSIGENTMAQTKSTAV
Ga0208210_1001932	3300026683	Soil	MKNNAIPMGVRTRIIYGAMAIMTIILCIGENAMAQTISTAVVKNIVIVHGGLVDGSGWQ
Ga0208098_10126271	3300027172	Forest Soil	MKNNAMAIGVRTRIIYCAMAIMTIILSMGENTMAQTKSTAVVKNIVLVHGGLV
Ga0209523_10369362	3300027548	Forest Soil	MKNNAIPMGVRTRIIYGAMAIMTIILCIGENAMAQTKST
Ga0209528_11181182	3300027610	Forest Soil	MKSNAMAIGVRTRIIYGVLAIMTIMLGIGENTMAQTKSTTVVRNIV
Ga0209422_10653042	3300027629	Forest Soil	MKNNAMAIGVRTRIIYCAMAIMTIILSMGENTMAQTKSTAVVKNIVLVH
Ga0209736_10729391	3300027660	Forest Soil	MKNNAMAIGVRTRIIYSALAIMTIILSIGENTMAQTKSTAVVKNIV
Ga0209139_102703121	3300027795	Bog Forest Soil	MKNNGMGMGVRTRIIYGAIAIMTILLSIGENTMAQTKSTAVVKNIVLVHGGLVDGSGWEG
Ga0209274_103310422	3300027853	Soil	MKNNAMAISVRARIICGARAIMTIILSIGENAIAQTKSAAVVNIMIVHGGLVDGSGTT
Ga0209693_101812772	3300027855	Soil	MKNNAMAIGVRTRINYGAMAIMTIILSMGENTMAQT
Ga0209283_108295812	3300027875	Vadose Zone Soil	MKNNAMAIGVRTRIIYGALAIITIILSMGENTMAQTKS
Ga0209380_104869651	3300027889	Soil	MKSKAMAVGVRTRISYCALAIMTTILSVGENTMAQTKSTTVVKNI
Ga0209624_111305002	3300027895	Forest Soil	MKNNAMAIGVRTRIVCGALAIMTIILITGENTMAQTKSTTVV
Ga0209006_112482741	3300027908	Forest Soil	MKNNAMAMGVRTRIIYGAMVIMTILSSIGEHTMAQTKSTTVVRNIVIVHGGLVDGSG
Ga0209698_101357201	3300027911	Watersheds	MKNNAMAIGVRTRIIYCAMAIMTIILSMGENTMAQTKSTAVVKNIVLVHGGLVDGSGWKD
Ga0209698_101750721	3300027911	Watersheds	MKNNANPIGVGTRISALALMTVMLGTGENTMAQTNTSTHVKNI
Ga0209698_101750731	3300027911	Watersheds	MKNNANPIGVRTRISALALMTVMLGTGENTMAQTNTSTHVKNI
Ga0209698_107375831	3300027911	Watersheds	MKSKAMAIGVRTRISYCALAIMTIILSVGENTMAQTKSTAVVKNIVLVHGGLVDGSGWKD
Ga0265356_10190742	3300028017	Rhizosphere	MRNNAMAIGVRTRIICGAMAIMTIILSIGENAIAQTKSTAVVKNIMIVHGGLVDGS
Ga0302233_103275122	3300028746	Palsa	MKNNAMAIGVRTRIIYCAMAIMTIILSMGENTMAQTKSTAVVKNIV
Ga0311353_103311572	3300030399	Palsa	MKSKAMAIGVRTRISHCALAIMTIILSVGENTMAQTKSTAVVKNIVLVHGGLVDGSG
Ga0311357_100415111	3300030524	Palsa	MKNNAMAIGVRTRIIYCAMAIMTIILSMGENTMAQTKSTAVVKNIVLVHGG
Ga0265746_10658091	3300030815	Soil	MKNNAMAIGVRTRIIYCAMAIMSIIPSMRENTMAQTKSTAVVKNIVLVHGGLVDGSGWKD
Ga0265753_10114201	3300030862	Soil	MKNNAMAIGVRTRIIYGAMAIMTIILSMGENTMAQTKSTTVVKNIVLVHGGLV
Ga0170834_1136608302	3300031057	Forest Soil	MKNNAVAMGVKTRIIYSVLAIMTIILSIGENTMAQTKS
Ga0265760_100433752	3300031090	Soil	MKNNAMAISVRTRIICGAMAIMTIILSIGENAIAQTKSTAVVKNIMIVHGGLVDGSGTT
Ga0170822_136609251	3300031122	Forest Soil	MKSKAMAIGVRTRISYWALAIMTIILSVGENTMAQTKSTAVVKN
Ga0170824_1115762712	3300031231	Forest Soil	MKSKTMAIGVRTRISYCALAIMTIILSVGENTMAQTKS
Ga0170820_123514962	3300031446	Forest Soil	MKNNAMAIGGRTRIVYGVMAIMTIILSMGENTMAQRTSATVVKNIVLVHGGLLDGS
Ga0310686_1050672442	3300031708	Soil	MKNNAMAISVRTRIICGAMAIMTIILSIGENAIAQTKSTAVVKNIMIVNGGLVDGPGRT
Ga0310686_1167736801	3300031708	Soil	MKNNAMAISVRTRIICGAMAIMTIILSIGENAMAQTKSTAVVKNI
Ga0307476_1000208412	3300031715	Hardwood Forest Soil	MKSKAMAIGVRTRIGYCALAIMTIILSVGENTMAQTKSTAVVKNIVL
Ga0307476_109934142	3300031715	Hardwood Forest Soil	MKNNAIPMGVGTRIIYGAMAIMTILLSIGDNTMAQTKSTAVVKNI
Ga0307477_102328951	3300031753	Hardwood Forest Soil	MKNKAIPMAVRKRIIHGAMGIMTILLSIGENTMAQTKST
Ga0307477_108866232	3300031753	Hardwood Forest Soil	MKNNAMAIGVRTRIICGALAITTIILSMGENTMAQT
Ga0307477_110462211	3300031753	Hardwood Forest Soil	MKNNAIAIGVRTRFIYGVLAIMTIMSGIGENTMAQTKSTAVVKNIVLVHGGLVDGSGWE
Ga0307475_104297123	3300031754	Hardwood Forest Soil	MKNNAIPMGVRTRIIYGAMAIMTILLSIGENTMAQTKSTAVVKNIVLVHGGLVDGSGWEA
Ga0307475_113232081	3300031754	Hardwood Forest Soil	MKNNAMAIGVRTRIICGALAITTIILSMGENTMAQTKSTTVVRNIVIVHGGLVDGSGWEA
Ga0307473_102814841	3300031820	Hardwood Forest Soil	MKNKAMAIGVRTRSIYGVLAIMTILLSIGENTMAQTKSTAVVKNIVLV
Ga0307478_100699211	3300031823	Hardwood Forest Soil	MKNNAIPMGVRTRIIYGAMAIMTIILCIGENAMAQTKSTAVVKNIVIVHGGL
Ga0307479_102691313	3300031962	Hardwood Forest Soil	MNNAIPMGVRTRIIYGAIAIMTIILCIGENAMAQTKSTAVVK
Ga0307479_104853263	3300031962	Hardwood Forest Soil	MKNNAIPMGVRARIIYGAMAIMTIILCIGENAMAQTKSTAVVKNIVIVHGGLV
Ga0307471_1005571243	3300032180	Hardwood Forest Soil	MKNNAMAIGVRTRIIYGALAIMTIILSIGENTMAQTKSTAVVKNIVLVHGGLVDGSGW
Ga0307471_1012155391	3300032180	Hardwood Forest Soil	MKNNAIPMGVRTRIIYGAMAIMTILCIGGNTMAQTKSRAVV
Ga0348332_114483812	3300032515	Plant Litter	MKNDAMAISVRTRIICGARAILTIILSIGENAIAQTKSTAVVKNIMIVHGGLVDGSGTT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051427

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences