Metagenome / Metatranscriptome Family F051171

Basic Information
Family ID	F051171
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	84 residues
Representative Sequence	MLKRSVIVASVLAIGFVLGFGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFGGHRAKALELVKQAEG
Number of Associated Samples	111
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil (13.194 % of family members)
Environment Ontology (ENVO)	Unclassified (28.472 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.306 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 66.04% β-sheet: 0.00% Coil/Unstructured: 33.96%
Feature Viewer

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Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF13561	adh_short_C2	65.28
PF00106	adh_short	11.81
PF01261	AP_endonuc_2	9.03
PF12570	DUF3750	3.47
PF02776	TPP_enzyme_N	1.39
PF01717	Meth_synt_2	1.39
PF00501	AMP-binding	0.69
PF13458	Peripla_BP_6	0.69
PF12399	BCA_ABC_TP_C	0.69
PF06240	COXG	0.69
PF00005	ABC_tran	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	1.39
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	0.69

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.42%
Host-Associated	Host-Associated	14.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.03%
Plants	Host-Associated → Plants	14.58%
Aquatic	Environmental → Aquatic	1.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.78%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Sediment	Environmental → Aquatic → Sediment	0.69%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.89%
Loam	Environmental → Terrestrial → Soil → Loam	13.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.72%
Sand	Environmental → Terrestrial → Soil → Sand	5.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.39%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.94%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.47%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.56%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.47%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.08%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.39%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.39%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.69%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000564	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1014758951	3300000559	Soil	MLKCRVIVAGAIGCVLGVGTLASSQDSKPPTATRAGLHKLYAASKALEDAHRHLERAEHQFGGHRAKALELVK
RepKanNP_BrdU_F12BDRAFT_10059932	3300000564	Soil	MLKRKVIVAAAIGCVLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEEAHRHLERAEHNFGGHRAKALELVKQAEAEVKEAVAFAKATPPAAPPAAKQ*
JGI25383J37093_100287251	3300002560	Grasslands Soil	MLKRSVTAALVLAVGFVLGFVTLAFTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHYFGGHRAKALELVKQASGELKQAMEFAKANPPSGAKAATGTTPATSAPPAPAKQ*
JGI25383J37093_100926991	3300002560	Grasslands Soil	MLKQXVFVAVVLAIGCVLVLGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAHRHLERAEHHFGGHRVKALDLVKLAEAEVKEAVAFAKANPPEGS
JGI25384J37096_100326181	3300002561	Grasslands Soil	MLKRSVTAALVLAVGFVLGFVTLASTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHHFGGHRAKALELVKQASGELKQAMEFAKANPPSGAKAATGTTPATSAPPAPAKQ*
JGI25384J37096_100821191	3300002561	Grasslands Soil	MLKQSVFVAVVLAIGCVLVLGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAHRHLERAEHHFGGHRVKALDLVKLAE
JGI25382J37095_100655153	3300002562	Grasslands Soil	MLKRSVTAALVLAVGFVLGFVTLASTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHHFGGHRAKALELVKQASGELKQA
JGI25382J43887_100095862	3300002908	Grasslands Soil	MLKRSVTAALVLAVGFVLGFVTLASTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHHFGGHRAKALELVKQASGELKQAMEFAKANPPSGAKAATGTTPATSAPPAPPKQ*
Ga0066396_100858591	3300004267	Tropical Forest Soil	MLKRRVIVAGAIGCVLGAGTLASSQDSKPPTATRPGLHKLYAASKALEDAHRHLERAEHDFGGHRSKALELVKQAEAEVKEAVAFAKATPPAASPAAKQ*
Ga0066395_106737071	3300004633	Tropical Forest Soil	IVAGAIGCVLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEDARRHLEPAEHQFGGHRAKALELVKQAEAEVKEAVAFAKATPPPAAAPAAKQ*
Ga0066677_101501182	3300005171	Soil	MLKRSVIVASVLAIGFVLGFGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFGGHRAKALELVKQAEGELKQAV
Ga0066680_100491533	3300005174	Soil	MLKRSVTAALVLAVGFVLGFVTLAFTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHYFGGHRAKALELVKQASGELKQAMEFAKANPPSGAKAATGTTPATSAPPAPPKQ*
Ga0066685_100092223	3300005180	Soil	MLKRNVIVIVVLALGFVLGYGTLAFTQDKKQGAPPLRQIHAAAKALEQAQNQLEKAEYHFGGHRAKALELVKQAEGELKQAVEYAKATAAPVAPATPAPKP*
Ga0066678_102835852	3300005181	Soil	MLKRRVIVASAIGCVLGLGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELVKQAEAELKEAVTYAKSTPPAAPPAAKP*
Ga0066678_111348622	3300005181	Soil	MLKRSVFVATVLAIGCVVGLGTLASPQDKKPAPATRAGLHQIHAAARALEQAHRHLERAEHHFGGHRAKALDLVKQAEAE
Ga0065705_108319812	3300005294	Switchgrass Rhizosphere	MLKRSVIVAVVLAIGFVLGFGTQAFTQDKKPAEKKPPTTRSGLYLIHAAAKSLEDAQRH
Ga0065707_107901852	3300005295	Switchgrass Rhizosphere	MLRRSVIIAGVLAIGFVLGLGTQAFTQDKKPAEKKPPTTRSGLYRIHAAARSLEDAERHLQRAEAFGGHPARALELVKQAEGEL
Ga0066388_1012909942	3300005332	Tropical Forest Soil	MLKRRVIVAGAIGCVLGAGTLASSQDSKPPTATRPGLHKLYAASKALEDAHRHLERAEHDFGGHRSKALELVKQAEAEVKEAVAFAKATPPPAAKQ*
Ga0066388_1038691002	3300005332	Tropical Forest Soil	MLRRSVIIAGVLVIGFVLGLGTQAFTQDKKPAEKKPPTTRSGLYRIHAAARSLEDAERHLKGAEQAYDGHRERALDLVKQAQGELKQAVEYAKANPPAPAKPSTSTPAPATGATPGTKP*
Ga0066388_1039680511	3300005332	Tropical Forest Soil	MLKRSGMVAGALAIGLVLGFGTLAFTQEKKPPATRAGLHLIHAAAKSLEDAEKHLTRTEHQFGGHRTKALELVKQAEAELKQAVEYAKANPPAPGKPASGSAPASTAPATP
Ga0068869_1011310602	3300005334	Miscanthus Rhizosphere	MLKRSVVVASMLAIGVVLGFGTLAFTQEKKPPATRTGLHLIHAAAKALEDAEKHLQRAEHHFGGHRAKALELVKQ
Ga0070703_103448412	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MLKRSVIVAGVLAIGFVLGFGTLAFTQDKKPAVPATRAGLYRIHAAAKSLEDAERHLQRSEHHFGGHRTKALELVK
Ga0070694_1005217522	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MLKRRLIVAGAIGCVLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEDARRHLERAEQQFGGHRAKAL
Ga0066686_100236055	3300005446	Soil	MLKRNVIVIVVLALGFVLGYGTLAFTQDKKQGAPPLRQIHAAAKALEQAQNQLEKAEYHFGGHRAKALELVKQAEGELKQAVEYAKAT
Ga0070706_1013465752	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLKRSVTAALVLAVGFVLGFVTLASTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHHFGGHRAK
Ga0066697_100013966	3300005540	Soil	MLKRNVIVIVVLALGFVLGYGTLAFTQDKKQGAPPLRQIHAAAKALEQAQNQLEKAEYHFGGHRAKALELVKQAEGELKQAVEYAKATAAPVAPATPAPKQ*
Ga0066691_100102115	3300005586	Soil	MLKRNVIVIVVLALGFVLGDGTLAFTQDQKQGAPPLRQIHAAAKALEQAQNHLEKAEHHFGEHRAKALELVKQAEGELKQAVEYAKATAAPVAPATPAPKQ*
Ga0066706_101662243	3300005598	Soil	MLKQSVFVAVVLAIGCVLVLGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAHRHLERAEHHFGGHRVKAL
Ga0066905_1000786193	3300005713	Tropical Forest Soil	MLKRRLIVTGAIGCVLGVGTLASSQDTKPPTATRAGLHKIYAAGKALEDARRHLERTEQQFGGHRAKALELVKQAEAEVKEAVAFAKATPPPAAAPAAKQ*
Ga0066905_1007893001	3300005713	Tropical Forest Soil	MLRRAVIVTVVLALGFVLGLGTQAFTQDKKPAEKRPPTTRTGLYRIHAAARSVEDAERHLQRAEQAFGGHRAK
Ga0066905_1013931742	3300005713	Tropical Forest Soil	MLKQSAIIASVLAIGFVLGFGTLAFTQEKKPPATRAGLHLIHAAGKSLEDADKHLTRAEHHFGGHRAKALELVKQAEAEVKQAVE
Ga0066903_1001214075	3300005764	Tropical Forest Soil	MLKRRLIVAGAIGCVLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEDARRHLEPAEHQFGGHRAKALELVKQAEAEVKEAVAFAKATPPPAAAPAAKQ*
Ga0081455_103845601	3300005937	Tabebuia Heterophylla Rhizosphere	MLKRNVTIVVVLVLGFVLGWGTLAFTQDKEKKGAPLLRPIHAAARALEQAENHLQKTEHHFGGHRAKALDLVKQAEGELKQAVEYAKA
Ga0068871_1006774662	3300006358	Miscanthus Rhizosphere	MLKRSVIVAGVLAIGFVLGVGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFGGHRTKALEL
Ga0075431_1011798771	3300006847	Populus Rhizosphere	MLKRRLIVAGAIGCVLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEDARRHLERAEQQFGGHRAKALE
Ga0075425_1002863123	3300006854	Populus Rhizosphere	MLKRSVIVAGVLAVGFVLGVGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFG
Ga0075425_1023103862	3300006854	Populus Rhizosphere	MLKRRLIVAGAIGCVLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEDARRHLERAEQQFGGHRAKALELVKQAEAEVKE
Ga0068865_1002654513	3300006881	Miscanthus Rhizosphere	MLKRSVVVASMLAIGVVLGFGTLAFTQEKKPPATRTGLHLIHAAAKALEDAEKHLQRAEHHFG
Ga0075426_105488721	3300006903	Populus Rhizosphere	MLKRSVIVAGVLAVGFVLGAGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFGGHRVKALELVKQAEDELK
Ga0075424_1000664325	3300006904	Populus Rhizosphere	MLKRSVIVASVLAIGFVLGVGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFG
Ga0075435_1002204373	3300007076	Populus Rhizosphere	MLKRSVIVASVLAIGFVLGFGTLAFTQEKKPPATRTGLHLIHAAAKALEDAEKHLQRAEHHFGGHRAKALE
Ga0075435_1004215081	3300007076	Populus Rhizosphere	MLKRSVIVAGVLAVGFVLGVGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFGGHRVKALELVKQAEDELKQAVEYAKANPPTPSKPASS
Ga0075435_1007136412	3300007076	Populus Rhizosphere	MLKRRLIVAGAIGCILGVGTLASSQDKKPPTATRAGLHKIYAAGKALEDARRHLEPAEHQFGGHRAKALELVKQAEAEVKEAVAFAKASPPPAAAPAAKQ*
Ga0075435_1019947002	3300007076	Populus Rhizosphere	MLKRSVIVASVLAIGFVLGVGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFGG
Ga0066710_1001136972	3300009012	Grasslands Soil	MLKRRVIVASAIGCVLGLGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELVKQAEAELKEAVVYAKSTPPAAPPAAKP
Ga0066709_1000048821	3300009137	Grasslands Soil	MKYGSPEERMLKRSVTAALVLAVGFVLGFVTLAFTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHYFGGHRAKALELVKQASGELKQAMEFAKANPPSGAKAATGTTPATSAPPAPAKQ*
Ga0114129_119510662	3300009147	Populus Rhizosphere	MLKRSVIVASVLAIGFVLGLGTLAFTQEKKQTATRTGLHLIHAAAKSLEDAEKHLTRAEHHF
Ga0114129_131286251	3300009147	Populus Rhizosphere	MLKRSVIVAGVLAVGFVLGAGTLAFTQEKKPPATRTGLHLIHAAAKALEDAEKHLQRAEHHFGGH
Ga0105249_117404341	3300009553	Switchgrass Rhizosphere	MLKRSVVVASMLAIGFVLGFGTLAFTQEKKPPATRTGLHLIHAAAKALEDAEKHLQRAEHHF
Ga0105072_10456952	3300009818	Groundwater Sand	LLKQSVFVAVVLAIGCVLGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAQRHLERAEHPFGGHRAKALDLVKQAEAE
Ga0105058_11766492	3300009837	Groundwater Sand	MVKRSVIVAIVLGFGFVLGFSTLAFTQDRPPATRAGLHQIHAAAKALEQAKRHLERAEHPFGGHRLKALDLVKQAE
Ga0126380_122357051	3300010043	Tropical Forest Soil	MLKRRVIVAAAIGCVLGAGTLASSQDSKPPTATRPGLHKLYAASKALEDAHRHLERAEHPFGGHRAKALELVK
Ga0126384_102683012	3300010046	Tropical Forest Soil	MLKRRVIVAAAIGCVLGAGTLASSQDSKPPTATRPGLHKLYAASKALEDAHRHLERAEHDFGGHRGKALELVKQAEAEVKEAVAFAKATPPAASPAAKQ*
Ga0126384_124610652	3300010046	Tropical Forest Soil	MLKRSGMVAGALAIGFVLGFGTLAFTQEKKPPATRAGLHLIHAAAKSLEDAEKHLTRTEHQFGGHRTKALELVKQAEAELKQ
Ga0134111_101043362	3300010329	Grasslands Soil	MLKRRVIVASAIGCVLGLGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELVKQAE
Ga0134071_100384114	3300010336	Grasslands Soil	MLKRSAIVASVLAIGFVLGFGTLAFTQEKKPPATRAGLHLIHAAAKSLEDAEKHLTRAEH
Ga0134071_101231012	3300010336	Grasslands Soil	MLKRSVFVAVVLAIGCFLGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAHRHLERAEHHFGGHRVKALDLVKLAEAEVKEAVAFAKANPPEGSKPAP
Ga0126370_117792722	3300010358	Tropical Forest Soil	MLKRRLIVAGAIGCVLGVGTLASSQDKKAATATRAGLHKIYAAGKALEDARRHLERAEQQFGGHRAKALELVK
Ga0126372_103705462	3300010360	Tropical Forest Soil	LRRSNDFHQEDWMVKRRVIVAGAIGCVLGAGTLASSQDSKPPTATRPGLHKLYAASKALEDAHRHLERAEHDFGGHRSKALELVKQAEAEVKEAVAFAKATPPAAKQ*
Ga0126378_106404301	3300010361	Tropical Forest Soil	MLKRSAIVASVLAIGFVLGFGTLAFTQEKKPPATRAGLHLIHAAAKSLEDADKHLTRAEH
Ga0126377_109191392	3300010362	Tropical Forest Soil	MLKRRVIVAAAIGCVLGAGTLASSQDSKPPTATRPGLHKLYAASKALEDAHRHLERAEQPFGGHRA
Ga0126377_117125022	3300010362	Tropical Forest Soil	MLKRRLIVAGAIGCVLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEDARRHLERAEQQFGGHRAKALELVKQAEAEVK
Ga0126381_1042454972	3300010376	Tropical Forest Soil	MLKRGGMVAGVLAIGFVLGFGTLAFTQEKKPATRAGLHLIHAAAKSLEDADKHLTRAEHHFGGHRAKALELVKQAEDEVKQA
Ga0126383_101763754	3300010398	Tropical Forest Soil	MLKRRVIVAGAIGCVLGAGTLASSQDSKPPTATRPGLHKLYAASKALEDAHRHLERAEHDFGGHRAK
Ga0134127_101587281	3300010399	Terrestrial Soil	MLKRSVVVASMLAIGFVLGFGTLAFTQEKKPPATRTGLHLIHAAAKALEDAEKHLQRAEHHFGGHRAKA
Ga0134123_126466801	3300010403	Terrestrial Soil	MLKRSVIVAGVLAIGFVLGVGTLAFTQEKKPTATRAGLHLIHAAAKSIEDAEKHLQRAEHHFGGHRTKALELVKQAEEELKQAVEYAKANPP
Ga0137381_104264202	3300012207	Vadose Zone Soil	MLKRNVTVIVVLALGFVLGYGTLAFTQDKKQGQPLLRPIHAAAKALEQAQNHLEKAEHHFGGHRAKALELVKQAEGELKQAVEYAKATAAPVAPATPAPKQ*
Ga0137387_103626302	3300012349	Vadose Zone Soil	MLKRRVIVASAIGCVLALGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELVKQAEAELKEAVTYAKSTPPAAPPAAKP*
Ga0137368_100036659	3300012358	Vadose Zone Soil	MLKRSVFVAVVLAIGCILGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAQRHLERAEHPFGGHRTKALDLVKQAEAEVKEAVAFAKANPPEGSKPAPAAAPATTKP*
Ga0137397_107122382	3300012685	Vadose Zone Soil	MLKRSVMVAGVLAIGFVLGFVTLAFTQDKKPPVPATRAGLHRIHAAAKSLEDADRHLQRAEHHFGGH
Ga0137396_105393682	3300012918	Vadose Zone Soil	VRRSQMLKRNVTVVVVLALGFVLGYGTLAFTQDKKQGAPPLRQIHAAAKALEQAENHLQKAEHHFGGHRAKALELVKQAEGELKQAV
Ga0137396_105719682	3300012918	Vadose Zone Soil	MLKQSVFVAVVLAIGCVLVLGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAHRHLERAEHHFGGHRVKALDLVKQAEAEVKEAVAFAKANPPEGSKPASAATSASGTTPP
Ga0137394_113795882	3300012922	Vadose Zone Soil	MLKRRVIVASAIGCVLALGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELVKQAEAELKEAVVYAKSTPPAAPPAAKP*
Ga0137419_115694082	3300012925	Vadose Zone Soil	MLKRRVIVASAIGCVLALGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELVKQAEAELKEAVVYAKSTPPA
Ga0137404_109359842	3300012929	Vadose Zone Soil	MLKRRVIVASAIGCVLGLGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELVKQAEA
Ga0137407_122215932	3300012930	Vadose Zone Soil	MLKRSVIVAGVLAIGFVLGFGTLAFTQDKKPAVPATRAGLYRIHAAAKSLEDAERHLQRSEHHFGGHRAKALELVKQAEG
Ga0137410_100070462	3300012944	Vadose Zone Soil	MLKRRVIVASALGCVLALGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELVKQAEAELKEAVVYAKSTPPAAPPAAKP*
Ga0126369_134254602	3300012971	Tropical Forest Soil	MLKRSAIVASVLAIGCVLGVGTLAFTQEKKPPATRAGLHLIHAAAKSLEDADKHLTRAEHHFGGHRAKALDLVKQAE
Ga0134077_100542471	3300012972	Grasslands Soil	MLKRRVIVASAIGCVRGLGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALEL
Ga0134077_102934742	3300012972	Grasslands Soil	MKYGSPEERMLKRSVTAALVLAVGFVLGFVTLAFTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHYFGGHRAKALELVKQANGELKQAMEFAKANPPSGAKAATGTTPAT
Ga0134076_100634943	3300012976	Grasslands Soil	MLKRSVIVAGVLAIGFVLGFGTLAFTQDKKPAVPATRAGLYRIHAAAKSLEDAERHLQRSEHHFGGHRAKALELVKQAEGE
Ga0134076_103276391	3300012976	Grasslands Soil	MKYGSPEERMLKRSVTAALVLAVGFVLGFVTLAFTQDKPPATRAGLHQIYAAAKSLEETQRHLERAE
Ga0157376_111213362	3300014969	Miscanthus Rhizosphere	MLKRSVIVAGVLAIGFVLGVGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFGGHRTKALELVK
Ga0120098_10170571	3300015170	Fossill	MVKRSVIVAIVLGIGFVLGFSTLAFTQDRPPATRAGLHQIHAAAKALEQAKRHLERAEHRFGGHRVKALDLVKQAEDEVQQAVAYAKA
Ga0137418_104950042	3300015241	Vadose Zone Soil	MLKRRVIVASAIGCVLGLGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELVKQAEAELKEAVVYAKSTPPAAPPAAKP*
Ga0134085_100911211	3300015359	Grasslands Soil	MLKRNVIVIVVLALGFVLGDGTLAFTQDKKQGAPPLRQIHAAARALELAQNHLEKAEHHFGGHRAKALDLVKQAEGELKQAV
Ga0132257_1043554642	3300015373	Arabidopsis Rhizosphere	MLKRSVIVASVLAIGFVLGFGTLAFTQEKKPPTTRTGLHLIHAAAKALEDAEKHLQRAEHHFGG
Ga0187786_102580192	3300017944	Tropical Peatland	MLKRGVIVASALAVGFVLGFGTLAFTQEKKPPTTRAGLHLIHAAAKSLEDADKHLTRAEHPFGGHRAKALELVKQAEGEVKEAV
Ga0184629_102301202	3300018084	Groundwater Sediment	MLKQSVFVAVVLAIGCVLGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAQRHLERAEHHFGGHRAKALDLVKQ
Ga0066655_100169545	3300018431	Grasslands Soil	MLKRNVIVIVVLALGFVLGYGTLAFTQDKKQGAPPLRQIHAAAKALEQAQNQLEKAEYHFGGHRAKALELVKQAEGELKQAVEYAKATAAPVAPATPAPKP
Ga0066655_103088092	3300018431	Grasslands Soil	MLKRSAIVASVLAIGFVLGFGTLAFTQEKKPPATRAGLHLIHAAAKSLEDAAKHLTRAKPHFCGHRAKALDLVDQAQAGLQPAAEYAKANPPAPATKQ
Ga0066662_101975543	3300018468	Grasslands Soil	MLKRSVMVAGVLAIGFVLGFGTLAFTQDKKPGVPATRAGLSRIHAATKSLEDAERHLQRSEHHFGG
Ga0066662_107870802	3300018468	Grasslands Soil	MLKRSVTAALVLAVGFVLGFVTLASTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHYFGGHRAKALELVKQASGELKQAMEFAKANPPSGAKAATGTTPATSAPPAPAKQ
Ga0184646_10476171	3300019259	Groundwater Sediment	MLKQSVFVAVVLAIGCVLGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAQRHLERAEHHFGGHRAKALDLVKQAEAE
Ga0137408_12626772	3300019789	Vadose Zone Soil	MLKRRVIVASAIGCVLGLGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFG
Ga0137408_13439373	3300019789	Vadose Zone Soil	MLKRRVIVASAIGCVLGLGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELV
Ga0137408_13522273	3300019789	Vadose Zone Soil	MLKRRVIVASAIGCVLGLGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALE
Ga0179596_105745761	3300021086	Vadose Zone Soil	MLKRSVVVASVLAIGFVLGFGTLAFTQEKRPPTTRTGLHLIHAAAKALEDAEKHLQRAEHHFGGHRA
Ga0207684_109662831	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLKRSVTAALVLAVGFVLGFVTLASTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHHFGGHRAKAL
Ga0207646_100973074	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MLKRSVIVAGVLAIGFVLGFGTLAFTQDKKPAVPATRAGLYRIHAAAKSLEDAERHLQRSEHHFGG
Ga0207686_112958972	3300025934	Miscanthus Rhizosphere	MLKRSVVVASMLAIGFVLGFGTLAFTQEKKPPATRTGLHLIHAAAKALEDAEKHLQRAEH
Ga0207691_111875041	3300025940	Miscanthus Rhizosphere	MLKRRLIVAGAIGCVLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEDARRHLERAEQQFGGHRAKALELVKQAEAEV
Ga0207708_103285601	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MLKRSVVVASMLAIGVVLRFGTLAFTQEKKPPATRTGLHLIHAAAKALEDAEKHLQRAEHHFGGHRAKALELV
Ga0209438_11538491	3300026285	Grasslands Soil	MLKRSVIVASVLAIGFVLGLGTLAFTQEKKQTATRTGLHLIHAASKSLEDAEKHLTRAEHHFGGHR
Ga0209235_10370112	3300026296	Grasslands Soil	MLKRSVTAALVLAVGFVLGFVTLAFTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHYFGGHRAKALELVKQASGELKQAMEFAKANPPSGAKAATGTTPATSAPPAPAKQ
Ga0209237_100101612	3300026297	Grasslands Soil	MLKRSVTAALVLAVGFVLGFVTLASTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHHFGGHRAKALELVKQASGELKQAMEFAKANPPSGAKAATGTTPATSAPPAPPKQ
Ga0209237_11993102	3300026297	Grasslands Soil	LAVGFVLGFVTLAFTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHYFGGHRAKALELVKQASGELKQAMEFAKANPPSGAKAATGTTPATSAPPAPAKQ
Ga0209236_10732243	3300026298	Grasslands Soil	MLKRSVTAALVLAVGFVLGFVTLASTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHHFGGHRAKALELVKQASGELKQAMEFAKANPPSGAKAATGTT
Ga0209236_11979652	3300026298	Grasslands Soil	MIREERMLKRSVFVATVLAIGCVVGLGTLASPQDKKPAPATRAGLHQIHAAARALEQAHRHLERAEHHFGGHRVKALDLVKLAEAEVKEAVAFA
Ga0209239_11028951	3300026310	Grasslands Soil	MLKRSVIVASVLAIGFVLGFGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFGGHRAKALELVKQAEGELK
Ga0209802_12198302	3300026328	Soil	MLKRSVTAALVLAVGFVLGFVTLAFTQDKPPATRAGLHQIYAAAKSLEETQRHLERAEHYFGGHRAKALELVKQASG
Ga0209158_13322732	3300026333	Soil	ASAIGCVLGLGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALELVKQAEAELKEAVTYAKSTPPAAPPAAKP
Ga0257170_10286822	3300026351	Soil	MLKQSVFVAVVLAIGCVLGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAQRHLERAEHHFGGHRAKALDLVKLADAEVKE
Ga0209058_10382604	3300026536	Soil	MLKRSVIVASVLAIGFVLGFGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFGGHRAKALELVKQAEG
Ga0209376_100226915	3300026540	Soil	MLKRNVIVIVVLALGFVLGYGTLAFTQDKKQGAPPLRQIHAAAKALEQAQNQLEKAEYHFGGHRAKALELVKQAEGELKQAVEYAKATTAPVAPATPAPKP
Ga0209161_101473723	3300026548	Soil	MLKQSVFVAVVLAIGCVLVLGLGTLASSQDKKPPTATRAGLHQIHAAARALEQAHRHLERAEHHFGGHRVKALDLVKLAEAEVKEAVAFAKANPPEGSKP
Ga0209161_103775642	3300026548	Soil	MLKRSVIVASVLAIGFVLGFGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLQRAEHHFGGHRAKALELVKQAEGELKQ
Ga0209897_10084421	3300027169	Groundwater Sand	MLKRSVIVAAVLGLVLGLSTLAFTQERRPPTTRAGLHQIHAAAKALEQAKRHLERAEHKFGGHRVKALDLVKQAEEEVKQAVEYAKANPPATPAPAAKP
Ga0209845_10347381	3300027324	Groundwater Sand	MVKRSIIVAIVLGFGFVLGFSTLAFTQDRPPATRAGLHQIHAAAKALEQAKRHLER
Ga0209854_10447561	3300027384	Groundwater Sand	MVKRSIIVAIVLGFGFVLGFSTLAFTQDRPPATRAGLHQIHAAAKALEQAKRHLERAEHPFGGHRLKALDLVKQAEDEVK
Ga0209874_10687222	3300027577	Groundwater Sand	MVKRSVIVAIVLGFGFVLGFSTLAFTQDRPPATRAGLHQIHAAAKAFEQAKRHLERAEHPFGGHRLKALDLVKQAEDEVKQA
Ga0209388_10270063	3300027655	Vadose Zone Soil	MLKRRVIVASAIGCVLALGTLASSQDSKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGH
Ga0209465_103985982	3300027874	Tropical Forest Soil	MLKRRLIVAGAIGCVLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEDARRHLEPAEHQFGGHRAKALELVKQAEAEVKEAVAFAKATPPPAAAPAAKQ
Ga0209860_10572142	3300027949	Groundwater Sand	MLKRSVIVAAVLGLVLGLSTLAFTQERRPPTTRAGLHQIHAAAKALEQAKRHLERAEHKFGGHR
(restricted) Ga0255310_100134603	3300031197	Sandy Soil	MLKRSVIVAGVLAIGFVLGFGTLAFTQDKKPAVPATRAGLHLIHAAAKSLEDADRHLQRAEHHFGGHRAKALDLVKQAE
Ga0318534_108260572	3300031544	Soil	MLKRSGMVAGVLAIGFVLGFGTLAFTQEKKPATRAGLHLIHAAAKSLEDAEKHLTRAEHHFGGHRTKALE
Ga0310887_102202931	3300031547	Soil	MLRRSVIIAGVLAIGFVLGLGTQAFTQDKKPAEKKPPTTRSGLYRIHAAARSLEDAERHLQRAEAFGGHPARALELVKQAEGELKQAVEYAKANPPAPAPAKPSTS
Ga0307469_101337963	3300031720	Hardwood Forest Soil	MLKRRVIVAGAIGCLLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEEAHRHLERAEHHFGGHRAKALELVKQAEAEVKEAVAFAKATPPAAAPAAKQ
Ga0307473_103653062	3300031820	Hardwood Forest Soil	MLKRSAVVASVLAIGFVLGFGTLAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLTRA
Ga0307473_109383822	3300031820	Hardwood Forest Soil	MLKRRLIVAGAIGCVLGVGTLASSQDKKPPTATRAGLHKIYAAGKALEDARRHLEPAEHQFGGHRAKALELVKQAEAEVKEAVAFAKASPPPAAAPAAKQ
Ga0307473_109422592	3300031820	Hardwood Forest Soil	MLKRSVIVASVLAIGFVLGLGTLAFTQEKKQTATRTGLHLIHAAAKSLEDAEKHLTRA
Ga0310900_103478573	3300031908	Soil	MLKRSVIVASVLAIGFVLGFGTLAFTQEKKPPTTRTGLHLIHAAAKALEDAERHLQRAEH
Ga0310900_106601541	3300031908	Soil	MLRRSVIIAGVLAIGFVLGLGTQAFTQDKKPAEKKPPTTRAGLYRIHAAARSLEDAERHLQRAEAFGGHPARALELVKQAEGELKQAV
Ga0310895_105196982	3300032122	Soil	MLRRSVIIAGVLAIGFVLGLGTQAFTQDKKPAEKKPPTTRSGLYRIHAAARSLEDAERHLQRAEAFGGHPARA
Ga0307470_104880162	3300032174	Hardwood Forest Soil	MLKRSVIVASVLASGFVLGFGTLAFTQEKKPPATRTGLHLIHAAAKALEDAEKHLQRAEQHFG
Ga0307470_110004911	3300032174	Hardwood Forest Soil	MLKRRLIVAGAIGCVLAVGTLASSQDTKPPTATRAGLHKIYAASKALEDAHRHLERAEHHFGGHRAKALE
Ga0307471_1004339592	3300032180	Hardwood Forest Soil	MRSVIVASVLAIGFVLGFGTQAFTQEKKPTATRAGLHLIHAAAKSLEDAEKHLTRAEHHFGGHRSKALELVKQAEGELKQAVEYAKANPPAPATKQ
Ga0307471_1014323061	3300032180	Hardwood Forest Soil	MLKRSVIVASVLAIGFVLGFGTLAFTQEKKPPATRTGLHLIHAAAKALEDAEKHLQRAEHHFGGHRAKALELVKQ
Ga0307471_1021595292	3300032180	Hardwood Forest Soil	MLKRNVTVIVVLALGFVLGYGTLAFTQDKKQQGAHVLRPIHSAARALEQAESHLQKAEYHFGGHRAKALDLVKQAEGELKQAVEYAKANAPAAKSGTTTAPAPAATPPATTTP
Ga0307471_1024776431	3300032180	Hardwood Forest Soil	MLKRNVTVVVVLALGFVLGYGTLAYTQDKKQGGAPLLRPIHAAARALEQAENHLQKAEHHFGGHRAMALELVKQAEGELKQAVEYAKTNTPAGGKPGTATAP
Ga0307471_1037933441	3300032180	Hardwood Forest Soil	RRSNDFIREERMLKRRVIVAAAIGCVFGVGTLASSQDKKPPTATRAGLHKIYAAGKALEEAHRHLERAEHNFGGHRAKALELVKQAEAEVKEAVAFAKATPPAAPPAAKQ
Ga0306920_1006537071	3300032261	Soil	MLKRSGMVAGVLAIGFVLGFGTLAFTQEKKPATRAGLHLIHAAAKSLEDADKHLTRAEHHFGGH
Ga0314793_142342_1_192	3300034668	Soil	MLRRSVIIAGVLAIGFVLGLGTQAFTQDKKPAERKPPTTRSGLYRIHAAARSLEDAERHLQRAE
Ga0373958_0047640_702_896	3300034819	Rhizosphere Soil	MLRRSVIIAGVLAIGFVLGLGTQAFTQDKKPAEKKPPTTRSGLYRIHAAARSLEDAERHLQRAET

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051171

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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